Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0016002

Physical Location & Seq

Genomic Coordinates Reverse (-)

32797124 .. 32800770

Gene Structure 3647 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g35500.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2313 bp

ATGGAGCCGAAGATTGAACATATGGGTCTAGGAAACTCTTTGGAGTTTGAAGCACATCTACCACTCAGCGATAGGCTCAAGGTCTTCAAAAAATCTCAGTTCGAACCAGATAACTTTGTCACTGCCAAATGCCACGCCATGACTGAGAAGGAAGTAAAGAACCTTTGCTCTTATCTTGTTGAACTAAAGAAGGCATCTGCCGAGGAAATGCGTAAAAGTGTGTATGCTAACTATTCGGCCTTTATCCGTACGTCTAAGGAGATCACTGATCTTGAGGGACAACTTCTTTCTATGAGAAATCTTCTATCTACTCAGGCAGCTTTGGTTCATGGTTTATCTGATGGAGTTTTAGTTAATTCAACATCTACTGCTCATGATGATTATGACGATGAGGACACATATGATGAAAACAGGCACCTTTCTGAGACAGAAAAATGGTTTGCAGAATTTGTGGACACCCTCGAAGTCCTATTGGCCGAAAGAAGAGTAAATGAAGCTATGGCTGCCTTAGATGAAGGAGAGCTTATAGTGGAAAATGCTAGAGATAAGCGGAGTATTACCCGAGCTGCATTCTTGTCATTCCGGACTACCATCAATGAACAGAGACAAAGATTAGTAGATCAAATTGCAGAGACTATGTTGCAGCCTTCAACTCGCGCTGATGAGCTTCGATCATCTGTTATAGCTCTCAAAAAGCTTGGGGATGGTCCCCGTGCGCATACGTTGATGCTTAGCTCTCACTGTCAGAAGTTGCAGTCGAATGTGAAAAGCCTTAACACCACAACCACTTCATATGGAGGAGCATACATCACTACATTATCGCAACTGGTGTTTCGCTTCATTGCACAAGCAGCAAGTGACTCATTGGCGGCCTTCAGTGAGGACCCTGCTTATACATCTGAGCTTGTGACATGGGCAGTCAAACAAACAGAGGCTTATGCTCTTCTCTTAAAAAGGCATGTTCTAGCATCAGCAGCAGCTGCTGGGAGTCTAAGAGTTGCAGCCGAGTGTATTCACATATGCTTAGGTCACTGTTCTTTGCTAGAATCTCGCGGATTGTGCCTCTCTCCTGTTCTGTTGAGACTCTTTAAGCCATTTCTTGAACAGGCATTGAGTTGCAACTTAAGGAGAATTGAACAAAGTTGCAGTGCATTAGCTGTTGCGGATGATTGGTTTCTTCTACATCCAACAATAGGTGCACGCCCTTCGGGTTCTACTTCCTCTCTTACAAGTTTAAGTTCATACCAGCCAAAACTCTCAAGCAGTGCTCACAGATTCAATTCAATGGTTCAGGAACTTCTGGAGGATGTGGCGCCCCTGGAGACTCTACATTTGGATGGTCCAGCATTAGAAGGCGTTCTACAAGTGTTCAACTCCTATGTCAATTTGTTGATCCATGCACTACCTGGTGCCGTGGAGAGCGAAGAAGAAGTTCATATAATCGTCAGCATGGCAGAGACAGAAGCACAACAAATGGCTTTGTTAGCTAATGCATCATTGTTAGCAGACGAGTTGCTCCCGCGCGCTGCTATGAAGCTATTGCCTTTGCAGCAGGGTCAAACTAACAGGACGATGGCAGATATGACCCCTAGGAGAGGTTCAGACAAACAAAGCCGCATTCCAGACCCAGGCAGAGAATGGAAAAGGCGGCTTCAGCGCTCCGTTGAACAGCTGAGAGATAGTTTCTGTAGACTTCATGCCCTTGATCTCATCTTCACAGAAGATGGGGATACACGTCTCAATGCCCAAATGTACACATGTATGGATGGAAGTATAGAACCTGAATGGTTCCCATCTCCAATTCTTCAGGAACTCTTTGCCAAGCTGACAAGGATGGCAAACATTGCCACTGATATGTTTGTGGGAAGGGAAAGGTTTGCAACTATATTATTAATGAGGCTCACAGAGACGGTGATCCTTTGGCTCTCTGATGATCAAAATTTCTGGGCAGAAATAGAAGAGGGCCCTAGGCGATTAGGCCCTCTTGGACTTCAACAGTTCTATTTAGACATGCAGTTTGTGCTGCTATTTGCATCACAAGGCAGATACCTATCACGACATCTGCATCAAGTTATTAAAAACATCATTGCTCGAGCTATAGAAGCAGTTCATGCTACTGGGATAGATCCTTACAGTGTATTACCAGAAGATGACTGGTTTGCTGAAGTTGCTCAAATTGCAATTAAAATGTTGATTGGGAAAGCCAACTTCACCAATGTAGAAGACGATGGTGTCAGCCCCACTTATTCAATGTCCGGAAAATCTCCATATGGGAGTGAGACCAATCTTGCCCATCAGTATAGAGAGCACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000145 GO:0001927 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005938 GO:0006810 GO:0006887 GO:0006904 GO:0008104 GO:0008150 GO:0009987 GO:0016043 GO:0016192 GO:0022406 GO:0022607 GO:0031503 GO:0032940 GO:0032991 GO:0033036 GO:0034613 GO:0034622 GO:0034629 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044448 GO:0044464 GO:0046903 GO:0048278 GO:0051179 GO:0051234 GO:0051601 GO:0051640 GO:0051641 GO:0065003 GO:0070727 GO:0071840 GO:0071944 GO:0099023 GO:0099568 GO:0140029 GO:0140056

