Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0014111

Physical Location & Seq

Genomic Coordinates Reverse (-)

11835336 .. 11840159

Gene Structure 4824 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG139400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1959 bp

ATGGCGGTGGCCAATTCCTGTGTCGCGGCGGGTCAGGCAGCAATCCCGGTAGCCCAATTCGGACCCTTCTCTTGCTCCGGTCTCCTATCCAATAATAAGTCCATCAAATTCAACCACGCCAATAAAAATCTCGGCTGCCTTCTCACTTTCTCCGTCCAATCCAAGCCTTCGTCTGGTTCGAGTAGGAATAGAAAACTGTGTTGCAGTTGTGGTGGCGAGAATAACAGCACTAGTGTTGACTGTACCGGGTCTTCTTTGGAATGGGATTGGAACCAGTGGAGCCGCCATTTTTCTGAGATTGAACAAGCAGAGAGCTTTGCCTCTGTGCTCAAGTTTCAACTAGAAGATGCAATTGAGAAGCAAGACTTCCAAGAAGCTATGAAACTGAAAATGGCTATTGCAGAAGCTACATCAAAGGACACGGTTGCTAAGATCATGTCTCAGTTGAAGATTGCAATTGAGGAGGAGCGCTACCATGATGCTTCAAAATTGTGTAAACACACAGGCAGTGGACTGGTAGGCTGGTGGGTTGGCTACCCAAAAGATTCAGATGATCCCTTTGGAAGACTCATACGAATAACTCCTGGTGTTGGTAGATTTGTTGGCAGGACTTACAGTCCAAGGCAGTTGGTTACAGCATCTTCGGGGAGTCCCCTATTCGAAATTTTTGTCGTTAAAAATGCAGATGGGACATATGTTATGCAGGTGGTGTACTTGCAACAAGCCAAAGCCAACTCCACTGTTGCACCATCCAAACCTGAAAAAGGCTCATCTACTCCTGAAGTTCAGAATGCAACTGTAGTAGATGTTCAGAAAAATGAAGATAAGGTAGAGAGTAGCGAAGAGAAAGGACTTAATATTGAGGGAGCAACTGAGGAGGGTATAAAAAGTGTGATAAATTTTCTGAAGAAAAAACTTCCAGGACTGAAAGTTAAAGTTATGAATGTTGATGTTGCTAAGGAAATAATGGAGGACGACAATTCGGTAAACCAGCTGATGCAAGAAAATAGTGAAAACTCTGAATCTGATGAAAATTCTGAAGATGAAGTTGATACTTTGGACGAAATTCAGCCTGATGAGGTCACTCTAGGAGAGAGTGGTGATACCATAGATGATGAAAAAGATTTGGACATGAAACTTTTTATTGGGGGAATTGTACATAATGAGGATACTGCCACCAAGGATGAGTATGTTCGTCGACCTGCTGAAATCAAAGATATGGAGAGAGAATCTTTTGTGCTGCATATTCCGGGGAGAAGCCTAGATCATGATACTAGAGAAAGTAAAGCATCCAAGATAAAAGTGGCCGCTCAAGCAGCTAAAAGTGTCTCTGAGCTTATGCCATCTGATGTTGCCAAGGCATTTTGGAACTCCGACAAGCTTTCTCCAAAGGTTACCAAAAATATGCGTGAAATAGTGAAACTTGCTGTTAGTCAAGCACAGAAGCGGAGTAGATTATCTGAGTACACAACATTTAATCGGATCAGCACCTCACGAGGGGATCTTGATCCATTTGAAGGTCTGTATGTTGGTGCATTTGGTCCTTATGGCACTGAGGTAGTGCAACTCAGGCGTAAGTATGGGCACTGGAATGGTTCAGATGACAAAGACGATTCTGGCGATGTGGAGTTCTTCGAATATGTTGAGGCAGTGAAGCTAACTGGGGATCTAAATGTTCCTGCTGGCCAGGTGACATTTCGTGCTAAAATTGGGAGAGGGAGTCGTCTTTCCAACCGTGGAATGTATCCGGATGAATTAGGAGTGGTTGCAAGTTACAAGGGCCAAGGAAGGATAGCAGAATTTGGCTTCCGAAATCCAAAATGGGTTGAAGGAGAACTACTCCAACTCAATGCCAAGGGTATTGGACCGTATGCCAAAGGTGCAGATCTTGGTTTTCTTTACATTGTCCCAGAGCAAAGTTTCCTGGTATTGTTCAATCGCCTGAAACTACCAGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0000304 GO:0005575 GO:0005622 GO:0005623 GO:0006950 GO:0006979 GO:0007154 GO:0007584 GO:0008150 GO:0008219 GO:0009579 GO:0009605 GO:0009987 GO:0009991 GO:0010035 GO:0010343 GO:0012501 GO:0016020 GO:0031667 GO:0031668 GO:0031669 GO:0031670 GO:0033554 GO:0034357 GO:0034599 GO:0034614 GO:0035690 GO:0036473 GO:0042221 GO:0042493 GO:0042651 GO:0044424 GO:0044436 GO:0044464 GO:0050896 GO:0051716 GO:0070887 GO:0071452 GO:0071496 GO:0097468 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3506 UVR

