Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0016002

Physical Location & Seq

Genomic Coordinates Reverse (-)

63342690 .. 63348849

Gene Structure 6160 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG428100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2181 bp

ATGTTTGATACTAAACTCAAAAGGCAGAATGAATTGTTATCATCCAAGTCATACCATGATGTAGTTAATTACAAGTTTATCTCCATGTGTTCTATCATTTGCAGTACATCTAAGGAGATCACTGACCTTGAGGGACAGCTCCTTTCCATGAGAAATCTCTTATCTACTCAAGCAGCTTTAGTTCATGGTTTATCTGAAGGAGTTCTAGTTGATTCAATGTCTGCTTCTCATGATGATTATGACGACGAGGACACATCTGATGAAAACAGACCCCTTTCCGAGACAGAAAAATGGTTTGCAGAATTTTTGGACACTCTGGAAGTCCTATTGGCCGAAAGAAGGGTGAATGAAGCTATGGCTGCCTTGGATGAAGGAGAGCGTACAGTTTATAAAGCTGTTGACAAGCGAACTATAACCCGAGCTGCATTCTTGTCATTCCAGACTACCATCAATGGACAGAGACAAAGATTAGTAGATCAGATTGCAGAGACTATGTTGCAGCCTTCAATTGGTGCTGATGAGCTTCGATCAGCTGTTGTAGCTCTCAAAAAGCTCGGGGATGGTTCCCGTGCGCATACGCTGCTGCTCAGGTCTCACTGTCAGAAGTTGCAGTCTAATATGAAAAACCTTAATTCCTCAACCACTTCATATGGAGGAGCATACATCACTACATTATCGCAAATACTGTTTCGTTTCATTGCACAAGCAGCAAGTGACTCCTTGGCGGTTTTCAGTGAGGACCATGCTTATACATCTGAGCTTGTGACATGGGCAGTCAAACAGACCGAGGCTTATGCTCTTCTACTAAAGAGGCATGTTCTAGCATCAGCAGCGGCTGCTGGGAGTCTAAGTGTTGCTGCCGAGTGTGTTCATATATGCTTGGGTCATTGTTCTTTGCTAGAAGCTCGCGGATTGTGCCTCTCTCCTGTTCTGTTGAGACTATTTAGGCCATTTGTCGAACAGGCATTGAGCTGCAACTTAAGGAGAATTGAACAAAGCAGCTGTGCATTAGCTGTTGCGGACGATTGGTTTCTTCTTCATCCAACAATTGGTACACGCACGTTGGGTTCTACTTCCTCTCTTCCTAGTTTAAGTGCAAACCAGCCAAAACTTTCAAGCAGTGCTTACAGATTCAATGCAATGGTTCAGGAACTTCTAGAGGATGTGGCGCCCCTCGAGACTCTTCAGCTAGATGGTCCAGCATTAGAAGGCGTTTTACAAGTGTTTAACTCCTACGTCAATTTGCTGATCCATGCACTACCTGGTGCCGTGGAGAGCGAAGAGGAAGTTCCTATAATTGTTAGCATGGCAGAGACAGAAGCACAACAGATGGCTTTGTTAGCTAATGCATCATTGTTAGCAGACGAGCTGCTCCCACGCGCTGCCATGAAGCTTTTGCCCTTCCAGCAGGGTCAAACTAACAGGTCGATGCCAGAGATGACCCCTAGGAGAGGTTCGGACAAACAAAGCCGCGTTCCAGACCCAGGCAGGGAATGGAAGCGGCGGCTTCAGCGTTCGGTTGAACAGCTGAGAGATAGCTTCTGTAGACTCCATGCTCTTGATCTCATCTTCACAGAAGATGGGGATACGCGTCTCAACGCGCAAATGTACACATGCATGGATGAAAGTGTAGAGCCTGAATGGTTCCCATCTCCAATTCTTCAGGAACTCTTTGCAAAGCTGACAAGGATGGCAAACAATGCAACTGATATGTTTGTGGGAAGGGAAAGGTTTGCAACTATCTTATTAATGAGACTCACGGAGACTGTGATCCTCTGGCTTTCTGAGGATCAAAACTTTTGGGCGGAGATAGAAGAGGGCCCAAGGCCATTAGGCCCTCTTGGACTTCAACAGTTCTATTTGGACATGCAGTTTGTGCTGCTTTTTGCATCACAAGGCAGATACCTATCGCGGCATCTGCATCAAGTTATAAAAAACATCATTGCTCGAGCTATCGAAGCGGTTCATGCTACTGGAATAGACCCTTACAGTGTATTGCCAGAAGATGACTGGTTTGCTGAAGTAGCTCAAATTGCAATTAAAATGTTGATTGGGAAAGCCAGCTTCTCCAATGTAGAAGAAGATGGTCTCAGCCCCACTTATTCAATGTCAGGAAAATCTCCATCTATCCATTCTCATGGGAGTGAGACCAATCTTGCCCACCACTATAGAGAGCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000145 GO:0001927 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005938 GO:0006810 GO:0006887 GO:0006904 GO:0008104 GO:0008150 GO:0009987 GO:0016043 GO:0016192 GO:0022406 GO:0022607 GO:0031503 GO:0032940 GO:0032991 GO:0033036 GO:0034613 GO:0034622 GO:0034629 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044448 GO:0044464 GO:0046903 GO:0048278 GO:0051179 GO:0051234 GO:0051601 GO:0051640 GO:0051641 GO:0065003 GO:0070727 GO:0071840 GO:0071944 GO:0099023 GO:0099568 GO:0140029 GO:0140056

