Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0014111

Physical Location & Seq

Genomic Coordinates Forward (+)

3042926 .. 3047697

Gene Structure 4772 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g05220.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1965 bp

ATGGCTGCACCCAATTCCTGGGGGGTCACGGTTCAGGCGGCGATCCCAGTCGCCCAATTTGGACCTTTCTCTTGCTCCTCCGGTTTCCTAGCCCATAACAAGTCCCTCAAATTCAACCCCGCCACTACTAAAAGCCTCGGCTGCCTCCTCACCTTCTCTCTCCAATCCAAGCCGAGTAGTTCGAGCAGGAACAGAAGACTGTGCTGCAGCTGCGGCGAGAGTAACGGCGCTAGTAGTGTTGACTGCGCCGCCGAGTCTTCTCTGCAATGGGATTGGAATCAGTGGAGCCGCCATTTCAATGAGATTGAACAAGCCGAGAGCTTCGCCTCCGTGCTCAAGTTTCAACTGGAGGATGCGATTGAGAAGGAAGACTTCCAGGAAGCTGTGAAGCTGAAAATGACGATTGCGGAAGCTACAAGGAAGGACACGGTTTCGAAGATCATGGCTCAGTTGAAGATTGCAATCGAGGAGGAGCGTTACCATGATGCTTCGAAATTGTGTAAACACACAGGAAGTGGACTGGTAGGTTGGTGGGTGGGTTACCCAAAAGATACAGATGATCCCTTTGGGAGACTCGTACGAATAACTCCTGGTGTTGGTAGATTTGTTGGCAGGACTTACAGTCCAAGGCAGTTGGTTTCAGCATCTCCTGGTAGTCCCCTATTTGAAATTTTTGTCGTTAAAAATGCAGATGGGACATATGTTATGCAGGTAGTGTACTTGCAAGAAGTCAAAGCCAACTCCACTGCTTCACCATCCAAACCTGAAAAAGGCTCATCTACTCCTGAAGTTCAAAATGCAACCGTAGTAGATGTTCAGAAAAATGAAGATAATGTAGAGAGCAGCGATGAGAAAGGACTTAATATTGAGGGAGCAACTGAGGAGGGTATAAAAAGTGTGATAAATTTTCTGAAGAAAAAAATTCCAGGACTGAAAATTAAAGTTAGGAATGTTGATGTTGCTAAGGAAGTAATGGAGGACAACAATTTGGTTAACCGGCTGATGCAGGAAAATAGTGAAAACTCTGAATCTGATGAAAATTCTGAAGATGAAGGTGATAATTTGGACGAAATTCAGCCTGACGAGGTCACTCTAGGAGAGAGTAGTGATACCACAGAAGATGAAAAAGATTTGGACATGAAACTTTTTATTGGGGAAATTGTACATAATGAGGATACTGCTACCAAGGATGAGTACGTACGTCGTCCTGCTGAAATCAAGGATATGGAGAGAGAATCTTTTGTGCTGCATATTCCGGGGAGAAGCCTAGACCATGATACTAGAGAAAGTAAAGCATCCAAGATCAAAGTGGCAGCTCAAGCAGCTAAAAGTGTCTCCGAGCTAATGCCATCTGATGTTGCCAAGGCATTTTGGAACTCCGACAAGGTTTCTCCGAAGGTTACCAAAAATATGCGTGAAATAATCAGACTTGCTGCAAGTCAAGCATATAAGCGGAGTACATTATCTGAGTATACAACATTTAATCGGATCAGCACCTCAGGAGGAGATCTGGATCCATTTGAAGGTCTGTATGTTGGTGCTTTTGGTCCTTATGGCACTGAGATAGTGCAACTCAGGCGTAAGTATGGGCACTGGAATGGCTCAGATGACAAAGAAGATTCTGGCGACGTGGAGTTCTTTGAATATGTTGAAGCGGTTAAGCTAACTGGGGATCTAAATGTTCCTGCTGGCCAGGTGACATTTCGTGCCAAAATTGGGAGAGGAAGTCGCCTTTCCAACCGTGGAATGTATCCAGATGAATTAGGAGTGGTTGCAAGTTACAAGGGCCAAGGACGGATAGCAGAAATTGGCTTTCGAAATCCAAAATGGGTTGAAGGAGAACTACTCCAACTCAATGCCAAGGGTATTGGACCTTATGCCAAAGGTGCAGATCTTGGTTTTCTTTACATTGTCCCAGAGCAAAGTTTCCTAGTATTATTCAATCGCCTGAAACTACCAGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0000304 GO:0005575 GO:0005622 GO:0005623 GO:0006950 GO:0006979 GO:0007154 GO:0007584 GO:0008150 GO:0008219 GO:0009579 GO:0009605 GO:0009987 GO:0009991 GO:0010035 GO:0010343 GO:0012501 GO:0016020 GO:0031667 GO:0031668 GO:0031669 GO:0031670 GO:0033554 GO:0034357 GO:0034599 GO:0034614 GO:0035690 GO:0036473 GO:0042221 GO:0042493 GO:0042651 GO:0044424 GO:0044436 GO:0044464 GO:0050896 GO:0051716 GO:0070887 GO:0071452 GO:0071496 GO:0097468 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3506 UVR