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Exo84_C Vps51

Protein Analysis

771

Amino Acids

86.18

Weight (kDa)

5.41

Isoelectric Point (pI)

46.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VPS51_Exo84_N	PF08700	30 - 106	8.2e-12	Vps51/EXO84/COG1 N-terminal
Exo84_C	PF16528	145 - 353	4.1e-20	Exocyst component 84 C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0016002)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10385
fragaria_vesca	FvH4_4g35500
malus_domestica	MD13G1082700.v1.1
prunus_persica	Prupe.1G264200_v2.0.a1
pyrus_communis	pycom13g07130
rosa_chinensis	RchiOBHm_Chr4g0445151
rosa_laevigata	RLG00000005763
rosa_multiflora	Rmu_sc0000050.1_g000042
rosa_roxburghii	Rroxscaffold_5G00385670
rosa_rugosa	Rorug04G0359400
rosa_samantha	Rh4AG420200 Rh4BG432000 Rh4CG446600 Rh4DG428100
rosa_wichuraiana	Rw4G036030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2231
Acc16I	TGCGCA	1 cut(s)	717
AccB1I	GGYRCC	3 cut(s)	414, 1312, 1409
AccI	GTMKAC	1 cut(s)	1690
AccII	CGCG	4 cut(s)	657, 1053, 1522, 1524
AccIII	TCCGGA	2 cut(s)	582, 2255
AciI	CCGC	7 cut(s)	550, 869, 1053, 1163, 1520, 1615, 1648
AclWI	GGATC	3 cut(s)	1387, 1909, 2120
AcoI	YGGCCR	1 cut(s)	474
AcsI	RAATTY	2 cut(s)	446, 1939
AcuI	CTGAAG	4 cut(s)	859, 1637, 1790, 2184
AcyI	GRCGYC	1 cut(s)	1313
AfaI	GTAC	2 cut(s)	250, 1754
AfeI	AGCGCT	1 cut(s)	1658
AfiI	CCNNNNNNNGG	3 cut(s)	1193, 1595, 1628
AflII	CTTAAG	1 cut(s)	1123
AflIII	ACRYGT	2 cut(s)	1733, 1757
AjiI	CACGTC	1 cut(s)	1736
AjnI	CCWGG	3 cut(s)	1317, 1405, 1627
Alw21I	GWGCWC	3 cut(s)	1201, 1270, 2310
Alw26I	GTCTC	9 cut(s)	419, 598, 626, 1075, 1316, 1451, 1742, 1901, 2273
Alw44I	GTGCAC	1 cut(s)	1197
AlwI	GGATC	3 cut(s)	1387, 1909, 2120
AlwNI	CAGNNNCTG	2 cut(s)	980, 983
Ama87I	CYCGRG	2 cut(s)	561, 2091
Aor13HI	TCCGGA	2 cut(s)	582, 2255
Aor51HI	AGCGCT	1 cut(s)	1658
AoxI	GGCC	5 cut(s)	237, 474, 870, 1963, 1978
ApaI	GGGCCC	1 cut(s)	1967
ApaLI	GTGCAC	1 cut(s)	1197
ApoI	RAATTY	2 cut(s)	446, 1939
ArsI	GACNNNNNNTTYG	4 cut(s)	1315, 1347, 2000, 2032
AseI	ATTAAT	1 cut(s)	1892
Asp700I	GAANNNNTTC	3 cut(s)	1356, 1431, 2106
AspA2I	CCTAGG	2 cut(s)	1589, 1967
