Aldehyde dehydrogenase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G23800 AT1G23800 |
| fragaria_vesca | FvH4_4g34660 FvH4_4g34660 FvH4_4g34660 FvH4_4g34660 FvH4_4g34660 FvH4_4g34660 FvH4_4g34660 FvH4_4g34660 FvH4_4g34660 FvH4_4g34660 FvH4_4g34660 FvH4_4g34660 FvH4_4g34660 FvH4_4g34660 |
| malus_domestica | MD13G1090600.v1.1 MD13G1090800.v1.1 |
| prunus_persica | Prupe.1G255200_v2.0.a1 Prupe.1G255200_v2.0.a1 |
| pyrus_communis | pycom13g07880 pycom13g07910 |
| rosa_chinensis | RchiOBHm_Chr4g0444001 |
| rosa_laevigata | RLG00000005868 |
| rosa_multiflora | Rmu_sc0015522.1_g000013 |
| rosa_roxburghii | Rroxscaffold_5G00384570 |
| rosa_rugosa | Rorug04G0348900 |
| rosa_samantha | Rh4AG409500 Rh4BG420600 Rh4CG434800 Rh4DG415600 |
| rosa_wichuraiana | Rw4G035190 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 694 |
| Acc36I | ACCTGC | 1 cut(s) | 575 |
| AccB1I | GGYRCC | 1 cut(s) | 127 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 539 |
| AccII | CGCG | 1 cut(s) | 1369 |
| AciI | CCGC | 5 cut(s) | 301, 367, 506, 909, 1438 |
| AclWI | GGATC | 3 cut(s) | 841, 1091, 1150 |
| AcoI | YGGCCR | 1 cut(s) | 326 |
| AcsI | RAATTY | 1 cut(s) | 604 |
| AcuI | CTGAAG | 4 cut(s) | 279, 291, 480, 692 |
| AcvI | CACGTG | 1 cut(s) | 1430 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AfaI | GTAC | 6 cut(s) | 465, 491, 858, 1021, 1166, 1502 |
| AfeI | AGCGCT | 1 cut(s) | 792 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 233, 234, 539, 782, 1106, 1342, 1496 |
| AflII | CTTAAG | 1 cut(s) | 884 |
| AflIII | ACRYGT | 1 cut(s) | 1427 |
| AgsI | TTSAA | 4 cut(s) | 386, 443, 1105, 1324 |
| AjnI | CCWGG | 1 cut(s) | 742 |
| AluBI | AGCT | 5 cut(s) | 341, 536, 904, 964, 1193 |
| AluI | AGCT | 5 cut(s) | 341, 536, 904, 964, 1193 |
| Alw26I | GTCTC | 5 cut(s) | 12, 22, 36, 410, 527 |
| AlwI | GGATC | 3 cut(s) | 841, 1091, 1150 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 293 |
| Aor51HI | AGCGCT | 1 cut(s) | 792 |
| AoxI | GGCC | 3 cut(s) | 306, 326, 1068 |
| ApaI | GGGCCC | 1 cut(s) | 1072 |
| ApeKI | GCWGC | 8 cut(s) | 194, 296, 449, 788, 869, 1002, 1382, 1481 |
| ApoI | RAATTY | 1 cut(s) | 604 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 880, 912 |
| AseI | ATTAAT | 1 cut(s) | 174 |
| AspLEI | GCGC | 2 cut(s) | 640, 793 |
| AspS9I | GGNCC | 9 cut(s) | 223, 320, 358, 773, 1068, 1069, 1124, 1304, 1333 |
| AsuHPI | GGTGA | 2 cut(s) | 1106, 1357 |
| AvaII | GGWCC | 7 cut(s) | 223, 320, 358, 773, 1124, 1304, 1333 |
| AxyI | CCTNAGG | 1 cut(s) | 1160 |
| BaeGI | GKGCMC | 1 cut(s) | 1072 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 447, 480 |
| BalI | TGGCCA | 1 cut(s) | 328 |
| BanI | GGYRCC | 1 cut(s) | 127 |
