Rmu_sc0002748.1_g000005

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002748.1
Physical Location & Seq
Reverse (-)
14406 .. 15831
1426 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002748.1_g000005.1.cds

Sequence Viewer

Length: 1134 bp
atggtgactgctgcatccattggttcaagagttgagagtttgtccagcagcgggatctcgacgatcccaaaggagtacgtgagacccgaagaggagctcattaacatcggtgacatcttcgaggatgagaagagcaccgaagggcctcaagtacctaccattgatttgaaggaaatagactccgaggacatcaaggtgagggagacatgtagggaggagttgaagaaagcagccatcgattggggtgtcatgcaccttgtcaaccatggcatctccgacgagctcatggaacgggtcaagaaggccggacaagccttctttgatcttcccattgagcacaaggagaagtatgccaatgaccaggcctcgggcaaaattcaaggctacggaagcaagcttgcaaacaatgcttccgggcaacttgagtgggaggactattttttccactgtgtatatcctgaggacaagcgcgacttgtccgtttggcctcaaacaccttccgattatattgtggcaacaagcgagtacgccaaggaactgagggggctagcaaccaagatactgaccgtactctcacttggcttgggattagaagaagggaggctggagaaggaggtcggtggactcgaagaactcgtcctgcaaatgaaaatcaattactacccaaaatgccctcagccggaacttgccctcggcgtggaagcccacaccgacataagtgcactcaccttcatcctccacaacatggttcccggcctgcagctcttctacggcggcaaatgggtgacagcgaaatgcgtgcccaactccatcgtcatgcacatcggcgacaccttggagattctgagcaacggcaagtacaagagcattcttcacagggggctcgtcaacaaggagaaggtgaggatctcgtgggcggttttctgtgagccacccaaggagaagatcatcctcaagccgctgccggagactgtctccgaggaggaaccggcgatcttcccaccgcggactttctccgagcatatccagcacaagttgttcaggcagagccaggaagctctcgcctctaccaaagaagctgccatctctactagtaatggagctgctcatatctccactaaagaagctgcttaa

Protein Analysis

377

Amino Acids

41.99

Weight (kDa)

5.31

Isoelectric Point (pI)