AspLEI	GCGC	6 cut(s)	659, 718, 1315, 1524, 1526, 1659
AspS9I	GGNCC	6 cut(s)	707, 883, 1340, 1963, 1964, 1979
AsuHPI	GGTGA	2 cut(s)	1924, 2203
AsuII	TTCGAA	1 cut(s)	102
AvaI	CYCGRG	2 cut(s)	561, 2091
AvaII	GGWCC	3 cut(s)	707, 883, 1340
AvrII	CCTAGG	2 cut(s)	1589, 1967
BaeGI	GKGCMC	2 cut(s)	1201, 1967
BanI	GGYRCC	3 cut(s)	414, 1312, 1409
BanII	GRGCYC	1 cut(s)	1967
BarI	GAAGNNNNNNTAC	4 cut(s)	42, 74, 1344, 1376
BbsI	GAAGAC	2 cut(s)	76, 2229
Bbv12I	GWGCWC	3 cut(s)	1201, 1270, 2310
BceAI	ACGGC	1 cut(s)	1397
BcgI	CGANNNNNNTGC	2 cut(s)	1188, 1222
BciT130I	CCWGG	3 cut(s)	1319, 1407, 1629
BciVI	GTATCC	1 cut(s)	1723
BclI	TGATCA	1 cut(s)	1933
BcoDI	GTCTC	9 cut(s)	419, 598, 626, 1075, 1316, 1451, 1742, 1901, 2273
BfaI	CTAG	7 cut(s)	29, 540, 965, 1043, 1590, 1968, 2311
BfmI	CTRYAG	2 cut(s)	1687, 2097
BfoI	RGCGCY	2 cut(s)	1316, 1660
BfrI	CTTAAG	1 cut(s)	1123
BfuI	GTATCC	1 cut(s)	1723
BlnI	CCTAGG	2 cut(s)	1589, 1967
BlpI	GCTNAGC	1 cut(s)	731
Bme1390I	CCNGG	3 cut(s)	1319, 1407, 1629
Bme18I	GGWCC	3 cut(s)	707, 883, 1340
BmeT110I	CYCGRG	2 cut(s)	561, 2091
BmgBI	CACGTC	1 cut(s)	1736
BmgT120I	GGNCC	6 cut(s)	707, 883, 1340, 1963, 1964, 1979
BmiI	GGNNCC	8 cut(s)	6, 416, 709, 885, 1314, 1411, 1790, 1965
BmrFI	CCNGG	3 cut(s)	1319, 1407, 1629
BmrI	ACTGGG	1 cut(s)	2127
BmsI	GCATC	6 cut(s)	203, 717, 977, 1502, 2042, 2074
BmuI	ACTGGG	1 cut(s)	2127
BpiI	GAAGAC	2 cut(s)	76, 2229
BpmI	CTGGAG	2 cut(s)	1322, 1340
Bpu10I	CCTNAGC	1 cut(s)	1024
Bpu1102I	GCTNAGC	1 cut(s)	731
Bpu14I	TTCGAA	1 cut(s)	102
BpuEI	CTTGAG	3 cut(s)	62, 293, 1243
BsaBI	GATNNNNATC	1 cut(s)	2050
BsaHI	GRCGYC	1 cut(s)	1313
BsaI	GGTCTC	1 cut(s)	2273
BsaJI	CCNNGG	6 cut(s)	201, 1317, 1413, 1589, 1627, 1967
BsaWI	WCCGGW	2 cut(s)	582, 2255
BsaXI	ACNNNNNCTCC	2 cut(s)	336, 366
Bsc4I	CCNNNNNNNGG	3 cut(s)	1193, 1595, 1628
Bse1I	ACTGG	3 cut(s)	831, 2122, 2159
Bse3DI	GCAATG	3 cut(s)	840, 1842, 2085
Bse8I	GATNNNNATC	1 cut(s)	2050
BseAI	TCCGGA	2 cut(s)	582, 2255
BseBI	CCWGG	3 cut(s)	1319, 1407, 1629
BseDI	CCNNGG	6 cut(s)	201, 1317, 1413, 1589, 1627, 1967
BseGI	GGATG	7 cut(s)	709, 1171, 1183, 1312, 1342, 1771, 1839
BseJI	GATNNNNATC	1 cut(s)	2050
BseLI	CCNNNNNNNGG	3 cut(s)	1193, 1595, 1628