| BanII | GRGCYC | 1 cut(s) | 1072 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1345, 1377 |
| BbrPI | CACGTG | 1 cut(s) | 1430 |
| BbsI | GAAGAC | 3 cut(s) | 66, 680, 1384 |
| BbvI | GCAGC | 8 cut(s) | 206, 283, 436, 800, 856, 989, 1369, 1468 |
| BccI | CCATC | 3 cut(s) | 148, 533, 1325 |
| BciT130I | CCWGG | 1 cut(s) | 744 |
| BcoDI | GTCTC | 5 cut(s) | 12, 22, 36, 410, 527 |
| BfaI | CTAG | 2 cut(s) | 87, 860 |
| BfmI | CTRYAG | 3 cut(s) | 63, 573, 1383 |
| BfoI | RGCGCY | 1 cut(s) | 794 |
| BfrI | CTTAAG | 1 cut(s) | 884 |
| BfuAI | ACCTGC | 1 cut(s) | 575 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 305 |
| BisI | GCNGC | 8 cut(s) | 195, 297, 450, 789, 870, 1003, 1383, 1482 |
| BlsI | GCNGC | 8 cut(s) | 196, 298, 451, 790, 871, 1004, 1384, 1483 |
| BmcAI | AGTACT | 1 cut(s) | 858 |
| Bme1390I | CCNGG | 1 cut(s) | 744 |
| Bme18I | GGWCC | 7 cut(s) | 223, 320, 358, 773, 1124, 1304, 1333 |
| BmgT120I | GGNCC | 9 cut(s) | 223, 320, 358, 773, 1068, 1069, 1124, 1304, 1333 |
| BmiI | GGNNCC | 4 cut(s) | 129, 225, 359, 1070 |
| BmrFI | CCNGG | 1 cut(s) | 744 |
| BmrI | ACTGGG | 1 cut(s) | 243 |
| BmsI | GCATC | 5 cut(s) | 103, 181, 206, 928, 1468 |
| BmuI | ACTGGG | 1 cut(s) | 243 |
| BpiI | GAAGAC | 3 cut(s) | 66, 680, 1384 |
| BpmI | CTGGAG | 2 cut(s) | 726, 1227 |
| Bpu10I | CCTNAGC | 1 cut(s) | 646 |
| BpuEI | CTTGAG | 1 cut(s) | 434 |
| BsaAI | YACGTR | 1 cut(s) | 1430 |
| BsaBI | GATNNNNATC | 1 cut(s) | 279 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| BsaI | GGTCTC | 2 cut(s) | 22, 527 |
| BsaJI | CCNNGG | 2 cut(s) | 323, 599 |
| BsaWI | WCCGGW | 1 cut(s) | 486 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 233, 234, 539, 782, 1106, 1342, 1496 |
| Bse118I | RCCGGY | 2 cut(s) | 782, 845 |
| Bse1I | ACTGG | 5 cut(s) | 238, 835, 1203, 1210, 1307 |
| Bse21I | CCTNAGG | 1 cut(s) | 1160 |
| Bse3DI | GCAATG | 1 cut(s) | 1433 |
| Bse8I | GATNNNNATC | 1 cut(s) | 279 |
| BseBI | CCWGG | 1 cut(s) | 744 |
| BseDI | CCNNGG | 2 cut(s) | 323, 599 |
| BseGI | GGATG | 4 cut(s) | 140, 943, 1276, 1297 |
| BseJI | GATNNNNATC | 1 cut(s) | 279 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 233, 234, 539, 782, 1106, 1342, 1496 |
| BseMI | GCAATG | 1 cut(s) | 1433 |
| BseMII | CTCAG | 3 cut(s) | 1068, 1142, 1151 |
| BseNI | ACTGG | 5 cut(s) | 238, 835, 1203, 1210, 1307 |
| BseRI | GAGGAG | 1 cut(s) | 1224 |
| BseSI | GKGCMC | 1 cut(s) | 1072 |
| BseXI | GCAGC | 8 cut(s) | 206, 283, 436, 800, 856, 989, 1369, 1468 |
| BsgI | GTGCAG | 2 cut(s) | 807, 1331 |
| Bsh1236I | CGCG | 1 cut(s) | 1369 |
| BshFI | GGCC | 3 cut(s) | 308, 328, 1070 |
| BshNI | GGYRCC | 1 cut(s) | 127 |
