Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000050.1

Orthogroup ID

OG0016002

Physical Location & Seq

Genomic Coordinates Forward (+)

159260 .. 165026

Gene Structure 5767 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000050.1_g000042.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2478 bp

atgatccatgaccagaggcatgtcggcgctggaaagaggattcaaacccaactgatgagccaccgtattgtggcccgatggctcagaaccgtccgggtcgtcgagctcgagaagcgggtcgagaccgacatgatgtggtctgctaccggacaggtgattgatgctattgctcggagaagtttttgggaggactgttttcgctcgaggtttcgacgaaggtcactgggcgttgttatctggaacacagtggtcatcttgtacaattggtcggcgcttcgtcaggggcttccaggacagcagcatggtggtacaggtcgcaaaggctatggcggtatgggtcatggaggctgtggttgcgtggtcgagaggcactgcaccggagctgtactagcgtttatcagtacatctaaggagatcactgaccttgagggacagctcctttccatgagaaatctcttatctactcaagcagctttagttcatggtttatctgaaggagttctagttgattcaatgtctgcttctcatgatgattatgacgacgaggacacatctgatgaaaacagacccctttccgagacagaaaaatggtttgcagaatttttggacactctggaagtcctattggccgaaagaagggtgaatgaagctatggctgccttggatgaaggagagcgtacagtttataaagctgttgacaagcgaactataacccgagctgcattcttgtcattccagactaccatcaatggacagagacaaagattagtagatcagattgcagagactatgttgcagccttcaattggtgctgatgagcttcgatcagctgctgtagctctcaaaaagctcggggatggttcccgtgcgcatacgctgctgctcaggtctcaccgtcagaagttgcagtctaatatgaaaaaccttaattcctcaaccacttcatatggaggagcatacatcactacattatcgcaaatactgtttcgtttcattgcacaagcagcaagtgactccttggcggttttcagtgaggaccatgcttatacatctgagcttgtgacatgggcagtcaaacagaccgaggcttatgctcttctactgaagaggcatgttctagcatcagcagcggctgctgggagtctaagtgttgctgccgagtgtgttcatatatgcttgggtcattgttctttgctagaagctcgcggattgtgcctctctcctgttctgttgagactatttaggccatttgtcgaacaggcattgagctgcaacttaaggagaattgaacaaagcagctgtgcattagctgttgaggacgattggtttcttcttcatccaacaattggtacacgccctttgggttctgcttcatctcttcctagtttaagtgcaaaccagccaaagctttcaagcagtgcttacagattcaatgcaatggttcaggaacttctagaggatgtggcacccctcgagactcttcagctagatggtccagcattagaaggcgttttacaagtgtttaactcctatgtcaatttgctgatccatgcactacctggtgccgtggagagcgaagaggaagttcctataattgttagcatggcagagacagaagcacaacagatggctttgttagctaatgcatcattgttagcagacgagctgctcccacgcgctgccatgaagcttttgcccttccagcagggtcaaactaacaggtcgatgccagagatgacccctaggagaggttcggacaaacaaagccgcgttccagacccaggcagggaatggaagcggcggcttcagcgttcggttgaacagctgagagatagcttctgtagactccatgctcttgatctcatcttcacagaagatggggatacgcgtctcaacgcgcaaatgtacacatgcatggatgaaagtgtagagcctgaatggttcccatctccaattcttcaggaactctttgcaaagctgacaaggatggcaaacattgcaactgatatgtttgtgggaagggaaaggtttgcaactatcttattaatgagactcacggagactgtgatcctctggctttccgacgatcaaaacttttgggcggagatagaagagggcccaaggccattaggccctcttggacttcaacagttctatttggacatgcagtttgtgctgctttttgcatcacaaggcagatacctatcgcggcatctgcatcaagttataaaaaacatcattgctcgagctatcgaagcggttcatgctactggaatagacccttacagtgtattgccagaagatgactggtttgctgaagtagctcaaattgcaattaaaatgttgattgggaaagccagcttctccaatgtagaagaagatggtctcagccccacttattcaatgtcaggaaaatctccatctatccattctcatgggagtgagaccaatcttgcccaccactatagagagcagtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000145 GO:0001927 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005938 GO:0006810 GO:0006887 GO:0006904 GO:0008104 GO:0008150 GO:0009987 GO:0016043 GO:0016192 GO:0022406 GO:0022607 GO:0031503 GO:0032940 GO:0032991 GO:0033036 GO:0034613 GO:0034622 GO:0034629 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044448 GO:0044464 GO:0046903 GO:0048278 GO:0051179 GO:0051234 GO:0051601 GO:0051640 GO:0051641 GO:0065003 GO:0070727 GO:0071840 GO:0071944 GO:0099023 GO:0099568 GO:0140029 GO:0140056