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Exo84_C Vps51

Protein Analysis

726

Amino Acids

80.94

Weight (kDa)

5.24

Isoelectric Point (pI)

51.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exo84_C	PF16528	97 - 305	1.6e-20	Exocyst component 84 C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0016002)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10385
fragaria_vesca	FvH4_4g35500
malus_domestica	MD13G1082700.v1.1
prunus_persica	Prupe.1G264200_v2.0.a1
pyrus_communis	pycom13g07130
rosa_chinensis	RchiOBHm_Chr4g0445151
rosa_laevigata	RLG00000005763
rosa_multiflora	Rmu_sc0000050.1_g000042
rosa_roxburghii	Rroxscaffold_5G00385670
rosa_rugosa	Rorug04G0359400
rosa_samantha	Rh4AG420200 Rh4BG432000 Rh4CG446600 Rh4DG428100
rosa_wichuraiana	Rw4G036030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	390, 1931
Acc16I	TGCGCA	1 cut(s)	573
AccB1I	GGYRCC	2 cut(s)	1168, 1265
AccB7I	CCANNNNNTGG	1 cut(s)	1049
AccI	GTMKAC	1 cut(s)	1546
AccII	CGCG	6 cut(s)	909, 1380, 1473, 1591, 1601, 1912
AclWI	GGATC	3 cut(s)	1243, 1765, 1797
AcoI	YGGCCR	1 cut(s)	330
AcsI	RAATTY	1 cut(s)	302
AcuI	CTGAAG	5 cut(s)	216, 1169, 1493, 1646, 2040
AcyI	GRCGYC	1 cut(s)	1169
AfaI	GTAC	4 cut(s)	106, 382, 1054, 1610
AfiI	CCNNNNNNNGG	6 cut(s)	339, 509, 1049, 1451, 1484, 1489
AflII	CTTAAG	1 cut(s)	979
AflIII	ACRYGT	1 cut(s)	1589
AgsI	TTSAA	8 cut(s)	216, 507, 992, 1116, 1135, 1523, 1850, 2106
AjnI	CCWGG	2 cut(s)	1261, 1483
AlwI	GGATC	3 cut(s)	1243, 1765, 1797
AlwNI	CAGNNNCTG	1 cut(s)	836
Ama87I	CYCGRG	4 cut(s)	417, 554, 1175, 1947
AoxI	GGCC	5 cut(s)	330, 947, 1819, 1826, 1834
ApaI	GGGCCC	1 cut(s)	1823
ApoI	RAATTY	1 cut(s)	302
ArsI	GACNNNNNNTTYG	2 cut(s)	1856, 1888
AseI	ATTAAT	1 cut(s)	1748
Asp700I	GAANNNNTTC	2 cut(s)	201, 1962
AspA2I	CCTAGG	1 cut(s)	1445
AspLEI	GCGC	4 cut(s)	574, 1171, 1382, 1603
AspS9I	GGNCC	5 cut(s)	739, 1196, 1819, 1820, 1835
AsuHPI	GGTGA	1 cut(s)	355
AvaI	CYCGRG	4 cut(s)	417, 554, 1175, 1947
AvaII	GGWCC	2 cut(s)	739, 1196
AvrII	CCTAGG	1 cut(s)	1445
BaeGI	GKGCMC	1 cut(s)	1823
BanI	GGYRCC	2 cut(s)	1168, 1265
BanII	GRGCYC	1 cut(s)	1823
BarI	GAAGNNNNNNTAC	2 cut(s)	1200, 1232