Protein Analysis

652

Amino Acids

71.92

Weight (kDa)

5.29

Isoelectric Point (pI)

39.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cyclin_D1_bind	PF12014	493 - 650	2.4e-31	Cyclin D1 binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014111)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27510
fragaria_vesca	FvH4_5g05220
malus_domestica	MD06G1175500.v1.1 MD14G1182300.v1.1
prunus_persica	Prupe.5G174800_v2.0.a1
pyrus_communis	pycom06g15620 pycom14g15120
rosa_chinensis	RchiOBHm_Chr7g0193691
rosa_laevigata	RLG00000004251
rosa_multiflora	Rmu_sc0001436.1_g000008
rosa_roxburghii	Rroxscaffold_3G00261900
rosa_rugosa	Rorug07G0011400
rosa_samantha	Rh7AG138100 Rh7BG138300 Rh7CG142000 Rh7DG139400
rosa_wichuraiana	Rw7G011760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	694
Acc36I	ACCTGC	2 cut(s)	694, 1210
AccBSI	CCGCTC	1 cut(s)	1310
AccI	GTMKAC	1 cut(s)	1198
AccII	CGCG	1 cut(s)	26
AccIII	TCCGGA	1 cut(s)	1747
AciI	CCGC	6 cut(s)	5, 26, 29, 283, 1308, 1447
AclWI	GGATC	5 cut(s)	548, 1490, 1502, 1509, 1674
AcoI	YGGCCR	3 cut(s)	9, 1305, 1684
AcsI	RAATTY	6 cut(s)	107, 663, 898, 1033, 1065, 1799
AcuI	CTGAAG	3 cut(s)	801, 926, 1059
AfaI	GTAC	4 cut(s)	244, 713, 1158, 1466
AfeI	AGCGCT	1 cut(s)	470
AfiI	CCNNNNNNNGG	5 cut(s)	173, 590, 764, 1497, 1517
AgsI	TTSAA	8 cut(s)	112, 302, 338, 448, 486, 1517, 1829, 1936
AhdI	GACNNNNNGTC	1 cut(s)	615
AhlI	ACTAGT	1 cut(s)	230
AjnI	CCWGG	4 cut(s)	583, 919, 1686, 1923
AluBI	AGCT	8 cut(s)	315, 377, 407, 994, 1319, 1336, 1381, 1657
AluI	AGCT	8 cut(s)	315, 377, 407, 994, 1319, 1336, 1381, 1657
Alw21I	GWGCWC	1 cut(s)	330
Alw26I	GTCTC	3 cut(s)	86, 444, 1333
AlwI	GGATC	5 cut(s)	548, 1490, 1502, 1509, 1674
Aor13HI	TCCGGA	1 cut(s)	1747
Aor51HI	AGCGCT	1 cut(s)	470
AoxI	GGCC	4 cut(s)	9, 1305, 1684, 1780
ApeKI	GCWGC	4 cut(s)	38, 135, 1240, 1316
ApoI	RAATTY	6 cut(s)	107, 663, 898, 1033, 1065, 1799
ArsI	GACNNNNNNTTYG	2 cut(s)	654, 686
