Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0016002

Physical Location & Seq

Genomic Coordinates Reverse (-)

71754979 .. 71761127

Gene Structure 6149 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG420200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2340 bp

ATGGACTCGAAGACACCGATACATATTTCACATTCGTCGAGTTTAGGAAATTCTTTGGAGTTTGAACAACATCTACCACTTAAGGACAGGCTGAAGTCCTTCAAATCCACTCATTTCGAACCAGATGAATTTGTCACCGCCAAATGCCACGCCATGACTGAGAAGGAAGTAAAGAACCTGTGCTCCTACCTTCTTGAACTAAAGAGGGCATCTGCCGAGGAAATGCGTAAAAGTGTGTATGCTAATTATTCGGCTTTTATCCGTACATCTAAGGAGATCACTGACCTTGAGGGACAGCTCCTTTCCATGAGAAATCTCTTATCTACTCAAGCAGCTTTAGTTCATGGTTTATCTGAAGGAGTTCTAGTTGATTCAATGTCTGCTTCTCATGATGATTATGACGACGAGGACACATCTGATGAAAACAGACCCCTTTCCGAGACAGAAAAATGGTTTGCAGAATTTTTGGACACTCTGGAAGTCCTATTGGCCGAAAGAAGGGTGAATGAAGCTATGGCTGCCTTGGATGAAGGAGAGCGTACAGTTTATAAAGCTGTTGACAAGCGAACTATAACCCGAGCTGCATTCTTGTCATTCCAGACTACCATCAATGGACAGAGACAAAGATTAGTAGATCAGATTGCAGAGACTATGTTGCAGCCTTCAATTGGTGCTGATGAGCTTCGATCAGCTGTTGTAGCTCTCAAAAAGCTCGGGGATGGTTCCCGTGCGCATACGCTGCTGCTCAGGTCTCACTGTCAGAAGTTGCAGTCTAATATGAAAAACCTTAATTCCTCAACCACTTCATATGGAGGAGCATACATCACTACATTATCGCAAATACTGTTTCGTTTCATTGCACAAGCAGCAAGTGACTCCTTGGCGGTTTTCAGTGAGGACCATGCTTATACATCTGAGCTTGTGACATGGGCAGTCAAACAGACCGAGGCTTATGCTCTTCTACTAAAGAGGCATGTTCTAGCATCAGCAGCGGCTGCTGGGAGTCTAAGTGTTGCTGCCGAGTGTGTTCATATATGCTTGGGTCATTGTTCTTTGCTAGAAGCTCGCGGATTGTGCCTCTCTCCTGTTCTGTTGAGACTATTTAGGCCATTTGTCGAACAGGCATTGAGCTGCAACTTAAGGAGAATTGAACAAAGCAGCTGTGCATTAGCTGTTGCGGACGATTGGTTTCTTCTTCATCCAACAATTGGTACACGCACGTTGGGTTCTACTTCCTCTCTTCCTAGTTTAAGTGCAAACCAGCCAAAACTTTCAAGCAGTGCTTACAGATTCAATGCAATGGTTCAGGAACTTCTAGAGGATGTGGCGCCCCTCGAGACTCTTCAGCTAGATGGTCCAGCATTAGAAGGCGTTTTACAAGTGTTTAACTCCTACGTCAATTTGCTGATCCATGCACTACCTGGTGCCGTGGAGAGCGAAGAGGAAGTTCCTATAATTGTTAGCATGGCAGAGACAGAAGCACAACAGATGGCTTTGTTAGCTAATGCATCATTGTTAGCAGACGAGCTGCTCCCACGCGCTGCCATGAAGCTTTTGCCCTTCCAGCAGGGTCAAACTAACAGGTCGATGCCAGAGATGACCCCTAGGAGAGGTTCGGACAAACAAAGCCGCGTTCCAGACCCAGGCAGGGAATGGAAGCGGCGGCTTCAGCGTTCGGTTGAACAGCTGAGAGATAGCTTCTGTAGACTCCATGCTCTTGATCTCATCTTCACAGAAGATGGGGATACGCGTCTCAACGCGCAAATGTACACATGCATGGATGAAAGTGTAGAGCCTGAATGGTTCCCATCTCCAATTCTTCAGGAACTCTTTGCAAAGCTGACAAGGATGGCAAACATTGCAACTGATATGTTTGTGGGAAGGGAAAGGTTTGCAACTATCTTATTAATGAGACTCACGGAGACTGTGATCCTCTGGCTTTCTGAGGATCAAAACTTTTGGGCGGAGATAGAAGAGGGCCCAAGGCCATTAGGCCCTCTTGGACTTCAACAGTTCTATTTGGACATGCAGTTTGTGCTGCTTTTTGCATCACAAGGCAGATACCTATCGCGGCATCTGCATCAAGTTATAAAAAACATCATTGCTCGAGCTATCGAAGCGGTTCATGCTACTGGAATAGACCCTTACAGTGTATTGCCAGAAGATGACTGGTTTGCTGAAGTAGCTCAAATTGCAATTAAAATGTTGATTGGGAAAGCCAGCTTCTCCAATGTAGAAGAAGATGGTCTCAGCCCCACTTATTCAATGTCAGGAAAATCTCCATCTATCCATTCTCATGGGAGTGAGACCAATCTTGCCCACCACTATAGAGAGCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000145 GO:0001927 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005938 GO:0006810 GO:0006887 GO:0006904 GO:0008104 GO:0008150 GO:0009987 GO:0016043 GO:0016192 GO:0022406 GO:0022607 GO:0031503 GO:0032940 GO:0032991 GO:0033036 GO:0034613 GO:0034622 GO:0034629 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044448 GO:0044464 GO:0046903 GO:0048278 GO:0051179 GO:0051234 GO:0051601 GO:0051640 GO:0051641 GO:0065003 GO:0070727 GO:0071840 GO:0071944 GO:0099023 GO:0099568 GO:0140029 GO:0140056

