Rmu_sc0015522.1_g000013

Aldehyde dehydrogenase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0015522.1
Physical Location & Seq
Forward (+)
46924 .. 51036
4113 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0015522.1_g000013.1.cds

Sequence Viewer

Length: 1611 bp
atggctgctcggaggctctcatctctgttgtctcgttccttcacttctgcttcttccttttctaaagggaggccttcttctgtaagtagaggaatcggtaaatatagcactgctgctgccgctgctgctgaggacccaatcattccacctgttaaagtagattacactaagcttctgattaatggacagtttgtagatgcagcgtcagaaaaaacatttcccacattggaccctcggactggggacgtgattgctcatgttgctgaaggtgatgctgaagatgtaaatcgggcagttgctgctgctagaaaagcatttgacgaaggaccatggccaaagatgacagcatatgaaagatctcgggtccttttccgctttgctgatttgattgagaagcataatgacgaactagcggcacttgagagttgggataatgggaagccatttgaacaatctgctaaaattgagataccaatgctcgcacgtttctttcggtattatgctggatatgcggataagattcatggtctcactgttccagccgatggacaatatcatgtgcaaaccttgcatgaacctataggtgttgcaggtcagattattccatggaacttccctcttctcatgtttgcttggaaggttgcacctgctctagcatgtggcaacaccattgttctgaagacagccgagcagacaccattgtctgctctctatgcagcacagctgttgcatgaggccggactgcctccaggtgctttgaatgtagtttctggttttggtccaactgtaggtgccgcagttgctagtcatatggacatcgataaggttgcttttactggatcaactgatactggtaaaattgtacttgaactggctgctaaaagcaatcttaagtcagtaactttggagcttggtggcaaatctccattcattgtatgtgaggatgctgatgtagacaaggctgttgagttggcacattctgctctattctttaatcagggacaatgttgctgtgctggttctcgtacttttgtacatgaacgtgtgtatgatgagtttgtagagaaagcaaaggcacgtgctgcgagacgtgtagttggtgatccattcaaggggggcattgagcaaggtcctcagattgattcagaccaatttgagaagatcctgaagtacattgattatggtattaaaggtggagcgacactggaaacaggaggagaacgatttggctcaaaaggttactatattcaacccactgtattctcaaatgtgaaggatgacatgcggatagcaaaggatgagatctttggtccagtgcagactgtcctgaaatacaaggaacttgatgaggtgataaagagggcaaacaattcgcgctatggccttgctgcaggggtctttacacagaacatagatactgcaaacacattgacacgtgcattgcgggttggtagtgtatggatcaactgctatgatgtgtttgatgcttccattccttttggaggatacaagatgagtggaaatggaagagaaaagggcatttacggcctcaaaaattacttgcaagtcaaggctgttgtcacgcccctcaaaaatccagcatggctgtag

Protein Analysis

536

Amino Acids

58.21

Weight (kDa)

7.6

Isoelectric Point (pI)

