MD03G1001100.v1.1

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Forward (+)
67749 .. 70084
2336 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1001100.v1.1.491

Sequence Viewer

Length: 1233 bp
ATGCCCCTTAAACCATTGCTTCATCAACCCACCACAAAAAAAGAGTGCAGGGCCTGCATTGTTATCGTAAAAAAAAAAAAAATAAATAAAAAAATAAATAAATCTAGTAATATACTAGCTGAGATAGTATATTCTTGTTGTCGAAAGCCAGCTCCAAAAATGGTGAGTTCTGATTCAGTGAATTCAAGGGTTGAGACCTTGGCCGGCAGTGGAATCTCAACCATCCCAAAAGAGTACATCAGACCTAAAGATGAGCTTGTAAACATTGGTGACATCTTCGAACAAGAGAAGAACAACGAAGGGCCTCAAGTTCCCACCATCGATTTGAAGGAGATAGAGTCTGATAACGAAAAAGTGAGAGCAAAATGCAGGGAGGAGTTGAAGAAGGCAGCTGTGGACTGGGGTGTTATGCACCTTGTGAACCATGGCATCTCTGACGAGCTCATGGACAAGGTCAGGAAGGCCGGTAAGGCCTTCTTTGACCTTCCCATTGAGCAGAAGGAGAAGTATGCCAATGACCAGGCCTCTGGTAAGATTCAAGGCTATGGAAGCAAGCTTGCAAACAATGCATCTGGGCAGCTTGAGTGGGAGGACTACTTCTTCCACTGTGTATACCCAGAGGACAAGCGTGACTTGTCTATTTGGCCTCAAACACCTGCTGATTACATTGAGGCAACCGCCGAGTATGCTAAGCAACTGAGGGAGCTAGCAACCAAGGTACTGAAAGTTCTGTCACTTGGCTTGGGATTGGATGAAGGGAGGCTGGAGAAAGAAGTTGGTGGACTTGAAGAGCTCCTCTTGCAAATGAAAATCAACTACTACCCAAAATGCCCTCAGCCGGAGCTTGCACTTGGTGTTGAAGCTCATACTGACGTCAGTGCACTCACCTTCATCCTCCACAACATGGTTCCTGGCCTGCAGCTTTTCTATGAAGGAAAGTGGGTCACTGCCAAGTGCGTTCCAAATTCCATCGTCATGCACATTGGGGACACACTCGAGATTTTGAGCAATGGGAAGTACAAAAGTATACTCCACAGGGGCATGGTGAACAAGGAAAAGGTGAGGATTTCATGGGCAGTTTTCTGTGAGCCACCAAAGGAGAAGATCATCCTTAAGCCACTGCCGGAGACCGTGTCCGAGGAGGAGCCGGCAATGTTCCCACCACGAACTTTTGCTGAGCATATTCAGCACAAGTTGTTCAGGAAGAGTCAAGAGGCTTTGCTCCCCAAGTGA

Protein Analysis

411

Amino Acids

46.36

Weight (kDa)

8.2

Isoelectric Point (pI)