48.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012370)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 240, 745
AccII CGCG 2 cut(s) 471, 1006
AciI CCGC 6 cut(s) 51, 774, 917, 959, 1004, 1006
AclWI GGATC 3 cut(s) 58, 62, 914
AcsI RAATTY 1 cut(s) 375
AfaI GTAC 5 cut(s) 77, 153, 527, 570, 860
AfiI CCNNNNNNNGG 6 cut(s) 51, 240, 367, 679, 697, 745
AflIII ACRYGT 1 cut(s) 206
AgsI TTSAA 4 cut(s) 27, 169, 223, 380
AhlI ACTAGT 1 cut(s) 1091
AjnI CCWGG 2 cut(s) 360, 1050
AluBI AGCT 8 cut(s) 97, 283, 397, 763, 1058, 1079, 1103, 1127
AluI AGCT 8 cut(s) 97, 283, 397, 763, 1058, 1079, 1103, 1127
Alw21I GWGCWC 5 cut(s) 99, 137, 285, 339, 724
Alw26I GTCTC 4 cut(s) 76, 197, 962, 979
Alw44I GTGCAC 1 cut(s) 720
AlwI GGATC 3 cut(s) 58, 62, 914
Ama87I CYCGRG 1 cut(s) 367
AoxI GGCC 5 cut(s) 143, 303, 363, 485, 754
ApaLI GTGCAC 1 cut(s) 720
ApeKI GCWGC 8 cut(s) 11, 48, 230, 760, 961, 1079, 1103, 1127
ApoI RAATTY 1 cut(s) 375
ArsI GACNNNNNNTTYG 2 cut(s) 621, 653
AspLEI GCGC 1 cut(s) 471
AspS9I GGNCC 1 cut(s) 143
AsuC2I CCSGG 2 cut(s) 415, 753
AsuHPI GGTGA 6 cut(s) 16, 122, 208, 718, 796, 913
AsuNHI GCTAGC 1 cut(s) 547
AvaI CYCGRG 1 cut(s) 367
AxyI CCTNAGG 1 cut(s) 459
BaeGI GKGCMC 2 cut(s) 724, 804
BanII GRGCYC 3 cut(s) 99, 285, 885
BauI CACGAG 1 cut(s) 910
Bbv12I GWGCWC 5 cut(s) 99, 137, 285, 339, 724
BbvCI CCTCAGC 1 cut(s) 675
BbvI GCAGC 7 cut(s) 60, 242, 772, 948, 1066, 1090, 1114
BccI CCATC 3 cut(s) 242, 818, 1091
BceAI ACGGC 2 cut(s) 787, 868
BcgI CGANNNNNNTGC 4 cut(s) 701, 735, 781, 815
BciT130I CCWGG 2 cut(s) 362, 1052
BcnI CCSGG 2 cut(s) 415, 753
BcoDI GTCTC 4 cut(s) 76, 197, 962, 979
BcuI ACTAGT 1 cut(s) 1091
BfaI CTAG 2 cut(s) 548, 1092
BfmI CTRYAG 1 cut(s) 758
Bme1390I CCNGG 4 cut(s) 362, 415, 753, 1052
BmeT110I CYCGRG 1 cut(s) 367
BmgT120I GGNCC 1 cut(s) 143
BmiI GGNNCC 2 cut(s) 750, 987
BmrFI CCNGG 4 cut(s) 362, 415, 753, 1052
BmsI GCATC 2 cut(s) 23, 279
BmtI GCTAGC 1 cut(s) 551
BplI GAGNNNNNCTC 2 cut(s) 959, 991
BpmI CTGGAG 1 cut(s) 626
Bpu10I CCTNAGC 1 cut(s) 675
BpuEI CTTGAG 3 cut(s) 132, 443, 938
BpuMI CCSGG 2 cut(s) 415, 753
Bsa29I ATCGAT 1 cut(s) 237
BsaAI YACGTR 1 cut(s) 79
BsaI GGTCTC 1 cut(s) 76
BsaJI CCNNGG 9 cut(s) 183, 265, 366, 531, 691, 834, 936, 978, 1004
Bsc4I CCNNNNNNNGG 6 cut(s) 51, 240, 367, 679, 697, 745
Bse118I RCCGGY 1 cut(s) 988
Bse21I CCTNAGG 1 cut(s) 459
BseBI CCWGG 2 cut(s) 362, 1052
BseCI ATCGAT 1 cut(s) 237
BseDI CCNNGG 9 cut(s) 183, 265, 366, 531, 691, 834, 936, 978, 1004
BseGI GGATG 4 cut(s) 14, 130, 732, 948
BseLI CCNNNNNNNGG 6 cut(s) 51, 240, 367, 679, 697, 745
BseMII CTCAG 4 cut(s) 450, 530, 689, 836
BseRI GAGGAG 3 cut(s) 107, 230, 995
BseSI GKGCMC 2 cut(s) 724, 804