Protein Analysis

655

Amino Acids

72.35

Weight (kDa)

5.22

Isoelectric Point (pI)

41.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cyclin_D1_bind	PF12014	501 - 652	9.6e-32	Cyclin D1 binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014111)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27510
fragaria_vesca	FvH4_5g05220
malus_domestica	MD06G1175500.v1.1 MD14G1182300.v1.1
prunus_persica	Prupe.5G174800_v2.0.a1
pyrus_communis	pycom06g15620 pycom14g15120
rosa_chinensis	RchiOBHm_Chr7g0193691
rosa_laevigata	RLG00000004251
rosa_multiflora	Rmu_sc0001436.1_g000008
rosa_roxburghii	Rroxscaffold_3G00261900
rosa_rugosa	Rorug07G0011400
rosa_samantha	Rh7AG138100 Rh7BG138300 Rh7CG142000 Rh7DG139400
rosa_wichuraiana	Rw7G011760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	700
AccB7I	CCANNNNNTGG	1 cut(s)	18
AccI	GTMKAC	1 cut(s)	1472
AciI	CCGC	8 cut(s)	38, 120, 213, 249, 289, 407, 1453, 1655
AclWI	GGATC	6 cut(s)	37, 554, 1496, 1508, 1521, 1680
AcoI	YGGCCR	1 cut(s)	1690
AcsI	RAATTY	6 cut(s)	110, 669, 904, 921, 1039, 1071
AcuI	CTGAAG	3 cut(s)	807, 932, 1065
AfaI	GTAC	6 cut(s)	579, 719, 1164, 1196, 1200, 1459
AfiI	CCNNNNNNNGG	5 cut(s)	18, 596, 770, 1523, 1716
AhdI	GACNNNNNGTC	1 cut(s)	621
AjiI	CACGTC	1 cut(s)	1630
AjnI	CCWGG	6 cut(s)	17, 375, 589, 649, 925, 1692
AluBI	AGCT	9 cut(s)	210, 321, 383, 391, 413, 1316, 1325, 1342, 1663
AluI	AGCT	9 cut(s)	210, 321, 383, 391, 413, 1316, 1325, 1342, 1663
Alw21I	GWGCWC	1 cut(s)	336
Alw26I	GTCTC	2 cut(s)	565, 1339
AlwI	GGATC	6 cut(s)	37, 554, 1496, 1508, 1521, 1680
AoxI	GGCC	2 cut(s)	1690, 1786
ApoI	RAATTY	6 cut(s)	110, 669, 904, 921, 1039, 1071
AspLEI	GCGC	2 cut(s)	230, 248
AspS9I	GGNCC	4 cut(s)	62, 1547, 1786, 1871
AsuC2I	CCSGG	1 cut(s)	1257
AsuHPI	GGTGA	4 cut(s)	142, 744, 1067, 1708
AsuII	TTCGAA	3 cut(s)	434, 491, 1816
AvaII	GGWCC	3 cut(s)	62, 1547, 1871
AxyI	CCTNAGG	1 cut(s)	1498
BaeGI	GKGCMC	1 cut(s)	1593
BalI	TGGCCA	1 cut(s)	1692
BamHI	GGATCC	1 cut(s)	1513
BarI	GAAGNNNNNNTAC	2 cut(s)	1827, 1859
BbsI	GAAGAC	3 cut(s)	202, 249, 375
Bbv12I	GWGCWC	1 cut(s)	336
BbvI	GCAGC	9 cut(s)	128, 191, 197, 219, 855, 1233, 1325, 1334, 1420
BccI	CCATC	3 cut(s)	686, 763, 1357
BceAI	ACGGC	1 cut(s)	241
BciT130I	CCWGG	6 cut(s)	19, 377, 591, 651, 927, 1694