47.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 104 - 217 2.3e-26 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 269 - 364 3.2e-32 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012370)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 664
AatII GACGTC 1 cut(s) 876
Acc36I ACCTGC 1 cut(s) 664
AccB7I CCANNNNNTGG 1 cut(s) 904
AccI GTMKAC 2 cut(s) 612, 1027
AciI CCGC 1 cut(s) 678
AcoI YGGCCR 1 cut(s) 201
AcsI RAATTY 2 cut(s) 181, 964
AcyI GRCGYC 1 cut(s) 873
AdeI CACNNNGTG 2 cut(s) 418, 854
AfaI GTAC 3 cut(s) 236, 720, 1019
AfiI CCNNNNNNNGG 2 cut(s) 838, 904
AflII CTTAAG 1 cut(s) 1112
AgsI TTSAA 6 cut(s) 186, 328, 382, 539, 788, 860
AjnI CCWGG 2 cut(s) 519, 910
Alw21I GWGCWC 3 cut(s) 444, 795, 883
Alw26I GTCTC 2 cut(s) 188, 1121
Alw44I GTGCAC 1 cut(s) 879
AlwNI CAGNNNCTG 1 cut(s) 54
Ama87I CYCGRG 1 cut(s) 995
AoxI GGCC 8 cut(s) 51, 201, 302, 462, 471, 522, 644, 913
ApaLI GTGCAC 1 cut(s) 879
ApeKI GCWGC 3 cut(s) 389, 577, 919
ApoI RAATTY 2 cut(s) 181, 964
AspS9I GGNCC 2 cut(s) 51, 302
AsuHPI GGTGA 5 cut(s) 175, 281, 877, 1057, 1072
AsuII TTCGAA 1 cut(s) 279
AsuNHI GCTAGC 1 cut(s) 706
AvaI CYCGRG 1 cut(s) 995
BaeGI GKGCMC 1 cut(s) 883
BanII GRGCYC 2 cut(s) 444, 795
Bbv12I GWGCWC 3 cut(s) 444, 795, 883
BbvCI CCTCAGC 1 cut(s) 834
BbvI GCAGC 3 cut(s) 401, 589, 931
BccI CCATC 3 cut(s) 230, 326, 977
BcgI CGANNNNNNTGC 2 cut(s) 46, 80
BciT130I CCWGG 2 cut(s) 521, 912
BcoDI GTCTC 2 cut(s) 188, 1121
BfaI CTAG 3 cut(s) 105, 116, 707
BfmI CTRYAG 1 cut(s) 917
BfrI CTTAAG 1 cut(s) 1112
BfuAI ACCTGC 1 cut(s) 664
BglI GCCNNNNNGGC 1 cut(s) 470
BisI GCNGC 3 cut(s) 390, 578, 920
BlpI GCTNAGC 2 cut(s) 690, 1176
BlsI GCNGC 3 cut(s) 391, 579, 921
Bme1390I CCNGG 2 cut(s) 521, 912
BmeT110I CYCGRG 1 cut(s) 995
BmgT120I GGNCC 2 cut(s) 51, 302
BmiI GGNNCC 2 cut(s) 909, 1146
BmrFI CCNGG 2 cut(s) 521, 912
BmrI ACTGGG 1 cut(s) 409
BmsI GCATC 2 cut(s) 438, 578
BmtI GCTAGC 1 cut(s) 710
BmuI ACTGGG 1 cut(s) 409
BpmI CTGGAG 1 cut(s) 785
Bpu10I CCTNAGC 1 cut(s) 834
Bpu1102I GCTNAGC 2 cut(s) 690, 1176
Bpu14I TTCGAA 1 cut(s) 279
BpuEI CTTGAG 2 cut(s) 291, 602
Bsa29I ATCGAT 1 cut(s) 321
BsaHI GRCGYC 1 cut(s) 873
BsaI GGTCTC 2 cut(s) 188, 1121
BsaJI CCNNGG 4 cut(s) 198, 424, 714, 1137