BseXI GCAGC 7 cut(s) 60, 242, 772, 948, 1066, 1090, 1114
Bsh1236I CGCG 2 cut(s) 471, 1006
BshFI GGCC 5 cut(s) 145, 305, 365, 487, 756
BshVI ATCGAT 1 cut(s) 237
BsiHKAI GWGCWC 5 cut(s) 99, 137, 285, 339, 724
BsiHKCI CYCGRG 1 cut(s) 367
BsiSI CCGG 6 cut(s) 306, 414, 680, 753, 965, 989
BslI CCNNNNNNNGG 6 cut(s) 51, 240, 367, 679, 697, 745
BsmAI GTCTC 4 cut(s) 76, 197, 962, 979
BsmI GAATGC 1 cut(s) 867
BsnI GGCC 5 cut(s) 145, 305, 365, 487, 756
Bso31I GGTCTC 1 cut(s) 76
BsoBI CYCGRG 1 cut(s) 367
Bsp1286I GDGCHC 7 cut(s) 99, 137, 285, 339, 724, 804, 885
Bsp143I GATC 6 cut(s) 54, 63, 322, 906, 945, 993
Bsp19I CCATGG 1 cut(s) 265
BspACI CCGC 6 cut(s) 51, 774, 917, 959, 1004, 1006
BspANI GGCC 5 cut(s) 145, 305, 365, 487, 756
BspCNI CTCAG 4 cut(s) 451, 531, 688, 837
BspDI ATCGAT 1 cut(s) 237
BspFNI CGCG 2 cut(s) 471, 1006
BspLI GGNNCC 2 cut(s) 750, 987
BspMAI CTGCAG 1 cut(s) 762
BspOI GCTAGC 1 cut(s) 551
BspPI GGATC 3 cut(s) 58, 62, 914
BspQI GCTCTTC 2 cut(s) 125, 770
BspTNI GGTCTC 1 cut(s) 76
BsrFI RCCGGY 1 cut(s) 988
BssAI RCCGGY 1 cut(s) 988
BssECI CCNNGG 9 cut(s) 183, 265, 366, 531, 691, 834, 936, 978, 1004
BssMI GATC 6 cut(s) 54, 63, 322, 906, 945, 993
BssSI CACGAG 1 cut(s) 910
BssT1I CCWWGG 4 cut(s) 265, 531, 834, 936
Bst2BI CACGAG 1 cut(s) 910
Bst2UI CCWGG 2 cut(s) 362, 1052
Bst4CI ACNGT 3 cut(s) 449, 568, 973
Bst6I CTCTTC 3 cut(s) 84, 125, 770
BstAPI GCANNNNNTGC 1 cut(s) 407
BstBAI YACGTR 1 cut(s) 79
BstC8I GCNNGC 5 cut(s) 395, 399, 549, 758, 800
BstDEI CTNAG 4 cut(s) 459, 539, 675, 845
BstDSI CCRYGG 2 cut(s) 265, 1004
BstF5I GGATG 4 cut(s) 14, 130, 732, 948
BstFNI CGCG 2 cut(s) 471, 1006
BstHHI GCGC 1 cut(s) 471
BstKTI GATC 6 cut(s) 57, 66, 325, 909, 948, 996
BstMAI GTCTC 4 cut(s) 76, 197, 962, 979
BstMBI GATC 6 cut(s) 54, 63, 322, 906, 945, 993
BstMWI GCNNNNNNNGC 4 cut(s) 311, 390, 407, 1027
BstNI CCWGG 2 cut(s) 362, 1052
BstNSI RCATGY 1 cut(s) 210
BstSCI CCNGG 4 cut(s) 360, 413, 751, 1050
BstSFI CTRYAG 1 cut(s) 758
BstSLI GKGCMC 2 cut(s) 724, 804
BstUI CGCG 2 cut(s) 471, 1006
BstV1I GCAGC 7 cut(s) 60, 242, 772, 948, 1066, 1090, 1114
BstX2I RGATCY 2 cut(s) 54, 906
BstYI RGATCY 2 cut(s) 54, 906
Bsu15I ATCGAT 1 cut(s) 237
Bsu36I CCTNAGG 1 cut(s) 459
BsuRI GGCC 5 cut(s) 145, 305, 365, 487, 756
BsuTUI ATCGAT 1 cut(s) 237
BtgI CCRYGG 2 cut(s) 265, 1004
BtsCI GGATG 4 cut(s) 14, 130, 732, 948
BtsIMutI CAGTG 1 cut(s) 445
Cac8I GCNNGC 5 cut(s) 395, 399, 549, 758, 800
CfoI GCGC 1 cut(s) 471
Cfr10I RCCGGY 1 cut(s) 988
Cfr13I GGNCC 1 cut(s) 143
Cfr42I CCGCGG 1 cut(s) 1007
ClaI ATCGAT 1 cut(s) 237
Csp6I GTAC 5 cut(s) 76, 152, 526, 569, 859
CspCI CAANNNNNGTGG 2 cut(s) 407, 442
CviAII CATG 6 cut(s) 207, 250, 266, 286, 745, 817
CviQI GTAC 5 cut(s) 76, 152, 526, 569, 859