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Exo84_C Vps51

Protein Analysis

825

Amino Acids

92.02

Weight (kDa)

5.83

Isoelectric Point (pI)

54.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016002)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10385
fragaria_vesca	FvH4_4g35500
malus_domestica	MD13G1082700.v1.1
prunus_persica	Prupe.1G264200_v2.0.a1
pyrus_communis	pycom13g07130
rosa_chinensis	RchiOBHm_Chr4g0445151
rosa_laevigata	RLG00000005763
rosa_multiflora	Rmu_sc0000050.1_g000042
rosa_roxburghii	Rroxscaffold_5G00385670
rosa_rugosa	Rorug04G0359400
rosa_samantha	Rh4AG420200 Rh4BG432000 Rh4CG446600 Rh4DG428100
rosa_wichuraiana	Rw4G036030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	687, 2228
Acc16I	TGCGCA	1 cut(s)	870
AccB1I	GGYRCC	2 cut(s)	1465, 1562
AccB7I	CCANNNNNTGG	1 cut(s)	1346
AccI	GTMKAC	1 cut(s)	1843
AccII	CGCG	6 cut(s)	1206, 1677, 1770, 1888, 1898, 2209
AclWI	GGATC	2 cut(s)	1540, 2062
AcoI	YGGCCR	1 cut(s)	627
AcsI	RAATTY	1 cut(s)	599
AcuI	CTGAAG	6 cut(s)	513, 1124, 1466, 1790, 1943, 2337
AfaI	GTAC	7 cut(s)	260, 310, 387, 403, 679, 1351, 1907
AfiI	CCNNNNNNNGG	7 cut(s)	70, 636, 806, 1346, 1748, 1781, 1786
AflII	CTTAAG	1 cut(s)	1276
AflIII	ACRYGT	1 cut(s)	1886
AgsI	TTSAA	9 cut(s)	44, 513, 804, 1289, 1413, 1432, 1820, 2147, 2403
AjnI	CCWGG	3 cut(s)	289, 1558, 1780
Alw21I	GWGCWC	1 cut(s)	108
AlwI	GGATC	2 cut(s)	1540, 2062
AlwNI	CAGNNNCTG	2 cut(s)	833, 1133
Ama87I	CYCGRG	6 cut(s)	107, 202, 714, 851, 1472, 2244
AoxI	GGCC	6 cut(s)	72, 627, 1244, 2116, 2123, 2131
ApaI	GGGCCC	1 cut(s)	2120
ApoI	RAATTY	1 cut(s)	599
ArsI	GACNNNNNNTTYG	2 cut(s)	2153, 2185
AseI	ATTAAT	1 cut(s)	2045
Asp700I	GAANNNNTTC	2 cut(s)	498, 2259
AspA2I	CCTAGG	1 cut(s)	1742
AspLEI	GCGC	5 cut(s)	29, 274, 871, 1679, 1900
AspS9I	GGNCC	6 cut(s)	73, 1036, 1493, 2116, 2117, 2132
AsuC2I	CCSGG	1 cut(s)	95
AsuHPI	GGTGA	3 cut(s)	166, 652, 884
AvaI	CYCGRG	6 cut(s)	107, 202, 714, 851, 1472, 2244
AvaII	GGWCC	2 cut(s)	1036, 1493
AvrII	CCTAGG	1 cut(s)	1742
BaeGI	GKGCMC	1 cut(s)	2120
BanI	GGYRCC	2 cut(s)	1465, 1562
BanII	GRGCYC	2 cut(s)	108, 2120
BarI	GAAGNNNNNNTAC	2 cut(s)	1497, 1529
Bbv12I	GWGCWC	1 cut(s)	108
BceAI	ACGGC	1 cut(s)	1550
BcgI	CGANNNNNNTGC	2 cut(s)	1073, 1107
BciT130I	CCWGG	3 cut(s)	291, 1560, 1782