BsaXI ACNNNNNCTCC 4 cut(s) 323, 353, 1118, 1148
Bsc4I CCNNNNNNNGG 2 cut(s) 838, 904
Bse118I RCCGGY 3 cut(s) 203, 464, 1147
Bse1I ACTGG 1 cut(s) 404
Bse3DI GCAATG 3 cut(s) 14, 1015, 1158
BseBI CCWGG 2 cut(s) 521, 912
BseCI ATCGAT 1 cut(s) 321
BseDI CCNNGG 4 cut(s) 198, 424, 714, 1137
BseGI GGATG 4 cut(s) 222, 757, 891, 1107
BseLI CCNNNNNNNGG 2 cut(s) 838, 904
BseMI GCAATG 3 cut(s) 14, 1015, 1158
BseMII CTCAG 4 cut(s) 111, 689, 848, 1167
BseNI ACTGG 1 cut(s) 404
BseRI GAGGAG 4 cut(s) 389, 785, 1154, 1157
BseSI GKGCMC 1 cut(s) 883
BseXI GCAGC 3 cut(s) 401, 589, 931
BsgI GTGCAG 1 cut(s) 67
BshFI GGCC 8 cut(s) 53, 203, 304, 464, 473, 524, 646, 915
BshVI ATCGAT 1 cut(s) 321
BsiHKAI GWGCWC 3 cut(s) 444, 795, 883
BsiHKCI CYCGRG 1 cut(s) 995
BsiSI CCGG 5 cut(s) 204, 465, 839, 1124, 1148
BslFI GGGAC 1 cut(s) 1001
BslI CCNNNNNNNGG 2 cut(s) 838, 904
BsmAI GTCTC 2 cut(s) 188, 1121
BsmFI GGGAC 1 cut(s) 1001
BsnI GGCC 8 cut(s) 53, 203, 304, 464, 473, 524, 646, 915
Bso31I GGTCTC 2 cut(s) 188, 1121
BsoBI CYCGRG 1 cut(s) 995
Bsp119I TTCGAA 1 cut(s) 279
Bsp1286I GDGCHC 3 cut(s) 444, 795, 883
Bsp143I GATC 1 cut(s) 1104
Bsp1720I GCTNAGC 2 cut(s) 690, 1176
Bsp19I CCATGG 1 cut(s) 424
BspACI CCGC 1 cut(s) 678
BspANI GGCC 8 cut(s) 53, 203, 304, 464, 473, 524, 646, 915
BspCNI CTCAG 4 cut(s) 112, 690, 847, 1168
BspDI ATCGAT 1 cut(s) 321
BspLI GGNNCC 2 cut(s) 909, 1146
BspMAI CTGCAG 1 cut(s) 921
BspMI ACCTGC 1 cut(s) 664
BspOI GCTAGC 1 cut(s) 710
BspQI GCTCTTC 1 cut(s) 783
BspT104I TTCGAA 1 cut(s) 279
BspTI CTTAAG 1 cut(s) 1112
BspTNI GGTCTC 2 cut(s) 188, 1121
BsrDI GCAATG 3 cut(s) 14, 1015, 1158
BsrFI RCCGGY 3 cut(s) 203, 464, 1147
BsrI ACTGG 1 cut(s) 404
BssAI RCCGGY 3 cut(s) 203, 464, 1147
BssECI CCNNGG 4 cut(s) 198, 424, 714, 1137
BssMI GATC 1 cut(s) 1104
BssNAI GTATAC 2 cut(s) 613, 1028
BssNI GRCGYC 1 cut(s) 873
BssT1I CCWWGG 3 cut(s) 198, 424, 714
Bst1107I GTATAC 2 cut(s) 613, 1028
Bst2UI CCWGG 2 cut(s) 521, 912
Bst4CI ACNGT 2 cut(s) 608, 1132
Bst6I CTCTTC 2 cut(s) 783, 1199
BstACI GRCGYC 1 cut(s) 873
BstAFI CTTAAG 1 cut(s) 1112
BstAPI GCANNNNNTGC 2 cut(s) 54, 566
BstBI TTCGAA 1 cut(s) 279
BstC8I GCNNGC 9 cut(s) 55, 150, 205, 554, 558, 708, 846, 917, 1149
BstDEI CTNAG 5 cut(s) 120, 690, 698, 834, 1176