BseMI	GCAATG	3 cut(s)	840, 1842, 2085
BseMII	CTCAG	7 cut(s)	79, 110, 135, 326, 414, 891, 1664
BseNI	ACTGG	3 cut(s)	831, 2122, 2159
BsePI	GCGCGC	1 cut(s)	1522
BseRI	GAGGAG	1 cut(s)	813
BseSI	GKGCMC	2 cut(s)	1201, 1967
BseYI	CCCAGC	1 cut(s)	983
Bsh1236I	CGCG	4 cut(s)	657, 1053, 1522, 1524
BshFI	GGCC	5 cut(s)	239, 476, 872, 1965, 1980
BshNI	GGYRCC	3 cut(s)	414, 1312, 1409
BsiHKAI	GWGCWC	3 cut(s)	1201, 1270, 2310
BsiHKCI	CYCGRG	2 cut(s)	561, 2091
BsiSI	CCGG	2 cut(s)	583, 2256
BsiWI	CGTACG	1 cut(s)	248
BslFI	GGGAC	2 cut(s)	291, 693
BslI	CCNNNNNNNGG	3 cut(s)	1193, 1595, 1628
BsmAI	GTCTC	9 cut(s)	419, 598, 626, 1075, 1316, 1451, 1742, 1901, 2273
BsmBI	CGTCTC	2 cut(s)	1742, 1901
BsmFI	GGGAC	2 cut(s)	291, 693
BsmI	GAATGC	2 cut(s)	569, 1617
BsnI	GGCC	5 cut(s)	239, 476, 872, 1965, 1980
Bso31I	GGTCTC	1 cut(s)	2273
BsoBI	CYCGRG	2 cut(s)	561, 2091
Bsp119I	TTCGAA	1 cut(s)	102
Bsp120I	GGGCCC	1 cut(s)	1963
Bsp1286I	GDGCHC	4 cut(s)	1201, 1270, 1967, 2310
Bsp13I	TCCGGA	2 cut(s)	582, 2255
Bsp1407I	TGTACA	1 cut(s)	1752
Bsp143I	GATC	9 cut(s)	261, 268, 619, 671, 1392, 1705, 1914, 1933, 2125
Bsp1720I	GCTNAGC	1 cut(s)	731
BspACI	CCGC	7 cut(s)	550, 869, 1053, 1163, 1520, 1615, 1648
BspANI	GGCC	5 cut(s)	239, 476, 872, 1965, 1980
BspCNI	CTCAG	7 cut(s)	78, 109, 136, 325, 415, 892, 1665
BspEI	TCCGGA	2 cut(s)	582, 2255
BspFNI	CGCG	4 cut(s)	657, 1053, 1522, 1524
BspHI	TCATGA	1 cut(s)	373
BspLI	GGNNCC	8 cut(s)	6, 416, 709, 885, 1314, 1411, 1790, 1965
BspPI	GGATC	3 cut(s)	1387, 1909, 2120
BspQI	GCTCTTC	1 cut(s)	948
BspT104I	TTCGAA	1 cut(s)	102
BspT107I	GGYRCC	3 cut(s)	414, 1312, 1409
BspTI	CTTAAG	1 cut(s)	1123
BspTNI	GGTCTC	1 cut(s)	2273
BsrDI	GCAATG	3 cut(s)	840, 1842, 2085
BsrGI	TGTACA	1 cut(s)	1752
BsrI	ACTGG	3 cut(s)	831, 2122, 2159
BssECI	CCNNGG	6 cut(s)	201, 1317, 1413, 1589, 1627, 1967
BssHII	GCGCGC	1 cut(s)	1522
BssMI	GATC	9 cut(s)	261, 268, 619, 671, 1392, 1705, 1914, 1933, 2125
BssNI	GRCGYC	1 cut(s)	1313
BssT1I	CCWWGG	2 cut(s)	1589, 1967
Bst2UI	CCWGG	3 cut(s)	1319, 1407, 1629
Bst4CI	ACNGT	5 cut(s)	743, 1034, 1912, 1998, 2135
Bst6I	CTCTTC	3 cut(s)	478, 948, 1953
BstACI	GRCGYC	1 cut(s)	1313