BciVI	GTATCC	2 cut(s)	1168, 1761
BcnI	CCSGG	1 cut(s)	1257
BcoDI	GTCTC	2 cut(s)	565, 1339
BfaI	CTAG	6 cut(s)	89, 231, 1094, 1268, 1281, 1931
BfmI	CTRYAG	1 cut(s)	205
BfoI	RGCGCY	1 cut(s)	231
BfuAI	ACCTGC	1 cut(s)	700
BfuI	GTATCC	2 cut(s)	1168, 1761
BglII	AGATCT	2 cut(s)	1507, 1891
Bme1390I	CCNGG	7 cut(s)	19, 377, 591, 651, 927, 1257, 1694
Bme18I	GGWCC	3 cut(s)	62, 1547, 1871
BmeRI	GACNNNNNGTC	1 cut(s)	621
BmgBI	CACGTC	1 cut(s)	1630
BmgT120I	GGNCC	4 cut(s)	62, 1547, 1786, 1871
BmiI	GGNNCC	2 cut(s)	287, 1515
BmrFI	CCNGG	7 cut(s)	19, 377, 591, 651, 927, 1257, 1694
BmrI	ACTGGG	2 cut(s)	41, 1677
BmsI	GCATC	5 cut(s)	343, 475, 653, 993, 1304
BmuI	ACTGGG	2 cut(s)	41, 1677
BpiI	GAAGAC	3 cut(s)	202, 249, 375
BplI	GAGNNNNNCTC	2 cut(s)	1830, 1862
BpmI	CTGGAG	1 cut(s)	368
Bpu10I	CCTNAGC	1 cut(s)	963
Bpu14I	TTCGAA	3 cut(s)	434, 491, 1816
BpuEI	CTTGAG	2 cut(s)	320, 1302
BpuMI	CCSGG	1 cut(s)	1257
BsaAI	YACGTR	1 cut(s)	1198
BsaBI	GATNNNNATC	3 cut(s)	276, 461, 1512
BsaJI	CCNNGG	9 cut(s)	18, 136, 626, 1185, 1256, 1362, 1741, 1789, 1860
BsaWI	WCCGGW	1 cut(s)	80
BsaXI	ACNNNNNCTCC	2 cut(s)	1711, 1741
Bsc4I	CCNNNNNNNGG	5 cut(s)	18, 596, 770, 1523, 1716
Bse118I	RCCGGY	1 cut(s)	996
Bse1I	ACTGG	5 cut(s)	47, 351, 525, 1598, 1672
Bse21I	CCTNAGG	1 cut(s)	1498
Bse3DI	GCAATG	1 cut(s)	272
Bse8I	GATNNNNATC	3 cut(s)	276, 461, 1512
BseBI	CCWGG	6 cut(s)	19, 377, 591, 651, 927, 1694
BseDI	CCNNGG	9 cut(s)	18, 136, 626, 1185, 1256, 1362, 1741, 1789, 1860
BseGI	GGATG	4 cut(s)	358, 755, 1195, 1295
BseJI	GATNNNNATC	3 cut(s)	276, 461, 1512
BseLI	CCNNNNNNNGG	5 cut(s)	18, 596, 770, 1523, 1716
BseMI	GCAATG	1 cut(s)	272
BseMII	CTCAG	7 cut(s)	461, 870, 1458, 1512, 1551, 1588, 1617
BseNI	ACTGG	5 cut(s)	47, 351, 525, 1598, 1672
BseRI	GAGGAG	6 cut(s)	67, 137, 482, 485, 896, 1518
BseSI	GKGCMC	1 cut(s)	1593
BseXI	GCAGC	9 cut(s)	128, 191, 197, 219, 855, 1233, 1325, 1334, 1420
BsgI	GTGCAG	1 cut(s)	1908
BshFI	GGCC	2 cut(s)	1692, 1788
BsiHKAI	GWGCWC	1 cut(s)	336
BsiSI	CCGG	3 cut(s)	81, 997, 1256
BsiWI	CGTACG	2 cut(s)	577, 1198
BslFI	GGGAC	4 cut(s)	88, 642, 709, 1898
BslI	CCNNNNNNNGG	5 cut(s)	18, 596, 770, 1523, 1716
BsmAI	GTCTC	2 cut(s)	565, 1339
BsmFI	GGGAC	4 cut(s)	88, 642, 709, 1898