BccI	CCATC	9 cut(s)	455, 554, 1187, 1324, 1574, 1657, 1684, 2078, 2131
BceAI	ACGGC	1 cut(s)	1253
BcgI	CGANNNNNNTGC	2 cut(s)	776, 810
BciT130I	CCWGG	2 cut(s)	1263, 1485
BciVI	GTATCC	1 cut(s)	1579
BfaI	CTAG	7 cut(s)	206, 821, 899, 1086, 1157, 1190, 1446
BfmI	CTRYAG	2 cut(s)	1543, 2167
BfoI	RGCGCY	1 cut(s)	1172
BfrI	CTTAAG	1 cut(s)	979
BfuI	GTATCC	1 cut(s)	1579
BlnI	CCTAGG	1 cut(s)	1445
Bme1390I	CCNGG	2 cut(s)	1263, 1485
Bme18I	GGWCC	2 cut(s)	739, 1196
BmeT110I	CYCGRG	4 cut(s)	417, 554, 1175, 1947
BmgT120I	GGNCC	5 cut(s)	739, 1196, 1819, 1820, 1835
BmiI	GGNNCC	5 cut(s)	565, 1170, 1267, 1646, 1821
BmrFI	CCNGG	2 cut(s)	1263, 1485
BmsI	GCATC	6 cut(s)	833, 1358, 1419, 1898, 1924, 1930
Bpu10I	CCTNAGC	1 cut(s)	587
BpuEI	CTTGAG	2 cut(s)	149, 153
BsaBI	GATNNNNATC	1 cut(s)	1906
BsaHI	GRCGYC	1 cut(s)	1169
BsaI	GGTCTC	3 cut(s)	597, 2093, 2141
BsaJI	CCNNGG	7 cut(s)	363, 720, 786, 1269, 1445, 1483, 1823
BsaXI	ACNNNNNCTCC	4 cut(s)	192, 222, 835, 865
Bsc4I	CCNNNNNNNGG	6 cut(s)	339, 509, 1049, 1451, 1484, 1489
Bse1I	ACTGG	2 cut(s)	1978, 2015
Bse3DI	GCAATG	3 cut(s)	696, 1146, 1941
Bse8I	GATNNNNATC	1 cut(s)	1906
BseBI	CCWGG	2 cut(s)	1263, 1485
BseDI	CCNNGG	7 cut(s)	363, 720, 786, 1269, 1445, 1483, 1823
BseGI	GGATG	7 cut(s)	41, 373, 565, 1039, 1168, 1627, 1695
BseJI	GATNNNNATC	1 cut(s)	1906
BseLI	CCNNNNNNNGG	6 cut(s)	339, 509, 1049, 1451, 1484, 1489
BseMI	GCAATG	3 cut(s)	696, 1146, 1941
BseMII	CTCAG	5 cut(s)	601, 747, 1520, 1776, 2104
BseNI	ACTGG	2 cut(s)	1978, 2015
BseRI	GAGGAG	1 cut(s)	669
BseSI	GKGCMC	1 cut(s)	1823
BseYI	CCCAGC	1 cut(s)	839
Bsh1236I	CGCG	6 cut(s)	909, 1380, 1473, 1591, 1601, 1912
BshFI	GGCC	5 cut(s)	332, 949, 1821, 1828, 1836
BshNI	GGYRCC	2 cut(s)	1168, 1265
BsiHKCI	CYCGRG	4 cut(s)	417, 554, 1175, 1947
BslFI	GGGAC	1 cut(s)	147
BslI	CCNNNNNNNGG	6 cut(s)	339, 509, 1049, 1451, 1484, 1489
BsmBI	CGTCTC	1 cut(s)	1598
BsmFI	GGGAC	1 cut(s)	147
BsmI	GAATGC	1 cut(s)	425
BsnI	GGCC	5 cut(s)	332, 949, 1821, 1828, 1836
Bso31I	GGTCTC	3 cut(s)	597, 2093, 2141
BsoBI	CYCGRG	4 cut(s)	417, 554, 1175, 1947
Bsp120I	GGGCCC	1 cut(s)	1819
Bsp1286I	GDGCHC	1 cut(s)	1823
Bsp1407I	TGTACA	1 cut(s)	1608
Bsp143I	GATC	7 cut(s)	117, 475, 527, 1248, 1561, 1770, 1789