BstAFI	CTTAAG	1 cut(s)	1123
BstAPI	GCANNNNNTGC	4 cut(s)	980, 1844, 2020, 2111
BstAUI	TGTACA	1 cut(s)	1752
BstBI	TTCGAA	1 cut(s)	102
BstC8I	GCNNGC	2 cut(s)	1201, 1524
BstDSI	CCRYGG	1 cut(s)	1413
BstENI	CCTNNNNNAGG	1 cut(s)	1593
BstF5I	GGATG	7 cut(s)	709, 1171, 1183, 1312, 1342, 1771, 1839
BstFNI	CGCG	4 cut(s)	657, 1053, 1522, 1524
BstH2I	RGCGCY	2 cut(s)	1316, 1660
BstHHI	GCGC	6 cut(s)	659, 718, 1315, 1524, 1526, 1659
BstKTI	GATC	9 cut(s)	264, 271, 622, 674, 1395, 1708, 1917, 1936, 2128
BstMAI	GTCTC	9 cut(s)	419, 598, 626, 1075, 1316, 1451, 1742, 1901, 2273
BstMBI	GATC	9 cut(s)	261, 268, 619, 671, 1392, 1705, 1914, 1933, 2125
BstNI	CCWGG	3 cut(s)	1319, 1407, 1629
BstNSI	RCATGY	3 cut(s)	962, 1761, 2014
BstSCI	CCNGG	3 cut(s)	1317, 1405, 1627
BstSFI	CTRYAG	2 cut(s)	1687, 2097
BstSLI	GKGCMC	2 cut(s)	1201, 1967
BstUI	CGCG	4 cut(s)	657, 1053, 1522, 1524
BstV2I	GAAGAC	2 cut(s)	76, 2229
BstX2I	RGATCY	1 cut(s)	2125
BstYI	RGATCY	1 cut(s)	2125
BsuI	GTATCC	1 cut(s)	1723
BsuRI	GGCC	5 cut(s)	239, 476, 872, 1965, 1980
BtgI	CCRYGG	1 cut(s)	1413
BtrI	CACGTC	1 cut(s)	1736
BtsCI	GGATG	7 cut(s)	709, 1171, 1183, 1312, 1342, 1771, 1839
BtsI	GCAGTG	3 cut(s)	120, 1153, 1270
BtsIMutI	CAGTG	9 cut(s)	120, 264, 739, 883, 1030, 1153, 1270, 1848, 2140
Cac8I	GCNNGC	2 cut(s)	1201, 1524
CaiI	CAGNNNCTG	2 cut(s)	980, 983
CciI	TCATGA	1 cut(s)	373
CfoI	GCGC	6 cut(s)	659, 718, 1315, 1524, 1526, 1659
Cfr13I	GGNCC	6 cut(s)	707, 883, 1340, 1963, 1964, 1979
CsiI	ACCWGGT	1 cut(s)	1405
Csp6I	GTAC	2 cut(s)	249, 1753
CviQI	GTAC	2 cut(s)	249, 1753
DinI	GGCGCC	1 cut(s)	1314
DpnI	GATC	9 cut(s)	263, 270, 621, 673, 1394, 1707, 1916, 1935, 2127
DpnII	GATC	9 cut(s)	261, 268, 619, 671, 1392, 1705, 1914, 1933, 2125
DrdI	GACNNNNNNGTC	1 cut(s)	2231
DseDI	GACNNNNNNGTC	1 cut(s)	2231
EaeI	YGGCCR	1 cut(s)	474
Eam1104I	CTCTTC	3 cut(s)	478, 948, 1953
EarI	CTCTTC	3 cut(s)	478, 948, 1953
Eco130I	CCWWGG	2 cut(s)	1589, 1967
Eco24I	GRGCYC	1 cut(s)	1967
Eco31I	GGTCTC	1 cut(s)	2273
Eco47I	GGWCC	3 cut(s)	707, 883, 1340
Eco47III	AGCGCT	1 cut(s)	1658
Eco57I	CTGAAG	4 cut(s)	859, 1637, 1790, 2184
Eco88I	CYCGRG	2 cut(s)	561, 2091
EcoNI	CCTNNNNNAGG	1 cut(s)	1593