BciVI	GTATCC	1 cut(s)	1876
BcnI	CCSGG	1 cut(s)	95
BfaI	CTAG	8 cut(s)	389, 503, 1118, 1196, 1383, 1454, 1487, 1743
BfmI	CTRYAG	3 cut(s)	834, 1840, 2464
BfoI	RGCGCY	2 cut(s)	30, 275
BfrI	CTTAAG	1 cut(s)	1276
BfuI	GTATCC	1 cut(s)	1876
BlnI	CCTAGG	1 cut(s)	1742
Bme1390I	CCNGG	4 cut(s)	95, 291, 1560, 1782
Bme18I	GGWCC	2 cut(s)	1036, 1493
BmeT110I	CYCGRG	6 cut(s)	107, 202, 714, 851, 1472, 2244
BmgT120I	GGNCC	6 cut(s)	73, 1036, 1493, 2116, 2117, 2132
BmiI	GGNNCC	5 cut(s)	862, 1467, 1564, 1943, 2118
BmrFI	CCNGG	4 cut(s)	95, 291, 1560, 1782
BmrI	ACTGGG	1 cut(s)	233
BmsI	GCATC	7 cut(s)	151, 1130, 1655, 1716, 2195, 2221, 2227
BmuI	ACTGGG	1 cut(s)	233
BoxI	GACNNNNGTC	1 cut(s)	217
Bpu10I	CCTNAGC	1 cut(s)	884
BpuEI	CTTGAG	2 cut(s)	446, 450
BpuMI	CCSGG	1 cut(s)	95
BsaBI	GATNNNNATC	1 cut(s)	2203
BsaI	GGTCTC	4 cut(s)	116, 894, 2390, 2438
BsaJI	CCNNGG	7 cut(s)	660, 1017, 1083, 1566, 1742, 1780, 2120
BsaWI	WCCGGW	2 cut(s)	146, 377
BsaXI	ACNNNNNCTCC	4 cut(s)	489, 519, 1132, 1162
Bsc4I	CCNNNNNNNGG	7 cut(s)	70, 636, 806, 1346, 1748, 1781, 1786
Bse1I	ACTGG	3 cut(s)	228, 2275, 2312
Bse3DI	GCAATG	4 cut(s)	993, 1443, 1995, 2238
Bse8I	GATNNNNATC	1 cut(s)	2203
BseBI	CCWGG	3 cut(s)	291, 1560, 1782
BseDI	CCNNGG	7 cut(s)	660, 1017, 1083, 1566, 1742, 1780, 2120
BseGI	GGATG	6 cut(s)	670, 862, 1336, 1465, 1924, 1992
BseJI	GATNNNNATC	1 cut(s)	2203
BseLI	CCNNNNNNNGG	7 cut(s)	70, 636, 806, 1346, 1748, 1781, 1786
BseMI	GCAATG	4 cut(s)	993, 1443, 1995, 2238
BseMII	CTCAG	5 cut(s)	97, 898, 1044, 1817, 2401
BseNI	ACTGG	3 cut(s)	228, 2275, 2312
BseRI	GAGGAG	1 cut(s)	966
BseSI	GKGCMC	1 cut(s)	2120
BseYI	CCCAGC	1 cut(s)	1136
BsgI	GTGCAG	1 cut(s)	358
Bsh1236I	CGCG	6 cut(s)	1206, 1677, 1770, 1888, 1898, 2209
BshFI	GGCC	6 cut(s)	74, 629, 1246, 2118, 2125, 2133
BshNI	GGYRCC	2 cut(s)	1465, 1562
BsiHKAI	GWGCWC	1 cut(s)	108
BsiHKCI	CYCGRG	6 cut(s)	107, 202, 714, 851, 1472, 2244
BsiSI	CCGG	3 cut(s)	94, 147, 378
BslFI	GGGAC	1 cut(s)	444
BslI	CCNNNNNNNGG	7 cut(s)	70, 636, 806, 1346, 1748, 1781, 1786
BsmBI	CGTCTC	1 cut(s)	1895
BsmFI	GGGAC	1 cut(s)	444
BsmI	GAATGC	1 cut(s)	722
BsnI	GGCC	6 cut(s)	74, 629, 1246, 2118, 2125, 2133
Bso31I	GGTCTC	4 cut(s)	116, 894, 2390, 2438
BsoBI	CYCGRG	6 cut(s)	107, 202, 714, 851, 1472, 2244
Bsp120I	GGGCCC	1 cut(s)	2116