BspANI	GGCC	5 cut(s)	332, 949, 1821, 1828, 1836
BspCNI	CTCAG	5 cut(s)	600, 748, 1521, 1777, 2103
BspFNI	CGCG	6 cut(s)	909, 1380, 1473, 1591, 1601, 1912
BspHI	TCATGA	1 cut(s)	229
BspLI	GGNNCC	5 cut(s)	565, 1170, 1267, 1646, 1821
BspPI	GGATC	3 cut(s)	1243, 1765, 1797
BspQI	GCTCTTC	1 cut(s)	804
BspT107I	GGYRCC	2 cut(s)	1168, 1265
BspTI	CTTAAG	1 cut(s)	979
BspTNI	GGTCTC	3 cut(s)	597, 2093, 2141
BsrDI	GCAATG	3 cut(s)	696, 1146, 1941
BsrGI	TGTACA	1 cut(s)	1608
BsrI	ACTGG	2 cut(s)	1978, 2015
BssECI	CCNNGG	7 cut(s)	363, 720, 786, 1269, 1445, 1483, 1823
BssMI	GATC	7 cut(s)	117, 475, 527, 1248, 1561, 1770, 1789
BssNI	GRCGYC	1 cut(s)	1169
BssT1I	CCWWGG	4 cut(s)	363, 720, 1445, 1823
Bst2UI	CCWGG	2 cut(s)	1263, 1485
Bst4CI	ACNGT	6 cut(s)	385, 599, 687, 1768, 1854, 1991
Bst6I	CTCTTC	5 cut(s)	804, 1086, 1188, 1275, 1809
BstACI	GRCGYC	1 cut(s)	1169
BstAFI	CTTAAG	1 cut(s)	979
BstAPI	GCANNNNNTGC	4 cut(s)	580, 836, 1700, 1876
BstAUI	TGTACA	1 cut(s)	1608
BstC8I	GCNNGC	2 cut(s)	907, 2062
BstDEI	CTNAG	7 cut(s)	111, 587, 756, 848, 1529, 1785, 2090
BstDSI	CCRYGG	1 cut(s)	1269
BstENI	CCTNNNNNAGG	1 cut(s)	1449
BstF5I	GGATG	7 cut(s)	41, 373, 565, 1039, 1168, 1627, 1695
BstFNI	CGCG	6 cut(s)	909, 1380, 1473, 1591, 1601, 1912
BstH2I	RGCGCY	1 cut(s)	1172
BstHHI	GCGC	4 cut(s)	574, 1171, 1382, 1603
BstKTI	GATC	7 cut(s)	120, 478, 530, 1251, 1564, 1773, 1792
BstMBI	GATC	7 cut(s)	117, 475, 527, 1248, 1561, 1770, 1789
BstNI	CCWGG	2 cut(s)	1263, 1485
BstNSI	RCATGY	3 cut(s)	818, 1617, 1870
BstSCI	CCNGG	2 cut(s)	1261, 1483
BstSFI	CTRYAG	2 cut(s)	1543, 2167
BstSLI	GKGCMC	1 cut(s)	1823
BstUI	CGCG	6 cut(s)	909, 1380, 1473, 1591, 1601, 1912
BstXI	CCANNNNNNTGG	1 cut(s)	2138
BsuI	GTATCC	1 cut(s)	1579
BsuRI	GGCC	5 cut(s)	332, 949, 1821, 1828, 1836
BtgI	CCRYGG	1 cut(s)	1269
BtsCI	GGATG	7 cut(s)	41, 373, 565, 1039, 1168, 1627, 1695
BtsI	GCAGTG	1 cut(s)	1126
BtsIMutI	CAGTG	5 cut(s)	120, 595, 739, 1126, 1996
Cac8I	GCNNGC	2 cut(s)	907, 2062
CaiI	CAGNNNCTG	1 cut(s)	836
CciI	TCATGA	1 cut(s)	229
CfoI	GCGC	4 cut(s)	574, 1171, 1382, 1603
Cfr13I	GGNCC	5 cut(s)	739, 1196, 1819, 1820, 1835
CseI	GACGC	1 cut(s)	1580
CsiI	ACCWGGT	1 cut(s)	1261
Csp6I	GTAC	4 cut(s)	105, 381, 1053, 1609