DdeI CTNAG 4 cut(s) 459, 539, 675, 845
DpnI GATC 6 cut(s) 56, 65, 324, 908, 947, 995
DpnII GATC 6 cut(s) 54, 63, 322, 906, 945, 993
Eam1104I CTCTTC 3 cut(s) 84, 125, 770
EarI CTCTTC 3 cut(s) 84, 125, 770
Ecl136II GAGCTC 2 cut(s) 97, 283
Eco130I CCWWGG 4 cut(s) 265, 531, 834, 936
Eco147I AGGCCT 1 cut(s) 365
Eco24I GRGCYC 3 cut(s) 99, 285, 885
Eco31I GGTCTC 1 cut(s) 76
Eco53kI GAGCTC 2 cut(s) 97, 283
Eco81I CCTNAGG 1 cut(s) 459
Eco88I CYCGRG 1 cut(s) 367
EcoICRI GAGCTC 2 cut(s) 97, 283
EcoO109I RGGNCCY 1 cut(s) 143
EcoRII CCWGG 2 cut(s) 360, 1050
EcoT14I CCWWGG 4 cut(s) 265, 531, 834, 936
EcoT38I GRGCYC 3 cut(s) 99, 285, 885
ErhI CCWWGG 4 cut(s) 265, 531, 834, 936
FaeI CATG 6 cut(s) 210, 253, 269, 289, 748, 820
FalI AAGNNNNNCTT 2 cut(s) 458, 490
FatI CATG 6 cut(s) 206, 249, 265, 285, 744, 816
FauI CCCGC 1 cut(s) 44
FokI GGATG 3 cut(s) 137, 719, 935
FriOI GRGCYC 3 cut(s) 99, 285, 885
FspBI CTAG 2 cut(s) 548, 1092
GlaI GCGC 1 cut(s) 470
GsuI CTGGAG 1 cut(s) 626
HaeIII GGCC 5 cut(s) 145, 305, 365, 487, 756
HapII CCGG 6 cut(s) 306, 414, 680, 753, 965, 989
HhaI GCGC 1 cut(s) 471
Hin1II CATG 6 cut(s) 210, 253, 269, 289, 748, 820
Hin6I GCGC 1 cut(s) 469
HinP1I GCGC 1 cut(s) 469
HincII GTYRAC 2 cut(s) 262, 889
HindII GTYRAC 2 cut(s) 262, 889
HindIII AAGCTT 1 cut(s) 395
HinfI GANTC 3 cut(s) 179, 624, 841
HpaII CCGG 6 cut(s) 306, 414, 680, 753, 965, 989
HphI GGTGA 6 cut(s) 16, 122, 208, 718, 796, 913
Hpy166II GTNNAC 4 cut(s) 262, 623, 722, 889
Hpy188I TCNGA 6 cut(s) 184, 277, 502, 846, 979, 1018
Hpy188III TCNNGA 4 cut(s) 27, 58, 298, 458
Hpy8I GTNNAC 4 cut(s) 262, 623, 722, 889
Hpy99I CGWCG 2 cut(s) 64, 281
HpyAV CCTTC 9 cut(s) 134, 163, 295, 325, 507, 590, 604, 739, 892
HpyCH4III ACNGT 3 cut(s) 449, 568, 973
HpyCH4IV ACGT 1 cut(s) 78
HpyCH4V TGCA 7 cut(s) 14, 253, 401, 643, 722, 760, 820
HpyF10VI GCNNNNNNNGC 4 cut(s) 311, 390, 407, 1027
HpyF3I CTNAG 4 cut(s) 459, 539, 675, 845
HpySE526I ACGT 1 cut(s) 78
Hsp92II CATG 6 cut(s) 210, 253, 269, 289, 748, 820
HspAI GCGC 1 cut(s) 469
KspI CCGCGG 1 cut(s) 1007
Kzo9I GATC 6 cut(s) 54, 63, 322, 906, 945, 993
LguI GCTCTTC 2 cut(s) 125, 770
LmnI GCTCC 2 cut(s) 94, 1100
Lsp1109I GCAGC 7 cut(s) 60, 242, 772, 948, 1066, 1090, 1114
LweI GCATC 2 cut(s) 23, 279
MaeI CTAG 2 cut(s) 548, 1092
MaeII ACGT 1 cut(s) 78
MaeIII GTNAC 3 cut(s) 4, 110, 784
MalI GATC 6 cut(s) 56, 65, 324, 908, 947, 995
MboI GATC 6 cut(s) 54, 63, 322, 906, 945, 993
MflI RGATCY 2 cut(s) 54, 906
MhlI GDGCHC 7 cut(s) 99, 137, 285, 339, 724, 804, 885
MluCI AATT 2 cut(s) 375, 655
MlyI GAGTC 2 cut(s) 173, 618
MmeI TCCRAC 1 cut(s) 300
MseI TTAA 2 cut(s) 102, 1132
MslI CAYNNNNRTG 2 cut(s) 194, 815
MspA1I CMGCKG 3 cut(s) 51, 961, 1006