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Exo84_C Vps51

Protein Analysis

779

Amino Acids

86.98

Weight (kDa)

5.37

Isoelectric Point (pI)

51.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VPS51_Exo84_N	PF08700	34 - 111	5.6e-12	Vps51/EXO84/COG1 N-terminal
Exo84_C	PF16528	150 - 358	1.8e-20	Exocyst component 84 C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016002)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10385
fragaria_vesca	FvH4_4g35500
malus_domestica	MD13G1082700.v1.1
prunus_persica	Prupe.1G264200_v2.0.a1
pyrus_communis	pycom13g07130
rosa_chinensis	RchiOBHm_Chr4g0445151
rosa_laevigata	RLG00000005763
rosa_multiflora	Rmu_sc0000050.1_g000042
rosa_roxburghii	Rroxscaffold_5G00385670
rosa_rugosa	Rorug04G0359400
rosa_samantha	Rh4AG420200 Rh4BG432000 Rh4CG446600 Rh4DG428100
rosa_wichuraiana	Rw4G036030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	549, 2090
Acc16I	TGCGCA	1 cut(s)	732
AccB1I	GGYRCC	2 cut(s)	1327, 1424
AccB7I	CCANNNNNTGG	1 cut(s)	1208
AccI	GTMKAC	1 cut(s)	1705
AccII	CGCG	6 cut(s)	1068, 1539, 1632, 1750, 1760, 2071
AclWI	GGATC	3 cut(s)	1402, 1924, 1956
AcoI	YGGCCR	1 cut(s)	489
AcsI	RAATTY	3 cut(s)	49, 128, 461
AcuI	CTGAAG	6 cut(s)	113, 375, 1328, 1652, 1805, 2199
AcyI	GRCGYC	1 cut(s)	1328
AfaI	GTAC	4 cut(s)	265, 541, 1213, 1769
AfiI	CCNNNNNNNGG	6 cut(s)	498, 668, 1208, 1610, 1643, 1648
AflII	CTTAAG	2 cut(s)	80, 1138
AflIII	ACRYGT	1 cut(s)	1748
AjnI	CCWGG	2 cut(s)	1420, 1642
AloI	GAACNNNNNNTCC	2 cut(s)	167, 199
Alw21I	GWGCWC	1 cut(s)	185
AlwI	GGATC	3 cut(s)	1402, 1924, 1956
AlwNI	CAGNNNCTG	1 cut(s)	995
Ama87I	CYCGRG	4 cut(s)	576, 713, 1334, 2106
AoxI	GGCC	5 cut(s)	489, 1106, 1978, 1985, 1993
ApaI	GGGCCC	1 cut(s)	1982
ApoI	RAATTY	3 cut(s)	49, 128, 461
ArsI	GACNNNNNNTTYG	2 cut(s)	2015, 2047
AseI	ATTAAT	1 cut(s)	1907
Asp700I	GAANNNNTTC	3 cut(s)	98, 360, 2121
AspA2I	CCTAGG	1 cut(s)	1604
AspLEI	GCGC	4 cut(s)	733, 1330, 1541, 1762