| BsiSI | CCGG | 3 cut(s) | 487, 783, 846 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 233, 234, 539, 782, 1106, 1342, 1496 |
| BsmAI | GTCTC | 5 cut(s) | 12, 22, 36, 410, 527 |
| BsmBI | CGTCTC | 1 cut(s) | 12 |
| BsnI | GGCC | 3 cut(s) | 308, 328, 1070 |
| Bso31I | GGTCTC | 2 cut(s) | 22, 527 |
| Bsp120I | GGGCCC | 1 cut(s) | 1068 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1072 |
| Bsp143I | GATC | 4 cut(s) | 350, 833, 1096, 1155 |
| Bsp19I | CCATGG | 2 cut(s) | 323, 599 |
| BspACI | CCGC | 5 cut(s) | 301, 367, 506, 909, 1438 |
| BspANI | GGCC | 3 cut(s) | 308, 328, 1070 |
| BspCNI | CTCAG | 3 cut(s) | 1069, 1141, 1152 |
| BspFNI | CGCG | 1 cut(s) | 1369 |
| BspLI | GGNNCC | 4 cut(s) | 129, 225, 359, 1070 |
| BspMAI | CTGCAG | 2 cut(s) | 67, 1387 |
| BspMI | ACCTGC | 1 cut(s) | 575 |
| BspPI | GGATC | 3 cut(s) | 841, 1091, 1150 |
| BspT107I | GGYRCC | 1 cut(s) | 127 |
| BspTI | CTTAAG | 1 cut(s) | 884 |
| BspTNI | GGTCTC | 2 cut(s) | 22, 527 |
| BsrDI | GCAATG | 1 cut(s) | 1433 |
| BsrFI | RCCGGY | 2 cut(s) | 782, 845 |
| BsrI | ACTGG | 5 cut(s) | 238, 835, 1203, 1210, 1307 |
| BssAI | RCCGGY | 2 cut(s) | 782, 845 |
| BssECI | CCNNGG | 2 cut(s) | 323, 599 |
| BssMI | GATC | 4 cut(s) | 350, 833, 1096, 1155 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| BssT1I | CCWWGG | 2 cut(s) | 323, 599 |
| Bst2UI | CCWGG | 1 cut(s) | 744 |
| Bst4CI | ACNGT | 4 cut(s) | 529, 664, 892, 1252 |
| Bst6I | CTCTTC | 3 cut(s) | 25, 618, 1516 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstAFI | CTTAAG | 1 cut(s) | 884 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 293, 562, 974 |
| BstBAI | YACGTR | 1 cut(s) | 1430 |
| BstC8I | GCNNGC | 4 cut(s) | 301, 642, 966, 1380 |
| BstDEI | CTNAG | 4 cut(s) | 646, 1077, 1128, 1160 |
| BstDSI | CCRYGG | 2 cut(s) | 323, 599 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1340, 1494 |
| BstF5I | GGATG | 4 cut(s) | 140, 943, 1276, 1297 |
| BstFNI | CGCG | 1 cut(s) | 1369 |
| BstH2I | RGCGCY | 1 cut(s) | 794 |
| BstHHI | GCGC | 2 cut(s) | 640, 793 |
| BstKTI | GATC | 4 cut(s) | 353, 836, 1099, 1158 |
| BstMAI | GTCTC | 5 cut(s) | 12, 22, 36, 410, 527 |
| BstMBI | GATC | 4 cut(s) | 350, 833, 1096, 1155 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 254, 293, 305, 503, 562, 788, 974, 1375 |
| BstNI | CCWGG | 1 cut(s) | 744 |
| BstNSI | RCATGY | 2 cut(s) | 654, 1279 |
| BstSCI | CCNGG | 1 cut(s) | 742 |
| BstSFI | CTRYAG | 3 cut(s) | 63, 573, 1383 |
| BstSLI | GKGCMC | 1 cut(s) | 1072 |
| BstUI | CGCG | 1 cut(s) | 1369 |
| BstV1I | GCAGC | 8 cut(s) | 206, 283, 436, 800, 856, 989, 1369, 1468 |
| BstV2I | GAAGAC | 3 cut(s) | 66, 680, 1384 |
| BstX2I | RGATCY | 1 cut(s) | 1155 |