MspI CCGG 6 cut(s) 306, 414, 680, 753, 965, 989
MspR9I CCNGG 4 cut(s) 362, 415, 753, 1052
Mva1269I GAATGC 1 cut(s) 867
MvaI CCWGG 2 cut(s) 362, 1052
MvnI CGCG 2 cut(s) 471, 1006
MwoI GCNNNNNNNGC 4 cut(s) 311, 390, 407, 1027
NciI CCSGG 2 cut(s) 415, 753
NcoI CCATGG 1 cut(s) 265
NdeII GATC 6 cut(s) 54, 63, 322, 906, 945, 993
NheI GCTAGC 1 cut(s) 547
NlaIII CATG 6 cut(s) 210, 253, 269, 289, 748, 820
NlaIV GGNNCC 2 cut(s) 750, 987
NmeAIII GCCGAG 1 cut(s) 672
NmuCI GTSAC 3 cut(s) 4, 110, 784
NspI RCATGY 1 cut(s) 210
PceI AGGCCT 1 cut(s) 365
PciI ACATGT 1 cut(s) 206
PciSI GCTCTTC 2 cut(s) 125, 770
PcsI WCGNNNNNNNCGW 3 cut(s) 84, 624, 633
PctI GAATGC 1 cut(s) 867
PfeI GAWTC 1 cut(s) 841
PflMI CCANNNNNTGG 2 cut(s) 240, 745
PleI GAGTC 2 cut(s) 173, 618
PpsI GAGTC 2 cut(s) 173, 618
Ppu21I YACGTR 1 cut(s) 79
PscI ACATGT 1 cut(s) 206
Psp124BI GAGCTC 2 cut(s) 99, 285
Psp6I CCWGG 2 cut(s) 360, 1050
PspGI CCWGG 2 cut(s) 360, 1050
PspN4I GGNNCC 2 cut(s) 750, 987
PspPI GGNCC 1 cut(s) 143
PstI CTGCAG 1 cut(s) 762
PsuI RGATCY 2 cut(s) 54, 906
RsaI GTAC 5 cut(s) 77, 153, 527, 570, 860
RsaNI GTAC 5 cut(s) 76, 152, 526, 569, 859
RseI CAYNNNNRTG 2 cut(s) 194, 815
SacI GAGCTC 2 cut(s) 99, 285
SacII CCGCGG 1 cut(s) 1007
SapI GCTCTTC 2 cut(s) 125, 770
SaqAI TTAA 2 cut(s) 102, 1132
Sau3AI GATC 6 cut(s) 54, 63, 322, 906, 945, 993
Sau96I GGNCC 1 cut(s) 143
SchI GAGTC 2 cut(s) 173, 618
ScrFI CCNGG 4 cut(s) 362, 415, 753, 1052
SduI GDGCHC 7 cut(s) 99, 137, 285, 339, 724, 804, 885
SfaNI GCATC 2 cut(s) 23, 279
SfcI CTRYAG 1 cut(s) 758
Sfr303I CCGCGG 1 cut(s) 1007
SgrBI CCGCGG 1 cut(s) 1007
SmiMI CAYNNNNRTG 2 cut(s) 194, 815
SmlI CTYRAG 3 cut(s) 147, 422, 953
SmoI CTYRAG 3 cut(s) 147, 422, 953
SpeI ACTAGT 1 cut(s) 1091
Sse9I AATT 2 cut(s) 375, 655
SseBI AGGCCT 1 cut(s) 365
SsiI CCGC 6 cut(s) 51, 774, 917, 959, 1004, 1006
SspMI CTAG 2 cut(s) 548, 1092
SstI GAGCTC 2 cut(s) 99, 285
StuI AGGCCT 1 cut(s) 365
StyD4I CCNGG 4 cut(s) 360, 413, 751, 1050
StyI CCWWGG 4 cut(s) 265, 531, 834, 936
TaaI ACNGT 3 cut(s) 449, 568, 973
TaiI ACGT 1 cut(s) 81
TaqI TCGA 4 cut(s) 59, 120, 237, 627
TasI AATT 2 cut(s) 375, 655
TatI WGTACW 1 cut(s) 858
TauI GCSGC 2 cut(s) 777, 961
TfiI GAWTC 1 cut(s) 841
Tru1I TTAA 2 cut(s) 102, 1132
Tru9I TTAA 2 cut(s) 102, 1132
TscAI CASTG 1 cut(s) 452
TseFI GTSAC 3 cut(s) 4, 110, 784
TseI GCWGC 8 cut(s) 11, 48, 230, 760, 961, 1079, 1103, 1127
Tsp45I GTSAC 3 cut(s) 4, 110, 784
TspDTI ATGAA 2 cut(s) 662, 721
TspGWI ACGGA 2 cut(s) 402, 469
TspRI CASTG 1 cut(s) 452
Van91I CCANNNNNTGG 2 cut(s) 240, 745
VneI GTGCAC 1 cut(s) 720
XapI RAATTY 1 cut(s) 375
XceI RCATGY 1 cut(s) 210
XspI CTAG 2 cut(s) 548, 1092
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.