27.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 655
AasI GACNNNNNNGTC 1 cut(s) 700
Acc36I ACCTGC 2 cut(s) 581, 655
AccB1I GGYRCC 1 cut(s) 791
AccB7I CCANNNNNTGG 1 cut(s) 545
AccI GTMKAC 1 cut(s) 954
AccII CGCG 1 cut(s) 1375
AciI CCGC 7 cut(s) 120, 373, 413, 512, 795, 1285, 1444
AclWI GGATC 4 cut(s) 847, 1097, 1156, 1469
AcoI YGGCCR 1 cut(s) 332
AcuI CTGAAG 4 cut(s) 285, 297, 698, 1187
AcvI CACGTG 2 cut(s) 1079, 1436
AfaI GTAC 4 cut(s) 864, 1027, 1035, 1172
AfiI CCNNNNNNNGG 5 cut(s) 239, 545, 788, 1112, 1502
AflII CTTAAG 1 cut(s) 890
AflIII ACRYGT 3 cut(s) 1042, 1090, 1433
AgsI TTSAA 5 cut(s) 449, 760, 869, 1111, 1250
AjiI CACGTC 2 cut(s) 247, 1091
AjnI CCWGG 1 cut(s) 748
AluBI AGCT 3 cut(s) 172, 724, 910
AluI AGCT 3 cut(s) 172, 724, 910
Alw26I GTCTC 3 cut(s) 36, 533, 1081
AlwI GGATC 4 cut(s) 847, 1097, 1156, 1469
AlwNI CAGNNNCTG 1 cut(s) 299
Ama87I CYCGRG 1 cut(s) 360
AoxI GGCC 5 cut(s) 71, 332, 735, 1381, 1546
AseI ATTAAT 1 cut(s) 180
AspLEI GCGC 1 cut(s) 1377
AspS9I GGNCC 7 cut(s) 133, 229, 326, 364, 779, 1130, 1310
AsuHPI GGTGA 3 cut(s) 281, 1112, 1363
AvaI CYCGRG 1 cut(s) 360
AvaII GGWCC 7 cut(s) 133, 229, 326, 364, 779, 1130, 1310
BalI TGGCCA 1 cut(s) 334
BanI GGYRCC 1 cut(s) 791
BbrPI CACGTG 2 cut(s) 1079, 1436
BbsI GAAGAC 1 cut(s) 686
BbvCI CCTCAGC 1 cut(s) 129
BccI CCATC 1 cut(s) 539
BceAI ACGGC 1 cut(s) 1561
BcgI CGANNNNNNTGC 4 cut(s) 809, 843, 1353, 1387
BciT130I CCWGG 1 cut(s) 750
BciVI GTATCC 1 cut(s) 1499
BcoDI GTCTC 3 cut(s) 36, 533, 1081
BfaI CTAG 4 cut(s) 306, 410, 653, 804
BfmI CTRYAG 4 cut(s) 579, 786, 1389, 1607
BfrI CTTAAG 1 cut(s) 890
BfuAI ACCTGC 2 cut(s) 581, 655
BfuI GTATCC 1 cut(s) 1499
BglII AGATCT 2 cut(s) 356, 1302
Bme1390I CCNGG 1 cut(s) 750
Bme18I GGWCC 7 cut(s) 133, 229, 326, 364, 779, 1130, 1310
BmeT110I CYCGRG 1 cut(s) 360
BmgBI CACGTC 2 cut(s) 247, 1091
BmgT120I GGNCC 7 cut(s) 133, 229, 326, 364, 779, 1130, 1310
BmiI GGNNCC 4 cut(s) 135, 231, 365, 793
BmrFI CCNGG 1 cut(s) 750
BmrI ACTGGG 1 cut(s) 249
BmsI GCATC 4 cut(s) 187, 262, 934, 1474
BmuI ACTGGG 1 cut(s) 249
BpiI GAAGAC 1 cut(s) 686
BpmI CTGGAG 1 cut(s) 732
Bpu10I CCTNAGC 1 cut(s) 129