BsnI	GGCC	2 cut(s)	1692, 1788
Bsp119I	TTCGAA	3 cut(s)	434, 491, 1816
Bsp1286I	GDGCHC	2 cut(s)	336, 1593
Bsp1407I	TGTACA	1 cut(s)	1162
Bsp143I	GATC	9 cut(s)	42, 438, 559, 1302, 1488, 1507, 1513, 1672, 1891
BspACI	CCGC	8 cut(s)	38, 120, 213, 249, 289, 407, 1453, 1655
BspANI	GGCC	2 cut(s)	1692, 1788
BspCNI	CTCAG	7 cut(s)	460, 871, 1459, 1511, 1552, 1587, 1616
BspLI	GGNNCC	2 cut(s)	287, 1515
BspMAI	CTGCAG	1 cut(s)	209
BspMI	ACCTGC	1 cut(s)	700
BspPI	GGATC	6 cut(s)	37, 554, 1496, 1508, 1521, 1680
BspT104I	TTCGAA	3 cut(s)	434, 491, 1816
BsrDI	GCAATG	1 cut(s)	272
BsrFI	RCCGGY	1 cut(s)	996
BsrGI	TGTACA	1 cut(s)	1162
BsrI	ACTGG	5 cut(s)	47, 351, 525, 1598, 1672
BssAI	RCCGGY	1 cut(s)	996
BssECI	CCNNGG	9 cut(s)	18, 136, 626, 1185, 1256, 1362, 1741, 1789, 1860
BssMI	GATC	9 cut(s)	42, 438, 559, 1302, 1488, 1507, 1513, 1672, 1891
BssNAI	GTATAC	1 cut(s)	1473
BssT1I	CCWWGG	5 cut(s)	626, 1185, 1362, 1789, 1860
Bst1107I	GTATAC	1 cut(s)	1473
Bst2UI	CCWGG	6 cut(s)	19, 377, 591, 651, 927, 1694
Bst4CI	ACNGT	6 cut(s)	31, 201, 430, 623, 805, 1742
BstAUI	TGTACA	1 cut(s)	1162
BstBAI	YACGTR	1 cut(s)	1198
BstBI	TTCGAA	3 cut(s)	434, 491, 1816
BstC8I	GCNNGC	1 cut(s)	1690
BstDEI	CTNAG	8 cut(s)	447, 879, 963, 1467, 1498, 1560, 1574, 1603
BstDSI	CCRYGG	1 cut(s)	1741
BstEII	GGTNACC	2 cut(s)	539, 1399
BstENI	CCTNNNNNAGG	1 cut(s)	768
BstF5I	GGATG	4 cut(s)	358, 755, 1195, 1295
BstH2I	RGCGCY	1 cut(s)	231
BstHHI	GCGC	2 cut(s)	230, 248
BstKTI	GATC	9 cut(s)	45, 441, 562, 1305, 1491, 1510, 1516, 1675, 1894
BstMAI	GTCTC	2 cut(s)	565, 1339
BstMBI	GATC	9 cut(s)	42, 438, 559, 1302, 1488, 1507, 1513, 1672, 1891
BstMWI	GCNNNNNNNGC	8 cut(s)	141, 210, 213, 1319, 1322, 1442, 1576, 1886
BstNI	CCWGG	6 cut(s)	19, 377, 591, 651, 927, 1694
BstPI	GGTNACC	2 cut(s)	539, 1399
BstSCI	CCNGG	7 cut(s)	17, 375, 589, 649, 925, 1255, 1692
BstSFI	CTRYAG	1 cut(s)	205
BstSLI	GKGCMC	1 cut(s)	1593
BstSNI	TACGTA	1 cut(s)	1198
BstV1I	GCAGC	9 cut(s)	128, 191, 197, 219, 855, 1233, 1325, 1334, 1420
BstV2I	GAAGAC	3 cut(s)	202, 249, 375
BstX2I	RGATCY	4 cut(s)	1507, 1513, 1672, 1891
BstYI	RGATCY	4 cut(s)	1507, 1513, 1672, 1891
BstZ17I	GTATAC	1 cut(s)	1473
Bsu36I	CCTNAGG	1 cut(s)	1498
BsuI	GTATCC	2 cut(s)	1168, 1761
BsuRI	GGCC	2 cut(s)	1692, 1788