EcoO109I	RGGNCCY	4 cut(s)	883, 1963, 1964, 1979
EcoRII	CCWGG	3 cut(s)	1317, 1405, 1627
EcoT14I	CCWWGG	2 cut(s)	1589, 1967
EcoT22I	ATGCAT	1 cut(s)	1495
EcoT38I	GRGCYC	1 cut(s)	1967
EgeI	GGCGCC	1 cut(s)	1314
EheI	GGCGCC	1 cut(s)	1314
ErhI	CCWWGG	2 cut(s)	1589, 1967
Esp3I	CGTCTC	2 cut(s)	1742, 1901
FalI	AAGNNNNNCTT	2 cut(s)	507, 539
FaqI	GGGAC	2 cut(s)	291, 693
FauI	CCCGC	1 cut(s)	1527
FauNDI	CATATG	5 cut(s)	21, 400, 793, 1019, 2269
FbaI	TGATCA	1 cut(s)	1933
FblI	GTMKAC	1 cut(s)	1690
FokI	GGATG	7 cut(s)	716, 1170, 1178, 1319, 1349, 1778, 1846
FriOI	GRGCYC	1 cut(s)	1967
FspAI	RTGCGCAY	1 cut(s)	717
FspBI	CTAG	7 cut(s)	29, 540, 965, 1043, 1590, 1968, 2311
FspI	TGCGCA	1 cut(s)	717
GlaI	GCGC	6 cut(s)	658, 717, 1314, 1523, 1525, 1658
GsaI	CCCAGC	1 cut(s)	987
GsuI	CTGGAG	2 cut(s)	1322, 1340
HaeII	RGCGCY	2 cut(s)	1316, 1660
HaeIII	GGCC	5 cut(s)	239, 476, 872, 1965, 1980
HapII	CCGG	2 cut(s)	583, 2256
HhaI	GCGC	6 cut(s)	659, 718, 1315, 1524, 1526, 1659
Hin1I	GRCGYC	1 cut(s)	1313
Hin6I	GCGC	6 cut(s)	657, 716, 1313, 1522, 1524, 1657
HinP1I	GCGC	6 cut(s)	657, 716, 1313, 1522, 1524, 1657
HindIII	AAGCTT	1 cut(s)	695
HinfI	GANTC	6 cut(s)	860, 988, 1046, 1083, 1275, 1324
HpaII	CCGG	2 cut(s)	583, 2256
HphI	GGTGA	2 cut(s)	1924, 2203
Hpy166II	GTNNAC	4 cut(s)	454, 1199, 1691, 1755
Hpy188I	TCNGA	6 cut(s)	340, 424, 747, 901, 1603, 1930
Hpy8I	GTNNAC	4 cut(s)	454, 1199, 1691, 1755
HpyAV	CCTTC	8 cut(s)	142, 184, 509, 657, 883, 1215, 1346, 1860
HpyCH4III	ACNGT	5 cut(s)	743, 1034, 1912, 1998, 2135
HpyCH4IV	ACGT	3 cut(s)	251, 722, 1735
HpySE526I	ACGT	3 cut(s)	251, 722, 1735
Hsp92I	GRCGYC	1 cut(s)	1313
HspAI	GCGC	6 cut(s)	657, 716, 1313, 1522, 1524, 1657
KasI	GGCGCC	1 cut(s)	1312
Kpn2I	TCCGGA	2 cut(s)	582, 2255
Ksp22I	TGATCA	1 cut(s)	1933
Kzo9I	GATC	9 cut(s)	261, 268, 619, 671, 1392, 1705, 1914, 1933, 2125
LguI	GCTCTTC	1 cut(s)	948
LmnI	GCTCC	4 cut(s)	4, 800, 1521, 1664
LweI	GCATC	6 cut(s)	203, 717, 977, 1502, 2042, 2074
MabI	ACCWGGT	1 cut(s)	1405
MaeI	CTAG	7 cut(s)	29, 540, 965, 1043, 1590, 1968, 2311
MaeII	ACGT	3 cut(s)	251, 722, 1735
MaeIII	GTNAC	4 cut(s)	118, 857, 907, 1028
MalI	GATC	9 cut(s)	263, 270, 621, 673, 1394, 1707, 1916, 1935, 2127