AspS9I	GGNCC	5 cut(s)	898, 1355, 1978, 1979, 1994
AsuHPI	GGTGA	2 cut(s)	127, 514
AsuII	TTCGAA	1 cut(s)	117
AvaI	CYCGRG	4 cut(s)	576, 713, 1334, 2106
AvaII	GGWCC	2 cut(s)	898, 1355
AvrII	CCTAGG	1 cut(s)	1604
BaeGI	GKGCMC	1 cut(s)	1982
BanI	GGYRCC	2 cut(s)	1327, 1424
BanII	GRGCYC	1 cut(s)	1982
BarI	GAAGNNNNNNTAC	2 cut(s)	1359, 1391
BbsI	GAAGAC	1 cut(s)	17
Bbv12I	GWGCWC	1 cut(s)	185
BccI	CCATC	9 cut(s)	614, 713, 1346, 1483, 1733, 1816, 1843, 2237, 2290
BceAI	ACGGC	1 cut(s)	1412
BcgI	CGANNNNNNTGC	2 cut(s)	935, 969
BciT130I	CCWGG	2 cut(s)	1422, 1644
BciVI	GTATCC	1 cut(s)	1738
BfaI	CTAG	7 cut(s)	365, 980, 1058, 1245, 1316, 1349, 1605
BfmI	CTRYAG	2 cut(s)	1702, 2326
BfoI	RGCGCY	1 cut(s)	1331
BfrI	CTTAAG	2 cut(s)	80, 1138
BfuI	GTATCC	1 cut(s)	1738
BlnI	CCTAGG	1 cut(s)	1604
Bme1390I	CCNGG	2 cut(s)	1422, 1644
Bme18I	GGWCC	2 cut(s)	898, 1355
BmeT110I	CYCGRG	4 cut(s)	576, 713, 1334, 2106
BmgT120I	GGNCC	5 cut(s)	898, 1355, 1978, 1979, 1994
BmiI	GGNNCC	5 cut(s)	724, 1329, 1426, 1805, 1980
BmrFI	CCNGG	2 cut(s)	1422, 1644
BmsI	GCATC	7 cut(s)	218, 992, 1517, 1578, 2057, 2083, 2089
BpiI	GAAGAC	1 cut(s)	17
Bpu10I	CCTNAGC	1 cut(s)	746
Bpu14I	TTCGAA	1 cut(s)	117
BpuEI	CTTGAG	2 cut(s)	308, 312
BsaBI	GATNNNNATC	1 cut(s)	2065
BsaHI	GRCGYC	1 cut(s)	1328
BsaI	GGTCTC	3 cut(s)	756, 2252, 2300
BsaJI	CCNNGG	8 cut(s)	216, 522, 879, 945, 1428, 1604, 1642, 1982
BsaXI	ACNNNNNCTCC	6 cut(s)	167, 197, 351, 381, 994, 1024
Bsc4I	CCNNNNNNNGG	6 cut(s)	498, 668, 1208, 1610, 1643, 1648
Bse1I	ACTGG	2 cut(s)	2137, 2174
Bse3DI	GCAATG	4 cut(s)	855, 1305, 1857, 2100
Bse8I	GATNNNNATC	1 cut(s)	2065
BseBI	CCWGG	2 cut(s)	1422, 1644
BseDI	CCNNGG	8 cut(s)	216, 522, 879, 945, 1428, 1604, 1642, 1982
BseGI	GGATG	6 cut(s)	532, 724, 1198, 1327, 1786, 1854
BseJI	GATNNNNATC	1 cut(s)	2065
BseLI	CCNNNNNNNGG	6 cut(s)	498, 668, 1208, 1610, 1643, 1648
BseMI	GCAATG	4 cut(s)	855, 1305, 1857, 2100
BseMII	CTCAG	6 cut(s)	150, 760, 906, 1679, 1935, 2263
BseNI	ACTGG	2 cut(s)	2137, 2174