BpuEI CTTGAG 1 cut(s) 440
Bsa29I ATCGAT 1 cut(s) 819
BsaAI YACGTR 2 cut(s) 1079, 1436
BsaBI GATNNNNATC 1 cut(s) 285
BsaI GGTCTC 1 cut(s) 533
BsaJI CCNNGG 3 cut(s) 233, 329, 605
Bsc4I CCNNNNNNNGG 5 cut(s) 239, 545, 788, 1112, 1502
Bse1I ACTGG 6 cut(s) 244, 841, 856, 876, 1209, 1313
Bse3DI GCAATG 1 cut(s) 1439
Bse8I GATNNNNATC 1 cut(s) 285
BseBI CCWGG 1 cut(s) 750
BseCI ATCGAT 1 cut(s) 819
BseDI CCNNGG 3 cut(s) 233, 329, 605
BseGI GGATG 3 cut(s) 949, 1282, 1303
BseJI GATNNNNATC 1 cut(s) 285
BseLI CCNNNNNNNGG 5 cut(s) 239, 545, 788, 1112, 1502
BseMI GCAATG 1 cut(s) 1439
BseMII CTCAG 2 cut(s) 120, 1148
BseNI ACTGG 6 cut(s) 244, 841, 856, 876, 1209, 1313
BseRI GAGGAG 1 cut(s) 1230
BsgI GTGCAG 1 cut(s) 1337
Bsh1236I CGCG 1 cut(s) 1375
BshFI GGCC 5 cut(s) 73, 334, 737, 1383, 1548
BshNI GGYRCC 1 cut(s) 791
BshVI ATCGAT 1 cut(s) 819
BsiHKCI CYCGRG 1 cut(s) 360
BsiSI CCGG 1 cut(s) 738
BslFI GGGAC 2 cut(s) 257, 1014
BslI CCNNNNNNNGG 5 cut(s) 239, 545, 788, 1112, 1502
BsmAI GTCTC 3 cut(s) 36, 533, 1081
BsmBI CGTCTC 1 cut(s) 1081
BsmFI GGGAC 2 cut(s) 257, 1014
BsnI GGCC 5 cut(s) 73, 334, 737, 1383, 1548
Bso31I GGTCTC 1 cut(s) 533
BsoBI CYCGRG 1 cut(s) 360
Bsp1407I TGTACA 1 cut(s) 1033
Bsp143I GATC 6 cut(s) 356, 839, 1102, 1161, 1302, 1461
Bsp19I CCATGG 2 cut(s) 329, 605
BspACI CCGC 7 cut(s) 120, 373, 413, 512, 795, 1285, 1444
BspANI GGCC 5 cut(s) 73, 334, 737, 1383, 1548
BspCNI CTCAG 2 cut(s) 121, 1147
BspDI ATCGAT 1 cut(s) 819
BspFNI CGCG 1 cut(s) 1375
BspLI GGNNCC 4 cut(s) 135, 231, 365, 793
BspMAI CTGCAG 1 cut(s) 1393
BspMI ACCTGC 2 cut(s) 581, 655
BspPI GGATC 4 cut(s) 847, 1097, 1156, 1469
BspT107I GGYRCC 1 cut(s) 791
BspTI CTTAAG 1 cut(s) 890
BspTNI GGTCTC 1 cut(s) 533
BsrDI GCAATG 1 cut(s) 1439
BsrGI TGTACA 1 cut(s) 1033
BsrI ACTGG 6 cut(s) 244, 841, 856, 876, 1209, 1313
BssECI CCNNGG 3 cut(s) 233, 329, 605
BssMI GATC 6 cut(s) 356, 839, 1102, 1161, 1302, 1461
BssT1I CCWWGG 2 cut(s) 329, 605
Bst2UI CCWGG 1 cut(s) 750
Bst4CI ACNGT 5 cut(s) 189, 535, 787, 1258, 1324
Bst6I CTCTTC 2 cut(s) 624, 1522
BstAFI CTTAAG 1 cut(s) 890
BstAPI GCANNNNNTGC 4 cut(s) 299, 568, 980, 1082
BstAUI TGTACA 1 cut(s) 1033