Bsp1286I	GDGCHC	2 cut(s)	108, 2120
Bsp1407I	TGTACA	2 cut(s)	258, 1905
Bsp143I	GATC	8 cut(s)	3, 414, 772, 824, 1545, 1858, 2067, 2086
BspANI	GGCC	6 cut(s)	74, 629, 1246, 2118, 2125, 2133
BspCNI	CTCAG	5 cut(s)	96, 897, 1045, 1818, 2400
BspFNI	CGCG	6 cut(s)	1206, 1677, 1770, 1888, 1898, 2209
BspHI	TCATGA	1 cut(s)	526
BspLI	GGNNCC	5 cut(s)	862, 1467, 1564, 1943, 2118
BspPI	GGATC	2 cut(s)	1540, 2062
BspQI	GCTCTTC	1 cut(s)	1101
BspT107I	GGYRCC	2 cut(s)	1465, 1562
BspTI	CTTAAG	1 cut(s)	1276
BspTNI	GGTCTC	4 cut(s)	116, 894, 2390, 2438
BsrDI	GCAATG	4 cut(s)	993, 1443, 1995, 2238
BsrGI	TGTACA	2 cut(s)	258, 1905
BsrI	ACTGG	3 cut(s)	228, 2275, 2312
BssECI	CCNNGG	7 cut(s)	660, 1017, 1083, 1566, 1742, 1780, 2120
BssMI	GATC	8 cut(s)	3, 414, 772, 824, 1545, 1858, 2067, 2086
BssT1I	CCWWGG	4 cut(s)	660, 1017, 1742, 2120
Bst2UI	CCWGG	3 cut(s)	291, 1560, 1782
Bst6I	CTCTTC	6 cut(s)	1100, 1101, 1383, 1485, 1572, 2106
BstAFI	CTTAAG	1 cut(s)	1276
BstAPI	GCANNNNNTGC	4 cut(s)	877, 1133, 1997, 2173
BstAUI	TGTACA	2 cut(s)	258, 1905
BstC8I	GCNNGC	2 cut(s)	1204, 2359
BstDEI	CTNAG	7 cut(s)	83, 408, 884, 1053, 1145, 1826, 2387
BstDSI	CCRYGG	1 cut(s)	1566
BstENI	CCTNNNNNAGG	1 cut(s)	1746
BstF5I	GGATG	6 cut(s)	670, 862, 1336, 1465, 1924, 1992
BstFNI	CGCG	6 cut(s)	1206, 1677, 1770, 1888, 1898, 2209
BstH2I	RGCGCY	2 cut(s)	30, 275
BstHHI	GCGC	5 cut(s)	29, 274, 871, 1679, 1900
BstKTI	GATC	8 cut(s)	6, 417, 775, 827, 1548, 1861, 2070, 2089
BstMBI	GATC	8 cut(s)	3, 414, 772, 824, 1545, 1858, 2067, 2086
BstNI	CCWGG	3 cut(s)	291, 1560, 1782
BstNSI	RCATGY	4 cut(s)	23, 1115, 1914, 2167
BstPAI	GACNNNNGTC	1 cut(s)	217
BstSCI	CCNGG	4 cut(s)	93, 289, 1558, 1780
BstSFI	CTRYAG	3 cut(s)	834, 1840, 2464
BstSLI	GKGCMC	1 cut(s)	2120
BstUI	CGCG	6 cut(s)	1206, 1677, 1770, 1888, 1898, 2209
BstXI	CCANNNNNNTGG	1 cut(s)	2435
BsuI	GTATCC	1 cut(s)	1876
BsuRI	GGCC	6 cut(s)	74, 629, 1246, 2118, 2125, 2133
BtgI	CCRYGG	1 cut(s)	1566
BtsCI	GGATG	6 cut(s)	670, 862, 1336, 1465, 1924, 1992
BtsI	GCAGTG	2 cut(s)	370, 1423
BtsIMutI	CAGTG	7 cut(s)	221, 252, 370, 417, 1036, 1423, 2293
Cac8I	GCNNGC	2 cut(s)	1204, 2359
CaiI	CAGNNNCTG	2 cut(s)	833, 1133
CciI	TCATGA	1 cut(s)	526
CfoI	GCGC	5 cut(s)	29, 274, 871, 1679, 1900
Cfr13I	GGNCC	6 cut(s)	73, 1036, 1493, 2116, 2117, 2132
CseI	GACGC	1 cut(s)	1877