MboI	GATC	9 cut(s)	261, 268, 619, 671, 1392, 1705, 1914, 1933, 2125
MflI	RGATCY	1 cut(s)	2125
MhlI	GDGCHC	4 cut(s)	1201, 1270, 1967, 2310
Mly113I	GGCGCC	1 cut(s)	1313
MlyI	GAGTC	4 cut(s)	854, 997, 1077, 1318
MmeI	TCCRAC	1 cut(s)	1211
Mph1103I	ATGCAT	1 cut(s)	1495
MroI	TCCGGA	2 cut(s)	582, 2255
MroXI	GAANNNNTTC	3 cut(s)	1356, 1431, 2106
MseI	TTAA	9 cut(s)	354, 774, 950, 1089, 1124, 1235, 1892, 2076, 2184
MslI	CAYNNNNRTG	3 cut(s)	1335, 1760, 1853
MspA1I	CMGCKG	2 cut(s)	980, 1672
MspCI	CTTAAG	1 cut(s)	1123
MspI	CCGG	2 cut(s)	583, 2256
MspR9I	CCNGG	3 cut(s)	1319, 1407, 1629
Mva1269I	GAATGC	2 cut(s)	569, 1617
MvaI	CCWGG	3 cut(s)	1319, 1407, 1629
MvnI	CGCG	4 cut(s)	657, 1053, 1522, 1524
NarI	GGCGCC	1 cut(s)	1313
NdeI	CATATG	5 cut(s)	21, 400, 793, 1019, 2269
NdeII	GATC	9 cut(s)	261, 268, 619, 671, 1392, 1705, 1914, 1933, 2125
NlaIV	GGNNCC	8 cut(s)	6, 416, 709, 885, 1314, 1411, 1790, 1965
NmeAIII	GCCGAG	2 cut(s)	226, 1030
NmuCI	GTSAC	4 cut(s)	118, 857, 907, 1028
NsbI	TGCGCA	1 cut(s)	717
NsiI	ATGCAT	1 cut(s)	1495
NspI	RCATGY	3 cut(s)	962, 1761, 2014
NspV	TTCGAA	1 cut(s)	102
PaeR7I	CTCGAG	1 cut(s)	2091
PagI	TCATGA	1 cut(s)	373
PauI	GCGCGC	1 cut(s)	1522
PciI	ACATGT	1 cut(s)	1757
PciSI	GCTCTTC	1 cut(s)	948
PctI	GAATGC	2 cut(s)	569, 1617
PdmI	GAANNNNTTC	3 cut(s)	1356, 1431, 2106
PfeI	GAWTC	2 cut(s)	1046, 1275
Pfl23II	CGTACG	1 cut(s)	248
PleI	GAGTC	4 cut(s)	854, 996, 1077, 1318
PluTI	GGCGCC	1 cut(s)	1316
PpsI	GAGTC	4 cut(s)	854, 996, 1077, 1318
PpuMI	RGGWCCY	1 cut(s)	883
PscI	ACATGT	1 cut(s)	1757
PshBI	ATTAAT	1 cut(s)	1892
Psp5II	RGGWCCY	1 cut(s)	883
Psp6I	CCWGG	3 cut(s)	1317, 1405, 1627
PspFI	CCCAGC	1 cut(s)	983
PspGI	CCWGG	3 cut(s)	1317, 1405, 1627
PspLI	CGTACG	1 cut(s)	248
PspN4I	GGNNCC	8 cut(s)	6, 416, 709, 885, 1314, 1411, 1790, 1965
PspOMI	GGGCCC	1 cut(s)	1963
PspPI	GGNCC	6 cut(s)	707, 883, 1340, 1963, 1964, 1979
PspPPI	RGGWCCY	1 cut(s)	883
PspXI	VCTCGAGB	1 cut(s)	2091
PstNI	CAGNNNCTG	2 cut(s)	980, 983
PsuI	RGATCY	1 cut(s)	2125
PteI	GCGCGC	1 cut(s)	1522
PvuII	CAGCTG	2 cut(s)	980, 1672
RsaI	GTAC	2 cut(s)	250, 1754
RsaNI	GTAC	2 cut(s)	249, 1753
RseI	CAYNNNNRTG	3 cut(s)	1335, 1760, 1853