CviQI	GTAC	4 cut(s)	105, 381, 1053, 1609
DdeI	CTNAG	7 cut(s)	111, 587, 756, 848, 1529, 1785, 2090
DinI	GGCGCC	1 cut(s)	1170
DpnI	GATC	7 cut(s)	119, 477, 529, 1250, 1563, 1772, 1791
DpnII	GATC	7 cut(s)	117, 475, 527, 1248, 1561, 1770, 1789
EaeI	YGGCCR	1 cut(s)	330
Eam1104I	CTCTTC	5 cut(s)	804, 1086, 1188, 1275, 1809
EarI	CTCTTC	5 cut(s)	804, 1086, 1188, 1275, 1809
EciI	GGCGGA	1 cut(s)	1820
Eco130I	CCWWGG	4 cut(s)	363, 720, 1445, 1823
Eco24I	GRGCYC	1 cut(s)	1823
Eco31I	GGTCTC	3 cut(s)	597, 2093, 2141
Eco47I	GGWCC	2 cut(s)	739, 1196
Eco57I	CTGAAG	5 cut(s)	216, 1169, 1493, 1646, 2040
Eco88I	CYCGRG	4 cut(s)	417, 554, 1175, 1947
EcoNI	CCTNNNNNAGG	1 cut(s)	1449
EcoO109I	RGGNCCY	2 cut(s)	1819, 1835
EcoRII	CCWGG	2 cut(s)	1261, 1483
EcoT14I	CCWWGG	4 cut(s)	363, 720, 1445, 1823
EcoT22I	ATGCAT	2 cut(s)	1351, 1619
EcoT38I	GRGCYC	1 cut(s)	1823
EgeI	GGCGCC	1 cut(s)	1170
EheI	GGCGCC	1 cut(s)	1170
ErhI	CCWWGG	4 cut(s)	363, 720, 1445, 1823
Esp3I	CGTCTC	1 cut(s)	1598
FalI	AAGNNNNNCTT	2 cut(s)	1108, 1140
FaqI	GGGAC	1 cut(s)	147
FauNDI	CATATG	1 cut(s)	649
FblI	GTMKAC	1 cut(s)	1546
FokI	GGATG	7 cut(s)	28, 380, 572, 1026, 1175, 1634, 1702
FriOI	GRGCYC	1 cut(s)	1823
FspAI	RTGCGCAY	1 cut(s)	573
FspBI	CTAG	7 cut(s)	206, 821, 899, 1086, 1157, 1190, 1446
FspI	TGCGCA	1 cut(s)	573
GlaI	GCGC	4 cut(s)	573, 1170, 1381, 1602
GsaI	CCCAGC	1 cut(s)	843
HaeII	RGCGCY	1 cut(s)	1172
HaeIII	GGCC	5 cut(s)	332, 949, 1821, 1828, 1836
HgaI	GACGC	1 cut(s)	1580
HhaI	GCGC	4 cut(s)	574, 1171, 1382, 1603
Hin1I	GRCGYC	1 cut(s)	1169
Hin6I	GCGC	4 cut(s)	572, 1169, 1380, 1601
HinP1I	GCGC	4 cut(s)	572, 1169, 1380, 1601
HincII	GTYRAC	1 cut(s)	400
HindII	GTYRAC	1 cut(s)	400
HindIII	AAGCTT	1 cut(s)	1391
HinfI	GANTC	7 cut(s)	212, 716, 844, 1131, 1180, 1548, 1755
HphI	GGTGA	1 cut(s)	355
Hpy166II	GTNNAC	4 cut(s)	400, 1055, 1547, 1611
Hpy188I	TCNGA	8 cut(s)	196, 259, 280, 480, 603, 757, 1459, 1786
Hpy8I	GTNNAC	4 cut(s)	400, 1055, 1547, 1611
Hpy99I	CGWCG	1 cut(s)	248
HpyAV	CCTTC	7 cut(s)	191, 333, 365, 513, 1202, 1411, 1716
HpyCH4III	ACNGT	6 cut(s)	385, 599, 687, 1768, 1854, 1991
HpyCH4IV	ACGT	2 cut(s)	1061, 1236
HpyF3I	CTNAG	7 cut(s)	111, 587, 756, 848, 1529, 1785, 2090