AspLEI	GCGC	1 cut(s)	471
AspS9I	GGNCC	4 cut(s)	62, 1541, 1780, 1865
AsuC2I	CCSGG	3 cut(s)	47, 247, 1251
AsuHPI	GGTGA	2 cut(s)	1112, 1702
AsuII	TTCGAA	2 cut(s)	660, 1635
AvaII	GGWCC	3 cut(s)	62, 1541, 1865
BaeGI	GKGCMC	1 cut(s)	1587
BalI	TGGCCA	2 cut(s)	11, 1686
BarI	GAAGNNNNNNTAC	4 cut(s)	235, 267, 1821, 1853
BauI	CACGAG	1 cut(s)	1494
BbsI	GAAGAC	2 cut(s)	243, 571
Bbv12I	GWGCWC	1 cut(s)	330
BbvI	GCAGC	4 cut(s)	50, 122, 1227, 1328
BccI	CCATC	4 cut(s)	110, 680, 757, 1351
BciT130I	CCWGG	4 cut(s)	585, 921, 1688, 1925
BciVI	GTATCC	2 cut(s)	1162, 1755
BcnI	CCSGG	3 cut(s)	47, 247, 1251
BcoDI	GTCTC	3 cut(s)	86, 444, 1333
BcuI	ACTAGT	1 cut(s)	230
BfaI	CTAG	5 cut(s)	231, 341, 1088, 1262, 1275
BfmI	CTRYAG	1 cut(s)	798
BfoI	RGCGCY	1 cut(s)	472
BfuAI	ACCTGC	2 cut(s)	694, 1210
BfuI	GTATCC	2 cut(s)	1162, 1755
BglII	AGATCT	1 cut(s)	1885
BisI	GCNGC	7 cut(s)	27, 39, 136, 283, 1241, 1308, 1317
BlsI	GCNGC	7 cut(s)	28, 40, 137, 284, 1242, 1309, 1318
Bme1390I	CCNGG	7 cut(s)	47, 247, 585, 921, 1251, 1688, 1925
Bme18I	GGWCC	3 cut(s)	62, 1541, 1865
BmeRI	GACNNNNNGTC	1 cut(s)	615
BmgT120I	GGNCC	4 cut(s)	62, 1541, 1780, 1865
BmiI	GGNNCC	3 cut(s)	64, 272, 281
BmrFI	CCNGG	7 cut(s)	47, 247, 585, 921, 1251, 1688, 1925
BmrI	ACTGGG	1 cut(s)	1671
BmsI	GCATC	5 cut(s)	337, 469, 647, 987, 1298
BmuI	ACTGGG	1 cut(s)	1671
BpiI	GAAGAC	2 cut(s)	243, 571
BplI	GAGNNNNNCTC	2 cut(s)	1824, 1856
Bpu10I	CCTNAGC	1 cut(s)	957
Bpu14I	TTCGAA	2 cut(s)	660, 1635
BpuEI	CTTGAG	2 cut(s)	314, 1296
BpuMI	CCSGG	3 cut(s)	47, 247, 1251
BsaBI	GATNNNNATC	1 cut(s)	1506
BsaI	GGTCTC	1 cut(s)	86
BsaJI	CCNNGG	7 cut(s)	620, 1179, 1250, 1356, 1735, 1783, 1854
BsaWI	WCCGGW	2 cut(s)	77, 1747
BsaXI	ACNNNNNCTCC	2 cut(s)	1705, 1735
Bsc4I	CCNNNNNNNGG	5 cut(s)	173, 590, 764, 1497, 1517
Bse1I	ACTGG	4 cut(s)	274, 519, 1592, 1666
Bse8I	GATNNNNATC	1 cut(s)	1506
BseAI	TCCGGA	1 cut(s)	1747
BseBI	CCWGG	4 cut(s)	585, 921, 1688, 1925