BstDSI CCRYGG 1 cut(s) 424
BstF5I GGATG 4 cut(s) 222, 757, 891, 1107
BstKTI GATC 1 cut(s) 1107
BstMAI GTCTC 2 cut(s) 188, 1121
BstMBI GATC 1 cut(s) 1104
BstMWI GCNNNNNNNGC 7 cut(s) 54, 470, 549, 566, 686, 799, 1186
BstNI CCWGG 2 cut(s) 521, 912
BstSCI CCNGG 2 cut(s) 519, 910
BstSFI CTRYAG 1 cut(s) 917
BstSLI GKGCMC 1 cut(s) 883
BstV1I GCAGC 3 cut(s) 401, 589, 931
BstXI CCANNNNNNTGG 1 cut(s) 527
BstZ17I GTATAC 2 cut(s) 613, 1028
Bsu15I ATCGAT 1 cut(s) 321
BsuRI GGCC 8 cut(s) 53, 203, 304, 464, 473, 524, 646, 915
BsuTUI ATCGAT 1 cut(s) 321
BtgI CCRYGG 1 cut(s) 424
BtsCI GGATG 4 cut(s) 222, 757, 891, 1107
BtsI GCAGTG 3 cut(s) 214, 945, 1118
BtsIMutI CAGTG 6 cut(s) 183, 214, 604, 883, 945, 1118
BveI ACCTGC 1 cut(s) 664
Cac8I GCNNGC 9 cut(s) 55, 150, 205, 554, 558, 708, 846, 917, 1149
CaiI CAGNNNCTG 1 cut(s) 54
Cfr10I RCCGGY 3 cut(s) 203, 464, 1147
Cfr13I GGNCC 2 cut(s) 51, 302
ClaI ATCGAT 1 cut(s) 321
Csp6I GTAC 3 cut(s) 235, 719, 1018
CviAII CATG 6 cut(s) 425, 445, 904, 976, 1042, 1071
CviQI GTAC 3 cut(s) 235, 719, 1018
DdeI CTNAG 5 cut(s) 120, 690, 698, 834, 1176
DpnI GATC 1 cut(s) 1106
DpnII GATC 1 cut(s) 1104
DraIII CACNNNGTG 2 cut(s) 418, 854
EaeI YGGCCR 1 cut(s) 201
Eam1104I CTCTTC 2 cut(s) 783, 1199
EarI CTCTTC 2 cut(s) 783, 1199
Ecl136II GAGCTC 2 cut(s) 442, 793
Eco130I CCWWGG 3 cut(s) 198, 424, 714
Eco147I AGGCCT 2 cut(s) 473, 524
Eco24I GRGCYC 2 cut(s) 444, 795
Eco31I GGTCTC 2 cut(s) 188, 1121
Eco53kI GAGCTC 2 cut(s) 442, 793
Eco88I CYCGRG 1 cut(s) 995
EcoICRI GAGCTC 2 cut(s) 442, 793
EcoO109I RGGNCCY 2 cut(s) 51, 302
EcoRI GAATTC 1 cut(s) 181
EcoRII CCWGG 2 cut(s) 519, 910
EcoT14I CCWWGG 3 cut(s) 198, 424, 714
EcoT22I ATGCAT 1 cut(s) 571
EcoT38I GRGCYC 2 cut(s) 444, 795
ErhI CCWWGG 3 cut(s) 198, 424, 714
FaeI CATG 6 cut(s) 428, 448, 907, 979, 1045, 1074
FalI AAGNNNNNCTT 6 cut(s) 240, 272, 461, 493, 617, 649
FaqI GGGAC 1 cut(s) 1001
FatI CATG 6 cut(s) 424, 444, 903, 975, 1041, 1070
FblI GTMKAC 2 cut(s) 612, 1027
Fnu4HI GCNGC 3 cut(s) 390, 578, 920
FokI GGATG 4 cut(s) 209, 764, 878, 1094
FriOI GRGCYC 2 cut(s) 444, 795
Fsp4HI GCNGC 3 cut(s) 390, 578, 920
FspBI CTAG 3 cut(s) 105, 116, 707
GluI GCNGC 3 cut(s) 390, 578, 920
GsuI CTGGAG 1 cut(s) 785