BseRI	GAGGAG	1 cut(s)	828
BseSI	GKGCMC	1 cut(s)	1982
BseYI	CCCAGC	1 cut(s)	998
Bsh1236I	CGCG	6 cut(s)	1068, 1539, 1632, 1750, 1760, 2071
BshFI	GGCC	5 cut(s)	491, 1108, 1980, 1987, 1995
BshNI	GGYRCC	2 cut(s)	1327, 1424
BsiHKAI	GWGCWC	1 cut(s)	185
BsiHKCI	CYCGRG	4 cut(s)	576, 713, 1334, 2106
BslFI	GGGAC	1 cut(s)	306
BslI	CCNNNNNNNGG	6 cut(s)	498, 668, 1208, 1610, 1643, 1648
BsmBI	CGTCTC	1 cut(s)	1757
BsmFI	GGGAC	1 cut(s)	306
BsmI	GAATGC	1 cut(s)	584
BsnI	GGCC	5 cut(s)	491, 1108, 1980, 1987, 1995
Bso31I	GGTCTC	3 cut(s)	756, 2252, 2300
BsoBI	CYCGRG	4 cut(s)	576, 713, 1334, 2106
Bsp119I	TTCGAA	1 cut(s)	117
Bsp120I	GGGCCC	1 cut(s)	1978
Bsp1286I	GDGCHC	2 cut(s)	185, 1982
Bsp1407I	TGTACA	1 cut(s)	1767
Bsp143I	GATC	7 cut(s)	276, 634, 686, 1407, 1720, 1929, 1948
BspANI	GGCC	5 cut(s)	491, 1108, 1980, 1987, 1995
BspCNI	CTCAG	6 cut(s)	151, 759, 907, 1680, 1936, 2262
BspFNI	CGCG	6 cut(s)	1068, 1539, 1632, 1750, 1760, 2071
BspHI	TCATGA	1 cut(s)	388
BspLI	GGNNCC	5 cut(s)	724, 1329, 1426, 1805, 1980
BspPI	GGATC	3 cut(s)	1402, 1924, 1956
BspQI	GCTCTTC	1 cut(s)	963
BspT104I	TTCGAA	1 cut(s)	117
BspT107I	GGYRCC	2 cut(s)	1327, 1424
BspTI	CTTAAG	2 cut(s)	80, 1138
BspTNI	GGTCTC	3 cut(s)	756, 2252, 2300
BsrDI	GCAATG	4 cut(s)	855, 1305, 1857, 2100
BsrGI	TGTACA	1 cut(s)	1767
BsrI	ACTGG	2 cut(s)	2137, 2174
BssECI	CCNNGG	8 cut(s)	216, 522, 879, 945, 1428, 1604, 1642, 1982
BssMI	GATC	7 cut(s)	276, 634, 686, 1407, 1720, 1929, 1948
BssNI	GRCGYC	1 cut(s)	1328
BssT1I	CCWWGG	4 cut(s)	522, 879, 1604, 1982
Bst2UI	CCWGG	2 cut(s)	1422, 1644
Bst4CI	ACNGT	6 cut(s)	544, 758, 846, 1927, 2013, 2150
Bst6I	CTCTTC	5 cut(s)	963, 1245, 1347, 1434, 1968
BstACI	GRCGYC	1 cut(s)	1328
BstAFI	CTTAAG	2 cut(s)	80, 1138
BstAPI	GCANNNNNTGC	4 cut(s)	739, 995, 1859, 2035
BstAUI	TGTACA	1 cut(s)	1767
BstBI	TTCGAA	1 cut(s)	117
BstC8I	GCNNGC	2 cut(s)	1066, 2221
BstDEI	CTNAG	8 cut(s)	159, 270, 746, 915, 1007, 1688, 1944, 2249
BstDSI	CCRYGG	1 cut(s)	1428