BseDI	CCNNGG	7 cut(s)	620, 1179, 1250, 1356, 1735, 1783, 1854
BseGI	GGATG	4 cut(s)	749, 1189, 1289, 1756
BseJI	GATNNNNATC	1 cut(s)	1506
BseLI	CCNNNNNNNGG	5 cut(s)	173, 590, 764, 1497, 1517
BseMII	CTCAG	7 cut(s)	285, 455, 864, 1323, 1452, 1545, 1582
BseNI	ACTGG	4 cut(s)	274, 519, 1592, 1666
BseRI	GAGGAG	3 cut(s)	476, 479, 890
BseSI	GKGCMC	1 cut(s)	1587
BseXI	GCAGC	4 cut(s)	50, 122, 1227, 1328
BsgI	GTGCAG	1 cut(s)	1902
Bsh1236I	CGCG	1 cut(s)	26
BshFI	GGCC	4 cut(s)	11, 1307, 1686, 1782
BsiHKAI	GWGCWC	1 cut(s)	330
BsiSI	CCGG	5 cut(s)	47, 78, 246, 1250, 1748
BslFI	GGGAC	3 cut(s)	636, 703, 1892
BslI	CCNNNNNNNGG	5 cut(s)	173, 590, 764, 1497, 1517
BsmAI	GTCTC	3 cut(s)	86, 444, 1333
BsmFI	GGGAC	3 cut(s)	636, 703, 1892
BsmI	GAATGC	1 cut(s)	796
BsnI	GGCC	4 cut(s)	11, 1307, 1686, 1782
Bso31I	GGTCTC	1 cut(s)	86
Bsp119I	TTCGAA	2 cut(s)	660, 1635
Bsp1286I	GDGCHC	2 cut(s)	330, 1587
Bsp13I	TCCGGA	1 cut(s)	1747
Bsp1407I	TGTACA	1 cut(s)	1156
Bsp143I	GATC	8 cut(s)	432, 553, 1264, 1482, 1501, 1507, 1666, 1885
BspACI	CCGC	6 cut(s)	5, 26, 29, 283, 1308, 1447
BspANI	GGCC	4 cut(s)	11, 1307, 1686, 1782
BspCNI	CTCAG	7 cut(s)	286, 454, 865, 1324, 1453, 1546, 1581
BspEI	TCCGGA	1 cut(s)	1747
BspFNI	CGCG	1 cut(s)	26
BspHI	TCATGA	1 cut(s)	1267
BspLI	GGNNCC	3 cut(s)	64, 272, 281
BspMI	ACCTGC	2 cut(s)	694, 1210
BspPI	GGATC	5 cut(s)	548, 1490, 1502, 1509, 1674
BspT104I	TTCGAA	2 cut(s)	660, 1635
BspTNI	GGTCTC	1 cut(s)	86
BsrBI	CCGCTC	1 cut(s)	1310
BsrGI	TGTACA	1 cut(s)	1156
BsrI	ACTGG	4 cut(s)	274, 519, 1592, 1666
BssECI	CCNNGG	7 cut(s)	620, 1179, 1250, 1356, 1735, 1783, 1854
BssMI	GATC	8 cut(s)	432, 553, 1264, 1482, 1501, 1507, 1666, 1885
BssSI	CACGAG	1 cut(s)	1494
BssT1I	CCWWGG	5 cut(s)	620, 1179, 1356, 1783, 1854
Bst2BI	CACGAG	1 cut(s)	1494
Bst2UI	CCWGG	4 cut(s)	585, 921, 1688, 1925
Bst4CI	ACNGT	8 cut(s)	198, 242, 424, 617, 742, 799, 1736, 1869
Bst6I	CTCTTC	1 cut(s)	837
BstAUI	TGTACA	1 cut(s)	1156