HaeIII GGCC 8 cut(s) 53, 203, 304, 464, 473, 524, 646, 915
HapII CCGG 5 cut(s) 204, 465, 839, 1124, 1148
Hin1I GRCGYC 1 cut(s) 873
Hin1II CATG 6 cut(s) 428, 448, 907, 979, 1045, 1074
HindIII AAGCTT 1 cut(s) 554
HinfI GANTC 5 cut(s) 173, 213, 338, 535, 1207
HpaII CCGG 5 cut(s) 204, 465, 839, 1124, 1148
HphI GGTGA 5 cut(s) 175, 281, 877, 1057, 1072
Hpy166II GTNNAC 8 cut(s) 262, 397, 421, 613, 782, 881, 1028, 1048
Hpy188I TCNGA 5 cut(s) 172, 242, 343, 436, 1138
Hpy188III TCNNGA 4 cut(s) 457, 997, 1201, 1211
Hpy8I GTNNAC 8 cut(s) 262, 397, 421, 613, 782, 881, 1028, 1048
HpyCH4III ACNGT 2 cut(s) 608, 1132
HpyCH4IV ACGT 1 cut(s) 873
HpyF10VI GCNNNNNNNGC 7 cut(s) 54, 470, 549, 566, 686, 799, 1186
HpyF3I CTNAG 5 cut(s) 120, 690, 698, 834, 1176
HpySE526I ACGT 1 cut(s) 873
Hsp92I GRCGYC 1 cut(s) 873
Hsp92II CATG 6 cut(s) 428, 448, 907, 979, 1045, 1074
KroI GCCGGC 2 cut(s) 203, 1147
KroNI GCCGGC 2 cut(s) 205, 1149
Kzo9I GATC 1 cut(s) 1104
LguI GCTCTTC 1 cut(s) 783
LmnI GCTCC 6 cut(s) 157, 703, 798, 841, 1144, 1227
Lsp1109I GCAGC 3 cut(s) 401, 589, 931
LweI GCATC 2 cut(s) 438, 578
MaeI CTAG 3 cut(s) 105, 116, 707
MaeII ACGT 1 cut(s) 873
MaeIII GTNAC 4 cut(s) 269, 629, 732, 943
MalI GATC 1 cut(s) 1106
MboI GATC 1 cut(s) 1104
MboII GAAGA 7 cut(s) 268, 301, 394, 592, 800, 1114, 1216
MhlI GDGCHC 3 cut(s) 444, 795, 883
MluCI AATT 2 cut(s) 181, 964
MlyI GAGTC 2 cut(s) 347, 1216
Mph1103I ATGCAT 1 cut(s) 571
MroNI GCCGGC 2 cut(s) 203, 1147
MseI TTAA 2 cut(s) 9, 1113
MslI CAYNNNNRTG 1 cut(s) 974
MspA1I CMGCKG 1 cut(s) 392
MspCI CTTAAG 1 cut(s) 1112
MspI CCGG 5 cut(s) 204, 465, 839, 1124, 1148
MspR9I CCNGG 2 cut(s) 521, 912
MvaI CCWGG 2 cut(s) 521, 912
MwoI GCNNNNNNNGC 7 cut(s) 54, 470, 549, 566, 686, 799, 1186
NaeI GCCGGC 2 cut(s) 205, 1149
NcoI CCATGG 1 cut(s) 424
NdeII GATC 1 cut(s) 1104
NgoMIV GCCGGC 2 cut(s) 203, 1147
NheI GCTAGC 1 cut(s) 706
NlaIII CATG 6 cut(s) 428, 448, 907, 979, 1045, 1074
NlaIV GGNNCC 2 cut(s) 909, 1146
NmeAIII GCCGAG 1 cut(s) 706
NmuCI GTSAC 4 cut(s) 269, 629, 732, 943
NsiI ATGCAT 1 cut(s) 571
NspV TTCGAA 1 cut(s) 279
PaeR7I CTCGAG 1 cut(s) 995
PaqCI CACCTGC 1 cut(s) 664
PceI AGGCCT 2 cut(s) 473, 524
PciSI GCTCTTC 1 cut(s) 783
PdiI GCCGGC 2 cut(s) 205, 1149
PfeI GAWTC 3 cut(s) 173, 213, 535