BstBAI YACGTR 2 cut(s) 1079, 1436
BstC8I GCNNGC 1 cut(s) 480
BstDEI CTNAG 3 cut(s) 129, 168, 1134
BstDSI CCRYGG 2 cut(s) 329, 605
BstENI CCTNNNNNAGG 1 cut(s) 1500
BstF5I GGATG 3 cut(s) 949, 1282, 1303
BstFNI CGCG 1 cut(s) 1375
BstHHI GCGC 1 cut(s) 1377
BstKTI GATC 6 cut(s) 359, 842, 1105, 1164, 1305, 1464
BstMAI GTCTC 3 cut(s) 36, 533, 1081
BstMBI GATC 6 cut(s) 356, 839, 1102, 1161, 1302, 1461
BstNI CCWGG 1 cut(s) 750
BstNSI RCATGY 2 cut(s) 660, 1285
BstSCI CCNGG 1 cut(s) 748
BstSFI CTRYAG 4 cut(s) 579, 786, 1389, 1607
BstUI CGCG 1 cut(s) 1375
BstV2I GAAGAC 1 cut(s) 686
BstX2I RGATCY 3 cut(s) 356, 1161, 1302
BstYI RGATCY 3 cut(s) 356, 1161, 1302
Bsu15I ATCGAT 1 cut(s) 819
BsuI GTATCC 1 cut(s) 1499
BsuRI GGCC 5 cut(s) 73, 334, 737, 1383, 1548
BsuTUI ATCGAT 1 cut(s) 819
BtgI CCRYGG 2 cut(s) 329, 605
BtrI CACGTC 2 cut(s) 247, 1091
BtsCI GGATG 3 cut(s) 949, 1282, 1303
BtsI GCAGTG 1 cut(s) 108
BtsIMutI CAGTG 5 cut(s) 108, 531, 1202, 1254, 1320
BveI ACCTGC 2 cut(s) 581, 655
Cac8I GCNNGC 1 cut(s) 480
CaiI CAGNNNCTG 1 cut(s) 299
CfoI GCGC 1 cut(s) 1377
Cfr13I GGNCC 7 cut(s) 133, 229, 326, 364, 779, 1130, 1310
ClaI ATCGAT 1 cut(s) 819
CseI GACGC 1 cut(s) 192
Csp6I GTAC 4 cut(s) 863, 1026, 1034, 1171
CspCI CAANNNNNGTGG 2 cut(s) 1498, 1533
CviQI GTAC 4 cut(s) 863, 1026, 1034, 1171
DdeI CTNAG 3 cut(s) 129, 168, 1134
DpnI GATC 6 cut(s) 358, 841, 1104, 1163, 1304, 1463
DpnII GATC 6 cut(s) 356, 839, 1102, 1161, 1302, 1461
DrdI GACNNNNNNGTC 1 cut(s) 700
DseDI GACNNNNNNGTC 1 cut(s) 700
EaeI YGGCCR 1 cut(s) 332
Eam1104I CTCTTC 2 cut(s) 624, 1522
EarI CTCTTC 2 cut(s) 624, 1522
Eco130I CCWWGG 2 cut(s) 329, 605
Eco147I AGGCCT 1 cut(s) 73
Eco31I GGTCTC 1 cut(s) 533
Eco47I GGWCC 7 cut(s) 133, 229, 326, 364, 779, 1130, 1310
Eco57I CTGAAG 4 cut(s) 285, 297, 698, 1187
Eco72I CACGTG 2 cut(s) 1079, 1436
Eco88I CYCGRG 1 cut(s) 360
EcoNI CCTNNNNNAGG 1 cut(s) 1500
EcoO109I RGGNCCY 3 cut(s) 133, 364, 1130
EcoRII CCWGG 1 cut(s) 748
EcoT14I CCWWGG 2 cut(s) 329, 605
ErhI CCWWGG 2 cut(s) 329, 605
Esp3I CGTCTC 1 cut(s) 1081
FaqI GGGAC 2 cut(s) 257, 1014
FauI CCCGC 1 cut(s) 1437
FauNDI CATATG 2 cut(s) 349, 810
FblI GTMKAC 1 cut(s) 954