BtgI	CCRYGG	1 cut(s)	1741
BtgZI	GCGATG	1 cut(s)	861
BtrI	CACGTC	1 cut(s)	1630
BtsCI	GGATG	4 cut(s)	358, 755, 1195, 1295
BtsI	GCAGTG	1 cut(s)	744
BtsIMutI	CAGTG	4 cut(s)	287, 744, 1557, 1591
BveI	ACCTGC	1 cut(s)	700
Cac8I	GCNNGC	1 cut(s)	1690
CfoI	GCGC	2 cut(s)	230, 248
Cfr10I	RCCGGY	1 cut(s)	996
Cfr13I	GGNCC	4 cut(s)	62, 1547, 1786, 1871
Csp6I	GTAC	6 cut(s)	578, 718, 1163, 1195, 1199, 1458
CviAII	CATG	4 cut(s)	442, 482, 1138, 1274
CviQI	GTAC	6 cut(s)	578, 718, 1163, 1195, 1199, 1458
DdeI	CTNAG	8 cut(s)	447, 879, 963, 1467, 1498, 1560, 1574, 1603
DpnI	GATC	9 cut(s)	44, 440, 561, 1304, 1490, 1509, 1515, 1674, 1893
DpnII	GATC	9 cut(s)	42, 438, 559, 1302, 1488, 1507, 1513, 1672, 1891
DriI	GACNNNNNGTC	1 cut(s)	621
EaeI	YGGCCR	1 cut(s)	1690
Eam1105I	GACNNNNNGTC	1 cut(s)	621
Eco105I	TACGTA	1 cut(s)	1198
Eco130I	CCWWGG	5 cut(s)	626, 1185, 1362, 1789, 1860
Eco47I	GGWCC	3 cut(s)	62, 1547, 1871
Eco57I	CTGAAG	3 cut(s)	807, 932, 1065
Eco81I	CCTNAGG	1 cut(s)	1498
Eco91I	GGTNACC	2 cut(s)	539, 1399
EcoNI	CCTNNNNNAGG	1 cut(s)	768
EcoO65I	GGTNACC	2 cut(s)	539, 1399
EcoRII	CCWGG	6 cut(s)	17, 375, 589, 649, 925, 1692
EcoT14I	CCWWGG	5 cut(s)	626, 1185, 1362, 1789, 1860
ErhI	CCWWGG	5 cut(s)	626, 1185, 1362, 1789, 1860
FaeI	CATG	4 cut(s)	445, 485, 1141, 1277
FalI	AAGNNNNNCTT	2 cut(s)	356, 388
FaqI	GGGAC	4 cut(s)	88, 642, 709, 1898
FatI	CATG	4 cut(s)	441, 481, 1137, 1273
FauI	CCCGC	1 cut(s)	127
FauNDI	CATATG	1 cut(s)	700
FblI	GTMKAC	1 cut(s)	1472
FokI	GGATG	4 cut(s)	365, 742, 1202, 1282
FspBI	CTAG	6 cut(s)	89, 231, 1094, 1268, 1281, 1931
GlaI	GCGC	2 cut(s)	229, 247
GsuI	CTGGAG	1 cut(s)	368
HaeII	RGCGCY	1 cut(s)	231
HaeIII	GGCC	2 cut(s)	1692, 1788
HapII	CCGG	3 cut(s)	81, 997, 1256
HhaI	GCGC	2 cut(s)	230, 248
Hin1II	CATG	4 cut(s)	445, 485, 1141, 1277
Hin6I	GCGC	2 cut(s)	228, 246
HinP1I	GCGC	2 cut(s)	228, 246
HincII	GTYRAC	2 cut(s)	241, 994
HindII	GTYRAC	2 cut(s)	241, 994
HinfI	GANTC	6 cut(s)	254, 277, 573, 1028, 1235, 1619
HpaI	GTTAAC	1 cut(s)	994
HpaII	CCGG	3 cut(s)	81, 997, 1256
HphI	GGTGA	4 cut(s)	142, 744, 1067, 1708
Hpy166II	GTNNAC	6 cut(s)	241, 503, 518, 718, 994, 1473
Hpy188III	TCNNGA	4 cut(s)	785, 1500, 1511, 1754
Hpy8I	GTNNAC	6 cut(s)	241, 503, 518, 718, 994, 1473
Hpy99I	CGWCG	2 cut(s)	1206, 1631