BstENI	CCTNNNNNAGG	1 cut(s)	1608
BstF5I	GGATG	6 cut(s)	532, 724, 1198, 1327, 1786, 1854
BstFNI	CGCG	6 cut(s)	1068, 1539, 1632, 1750, 1760, 2071
BstH2I	RGCGCY	1 cut(s)	1331
BstHHI	GCGC	4 cut(s)	733, 1330, 1541, 1762
BstKTI	GATC	7 cut(s)	279, 637, 689, 1410, 1723, 1932, 1951
BstMBI	GATC	7 cut(s)	276, 634, 686, 1407, 1720, 1929, 1948
BstNI	CCWGG	2 cut(s)	1422, 1644
BstNSI	RCATGY	3 cut(s)	977, 1776, 2029
BstSCI	CCNGG	2 cut(s)	1420, 1642
BstSFI	CTRYAG	2 cut(s)	1702, 2326
BstSLI	GKGCMC	1 cut(s)	1982
BstUI	CGCG	6 cut(s)	1068, 1539, 1632, 1750, 1760, 2071
BstV2I	GAAGAC	1 cut(s)	17
BstXI	CCANNNNNNTGG	1 cut(s)	2297
BsuI	GTATCC	1 cut(s)	1738
BsuRI	GGCC	5 cut(s)	491, 1108, 1980, 1987, 1995
BtgI	CCRYGG	1 cut(s)	1428
BtsCI	GGATG	6 cut(s)	532, 724, 1198, 1327, 1786, 1854
BtsI	GCAGTG	1 cut(s)	1285
BtsIMutI	CAGTG	5 cut(s)	279, 754, 898, 1285, 2155
Cac8I	GCNNGC	2 cut(s)	1066, 2221
CaiI	CAGNNNCTG	1 cut(s)	995
CciI	TCATGA	1 cut(s)	388
CfoI	GCGC	4 cut(s)	733, 1330, 1541, 1762
Cfr13I	GGNCC	5 cut(s)	898, 1355, 1978, 1979, 1994
CseI	GACGC	1 cut(s)	1739
CsiI	ACCWGGT	1 cut(s)	1420
Csp6I	GTAC	4 cut(s)	264, 540, 1212, 1768
CviQI	GTAC	4 cut(s)	264, 540, 1212, 1768
DdeI	CTNAG	8 cut(s)	159, 270, 746, 915, 1007, 1688, 1944, 2249
DinI	GGCGCC	1 cut(s)	1329
DpnI	GATC	7 cut(s)	278, 636, 688, 1409, 1722, 1931, 1950
DpnII	GATC	7 cut(s)	276, 634, 686, 1407, 1720, 1929, 1948
EaeI	YGGCCR	1 cut(s)	489
Eam1104I	CTCTTC	5 cut(s)	963, 1245, 1347, 1434, 1968
EarI	CTCTTC	5 cut(s)	963, 1245, 1347, 1434, 1968
EciI	GGCGGA	1 cut(s)	1979
Eco130I	CCWWGG	4 cut(s)	522, 879, 1604, 1982
Eco24I	GRGCYC	1 cut(s)	1982
Eco31I	GGTCTC	3 cut(s)	756, 2252, 2300
Eco47I	GGWCC	2 cut(s)	898, 1355
Eco57I	CTGAAG	6 cut(s)	113, 375, 1328, 1652, 1805, 2199
Eco88I	CYCGRG	4 cut(s)	576, 713, 1334, 2106
EcoNI	CCTNNNNNAGG	1 cut(s)	1608
EcoO109I	RGGNCCY	2 cut(s)	1978, 1994
EcoRII	CCWGG	2 cut(s)	1420, 1642
EcoT14I	CCWWGG	4 cut(s)	522, 879, 1604, 1982
EcoT22I	ATGCAT	2 cut(s)	1510, 1778