BstBI	TTCGAA	2 cut(s)	660, 1635
BstC8I	GCNNGC	1 cut(s)	1684
BstDEI	CTNAG	9 cut(s)	294, 429, 441, 873, 957, 1332, 1461, 1554, 1568
BstDSI	CCRYGG	1 cut(s)	1735
BstEII	GGTNACC	1 cut(s)	1393
BstENI	CCTNNNNNAGG	1 cut(s)	762
BstF5I	GGATG	4 cut(s)	749, 1189, 1289, 1756
BstFNI	CGCG	1 cut(s)	26
BstH2I	RGCGCY	1 cut(s)	472
BstHHI	GCGC	1 cut(s)	471
BstKTI	GATC	8 cut(s)	435, 556, 1267, 1485, 1504, 1510, 1669, 1888
BstMAI	GTCTC	3 cut(s)	86, 444, 1333
BstMBI	GATC	8 cut(s)	432, 553, 1264, 1482, 1501, 1507, 1666, 1885
BstMWI	GCNNNNNNNGC	5 cut(s)	35, 1313, 1316, 1570, 1880
BstNI	CCWGG	4 cut(s)	585, 921, 1688, 1925
BstPI	GGTNACC	1 cut(s)	1393
BstSCI	CCNGG	7 cut(s)	45, 245, 583, 919, 1249, 1686, 1923
BstSFI	CTRYAG	1 cut(s)	798
BstSLI	GKGCMC	1 cut(s)	1587
BstUI	CGCG	1 cut(s)	26
BstV1I	GCAGC	4 cut(s)	50, 122, 1227, 1328
BstV2I	GAAGAC	2 cut(s)	243, 571
BstX2I	RGATCY	3 cut(s)	1501, 1666, 1885
BstYI	RGATCY	3 cut(s)	1501, 1666, 1885
BsuI	GTATCC	2 cut(s)	1162, 1755
BsuRI	GGCC	4 cut(s)	11, 1307, 1686, 1782
BtgI	CCRYGG	1 cut(s)	1735
BtgZI	GCGATG	1 cut(s)	1635
BtsCI	GGATG	4 cut(s)	749, 1189, 1289, 1756
BtsI	GCAGTG	2 cut(s)	514, 1656
BtsIMutI	CAGTG	6 cut(s)	281, 514, 738, 1551, 1585, 1656
BveI	ACCTGC	2 cut(s)	694, 1210
Cac8I	GCNNGC	1 cut(s)	1684
CciI	TCATGA	1 cut(s)	1267
CfoI	GCGC	1 cut(s)	471
Cfr13I	GGNCC	4 cut(s)	62, 1541, 1780, 1865
Csp6I	GTAC	4 cut(s)	243, 712, 1157, 1465
CviAII	CATG	4 cut(s)	436, 476, 1132, 1268
CviQI	GTAC	4 cut(s)	243, 712, 1157, 1465
DdeI	CTNAG	9 cut(s)	294, 429, 441, 873, 957, 1332, 1461, 1554, 1568
DpnI	GATC	8 cut(s)	434, 555, 1266, 1484, 1503, 1509, 1668, 1887
DpnII	GATC	8 cut(s)	432, 553, 1264, 1482, 1501, 1507, 1666, 1885
DriI	GACNNNNNGTC	1 cut(s)	615
EaeI	YGGCCR	3 cut(s)	9, 1305, 1684
Eam1104I	CTCTTC	1 cut(s)	837
Eam1105I	GACNNNNNGTC	1 cut(s)	615
EarI	CTCTTC	1 cut(s)	837
Eco130I	CCWWGG	5 cut(s)	620, 1179, 1356, 1783, 1854
Eco31I	GGTCTC	1 cut(s)	86
Eco47I	GGWCC	3 cut(s)	62, 1541, 1865