HpyAV	CCTTC	7 cut(s)	163, 358, 415, 1046, 1390, 1517, 1829
HpyCH4III	ACNGT	6 cut(s)	31, 201, 430, 623, 805, 1742
HpyCH4IV	ACGT	3 cut(s)	1197, 1201, 1629
HpyF10VI	GCNNNNNNNGC	8 cut(s)	141, 210, 213, 1319, 1322, 1442, 1576, 1886
HpyF3I	CTNAG	8 cut(s)	447, 879, 963, 1467, 1498, 1560, 1574, 1603
HpySE526I	ACGT	3 cut(s)	1197, 1201, 1629
Hsp92II	CATG	4 cut(s)	445, 485, 1141, 1277
HspAI	GCGC	2 cut(s)	228, 246
KspAI	GTTAAC	1 cut(s)	994
Kzo9I	GATC	9 cut(s)	42, 438, 559, 1302, 1488, 1507, 1513, 1672, 1891
LmnI	GCTCC	4 cut(s)	80, 285, 472, 872
Lsp1109I	GCAGC	9 cut(s)	128, 191, 197, 219, 855, 1233, 1325, 1334, 1420
LweI	GCATC	5 cut(s)	343, 475, 653, 993, 1304
MaeI	CTAG	6 cut(s)	89, 231, 1094, 1268, 1281, 1931
MaeII	ACGT	3 cut(s)	1197, 1201, 1629
MaeIII	GTNAC	8 cut(s)	25, 221, 476, 539, 1087, 1399, 1696, 1778
MalI	GATC	9 cut(s)	44, 440, 561, 1304, 1490, 1509, 1515, 1674, 1893
MboI	GATC	9 cut(s)	42, 438, 559, 1302, 1488, 1507, 1513, 1672, 1891
MflI	RGATCY	4 cut(s)	1507, 1513, 1672, 1891
MhlI	GDGCHC	2 cut(s)	336, 1593
MlsI	TGGCCA	1 cut(s)	1692
MluNI	TGGCCA	1 cut(s)	1692
MlyI	GAGTC	2 cut(s)	263, 567
MmeI	TCCRAC	3 cut(s)	1404, 1761, 1873
Mox20I	TGGCCA	1 cut(s)	1692
MscI	TGGCCA	1 cut(s)	1692
MseI	TTAA	6 cut(s)	681, 861, 939, 993, 1482, 1659
MslI	CAYNNNNRTG	2 cut(s)	297, 1596
Msp20I	TGGCCA	1 cut(s)	1692
MspA1I	CMGCKG	1 cut(s)	210
MspI	CCGG	3 cut(s)	81, 997, 1256
MspR9I	CCNGG	7 cut(s)	19, 377, 591, 651, 927, 1257, 1694
MvaI	CCWGG	6 cut(s)	19, 377, 591, 651, 927, 1694
MwoI	GCNNNNNNNGC	8 cut(s)	141, 210, 213, 1319, 1322, 1442, 1576, 1886
NciI	CCSGG	1 cut(s)	1257
NdeI	CATATG	1 cut(s)	700
NdeII	GATC	9 cut(s)	42, 438, 559, 1302, 1488, 1507, 1513, 1672, 1891
NlaIII	CATG	4 cut(s)	445, 485, 1141, 1277
NlaIV	GGNNCC	2 cut(s)	287, 1515
NmeAIII	GCCGAG	4 cut(s)	117, 198, 277, 340
NmuCI	GTSAC	3 cut(s)	25, 1087, 1696
NspV	TTCGAA	3 cut(s)	434, 491, 1816
PfeI	GAWTC	4 cut(s)	277, 1028, 1235, 1619
Pfl23II	CGTACG	2 cut(s)	577, 1198
PflFI	GACNNNGTC	1 cut(s)	1085
PflMI	CCANNNNNTGG	1 cut(s)	18
PfoI	TCCNGGA	2 cut(s)	375, 925
PleI	GAGTC	2 cut(s)	262, 567
PpsI	GAGTC	2 cut(s)	262, 567
Ppu21I	YACGTR	1 cut(s)	1198
Psp6I	CCWGG	6 cut(s)	17, 375, 589, 649, 925, 1692
PspEI	GGTNACC	2 cut(s)	539, 1399