EcoT38I	GRGCYC	1 cut(s)	1982
EgeI	GGCGCC	1 cut(s)	1329
EheI	GGCGCC	1 cut(s)	1329
ErhI	CCWWGG	4 cut(s)	522, 879, 1604, 1982
Esp3I	CGTCTC	1 cut(s)	1757
FalI	AAGNNNNNCTT	2 cut(s)	1267, 1299
FaqI	GGGAC	1 cut(s)	306
FauNDI	CATATG	1 cut(s)	808
FblI	GTMKAC	1 cut(s)	1705
FokI	GGATG	6 cut(s)	539, 731, 1185, 1334, 1793, 1861
FriOI	GRGCYC	1 cut(s)	1982
FspAI	RTGCGCAY	1 cut(s)	732
FspBI	CTAG	7 cut(s)	365, 980, 1058, 1245, 1316, 1349, 1605
FspI	TGCGCA	1 cut(s)	732
GlaI	GCGC	4 cut(s)	732, 1329, 1540, 1761
GsaI	CCCAGC	1 cut(s)	1002
HaeII	RGCGCY	1 cut(s)	1331
HaeIII	GGCC	5 cut(s)	491, 1108, 1980, 1987, 1995
HgaI	GACGC	1 cut(s)	1739
HhaI	GCGC	4 cut(s)	733, 1330, 1541, 1762
Hin1I	GRCGYC	1 cut(s)	1328
Hin6I	GCGC	4 cut(s)	731, 1328, 1539, 1760
HinP1I	GCGC	4 cut(s)	731, 1328, 1539, 1760
HincII	GTYRAC	1 cut(s)	559
HindII	GTYRAC	1 cut(s)	559
HindIII	AAGCTT	1 cut(s)	1550
HinfI	GANTC	8 cut(s)	5, 371, 875, 1003, 1290, 1339, 1707, 1914
HphI	GGTGA	2 cut(s)	127, 514
Hpy166II	GTNNAC	4 cut(s)	559, 1214, 1706, 1770
Hpy188I	TCNGA	8 cut(s)	355, 418, 439, 639, 762, 916, 1618, 1945
Hpy8I	GTNNAC	4 cut(s)	559, 1214, 1706, 1770
Hpy99I	CGWCG	2 cut(s)	40, 407
HpyCH4III	ACNGT	6 cut(s)	544, 758, 846, 1927, 2013, 2150
HpyCH4IV	ACGT	2 cut(s)	1220, 1395
HpyF3I	CTNAG	8 cut(s)	159, 270, 746, 915, 1007, 1688, 1944, 2249
HpySE526I	ACGT	2 cut(s)	1220, 1395
Hsp92I	GRCGYC	1 cut(s)	1328
HspAI	GCGC	4 cut(s)	731, 1328, 1539, 1760
KasI	GGCGCC	1 cut(s)	1327
Kzo9I	GATC	7 cut(s)	276, 634, 686, 1407, 1720, 1929, 1948
LguI	GCTCTTC	1 cut(s)	963
LmnI	GCTCC	4 cut(s)	188, 303, 815, 1536
LweI	GCATC	7 cut(s)	218, 992, 1517, 1578, 2057, 2083, 2089
MabI	ACCWGGT	1 cut(s)	1420
MaeI	CTAG	7 cut(s)	365, 980, 1058, 1245, 1316, 1349, 1605
MaeII	ACGT	2 cut(s)	1220, 1395
MaeIII	GTNAC	3 cut(s)	133, 872, 922
MalI	GATC	7 cut(s)	278, 636, 688, 1409, 1722, 1931, 1950
MboI	GATC	7 cut(s)	276, 634, 686, 1407, 1720, 1929, 1948
MfeI	CAATTG	2 cut(s)	666, 1206
MhlI	GDGCHC	2 cut(s)	185, 1982