| BstYI | RGATCY | 1 cut(s) | 1155 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1160 |
| BsuRI | GGCC | 3 cut(s) | 308, 328, 1070 |
| BtgI | CCRYGG | 2 cut(s) | 323, 599 |
| BtsCI | GGATG | 4 cut(s) | 140, 943, 1276, 1297 |
| BtsIMutI | CAGTG | 4 cut(s) | 108, 1196, 1248, 1314 |
| BveI | ACCTGC | 1 cut(s) | 575 |
| Cac8I | GCNNGC | 4 cut(s) | 301, 642, 966, 1380 |
| CaiI | CAGNNNCTG | 1 cut(s) | 293 |
| CfoI | GCGC | 2 cut(s) | 640, 793 |
| Cfr10I | RCCGGY | 2 cut(s) | 782, 845 |
| Cfr13I | GGNCC | 9 cut(s) | 223, 320, 358, 773, 1068, 1069, 1124, 1304, 1333 |
| Csp6I | GTAC | 6 cut(s) | 464, 490, 857, 1020, 1165, 1501 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1492, 1527 |
| CviQI | GTAC | 6 cut(s) | 464, 490, 857, 1020, 1165, 1501 |
| DdeI | CTNAG | 4 cut(s) | 646, 1077, 1128, 1160 |
| DpnI | GATC | 4 cut(s) | 352, 835, 1098, 1157 |
| DpnII | GATC | 4 cut(s) | 350, 833, 1096, 1155 |
| DraI | TTTAAA | 1 cut(s) | 753 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 694 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 694 |
| EaeI | YGGCCR | 1 cut(s) | 326 |
| Eam1104I | CTCTTC | 3 cut(s) | 25, 618, 1516 |
| EarI | CTCTTC | 3 cut(s) | 25, 618, 1516 |
| Eco130I | CCWWGG | 2 cut(s) | 323, 599 |
| Eco147I | AGGCCT | 1 cut(s) | 308 |
| Eco24I | GRGCYC | 1 cut(s) | 1072 |
| Eco31I | GGTCTC | 2 cut(s) | 22, 527 |
| Eco47I | GGWCC | 7 cut(s) | 223, 320, 358, 773, 1124, 1304, 1333 |
| Eco47III | AGCGCT | 1 cut(s) | 792 |
| Eco57I | CTGAAG | 4 cut(s) | 279, 291, 480, 692 |
| Eco72I | CACGTG | 1 cut(s) | 1430 |
| Eco81I | CCTNAGG | 1 cut(s) | 1160 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1340, 1494 |
| EcoO109I | RGGNCCY | 4 cut(s) | 358, 1068, 1124, 1333 |
| EcoRII | CCWGG | 1 cut(s) | 742 |
| EcoT14I | CCWWGG | 2 cut(s) | 323, 599 |
| EcoT38I | GRGCYC | 1 cut(s) | 1072 |
| ErhI | CCWWGG | 2 cut(s) | 323, 599 |
| Esp3I | CGTCTC | 1 cut(s) | 12 |
| FauI | CCCGC | 3 cut(s) | 308, 902, 1431 |
| FauNDI | CATATG | 1 cut(s) | 804 |
| Fnu4HI | GCNGC | 8 cut(s) | 195, 297, 450, 789, 870, 1003, 1383, 1482 |
| FokI | GGATG | 4 cut(s) | 127, 950, 1283, 1304 |
| FriOI | GRGCYC | 1 cut(s) | 1072 |
| Fsp4HI | GCNGC | 8 cut(s) | 195, 297, 450, 789, 870, 1003, 1383, 1482 |
| FspBI | CTAG | 2 cut(s) | 87, 860 |
| GlaI | GCGC | 2 cut(s) | 639, 792 |
| GluI | GCNGC | 8 cut(s) | 195, 297, 450, 789, 870, 1003, 1383, 1482 |
| GsuI | CTGGAG | 2 cut(s) | 726, 1227 |
| HaeII | RGCGCY | 1 cut(s) | 794 |
| HaeIII | GGCC | 3 cut(s) | 308, 328, 1070 |
| HapII | CCGG | 3 cut(s) | 487, 783, 846 |
| HhaI | GCGC | 2 cut(s) | 640, 793 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| Hin6I | GCGC | 2 cut(s) | 638, 791 |
| HinP1I | GCGC | 2 cut(s) | 638, 791 |