CsiI	ACCWGGT	1 cut(s)	1558
Csp6I	GTAC	7 cut(s)	259, 309, 386, 402, 678, 1350, 1906
CviQI	GTAC	7 cut(s)	259, 309, 386, 402, 678, 1350, 1906
DdeI	CTNAG	7 cut(s)	83, 408, 884, 1053, 1145, 1826, 2387
DpnI	GATC	8 cut(s)	5, 416, 774, 826, 1547, 1860, 2069, 2088
DpnII	GATC	8 cut(s)	3, 414, 772, 824, 1545, 1858, 2067, 2086
EaeI	YGGCCR	1 cut(s)	627
Eam1104I	CTCTTC	6 cut(s)	1100, 1101, 1383, 1485, 1572, 2106
EarI	CTCTTC	6 cut(s)	1100, 1101, 1383, 1485, 1572, 2106
EciI	GGCGGA	1 cut(s)	2117
Ecl136II	GAGCTC	1 cut(s)	106
Eco130I	CCWWGG	4 cut(s)	660, 1017, 1742, 2120
Eco24I	GRGCYC	2 cut(s)	108, 2120
Eco31I	GGTCTC	4 cut(s)	116, 894, 2390, 2438
Eco47I	GGWCC	2 cut(s)	1036, 1493
Eco53kI	GAGCTC	1 cut(s)	106
Eco57I	CTGAAG	6 cut(s)	513, 1124, 1466, 1790, 1943, 2337
Eco88I	CYCGRG	6 cut(s)	107, 202, 714, 851, 1472, 2244
EcoICRI	GAGCTC	1 cut(s)	106
EcoNI	CCTNNNNNAGG	1 cut(s)	1746
EcoO109I	RGGNCCY	2 cut(s)	2116, 2132
EcoRII	CCWGG	3 cut(s)	289, 1558, 1780
EcoT14I	CCWWGG	4 cut(s)	660, 1017, 1742, 2120
EcoT22I	ATGCAT	2 cut(s)	1648, 1916
EcoT38I	GRGCYC	2 cut(s)	108, 2120
ErhI	CCWWGG	4 cut(s)	660, 1017, 1742, 2120
Esp3I	CGTCTC	1 cut(s)	1895
FalI	AAGNNNNNCTT	2 cut(s)	1405, 1437
FaqI	GGGAC	1 cut(s)	444
FauI	CCCGC	1 cut(s)	108
FauNDI	CATATG	1 cut(s)	946
FblI	GTMKAC	1 cut(s)	1843
FokI	GGATG	6 cut(s)	677, 869, 1323, 1472, 1931, 1999
FriOI	GRGCYC	2 cut(s)	108, 2120
FspAI	RTGCGCAY	1 cut(s)	870
FspBI	CTAG	8 cut(s)	389, 503, 1118, 1196, 1383, 1454, 1487, 1743
FspI	TGCGCA	1 cut(s)	870
GlaI	GCGC	5 cut(s)	28, 273, 870, 1678, 1899
GsaI	CCCAGC	1 cut(s)	1140
HaeII	RGCGCY	2 cut(s)	30, 275
HaeIII	GGCC	6 cut(s)	74, 629, 1246, 2118, 2125, 2133
HapII	CCGG	3 cut(s)	94, 147, 378
HgaI	GACGC	1 cut(s)	1877
HhaI	GCGC	5 cut(s)	29, 274, 871, 1679, 1900
Hin6I	GCGC	5 cut(s)	27, 272, 869, 1677, 1898
HinP1I	GCGC	5 cut(s)	27, 272, 869, 1677, 1898
HincII	GTYRAC	1 cut(s)	697
HindII	GTYRAC	1 cut(s)	697
HindIII	AAGCTT	2 cut(s)	1406, 1688
HinfI	GANTC	8 cut(s)	40, 509, 1013, 1141, 1428, 1477, 1845, 2052
HpaII	CCGG	3 cut(s)	94, 147, 378
HphI	GGTGA	3 cut(s)	166, 652, 884
Hpy166II	GTNNAC	4 cut(s)	697, 1352, 1844, 1908
Hpy8I	GTNNAC	4 cut(s)	697, 1352, 1844, 1908
Hpy99I	CGWCG	4 cut(s)	104, 216, 545, 2087
HpyAV	CCTTC	8 cut(s)	210, 488, 630, 662, 810, 1499, 1708, 2013