MluI	ACGCGT	1 cut(s)	1748
Mly113I	GGCGCC	1 cut(s)	1328
MlyI	GAGTC	5 cut(s)	869, 1012, 1333, 1701, 1908
MmeI	TCCRAC	1 cut(s)	1226
Mph1103I	ATGCAT	2 cut(s)	1510, 1778
MroXI	GAANNNNTTC	3 cut(s)	98, 360, 2121
MseI	TTAA	7 cut(s)	81, 789, 1139, 1250, 1386, 1907, 2199
MslI	CAYNNNNRTG	3 cut(s)	1775, 2295, 2301
MspA1I	CMGCKG	4 cut(s)	692, 992, 1161, 1687
MspCI	CTTAAG	2 cut(s)	80, 1138
MspR9I	CCNGG	2 cut(s)	1422, 1644
MunI	CAATTG	2 cut(s)	666, 1206
Mva1269I	GAATGC	1 cut(s)	584
MvaI	CCWGG	2 cut(s)	1422, 1644
MvnI	CGCG	6 cut(s)	1068, 1539, 1632, 1750, 1760, 2071
NarI	GGCGCC	1 cut(s)	1328
NdeI	CATATG	1 cut(s)	808
NdeII	GATC	7 cut(s)	276, 634, 686, 1407, 1720, 1929, 1948
NlaIV	GGNNCC	5 cut(s)	724, 1329, 1426, 1805, 1980
NmeAIII	GCCGAG	2 cut(s)	241, 1045
NmuCI	GTSAC	3 cut(s)	133, 872, 922
NsbI	TGCGCA	1 cut(s)	732
NsiI	ATGCAT	2 cut(s)	1510, 1778
NspI	RCATGY	3 cut(s)	977, 1776, 2029
NspV	TTCGAA	1 cut(s)	117
PaeR7I	CTCGAG	2 cut(s)	1334, 2106
PagI	TCATGA	1 cut(s)	388
PciSI	GCTCTTC	1 cut(s)	963
PcsI	WCGNNNNNNNCGW	1 cut(s)	14
PctI	GAATGC	1 cut(s)	584
PdmI	GAANNNNTTC	3 cut(s)	98, 360, 2121
PfeI	GAWTC	2 cut(s)	371, 1290
PflMI	CCANNNNNTGG	1 cut(s)	1208
PleI	GAGTC	5 cut(s)	869, 1011, 1333, 1701, 1908
PluTI	GGCGCC	1 cut(s)	1331
PpsI	GAGTC	5 cut(s)	869, 1011, 1333, 1701, 1908
PshBI	ATTAAT	1 cut(s)	1907
PsiI	TTATAA	2 cut(s)	549, 2090
Psp6I	CCWGG	2 cut(s)	1420, 1642
PspFI	CCCAGC	1 cut(s)	998
PspGI	CCWGG	2 cut(s)	1420, 1642
PspN4I	GGNNCC	5 cut(s)	724, 1329, 1426, 1805, 1980
PspOMI	GGGCCC	1 cut(s)	1978
PspPI	GGNCC	5 cut(s)	898, 1355, 1978, 1979, 1994
PspXI	VCTCGAGB	1 cut(s)	2106
PsrI	GAACNNNNNNTAC	2 cut(s)	57, 89
PstNI	CAGNNNCTG	1 cut(s)	995
PvuII	CAGCTG	3 cut(s)	692, 1161, 1687
RsaI	GTAC	4 cut(s)	265, 541, 1213, 1769
RsaNI	GTAC	4 cut(s)	264, 540, 1212, 1768
RseI	CAYNNNNRTG	3 cut(s)	1775, 2295, 2301
SapI	GCTCTTC	1 cut(s)	963
SaqAI	TTAA	7 cut(s)	81, 789, 1139, 1250, 1386, 1907, 2199
Sau3AI	GATC	7 cut(s)	276, 634, 686, 1407, 1720, 1929, 1948