| HinfI | GANTC | 3 cut(s) | 266, 514, 1136 |
| HpaII | CCGG | 3 cut(s) | 487, 783, 846 |
| HphI | GGTGA | 2 cut(s) | 1106, 1357 |
| Hpy166II | GTNNAC | 1 cut(s) | 1514 |
| Hpy188I | TCNGA | 6 cut(s) | 12, 271, 591, 672, 1131, 1141 |
| Hpy188III | TCNNGA | 2 cut(s) | 1159, 1321 |
| Hpy8I | GTNNAC | 1 cut(s) | 1514 |
| HpyAV | CCTTC | 4 cut(s) | 254, 311, 625, 1347 |
| HpyCH4III | ACNGT | 4 cut(s) | 529, 664, 892, 1252 |
| HpyCH4IV | ACGT | 1 cut(s) | 1429 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 254, 293, 305, 503, 562, 788, 974, 1375 |
| HpyF3I | CTNAG | 4 cut(s) | 646, 1077, 1128, 1160 |
| HpySE526I | ACGT | 1 cut(s) | 1429 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| HspAI | GCGC | 2 cut(s) | 638, 791 |
| Kzo9I | GATC | 4 cut(s) | 350, 833, 1096, 1155 |
| LmnI | GCTCC | 2 cut(s) | 901, 1190 |
| Lsp1109I | GCAGC | 8 cut(s) | 206, 283, 436, 800, 856, 989, 1369, 1468 |
| LweI | GCATC | 5 cut(s) | 103, 181, 206, 928, 1468 |
| MaeI | CTAG | 2 cut(s) | 87, 860 |
| MaeII | ACGT | 1 cut(s) | 1429 |
| MaeIII | GTNAC | 2 cut(s) | 892, 1573 |
| MalI | GATC | 4 cut(s) | 352, 835, 1098, 1157 |
| MboI | GATC | 4 cut(s) | 350, 833, 1096, 1155 |
| MboII | GAAGA | 9 cut(s) | 12, 66, 69, 284, 605, 685, 1165, 1384, 1533 |
| MflI | RGATCY | 1 cut(s) | 1155 |
| MhlI | GDGCHC | 1 cut(s) | 1072 |
| MlsI | TGGCCA | 1 cut(s) | 328 |
| MluNI | TGGCCA | 1 cut(s) | 328 |
| MmeI | TCCRAC | 1 cut(s) | 800 |
| Mox20I | TGGCCA | 1 cut(s) | 328 |
| MscI | TGGCCA | 1 cut(s) | 328 |
| MseI | TTAA | 9 cut(s) | 147, 174, 752, 885, 987, 1182, 1242, 1266, 1563 |
| MslI | CAYNNNNRTG | 1 cut(s) | 396 |
| Msp20I | TGGCCA | 1 cut(s) | 328 |
| MspA1I | CMGCKG | 1 cut(s) | 536 |
| MspCI | CTTAAG | 1 cut(s) | 884 |
| MspI | CCGG | 3 cut(s) | 487, 783, 846 |
| MspR9I | CCNGG | 1 cut(s) | 744 |
| MvaI | CCWGG | 1 cut(s) | 744 |
| MvnI | CGCG | 1 cut(s) | 1369 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 254, 293, 305, 503, 562, 788, 974, 1375 |
| NcoI | CCATGG | 2 cut(s) | 323, 599 |
| NdeI | CATATG | 1 cut(s) | 804 |
| NdeII | GATC | 4 cut(s) | 350, 833, 1096, 1155 |
| NlaIV | GGNNCC | 4 cut(s) | 129, 225, 359, 1070 |
| NmeAIII | GCCGAG | 1 cut(s) | 142 |
| NmuCI | GTSAC | 1 cut(s) | 1573 |
| NspI | RCATGY | 2 cut(s) | 654, 1279 |
| PceI | AGGCCT | 1 cut(s) | 308 |
| PfeI | GAWTC | 3 cut(s) | 266, 514, 1136 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 539 |
| PkrI | GCNGC | 8 cut(s) | 196, 298, 451, 790, 871, 1004, 1384, 1483 |
| PmaCI | CACGTG | 1 cut(s) | 1430 |
| PmlI | CACGTG | 1 cut(s) | 1430 |
| Ppu21I | YACGTR | 1 cut(s) | 1430 |
| PpuMI | RGGWCCY | 3 cut(s) | 358, 1124, 1333 |
| PshBI | ATTAAT | 1 cut(s) | 174 |
| Psp5II | RGGWCCY | 3 cut(s) | 358, 1124, 1333 |