FokI GGATG 3 cut(s) 956, 1289, 1310
FspBI CTAG 4 cut(s) 306, 410, 653, 804
GlaI GCGC 1 cut(s) 1376
GsuI CTGGAG 1 cut(s) 732
HaeIII GGCC 5 cut(s) 73, 334, 737, 1383, 1548
HapII CCGG 1 cut(s) 738
HgaI GACGC 1 cut(s) 192
HhaI GCGC 1 cut(s) 1377
Hin6I GCGC 1 cut(s) 1375
HinP1I GCGC 1 cut(s) 1375
HindIII AAGCTT 1 cut(s) 170
HinfI GANTC 3 cut(s) 93, 520, 1142
HpaII CCGG 1 cut(s) 738
HphI GGTGA 3 cut(s) 281, 1112, 1363
Hpy166II GTNNAC 1 cut(s) 955
Hpy188I TCNGA 8 cut(s) 12, 177, 208, 237, 597, 678, 1137, 1147
Hpy188III TCNNGA 2 cut(s) 1165, 1327
Hpy8I GTNNAC 1 cut(s) 955
HpyAV CCTTC 6 cut(s) 49, 84, 260, 317, 631, 1267
HpyCH4III ACNGT 5 cut(s) 189, 535, 787, 1258, 1324
HpyCH4IV ACGT 6 cut(s) 246, 484, 1042, 1078, 1090, 1435
HpyF3I CTNAG 3 cut(s) 129, 168, 1134
HpySE526I ACGT 6 cut(s) 246, 484, 1042, 1078, 1090, 1435
HspAI GCGC 1 cut(s) 1375
Kzo9I GATC 6 cut(s) 356, 839, 1102, 1161, 1302, 1461
LmnI GCTCC 2 cut(s) 907, 1196
LweI GCATC 4 cut(s) 187, 262, 934, 1474
MaeI CTAG 4 cut(s) 306, 410, 653, 804
MaeII ACGT 6 cut(s) 246, 484, 1042, 1078, 1090, 1435
MaeIII GTNAC 3 cut(s) 898, 1238, 1579
MalI GATC 6 cut(s) 358, 841, 1104, 1163, 1304, 1463
MboI GATC 6 cut(s) 356, 839, 1102, 1161, 1302, 1461
MboII GAAGA 7 cut(s) 45, 69, 290, 611, 691, 1171, 1539
MflI RGATCY 3 cut(s) 356, 1161, 1302
MlsI TGGCCA 1 cut(s) 334
MluCI AATT 5 cut(s) 462, 858, 1151, 1369, 1555
MluNI TGGCCA 1 cut(s) 334
MmeI TCCRAC 1 cut(s) 806
Mox20I TGGCCA 1 cut(s) 334
MscI TGGCCA 1 cut(s) 334
MseI TTAA 5 cut(s) 153, 180, 891, 993, 1188
MslI CAYNNNNRTG 1 cut(s) 1041
Msp20I TGGCCA 1 cut(s) 334
MspA1I CMGCKG 2 cut(s) 122, 724
MspCI CTTAAG 1 cut(s) 890
MspI CCGG 1 cut(s) 738
MspR9I CCNGG 1 cut(s) 750
MvaI CCWGG 1 cut(s) 750
MvnI CGCG 1 cut(s) 1375
NcoI CCATGG 2 cut(s) 329, 605
NdeI CATATG 2 cut(s) 349, 810
NdeII GATC 6 cut(s) 356, 839, 1102, 1161, 1302, 1461
NlaIV GGNNCC 4 cut(s) 135, 231, 365, 793
NmeAIII GCCGAG 1 cut(s) 712
NmuCI GTSAC 1 cut(s) 1579
NspI RCATGY 2 cut(s) 660, 1285
PaqCI CACCTGC 1 cut(s) 655
PceI AGGCCT 1 cut(s) 73
PfeI GAWTC 3 cut(s) 93, 520, 1142
PflMI CCANNNNNTGG 1 cut(s) 545
PmaCI CACGTG 2 cut(s) 1079, 1436
PmlI CACGTG 2 cut(s) 1079, 1436