Sau96I	GGNCC	5 cut(s)	898, 1355, 1978, 1979, 1994
SchI	GAGTC	5 cut(s)	869, 1012, 1333, 1701, 1908
ScrFI	CCNGG	2 cut(s)	1422, 1644
SduI	GDGCHC	2 cut(s)	185, 1982
SexAI	ACCWGGT	1 cut(s)	1420
SfaNI	GCATC	7 cut(s)	218, 992, 1517, 1578, 2057, 2083, 2089
SfcI	CTRYAG	2 cut(s)	1702, 2326
SfoI	GGCGCC	1 cut(s)	1329
Sfr274I	CTCGAG	2 cut(s)	1334, 2106
SfuI	TTCGAA	1 cut(s)	117
SinI	GGWCC	2 cut(s)	898, 1355
SlaI	CTCGAG	2 cut(s)	1334, 2106
SmiMI	CAYNNNNRTG	3 cut(s)	1775, 2295, 2301
SmlI	CTYRAG	6 cut(s)	80, 287, 327, 1138, 1334, 2106
SmoI	CTYRAG	6 cut(s)	80, 287, 327, 1138, 1334, 2106
SspDI	GGCGCC	1 cut(s)	1327
SspMI	CTAG	7 cut(s)	365, 980, 1058, 1245, 1316, 1349, 1605
StyD4I	CCNGG	2 cut(s)	1420, 1642
StyI	CCWWGG	4 cut(s)	522, 879, 1604, 1982
TaaI	ACNGT	6 cut(s)	544, 758, 846, 1927, 2013, 2150
TaiI	ACGT	2 cut(s)	1223, 1398
TaqI	TCGA	9 cut(s)	8, 38, 117, 685, 1116, 1335, 1586, 2107, 2115
TaqII	GACCGA	1 cut(s)	959
TatI	WGTACW	1 cut(s)	1767
TauI	GCSGC	5 cut(s)	995, 1632, 1663, 1666, 2074
TfiI	GAWTC	2 cut(s)	371, 1290
Tru1I	TTAA	7 cut(s)	81, 789, 1139, 1250, 1386, 1907, 2199
Tru9I	TTAA	7 cut(s)	81, 789, 1139, 1250, 1386, 1907, 2199
TscAI	CASTG	5 cut(s)	286, 761, 898, 1285, 2155
TseFI	GTSAC	3 cut(s)	133, 872, 922
Tsp45I	GTSAC	3 cut(s)	133, 872, 922
TspGWI	ACGGA	2 cut(s)	251, 1934
TspRI	CASTG	5 cut(s)	286, 761, 898, 1285, 2155
Van91I	CCANNNNNTGG	1 cut(s)	1208
Vha464I	CTTAAG	2 cut(s)	80, 1138
VpaK11BI	GGWCC	2 cut(s)	898, 1355
VspI	ATTAAT	1 cut(s)	1907
XagI	CCTNNNNNAGG	1 cut(s)	1608
XapI	RAATTY	3 cut(s)	49, 128, 461
XbaI	TCTAGA	1 cut(s)	1315
XceI	RCATGY	3 cut(s)	977, 1776, 2029
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1418, 1650, 2166
XhoI	CTCGAG	2 cut(s)	1334, 2106
XmaJI	CCTAGG	1 cut(s)	1604
XmiI	GTMKAC	1 cut(s)	1705
XmnI	GAANNNNTTC	3 cut(s)	98, 360, 2121
XspI	CTAG	7 cut(s)	365, 980, 1058, 1245, 1316, 1349, 1605
Zsp2I	ATGCAT	2 cut(s)	1510, 1778

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.