HpySE526I	ACGT	2 cut(s)	1061, 1236
Hsp92I	GRCGYC	1 cut(s)	1169
HspAI	GCGC	4 cut(s)	572, 1169, 1380, 1601
KasI	GGCGCC	1 cut(s)	1168
Kzo9I	GATC	7 cut(s)	117, 475, 527, 1248, 1561, 1770, 1789
LguI	GCTCTTC	1 cut(s)	804
LmnI	GCTCC	3 cut(s)	144, 656, 1377
LweI	GCATC	6 cut(s)	833, 1358, 1419, 1898, 1924, 1930
MabI	ACCWGGT	1 cut(s)	1261
MaeI	CTAG	7 cut(s)	206, 821, 899, 1086, 1157, 1190, 1446
MaeII	ACGT	2 cut(s)	1061, 1236
MaeIII	GTNAC	2 cut(s)	713, 763
MalI	GATC	7 cut(s)	119, 477, 529, 1250, 1563, 1772, 1791
MboI	GATC	7 cut(s)	117, 475, 527, 1248, 1561, 1770, 1789
MfeI	CAATTG	2 cut(s)	507, 1047
MhlI	GDGCHC	1 cut(s)	1823
MluI	ACGCGT	1 cut(s)	1589
Mly113I	GGCGCC	1 cut(s)	1169
MlyI	GAGTC	5 cut(s)	710, 853, 1174, 1542, 1749
MmeI	TCCRAC	1 cut(s)	1067
Mph1103I	ATGCAT	2 cut(s)	1351, 1619
MroXI	GAANNNNTTC	2 cut(s)	201, 1962
MseI	TTAA	7 cut(s)	66, 630, 980, 1091, 1227, 1748, 2040
MslI	CAYNNNNRTG	3 cut(s)	1616, 2136, 2142
MspA1I	CMGCKG	4 cut(s)	533, 833, 1002, 1528
MspCI	CTTAAG	1 cut(s)	979
MspR9I	CCNGG	2 cut(s)	1263, 1485
MunI	CAATTG	2 cut(s)	507, 1047
Mva1269I	GAATGC	1 cut(s)	425
MvaI	CCWGG	2 cut(s)	1263, 1485
MvnI	CGCG	6 cut(s)	909, 1380, 1473, 1591, 1601, 1912
NarI	GGCGCC	1 cut(s)	1169
NdeI	CATATG	1 cut(s)	649
NdeII	GATC	7 cut(s)	117, 475, 527, 1248, 1561, 1770, 1789
NlaIV	GGNNCC	5 cut(s)	565, 1170, 1267, 1646, 1821
NmeAIII	GCCGAG	1 cut(s)	886
NmuCI	GTSAC	2 cut(s)	713, 763
NsbI	TGCGCA	1 cut(s)	573
NsiI	ATGCAT	2 cut(s)	1351, 1619
NspI	RCATGY	3 cut(s)	818, 1617, 1870
PaeR7I	CTCGAG	2 cut(s)	1175, 1947
PagI	TCATGA	1 cut(s)	229
PciSI	GCTCTTC	1 cut(s)	804
PctI	GAATGC	1 cut(s)	425
PdmI	GAANNNNTTC	2 cut(s)	201, 1962
PfeI	GAWTC	2 cut(s)	212, 1131
PflMI	CCANNNNNTGG	1 cut(s)	1049
PleI	GAGTC	5 cut(s)	710, 852, 1174, 1542, 1749
PluTI	GGCGCC	1 cut(s)	1172
PpsI	GAGTC	5 cut(s)	710, 852, 1174, 1542, 1749
PshBI	ATTAAT	1 cut(s)	1748
PsiI	TTATAA	2 cut(s)	390, 1931
Psp6I	CCWGG	2 cut(s)	1261, 1483
PspFI	CCCAGC	1 cut(s)	839
PspGI	CCWGG	2 cut(s)	1261, 1483
PspN4I	GGNNCC	5 cut(s)	565, 1170, 1267, 1646, 1821
PspOMI	GGGCCC	1 cut(s)	1819
PspPI	GGNCC	5 cut(s)	739, 1196, 1819, 1820, 1835
PspXI	VCTCGAGB	1 cut(s)	1947
PstNI	CAGNNNCTG	1 cut(s)	836
