FvH4_5g01170

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
713612 .. 715504
1893 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g01170.t1

Sequence Viewer

Length: 1152 bp
ATGGTGACTGCTGCATCCGTTGGTTCAAGAGTCGAGAGTTTGGCCAGCAGCGGGATCTCAACGATCCCAAAGGAGTACGTGAGACCCGAAGAGGAGCTCGTTAACATCGGTGACATCTTCGAAGACGAGAAGAGCACCGAAGGGCCTCAAGTACCTACCATTGATTTGAAGGAGATAGACTCGGAGGACATCAAGGTGAGGGAGAAATGTAGGGAGGAGTTGAAGAAAGCAGCCATCGACTGGGGTGTCATGCACCTTGTCAACCATGGCATCTCCGACGAGCTCATGGAACGGGTCAAGAAGGCCGGAAAAGCCTTCTTTGATCTTCCCATTGAGCAGAAGGAGAAGTATGCCAATGATCAGGCCTCCGGCAAAATTCAAGGCTACGGAAGCAAGCTTGCAAACAATGCTTCCGGCCAACTTGAGTGGGAGGACTACTTTTTCCACTGTGTTTATCCTGAGGACAAGCGTGACTTGTCCATTTGGCCTCAAACACCTTCCGACTATATTGTGGCAACAAGTGAGTATGCTAAGGAACTGAGGGGGTTAACAACCAAGATACTGAGCATACTCTCACTTGGCTTGGGATTAGAAGAAGGGAGGCTGGAGAAGGAGGTCGGTGGACTCGAAGAACTCCTCCTGCAAATGAAGATCAACTACTACCCAAAATGCCCTCAGCCGGAACTTGCACTCGGCGTGGAAGCTCATACAGACATAAGTGCACTCACCTTCATCCTCCACAACATGGTTCCCGGCCTGCAGCTCTTCTACGGCGGCAAATGGGTGACAGCGAAGTGCGTACCCAACTCCATCGTCATGCACATAGGCGACACCTTAGAGATTCTAAGCAACGGCAAGTACAAGAGCATTCTTCACAGGGGGCTCGTCAACAAGGAGAAGGTGAGGATCTCGTGGGCGGTTTTCTGTGAGCCGCCCAAGGAGAAGATCATCCTTAAGCCGCTACCGGAAACTGTCTCCGAGGAGGAGCCGGCGATCTTCCCACCACGGACTTTCTTCGAGCATATCCAGCACAAACTGTTCAGGCAGAGCCAGGAAGCTCTCGTCTCTACCAAAGAATCTGCTGCCCTCAAAAGCACTAAAGAATCTGCCCTCAAAAGCACTAAAGAAGCTGCTCTCATCTCAACTAATTAG

Protein Analysis

384

Amino Acids

42.86

Weight (kDa)

5.48

Isoelectric Point (pI)