Ppu21I YACGTR 2 cut(s) 1079, 1436
PpuMI RGGWCCY 3 cut(s) 133, 364, 1130
PshBI ATTAAT 1 cut(s) 180
Psp5II RGGWCCY 3 cut(s) 133, 364, 1130
Psp6I CCWGG 1 cut(s) 748
PspCI CACGTG 2 cut(s) 1079, 1436
PspGI CCWGG 1 cut(s) 748
PspN4I GGNNCC 4 cut(s) 135, 231, 365, 793
PspPI GGNCC 7 cut(s) 133, 229, 326, 364, 779, 1130, 1310
PspPPI RGGWCCY 3 cut(s) 133, 364, 1130
PstI CTGCAG 1 cut(s) 1393
PstNI CAGNNNCTG 1 cut(s) 299
PsuI RGATCY 3 cut(s) 356, 1161, 1302
PvuII CAGCTG 1 cut(s) 724
RsaI GTAC 4 cut(s) 864, 1027, 1035, 1172
RsaNI GTAC 4 cut(s) 863, 1026, 1034, 1171
RseI CAYNNNNRTG 1 cut(s) 1041
SaqAI TTAA 5 cut(s) 153, 180, 891, 993, 1188
Sau3AI GATC 6 cut(s) 356, 839, 1102, 1161, 1302, 1461
Sau96I GGNCC 7 cut(s) 133, 229, 326, 364, 779, 1130, 1310
ScrFI CCNGG 1 cut(s) 750
SfaNI GCATC 4 cut(s) 187, 262, 934, 1474
SfcI CTRYAG 4 cut(s) 579, 786, 1389, 1607
SinI GGWCC 7 cut(s) 133, 229, 326, 364, 779, 1130, 1310
SmiMI CAYNNNNRTG 1 cut(s) 1041
SmlI CTYRAG 2 cut(s) 419, 890
SmoI CTYRAG 2 cut(s) 419, 890
Sse9I AATT 5 cut(s) 462, 858, 1151, 1369, 1555
SseBI AGGCCT 1 cut(s) 73
SsiI CCGC 7 cut(s) 120, 373, 413, 512, 795, 1285, 1444
SspMI CTAG 4 cut(s) 306, 410, 653, 804
StuI AGGCCT 1 cut(s) 73
StyD4I CCNGG 1 cut(s) 748
StyI CCWWGG 2 cut(s) 329, 605
TaaI ACNGT 5 cut(s) 189, 535, 787, 1258, 1324
TaiI ACGT 6 cut(s) 249, 487, 1045, 1081, 1093, 1438
TaqI TCGA 1 cut(s) 819
TasI AATT 5 cut(s) 462, 858, 1151, 1369, 1555
TatI WGTACW 3 cut(s) 862, 1033, 1170
TauI GCSGC 3 cut(s) 122, 416, 797
TfiI GAWTC 3 cut(s) 93, 520, 1142
Tru1I TTAA 5 cut(s) 153, 180, 891, 993, 1188
Tru9I TTAA 5 cut(s) 153, 180, 891, 993, 1188
TscAI CASTG 5 cut(s) 115, 538, 1209, 1261, 1320
TseFI GTSAC 1 cut(s) 1579
Tsp45I GTSAC 1 cut(s) 1579
TspDTI ATGAA 5 cut(s) 366, 512, 588, 919, 1053
TspRI CASTG 5 cut(s) 115, 538, 1209, 1261, 1320
Van91I CCANNNNNTGG 1 cut(s) 545
Vha464I CTTAAG 1 cut(s) 890
VpaK11BI GGWCC 7 cut(s) 133, 229, 326, 364, 779, 1130, 1310
VspI ATTAAT 1 cut(s) 180
XagI CCTNNNNNAGG 1 cut(s) 1500
XceI RCATGY 2 cut(s) 660, 1285
XmiI GTMKAC 1 cut(s) 954
XspI CTAG 4 cut(s) 306, 410, 653, 804
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.