SapI	GCTCTTC	1 cut(s)	948
SaqAI	TTAA	9 cut(s)	354, 774, 950, 1089, 1124, 1235, 1892, 2076, 2184
Sau3AI	GATC	9 cut(s)	261, 268, 619, 671, 1392, 1705, 1914, 1933, 2125
Sau96I	GGNCC	6 cut(s)	707, 883, 1340, 1963, 1964, 1979
SchI	GAGTC	4 cut(s)	854, 997, 1077, 1318
ScrFI	CCNGG	3 cut(s)	1319, 1407, 1629
SduI	GDGCHC	4 cut(s)	1201, 1270, 1967, 2310
SexAI	ACCWGGT	1 cut(s)	1405
SfaNI	GCATC	6 cut(s)	203, 717, 977, 1502, 2042, 2074
SfcI	CTRYAG	2 cut(s)	1687, 2097
SfoI	GGCGCC	1 cut(s)	1314
Sfr274I	CTCGAG	1 cut(s)	2091
SfuI	TTCGAA	1 cut(s)	102
SinI	GGWCC	3 cut(s)	707, 883, 1340
SlaI	CTCGAG	1 cut(s)	2091
SmiMI	CAYNNNNRTG	3 cut(s)	1335, 1760, 1853
SmlI	CTYRAG	5 cut(s)	77, 272, 1123, 1258, 2091
SmoI	CTYRAG	5 cut(s)	77, 272, 1123, 1258, 2091
SsiI	CCGC	7 cut(s)	550, 869, 1053, 1163, 1520, 1615, 1648
SspDI	GGCGCC	1 cut(s)	1312
SspMI	CTAG	7 cut(s)	29, 540, 965, 1043, 1590, 1968, 2311
StyD4I	CCNGG	3 cut(s)	1317, 1405, 1627
StyI	CCWWGG	2 cut(s)	1589, 1967
TaaI	ACNGT	5 cut(s)	743, 1034, 1912, 1998, 2135
TaiI	ACGT	3 cut(s)	254, 725, 1738
TaqI	TCGA	5 cut(s)	102, 462, 670, 758, 2092
TatI	WGTACW	1 cut(s)	1752
TauI	GCSGC	3 cut(s)	872, 1617, 1651
TfiI	GAWTC	2 cut(s)	1046, 1275
Tru1I	TTAA	9 cut(s)	354, 774, 950, 1089, 1124, 1235, 1892, 2076, 2184
Tru9I	TTAA	9 cut(s)	354, 774, 950, 1089, 1124, 1235, 1892, 2076, 2184
TscAI	CASTG	9 cut(s)	127, 271, 746, 883, 1037, 1153, 1270, 1855, 2140
TseFI	GTSAC	4 cut(s)	118, 857, 907, 1028
Tsp45I	GTSAC	4 cut(s)	118, 857, 907, 1028
TspGWI	ACGGA	2 cut(s)	236, 1651
TspRI	CASTG	9 cut(s)	127, 271, 746, 883, 1037, 1153, 1270, 1855, 2140
Vha464I	CTTAAG	1 cut(s)	1123
VneI	GTGCAC	1 cut(s)	1197
VpaK11BI	GGWCC	3 cut(s)	707, 883, 1340
VspI	ATTAAT	1 cut(s)	1892
XagI	CCTNNNNNAGG	1 cut(s)	1593
XapI	RAATTY	2 cut(s)	446, 1939
XceI	RCATGY	3 cut(s)	962, 1761, 2014
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1403, 1635, 2151
XhoI	CTCGAG	1 cut(s)	2091
XmaJI	CCTAGG	2 cut(s)	1589, 1967
XmiI	GTMKAC	1 cut(s)	1690
XmnI	GAANNNNTTC	3 cut(s)	1356, 1431, 2106
XspI	CTAG	7 cut(s)	29, 540, 965, 1043, 1590, 1968, 2311
Zsp2I	ATGCAT	1 cut(s)	1495

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.