46.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 51 - 164 5.6e-26 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 216 - 311 8e-32 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012370)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 245
AccB7I CCANNNNNTGG 2 cut(s) 240, 745
AciI CCGC 5 cut(s) 51, 774, 917, 932, 959
AclWI GGATC 3 cut(s) 58, 62, 914
AcoI YGGCCR 2 cut(s) 42, 415
AcsI RAATTY 1 cut(s) 375
AfaI GTAC 4 cut(s) 77, 153, 801, 860
AfiI CCNNNNNNNGG 4 cut(s) 51, 240, 679, 745
AflII CTTAAG 1 cut(s) 953
AgsI TTSAA 4 cut(s) 27, 169, 223, 380
AjnI CCWGG 1 cut(s) 1050
AluBI AGCT 7 cut(s) 97, 283, 397, 704, 763, 1058, 1130
AluI AGCT 7 cut(s) 97, 283, 397, 704, 763, 1058, 1130
Alw21I GWGCWC 4 cut(s) 99, 137, 285, 724
Alw26I GTCTC 3 cut(s) 76, 979, 1069
Alw44I GTGCAC 1 cut(s) 720
AlwI GGATC 3 cut(s) 58, 62, 914
AoxI GGCC 7 cut(s) 42, 143, 303, 363, 415, 485, 754
ApaLI GTGCAC 1 cut(s) 720
ApeKI GCWGC 6 cut(s) 11, 48, 230, 760, 1082, 1130
ApoI RAATTY 1 cut(s) 375
AspS9I GGNCC 1 cut(s) 143
AsuC2I CCSGG 1 cut(s) 753
AsuHPI GGTGA 6 cut(s) 16, 122, 208, 718, 796, 913
AsuII TTCGAA 1 cut(s) 120
AxyI CCTNAGG 1 cut(s) 459
BaeGI GKGCMC 1 cut(s) 724
BalI TGGCCA 1 cut(s) 44
BanII GRGCYC 3 cut(s) 99, 285, 885
BarI GAAGNNNNNNTAC 2 cut(s) 641, 673
BauI CACGAG 1 cut(s) 910
BbsI GAAGAC 1 cut(s) 129
Bbv12I GWGCWC 4 cut(s) 99, 137, 285, 724
BbvCI CCTCAGC 1 cut(s) 675
BbvI GCAGC 5 cut(s) 60, 242, 772, 1069, 1117
BccI CCATC 2 cut(s) 242, 818
BceAI ACGGC 2 cut(s) 787, 868
BciT130I CCWGG 1 cut(s) 1052
BclI TGATCA 1 cut(s) 358
BcnI CCSGG 1 cut(s) 753
BcoDI GTCTC 3 cut(s) 76, 979, 1069
BfmI CTRYAG 1 cut(s) 758
BfrI CTTAAG 1 cut(s) 953
BisI GCNGC 9 cut(s) 12, 49, 231, 761, 775, 932, 959, 1083, 1131
BlsI GCNGC 9 cut(s) 13, 50, 232, 762, 776, 933, 960, 1084, 1132
Bme1390I CCNGG 2 cut(s) 753, 1052
BmgT120I GGNCC 1 cut(s) 143
BmiI GGNNCC 2 cut(s) 750, 987
BmrFI CCNGG 2 cut(s) 753, 1052
BmrI ACTGGG 1 cut(s) 250
BmsI GCATC 2 cut(s) 23, 279
BmuI ACTGGG 1 cut(s) 250
BpiI GAAGAC 1 cut(s) 129
BplI GAGNNNNNCTC 2 cut(s) 164, 196
BpmI CTGGAG 1 cut(s) 626
Bpu10I CCTNAGC 2 cut(s) 531, 675
Bpu14I TTCGAA 1 cut(s) 120
BpuEI CTTGAG 2 cut(s) 132, 443
BpuMI CCSGG 1 cut(s) 753