HpyF3I	CTNAG	7 cut(s)	83, 408, 884, 1053, 1145, 1826, 2387
HspAI	GCGC	5 cut(s)	27, 272, 869, 1677, 1898
Kzo9I	GATC	8 cut(s)	3, 414, 772, 824, 1545, 1858, 2067, 2086
LguI	GCTCTTC	1 cut(s)	1101
LmnI	GCTCC	4 cut(s)	380, 441, 953, 1674
LweI	GCATC	7 cut(s)	151, 1130, 1655, 1716, 2195, 2221, 2227
MabI	ACCWGGT	1 cut(s)	1558
MaeI	CTAG	8 cut(s)	389, 503, 1118, 1196, 1383, 1454, 1487, 1743
MaeIII	GTNAC	3 cut(s)	219, 1010, 1060
MalI	GATC	8 cut(s)	5, 416, 774, 826, 1547, 1860, 2069, 2088
MboI	GATC	8 cut(s)	3, 414, 772, 824, 1545, 1858, 2067, 2086
MfeI	CAATTG	3 cut(s)	262, 804, 1344
MhlI	GDGCHC	2 cut(s)	108, 2120
MluI	ACGCGT	1 cut(s)	1886
MlyI	GAGTC	5 cut(s)	1007, 1150, 1471, 1839, 2046
MmeI	TCCRAC	2 cut(s)	1364, 2106
Mph1103I	ATGCAT	2 cut(s)	1648, 1916
MroXI	GAANNNNTTC	2 cut(s)	498, 2259
MseI	TTAA	6 cut(s)	927, 1277, 1388, 1524, 2045, 2337
MslI	CAYNNNNRTG	3 cut(s)	1913, 2433, 2439
MspA1I	CMGCKG	4 cut(s)	830, 1130, 1299, 1825
MspCI	CTTAAG	1 cut(s)	1276
MspI	CCGG	3 cut(s)	94, 147, 378
MspR9I	CCNGG	4 cut(s)	95, 291, 1560, 1782
MunI	CAATTG	3 cut(s)	262, 804, 1344
Mva1269I	GAATGC	1 cut(s)	722
MvaI	CCWGG	3 cut(s)	291, 1560, 1782
MvnI	CGCG	6 cut(s)	1206, 1677, 1770, 1888, 1898, 2209
NciI	CCSGG	1 cut(s)	95
NdeI	CATATG	1 cut(s)	946
NdeII	GATC	8 cut(s)	3, 414, 772, 824, 1545, 1858, 2067, 2086
NlaIV	GGNNCC	5 cut(s)	862, 1467, 1564, 1943, 2118
NmeAIII	GCCGAG	1 cut(s)	1183
NmuCI	GTSAC	3 cut(s)	219, 1010, 1060
NsbI	TGCGCA	1 cut(s)	870
NsiI	ATGCAT	2 cut(s)	1648, 1916
NspI	RCATGY	4 cut(s)	23, 1115, 1914, 2167
PaeR7I	CTCGAG	4 cut(s)	107, 202, 1472, 2244
PagI	TCATGA	1 cut(s)	526
PciSI	GCTCTTC	1 cut(s)	1101
PcsI	WCGNNNNNNNCGW	1 cut(s)	105
PctI	GAATGC	1 cut(s)	722
PdmI	GAANNNNTTC	2 cut(s)	498, 2259
PfeI	GAWTC	3 cut(s)	40, 509, 1428
PflMI	CCANNNNNTGG	1 cut(s)	1346
PfoI	TCCNGGA	1 cut(s)	289
PleI	GAGTC	5 cut(s)	1007, 1149, 1471, 1839, 2046
PpsI	GAGTC	5 cut(s)	1007, 1149, 1471, 1839, 2046
PshAI	GACNNNNGTC	1 cut(s)	217
PshBI	ATTAAT	1 cut(s)	2045
PsiI	TTATAA	2 cut(s)	687, 2228
Psp124BI	GAGCTC	1 cut(s)	108
Psp6I	CCWGG	3 cut(s)	289, 1558, 1780
PspFI	CCCAGC	1 cut(s)	1136
PspGI	CCWGG	3 cut(s)	289, 1558, 1780
PspN4I	GGNNCC	5 cut(s)	862, 1467, 1564, 1943, 2118
PspOMI	GGGCCC	1 cut(s)	2116
PspPI	GGNCC	6 cut(s)	73, 1036, 1493, 2116, 2117, 2132
PspXI	VCTCGAGB	2 cut(s)	202, 2244