PspGI	CCWGG	6 cut(s)	17, 375, 589, 649, 925, 1692
PspLI	CGTACG	2 cut(s)	577, 1198
PspN4I	GGNNCC	2 cut(s)	287, 1515
PspPI	GGNCC	4 cut(s)	62, 1547, 1786, 1871
PsrI	GAACNNNNNNTAC	2 cut(s)	798, 830
PstI	CTGCAG	1 cut(s)	209
PsuI	RGATCY	4 cut(s)	1507, 1513, 1672, 1891
PsyI	GACNNNGTC	1 cut(s)	1085
PvuII	CAGCTG	1 cut(s)	210
RsaI	GTAC	6 cut(s)	579, 719, 1164, 1196, 1200, 1459
RsaNI	GTAC	6 cut(s)	578, 718, 1163, 1195, 1199, 1458
RseI	CAYNNNNRTG	2 cut(s)	297, 1596
SaqAI	TTAA	6 cut(s)	681, 861, 939, 993, 1482, 1659
Sau3AI	GATC	9 cut(s)	42, 438, 559, 1302, 1488, 1507, 1513, 1672, 1891
Sau96I	GGNCC	4 cut(s)	62, 1547, 1786, 1871
SchI	GAGTC	2 cut(s)	263, 567
ScrFI	CCNGG	7 cut(s)	19, 377, 591, 651, 927, 1257, 1694
SduI	GDGCHC	2 cut(s)	336, 1593
SfaNI	GCATC	5 cut(s)	343, 475, 653, 993, 1304
SfcI	CTRYAG	1 cut(s)	205
SfuI	TTCGAA	3 cut(s)	434, 491, 1816
SinI	GGWCC	3 cut(s)	62, 1547, 1871
SmiMI	CAYNNNNRTG	2 cut(s)	297, 1596
SmlI	CTYRAG	2 cut(s)	335, 1317
SmoI	CTYRAG	2 cut(s)	335, 1317
SnaBI	TACGTA	1 cut(s)	1198
SsiI	CCGC	8 cut(s)	38, 120, 213, 249, 289, 407, 1453, 1655
SspI	AATATT	1 cut(s)	865
SspMI	CTAG	6 cut(s)	89, 231, 1094, 1268, 1281, 1931
StyD4I	CCNGG	7 cut(s)	17, 375, 589, 649, 925, 1255, 1692
StyI	CCWWGG	5 cut(s)	626, 1185, 1362, 1789, 1860
TaaI	ACNGT	6 cut(s)	31, 201, 430, 623, 805, 1742
TaiI	ACGT	3 cut(s)	1200, 1204, 1632
TaqI	TCGA	5 cut(s)	182, 434, 465, 491, 1816
TatI	WGTACW	3 cut(s)	717, 1162, 1457
TauI	GCSGC	4 cut(s)	41, 216, 251, 291
TfiI	GAWTC	4 cut(s)	277, 1028, 1235, 1619
Tru1I	TTAA	6 cut(s)	681, 861, 939, 993, 1482, 1659
Tru9I	TTAA	6 cut(s)	681, 861, 939, 993, 1482, 1659
TscAI	CASTG	4 cut(s)	287, 751, 1564, 1598
TseFI	GTSAC	3 cut(s)	25, 1087, 1696
Tsp45I	GTSAC	3 cut(s)	25, 1087, 1696
TspDTI	ATGAA	6 cut(s)	840, 1050, 1065, 1137, 1154, 1773
TspGWI	ACGGA	2 cut(s)	319, 1810
TspRI	CASTG	4 cut(s)	287, 751, 1564, 1598
Tth111I	GACNNNGTC	1 cut(s)	1085
Van91I	CCANNNNNTGG	1 cut(s)	18
VpaK11BI	GGWCC	3 cut(s)	62, 1547, 1871
XagI	CCTNNNNNAGG	1 cut(s)	768
XapI	RAATTY	6 cut(s)	110, 669, 904, 921, 1039, 1071
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1306
XmiI	GTMKAC	1 cut(s)	1472
XspI	CTAG	6 cut(s)	89, 231, 1094, 1268, 1281, 1931

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.