BsaAI YACGTR 1 cut(s) 79
BsaI GGTCTC 1 cut(s) 76
BsaJI CCNNGG 4 cut(s) 265, 936, 978, 1004
BsaWI WCCGGW 1 cut(s) 964
Bsc4I CCNNNNNNNGG 4 cut(s) 51, 240, 679, 745
Bse118I RCCGGY 1 cut(s) 988
Bse1I ACTGG 1 cut(s) 245
Bse21I CCTNAGG 1 cut(s) 459
BseBI CCWGG 1 cut(s) 1052
BseDI CCNNGG 4 cut(s) 265, 936, 978, 1004
BseGI GGATG 3 cut(s) 14, 732, 948
BseLI CCNNNNNNNGG 4 cut(s) 51, 240, 679, 745
BseMII CTCAG 4 cut(s) 450, 530, 554, 689
BseNI ACTGG 1 cut(s) 245
BseRI GAGGAG 5 cut(s) 107, 230, 626, 995, 998
BseSI GKGCMC 1 cut(s) 724
BseXI GCAGC 5 cut(s) 60, 242, 772, 1069, 1117
BshFI GGCC 7 cut(s) 44, 145, 305, 365, 417, 487, 756
BsiHKAI GWGCWC 4 cut(s) 99, 137, 285, 724
BsiSI CCGG 7 cut(s) 306, 369, 414, 680, 753, 965, 989
BslI CCNNNNNNNGG 4 cut(s) 51, 240, 679, 745
BsmAI GTCTC 3 cut(s) 76, 979, 1069
BsmBI CGTCTC 1 cut(s) 1069
BsmI GAATGC 1 cut(s) 867
BsnI GGCC 7 cut(s) 44, 145, 305, 365, 417, 487, 756
Bso31I GGTCTC 1 cut(s) 76
Bsp119I TTCGAA 1 cut(s) 120
Bsp1286I GDGCHC 5 cut(s) 99, 137, 285, 724, 885
Bsp143I GATC 8 cut(s) 54, 63, 322, 358, 651, 906, 945, 993
Bsp19I CCATGG 1 cut(s) 265
BspACI CCGC 5 cut(s) 51, 774, 917, 932, 959
BspANI GGCC 7 cut(s) 44, 145, 305, 365, 417, 487, 756
BspCNI CTCAG 4 cut(s) 451, 531, 555, 688
BspLI GGNNCC 2 cut(s) 750, 987
BspMAI CTGCAG 1 cut(s) 762
BspPI GGATC 3 cut(s) 58, 62, 914
BspQI GCTCTTC 2 cut(s) 125, 770
BspT104I TTCGAA 1 cut(s) 120
BspTI CTTAAG 1 cut(s) 953
BspTNI GGTCTC 1 cut(s) 76
BsrFI RCCGGY 1 cut(s) 988
BsrI ACTGG 1 cut(s) 245
BssAI RCCGGY 1 cut(s) 988
BssECI CCNNGG 4 cut(s) 265, 936, 978, 1004
BssMI GATC 8 cut(s) 54, 63, 322, 358, 651, 906, 945, 993
BssSI CACGAG 1 cut(s) 910
BssT1I CCWWGG 2 cut(s) 265, 936
Bst2BI CACGAG 1 cut(s) 910
Bst2UI CCWGG 1 cut(s) 1052
Bst4CI ACNGT 3 cut(s) 449, 973, 1038
Bst6I CTCTTC 3 cut(s) 84, 125, 770
BstAFI CTTAAG 1 cut(s) 953
BstAPI GCANNNNNTGC 1 cut(s) 407
BstBAI YACGTR 1 cut(s) 79
BstBI TTCGAA 1 cut(s) 120
BstC8I GCNNGC 5 cut(s) 46, 395, 399, 758, 990
BstDEI CTNAG 7 cut(s) 459, 531, 539, 563, 675, 835, 845
BstDSI CCRYGG 2 cut(s) 265, 1004
BstF5I GGATG 3 cut(s) 14, 732, 948
BstKTI GATC 8 cut(s) 57, 66, 325, 361, 654, 909, 948, 996
BstMAI GTCTC 3 cut(s) 76, 979, 1069