PvuII	CAGCTG	3 cut(s)	533, 1002, 1528
RsaI	GTAC	4 cut(s)	106, 382, 1054, 1610
RsaNI	GTAC	4 cut(s)	105, 381, 1053, 1609
RseI	CAYNNNNRTG	3 cut(s)	1616, 2136, 2142
SapI	GCTCTTC	1 cut(s)	804
SaqAI	TTAA	7 cut(s)	66, 630, 980, 1091, 1227, 1748, 2040
Sau3AI	GATC	7 cut(s)	117, 475, 527, 1248, 1561, 1770, 1789
Sau96I	GGNCC	5 cut(s)	739, 1196, 1819, 1820, 1835
SchI	GAGTC	5 cut(s)	710, 853, 1174, 1542, 1749
ScrFI	CCNGG	2 cut(s)	1263, 1485
SduI	GDGCHC	1 cut(s)	1823
SexAI	ACCWGGT	1 cut(s)	1261
SfaNI	GCATC	6 cut(s)	833, 1358, 1419, 1898, 1924, 1930
SfcI	CTRYAG	2 cut(s)	1543, 2167
SfoI	GGCGCC	1 cut(s)	1170
Sfr274I	CTCGAG	2 cut(s)	1175, 1947
SinI	GGWCC	2 cut(s)	739, 1196
SlaI	CTCGAG	2 cut(s)	1175, 1947
SmiMI	CAYNNNNRTG	3 cut(s)	1616, 2136, 2142
SmlI	CTYRAG	5 cut(s)	128, 168, 979, 1175, 1947
SmoI	CTYRAG	5 cut(s)	128, 168, 979, 1175, 1947
SspDI	GGCGCC	1 cut(s)	1168
SspMI	CTAG	7 cut(s)	206, 821, 899, 1086, 1157, 1190, 1446
StyD4I	CCNGG	2 cut(s)	1261, 1483
StyI	CCWWGG	4 cut(s)	363, 720, 1445, 1823
TaaI	ACNGT	6 cut(s)	385, 599, 687, 1768, 1854, 1991
TaiI	ACGT	2 cut(s)	1064, 1239
TaqI	TCGA	6 cut(s)	526, 957, 1176, 1427, 1948, 1956
TaqII	GACCGA	1 cut(s)	800
TatI	WGTACW	2 cut(s)	104, 1608
TauI	GCSGC	5 cut(s)	836, 1473, 1504, 1507, 1915
TfiI	GAWTC	2 cut(s)	212, 1131
Tru1I	TTAA	7 cut(s)	66, 630, 980, 1091, 1227, 1748, 2040
Tru9I	TTAA	7 cut(s)	66, 630, 980, 1091, 1227, 1748, 2040
TscAI	CASTG	5 cut(s)	127, 602, 739, 1126, 1996
TseFI	GTSAC	2 cut(s)	713, 763
Tsp45I	GTSAC	2 cut(s)	713, 763
TspGWI	ACGGA	1 cut(s)	1775
TspRI	CASTG	5 cut(s)	127, 602, 739, 1126, 1996
Van91I	CCANNNNNTGG	1 cut(s)	1049
Vha464I	CTTAAG	1 cut(s)	979
VpaK11BI	GGWCC	2 cut(s)	739, 1196
VspI	ATTAAT	1 cut(s)	1748
XagI	CCTNNNNNAGG	1 cut(s)	1449
XapI	RAATTY	1 cut(s)	302
XbaI	TCTAGA	1 cut(s)	1156
XceI	RCATGY	3 cut(s)	818, 1617, 1870
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1259, 1491, 2007
XhoI	CTCGAG	2 cut(s)	1175, 1947
XmaJI	CCTAGG	1 cut(s)	1445
XmiI	GTMKAC	1 cut(s)	1546
XmnI	GAANNNNTTC	2 cut(s)	201, 1962
XspI	CTAG	7 cut(s)	206, 821, 899, 1086, 1157, 1190, 1446
Zsp2I	ATGCAT	2 cut(s)	1351, 1619

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.