PstNI	CAGNNNCTG	2 cut(s)	833, 1133
PvuII	CAGCTG	3 cut(s)	830, 1299, 1825
RsaI	GTAC	7 cut(s)	260, 310, 387, 403, 679, 1351, 1907
RsaNI	GTAC	7 cut(s)	259, 309, 386, 402, 678, 1350, 1906
RseI	CAYNNNNRTG	3 cut(s)	1913, 2433, 2439
SacI	GAGCTC	1 cut(s)	108
SapI	GCTCTTC	1 cut(s)	1101
SaqAI	TTAA	6 cut(s)	927, 1277, 1388, 1524, 2045, 2337
Sau3AI	GATC	8 cut(s)	3, 414, 772, 824, 1545, 1858, 2067, 2086
Sau96I	GGNCC	6 cut(s)	73, 1036, 1493, 2116, 2117, 2132
SchI	GAGTC	5 cut(s)	1007, 1150, 1471, 1839, 2046
ScrFI	CCNGG	4 cut(s)	95, 291, 1560, 1782
SduI	GDGCHC	2 cut(s)	108, 2120
SexAI	ACCWGGT	1 cut(s)	1558
SfaNI	GCATC	7 cut(s)	151, 1130, 1655, 1716, 2195, 2221, 2227
SfcI	CTRYAG	3 cut(s)	834, 1840, 2464
Sfr274I	CTCGAG	4 cut(s)	107, 202, 1472, 2244
SinI	GGWCC	2 cut(s)	1036, 1493
SlaI	CTCGAG	4 cut(s)	107, 202, 1472, 2244
SmiMI	CAYNNNNRTG	3 cut(s)	1913, 2433, 2439
SmlI	CTYRAG	7 cut(s)	107, 202, 425, 465, 1276, 1472, 2244
SmoI	CTYRAG	7 cut(s)	107, 202, 425, 465, 1276, 1472, 2244
SspMI	CTAG	8 cut(s)	389, 503, 1118, 1196, 1383, 1454, 1487, 1743
SstI	GAGCTC	1 cut(s)	108
StyD4I	CCNGG	4 cut(s)	93, 289, 1558, 1780
StyI	CCWWGG	4 cut(s)	660, 1017, 1742, 2120
TaqII	GACCGA	2 cut(s)	140, 1097
TatI	WGTACW	4 cut(s)	258, 385, 401, 1905
TauI	GCSGC	5 cut(s)	1133, 1770, 1801, 1804, 2212
TfiI	GAWTC	3 cut(s)	40, 509, 1428
Tru1I	TTAA	6 cut(s)	927, 1277, 1388, 1524, 2045, 2337
Tru9I	TTAA	6 cut(s)	927, 1277, 1388, 1524, 2045, 2337
TscAI	CASTG	7 cut(s)	228, 252, 377, 424, 1036, 1423, 2293
TseFI	GTSAC	3 cut(s)	219, 1010, 1060
Tsp45I	GTSAC	3 cut(s)	219, 1010, 1060
TspGWI	ACGGA	1 cut(s)	2072
TspRI	CASTG	7 cut(s)	228, 252, 377, 424, 1036, 1423, 2293
Van91I	CCANNNNNTGG	1 cut(s)	1346
Vha464I	CTTAAG	1 cut(s)	1276
VpaK11BI	GGWCC	2 cut(s)	1036, 1493
VspI	ATTAAT	1 cut(s)	2045
XagI	CCTNNNNNAGG	1 cut(s)	1746
XapI	RAATTY	1 cut(s)	599
XbaI	TCTAGA	1 cut(s)	1453
XceI	RCATGY	4 cut(s)	23, 1115, 1914, 2167
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1556, 1788, 2304
XhoI	CTCGAG	4 cut(s)	107, 202, 1472, 2244
XmaJI	CCTAGG	1 cut(s)	1742
XmiI	GTMKAC	1 cut(s)	1843
XmnI	GAANNNNTTC	2 cut(s)	498, 2259
XspI	CTAG	8 cut(s)	389, 503, 1118, 1196, 1383, 1454, 1487, 1743
Zsp2I	ATGCAT	2 cut(s)	1648, 1916

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.