BstMBI GATC 8 cut(s) 54, 63, 322, 358, 651, 906, 945, 993
BstMWI GCNNNNNNNGC 4 cut(s) 311, 390, 407, 1027
BstNI CCWGG 1 cut(s) 1052
BstSCI CCNGG 2 cut(s) 751, 1050
BstSFI CTRYAG 1 cut(s) 758
BstSLI GKGCMC 1 cut(s) 724
BstV1I GCAGC 5 cut(s) 60, 242, 772, 1069, 1117
BstV2I GAAGAC 1 cut(s) 129
BstX2I RGATCY 2 cut(s) 54, 906
BstYI RGATCY 2 cut(s) 54, 906
Bsu36I CCTNAGG 1 cut(s) 459
BsuRI GGCC 7 cut(s) 44, 145, 305, 365, 417, 487, 756
BtgI CCRYGG 2 cut(s) 265, 1004
BtsCI GGATG 3 cut(s) 14, 732, 948
BtsIMutI CAGTG 1 cut(s) 445
Cac8I GCNNGC 5 cut(s) 46, 395, 399, 758, 990
Cfr10I RCCGGY 1 cut(s) 988
Cfr13I GGNCC 1 cut(s) 143
Csp6I GTAC 4 cut(s) 76, 152, 800, 859
CspCI CAANNNNNGTGG 2 cut(s) 407, 442
CviAII CATG 5 cut(s) 250, 266, 286, 745, 817
CviQI GTAC 4 cut(s) 76, 152, 800, 859
DdeI CTNAG 7 cut(s) 459, 531, 539, 563, 675, 835, 845
DpnI GATC 8 cut(s) 56, 65, 324, 360, 653, 908, 947, 995
DpnII GATC 8 cut(s) 54, 63, 322, 358, 651, 906, 945, 993
DrdI GACNNNNNNGTC 1 cut(s) 245
DseDI GACNNNNNNGTC 1 cut(s) 245
EaeI YGGCCR 2 cut(s) 42, 415
Eam1104I CTCTTC 3 cut(s) 84, 125, 770
EarI CTCTTC 3 cut(s) 84, 125, 770
Ecl136II GAGCTC 2 cut(s) 97, 283
Eco130I CCWWGG 2 cut(s) 265, 936
Eco147I AGGCCT 1 cut(s) 365
Eco24I GRGCYC 3 cut(s) 99, 285, 885
Eco31I GGTCTC 1 cut(s) 76
Eco53kI GAGCTC 2 cut(s) 97, 283
Eco81I CCTNAGG 1 cut(s) 459
EcoICRI GAGCTC 2 cut(s) 97, 283
EcoO109I RGGNCCY 1 cut(s) 143
EcoRII CCWGG 1 cut(s) 1050
EcoT14I CCWWGG 2 cut(s) 265, 936
EcoT38I GRGCYC 3 cut(s) 99, 285, 885
ErhI CCWWGG 2 cut(s) 265, 936
Esp3I CGTCTC 1 cut(s) 1069
FaeI CATG 5 cut(s) 253, 269, 289, 748, 820
FalI AAGNNNNNCTT 2 cut(s) 458, 490
FatI CATG 5 cut(s) 249, 265, 285, 744, 816
FauI CCCGC 1 cut(s) 44
FbaI TGATCA 1 cut(s) 358
Fnu4HI GCNGC 9 cut(s) 12, 49, 231, 761, 775, 932, 959, 1083, 1131
FokI GGATG 2 cut(s) 719, 935
FriOI GRGCYC 3 cut(s) 99, 285, 885
Fsp4HI GCNGC 9 cut(s) 12, 49, 231, 761, 775, 932, 959, 1083, 1131
GluI GCNGC 9 cut(s) 12, 49, 231, 761, 775, 932, 959, 1083, 1131
GsuI CTGGAG 1 cut(s) 626
HaeIII GGCC 7 cut(s) 44, 145, 305, 365, 417, 487, 756
HapII CCGG 7 cut(s) 306, 369, 414, 680, 753, 965, 989
Hin1II CATG 5 cut(s) 253, 269, 289, 748, 820