| Psp6I | CCWGG | 1 cut(s) | 742 |
| PspCI | CACGTG | 1 cut(s) | 1430 |
| PspGI | CCWGG | 1 cut(s) | 742 |
| PspN4I | GGNNCC | 4 cut(s) | 129, 225, 359, 1070 |
| PspOMI | GGGCCC | 1 cut(s) | 1068 |
| PspPI | GGNCC | 9 cut(s) | 223, 320, 358, 773, 1068, 1069, 1124, 1304, 1333 |
| PspPPI | RGGWCCY | 3 cut(s) | 358, 1124, 1333 |
| PstI | CTGCAG | 2 cut(s) | 67, 1387 |
| PstNI | CAGNNNCTG | 1 cut(s) | 293 |
| PsuI | RGATCY | 1 cut(s) | 1155 |
| PvuII | CAGCTG | 1 cut(s) | 536 |
| RsaI | GTAC | 6 cut(s) | 465, 491, 858, 1021, 1166, 1502 |
| RsaNI | GTAC | 6 cut(s) | 464, 490, 857, 1020, 1165, 1501 |
| RseI | CAYNNNNRTG | 1 cut(s) | 396 |
| SaqAI | TTAA | 9 cut(s) | 147, 174, 752, 885, 987, 1182, 1242, 1266, 1563 |
| SatI | GCNGC | 8 cut(s) | 195, 297, 450, 789, 870, 1003, 1383, 1482 |
| Sau3AI | GATC | 4 cut(s) | 350, 833, 1096, 1155 |
| Sau96I | GGNCC | 9 cut(s) | 223, 320, 358, 773, 1068, 1069, 1124, 1304, 1333 |
| ScaI | AGTACT | 1 cut(s) | 858 |
| ScrFI | CCNGG | 1 cut(s) | 744 |
| SduI | GDGCHC | 1 cut(s) | 1072 |
| SfaNI | GCATC | 5 cut(s) | 103, 181, 206, 928, 1468 |
| SfcI | CTRYAG | 3 cut(s) | 63, 573, 1383 |
| SinI | GGWCC | 7 cut(s) | 223, 320, 358, 773, 1124, 1304, 1333 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 396 |
| SmlI | CTYRAG | 2 cut(s) | 413, 884 |
| SmoI | CTYRAG | 2 cut(s) | 413, 884 |
| SseBI | AGGCCT | 1 cut(s) | 308 |
| SsiI | CCGC | 5 cut(s) | 301, 367, 506, 909, 1438 |
| SspMI | CTAG | 2 cut(s) | 87, 860 |
| StuI | AGGCCT | 1 cut(s) | 308 |
| StyD4I | CCNGG | 1 cut(s) | 742 |
| StyI | CCWWGG | 2 cut(s) | 323, 599 |
| TaaI | ACNGT | 4 cut(s) | 529, 664, 892, 1252 |
| TaiI | ACGT | 1 cut(s) | 1432 |
| TatI | WGTACW | 1 cut(s) | 856 |
| TfiI | GAWTC | 3 cut(s) | 266, 514, 1136 |
| Tru1I | TTAA | 9 cut(s) | 147, 174, 752, 885, 987, 1182, 1242, 1266, 1563 |
| Tru9I | TTAA | 9 cut(s) | 147, 174, 752, 885, 987, 1182, 1242, 1266, 1563 |
| TscAI | CASTG | 4 cut(s) | 115, 1203, 1255, 1314 |
| TseFI | GTSAC | 1 cut(s) | 1573 |
| TseI | GCWGC | 8 cut(s) | 194, 296, 449, 788, 869, 1002, 1382, 1481 |
| Tsp45I | GTSAC | 1 cut(s) | 1573 |
| TspDTI | ATGAA | 9 cut(s) | 27, 108, 330, 360, 414, 506, 582, 1042, 1047 |
| TspGWI | ACGGA | 1 cut(s) | 133 |
| TspRI | CASTG | 4 cut(s) | 115, 1203, 1255, 1314 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 539 |
| Vha464I | CTTAAG | 1 cut(s) | 884 |
| VpaK11BI | GGWCC | 7 cut(s) | 223, 320, 358, 773, 1124, 1304, 1333 |
| VspI | ATTAAT | 1 cut(s) | 174 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1340, 1494 |
| XapI | RAATTY | 1 cut(s) | 604 |
| XceI | RCATGY | 2 cut(s) | 654, 1279 |
| XspI | CTAG | 2 cut(s) | 87, 860 |
| ZrmI | AGTACT | 1 cut(s) | 858 |