PflFI GACNNNGTC 2 cut(s) 452, 1132
PflMI CCANNNNNTGG 1 cut(s) 904
PkrI GCNGC 3 cut(s) 391, 579, 921
PleI GAGTC 2 cut(s) 346, 1215
PpsI GAGTC 2 cut(s) 346, 1215
Psp124BI GAGCTC 2 cut(s) 444, 795
Psp6I CCWGG 2 cut(s) 519, 910
PspGI CCWGG 2 cut(s) 519, 910
PspN4I GGNNCC 2 cut(s) 909, 1146
PspPI GGNCC 2 cut(s) 51, 302
PsrI GAACNNNNNNTAC 2 cut(s) 711, 743
PstI CTGCAG 1 cut(s) 921
PstNI CAGNNNCTG 1 cut(s) 54
PsyI GACNNNGTC 2 cut(s) 452, 1132
PvuII CAGCTG 1 cut(s) 392
RsaI GTAC 3 cut(s) 236, 720, 1019
RsaNI GTAC 3 cut(s) 235, 719, 1018
RseI CAYNNNNRTG 1 cut(s) 974
SacI GAGCTC 2 cut(s) 444, 795
SapI GCTCTTC 1 cut(s) 783
SaqAI TTAA 2 cut(s) 9, 1113
SatI GCNGC 3 cut(s) 390, 578, 920
Sau3AI GATC 1 cut(s) 1104
Sau96I GGNCC 2 cut(s) 51, 302
SchI GAGTC 2 cut(s) 347, 1216
ScrFI CCNGG 2 cut(s) 521, 912
SduI GDGCHC 3 cut(s) 444, 795, 883
SfaNI GCATC 2 cut(s) 438, 578
SfcI CTRYAG 1 cut(s) 917
SfiI GGCCNNNNNGGCC 1 cut(s) 470
Sfr274I CTCGAG 1 cut(s) 995
SfuI TTCGAA 1 cut(s) 279
SlaI CTCGAG 1 cut(s) 995
SmiMI CAYNNNNRTG 1 cut(s) 974
SmlI CTYRAG 4 cut(s) 306, 581, 995, 1112
SmoI CTYRAG 4 cut(s) 306, 581, 995, 1112
Sse9I AATT 2 cut(s) 181, 964
SseBI AGGCCT 2 cut(s) 473, 524
SsiI CCGC 1 cut(s) 678
SspMI CTAG 3 cut(s) 105, 116, 707
SstI GAGCTC 2 cut(s) 444, 795
StuI AGGCCT 2 cut(s) 473, 524
StyD4I CCNGG 2 cut(s) 519, 910
StyI CCWWGG 3 cut(s) 198, 424, 714
TaaI ACNGT 2 cut(s) 608, 1132
TaiI ACGT 1 cut(s) 876
TaqI TCGA 4 cut(s) 142, 279, 321, 996
TasI AATT 2 cut(s) 181, 964
TatI WGTACW 2 cut(s) 234, 1017
TfiI GAWTC 3 cut(s) 173, 213, 535
Tru1I TTAA 2 cut(s) 9, 1113
Tru9I TTAA 2 cut(s) 9, 1113
TscAI CASTG 6 cut(s) 183, 214, 611, 883, 952, 1125
TseFI GTSAC 4 cut(s) 269, 629, 732, 943
TseI GCWGC 3 cut(s) 389, 577, 919
Tsp45I GTSAC 4 cut(s) 269, 629, 732, 943
TspDTI ATGAA 6 cut(s) 11, 768, 821, 880, 945, 1059
TspRI CASTG 6 cut(s) 183, 214, 611, 883, 952, 1125
Tth111I GACNNNGTC 2 cut(s) 452, 1132
Van91I CCANNNNNTGG 1 cut(s) 904
Vha464I CTTAAG 1 cut(s) 1112
VneI GTGCAC 1 cut(s) 879
XapI RAATTY 2 cut(s) 181, 964
XhoI CTCGAG 1 cut(s) 995
XmiI GTMKAC 2 cut(s) 612, 1027
XspI CTAG 3 cut(s) 105, 116, 707
ZraI GACGTC 1 cut(s) 874
Zsp2I ATGCAT 1 cut(s) 571
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.