HincII GTYRAC 4 cut(s) 103, 262, 549, 889
HindII GTYRAC 4 cut(s) 103, 262, 549, 889
HindIII AAGCTT 1 cut(s) 395
HinfI GANTC 6 cut(s) 30, 179, 624, 841, 1076, 1103
HpaI GTTAAC 2 cut(s) 103, 549
HpaII CCGG 7 cut(s) 306, 369, 414, 680, 753, 965, 989
HphI GGTGA 6 cut(s) 16, 122, 208, 718, 796, 913
Hpy166II GTNNAC 6 cut(s) 103, 262, 549, 623, 722, 889
Hpy188I TCNGA 4 cut(s) 184, 277, 502, 979
Hpy188III TCNNGA 4 cut(s) 27, 34, 298, 458
Hpy8I GTNNAC 6 cut(s) 103, 262, 549, 623, 722, 889
Hpy99I CGWCG 1 cut(s) 281
HpyCH4III ACNGT 3 cut(s) 449, 973, 1038
HpyCH4IV ACGT 1 cut(s) 78
HpyCH4V TGCA 8 cut(s) 14, 253, 401, 643, 689, 722, 760, 820
HpyF10VI GCNNNNNNNGC 4 cut(s) 311, 390, 407, 1027
HpyF3I CTNAG 7 cut(s) 459, 531, 539, 563, 675, 835, 845
HpySE526I ACGT 1 cut(s) 78
Hsp92II CATG 5 cut(s) 253, 269, 289, 748, 820
KroI GCCGGC 1 cut(s) 988
KroNI GCCGGC 1 cut(s) 990
Ksp22I TGATCA 1 cut(s) 358
KspAI GTTAAC 2 cut(s) 103, 549
Kzo9I GATC 8 cut(s) 54, 63, 322, 358, 651, 906, 945, 993
LguI GCTCTTC 2 cut(s) 125, 770
LmnI GCTCC 2 cut(s) 94, 985
Lsp1109I GCAGC 5 cut(s) 60, 242, 772, 1069, 1117
LweI GCATC 2 cut(s) 23, 279
MaeII ACGT 1 cut(s) 78
MaeIII GTNAC 4 cut(s) 4, 110, 470, 784
MalI GATC 8 cut(s) 56, 65, 324, 360, 653, 908, 947, 995
MboI GATC 8 cut(s) 54, 63, 322, 358, 651, 906, 945, 993
MflI RGATCY 2 cut(s) 54, 906
MhlI GDGCHC 5 cut(s) 99, 137, 285, 724, 885
MlsI TGGCCA 1 cut(s) 44
MluCI AATT 2 cut(s) 375, 1147
MluNI TGGCCA 1 cut(s) 44
MlyI GAGTC 3 cut(s) 39, 173, 618
MmeI TCCRAC 2 cut(s) 300, 525
Mox20I TGGCCA 1 cut(s) 44
MroNI GCCGGC 1 cut(s) 988
MscI TGGCCA 1 cut(s) 44
MseI TTAA 3 cut(s) 102, 548, 954
MslI CAYNNNNRTG 2 cut(s) 194, 815
Msp20I TGGCCA 1 cut(s) 44
MspA1I CMGCKG 1 cut(s) 51
MspCI CTTAAG 1 cut(s) 953
MspI CCGG 7 cut(s) 306, 369, 414, 680, 753, 965, 989
MspR9I CCNGG 2 cut(s) 753, 1052
Mva1269I GAATGC 1 cut(s) 867
MvaI CCWGG 1 cut(s) 1052
MwoI GCNNNNNNNGC 4 cut(s) 311, 390, 407, 1027
NaeI GCCGGC 1 cut(s) 990
NciI CCSGG 1 cut(s) 753
NcoI CCATGG 1 cut(s) 265
NdeII GATC 8 cut(s) 54, 63, 322, 358, 651, 906, 945, 993
NgoMIV GCCGGC 1 cut(s) 988
NlaIII CATG 5 cut(s) 253, 269, 289, 748, 820
NlaIV GGNNCC 2 cut(s) 750, 987
NmeAIII GCCGAG 1 cut(s) 672
NmuCI GTSAC 4 cut(s) 4, 110, 470, 784
NspV TTCGAA 1 cut(s) 120
PceI AGGCCT 1 cut(s) 365
PciSI GCTCTTC 2 cut(s) 125, 770
PcsI WCGNNNNNNNCGW 2 cut(s) 84, 624
PctI GAATGC 1 cut(s) 867
PdiI GCCGGC 1 cut(s) 990
PfeI GAWTC 3 cut(s) 841, 1076, 1103
PflMI CCANNNNNTGG 2 cut(s) 240, 745
PkrI GCNGC 9 cut(s) 13, 50, 232, 762, 776, 933, 960, 1084, 1132
PleI GAGTC 3 cut(s) 38, 173, 618
PpsI GAGTC 3 cut(s) 38, 173, 618
Ppu21I YACGTR 1 cut(s) 79
Psp124BI GAGCTC 2 cut(s) 99, 285
Psp6I CCWGG 1 cut(s) 1050
PspGI CCWGG 1 cut(s) 1050
PspN4I GGNNCC 2 cut(s) 750, 987
PspPI GGNCC 1 cut(s) 143
PstI CTGCAG 1 cut(s) 762
PsuI RGATCY 2 cut(s) 54, 906
RsaI GTAC 4 cut(s) 77, 153, 801, 860
RsaNI GTAC 4 cut(s) 76, 152, 800, 859
RseI CAYNNNNRTG 2 cut(s) 194, 815
SacI GAGCTC 2 cut(s) 99, 285
SapI GCTCTTC 2 cut(s) 125, 770
SaqAI TTAA 3 cut(s) 102, 548, 954
SatI GCNGC 9 cut(s) 12, 49, 231, 761, 775, 932, 959, 1083, 1131
Sau3AI GATC 8 cut(s) 54, 63, 322, 358, 651, 906, 945, 993
Sau96I GGNCC 1 cut(s) 143
SchI GAGTC 3 cut(s) 39, 173, 618
ScrFI CCNGG 2 cut(s) 753, 1052
SduI GDGCHC 5 cut(s) 99, 137, 285, 724, 885
SfaNI GCATC 2 cut(s) 23, 279
SfcI CTRYAG 1 cut(s) 758
SfuI TTCGAA 1 cut(s) 120
SmiMI CAYNNNNRTG 2 cut(s) 194, 815
SmlI CTYRAG 3 cut(s) 147, 422, 953
SmoI CTYRAG 3 cut(s) 147, 422, 953
Sse9I AATT 2 cut(s) 375, 1147
SseBI AGGCCT 1 cut(s) 365
SsiI CCGC 5 cut(s) 51, 774, 917, 932, 959
SstI GAGCTC 2 cut(s) 99, 285
StuI AGGCCT 1 cut(s) 365
StyD4I CCNGG 2 cut(s) 751, 1050
StyI CCWWGG 2 cut(s) 265, 936
TaaI ACNGT 3 cut(s) 449, 973, 1038
TaiI ACGT 1 cut(s) 81
TaqI TCGA 5 cut(s) 33, 120, 237, 627, 1017
TasI AATT 2 cut(s) 375, 1147
TatI WGTACW 1 cut(s) 858
TauI GCSGC 3 cut(s) 777, 934, 961
TfiI GAWTC 3 cut(s) 841, 1076, 1103
Tru1I TTAA 3 cut(s) 102, 548, 954
Tru9I TTAA 3 cut(s) 102, 548, 954
TscAI CASTG 1 cut(s) 452
TseFI GTSAC 4 cut(s) 4, 110, 470, 784
TseI GCWGC 6 cut(s) 11, 48, 230, 760, 1082, 1130
Tsp45I GTSAC 4 cut(s) 4, 110, 470, 784
TspDTI ATGAA 2 cut(s) 662, 721
TspGWI ACGGA 3 cut(s) 7, 402, 1021
TspRI CASTG 1 cut(s) 452
Van91I CCANNNNNTGG 2 cut(s) 240, 745
Vha464I CTTAAG 1 cut(s) 953
VneI GTGCAC 1 cut(s) 720
XapI RAATTY 1 cut(s) 375
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.