Eco47III	AGCGCT	1 cut(s)	470
Eco57I	CTGAAG	3 cut(s)	801, 926, 1059
Eco91I	GGTNACC	1 cut(s)	1393
EcoNI	CCTNNNNNAGG	1 cut(s)	762
EcoO65I	GGTNACC	1 cut(s)	1393
EcoRII	CCWGG	4 cut(s)	583, 919, 1686, 1923
EcoT14I	CCWWGG	5 cut(s)	620, 1179, 1356, 1783, 1854
ErhI	CCWWGG	5 cut(s)	620, 1179, 1356, 1783, 1854
FaeI	CATG	4 cut(s)	439, 479, 1135, 1271
FalI	AAGNNNNNCTT	2 cut(s)	350, 382
FaqI	GGGAC	3 cut(s)	636, 703, 1892
FatI	CATG	4 cut(s)	435, 475, 1131, 1267
FauI	CCCGC	1 cut(s)	22
FauNDI	CATATG	1 cut(s)	694
FblI	GTMKAC	1 cut(s)	1198
Fnu4HI	GCNGC	7 cut(s)	27, 39, 136, 283, 1241, 1308, 1317
FokI	GGATG	4 cut(s)	736, 1196, 1276, 1763
Fsp4HI	GCNGC	7 cut(s)	27, 39, 136, 283, 1241, 1308, 1317
FspBI	CTAG	5 cut(s)	231, 341, 1088, 1262, 1275
GlaI	GCGC	1 cut(s)	470
GluI	GCNGC	7 cut(s)	27, 39, 136, 283, 1241, 1308, 1317
HaeII	RGCGCY	1 cut(s)	472
HaeIII	GGCC	4 cut(s)	11, 1307, 1686, 1782
HapII	CCGG	5 cut(s)	47, 78, 246, 1250, 1748
HhaI	GCGC	1 cut(s)	471
Hin1II	CATG	4 cut(s)	439, 479, 1135, 1271
Hin6I	GCGC	1 cut(s)	469
HinP1I	GCGC	1 cut(s)	469
HincII	GTYRAC	2 cut(s)	238, 1199
HindII	GTYRAC	2 cut(s)	238, 1199
HindIII	AAGCTT	1 cut(s)	1379
HinfI	GANTC	7 cut(s)	545, 567, 649, 1022, 1229, 1613, 1720
HpaII	CCGG	5 cut(s)	47, 78, 246, 1250, 1748
HphI	GGTGA	2 cut(s)	1112, 1702
Hpy166II	GTNNAC	7 cut(s)	238, 497, 512, 712, 988, 1199, 1467
Hpy188III	TCNNGA	5 cut(s)	779, 1268, 1494, 1505, 1748
Hpy8I	GTNNAC	7 cut(s)	238, 497, 512, 712, 988, 1199, 1467
Hpy99I	CGWCG	1 cut(s)	1200
HpyAV	CCTTC	6 cut(s)	76, 149, 177, 1511, 1782, 1823
HpyCH4III	ACNGT	8 cut(s)	198, 242, 424, 617, 742, 799, 1736, 1869
HpyF10VI	GCNNNNNNNGC	5 cut(s)	35, 1313, 1316, 1570, 1880
HpyF3I	CTNAG	9 cut(s)	294, 429, 441, 873, 957, 1332, 1461, 1554, 1568
Hsp92II	CATG	4 cut(s)	439, 479, 1135, 1271
HspAI	GCGC	1 cut(s)	469
Kpn2I	TCCGGA	1 cut(s)	1747
Kzo9I	GATC	8 cut(s)	432, 553, 1264, 1482, 1501, 1507, 1666, 1885
LmnI	GCTCC	4 cut(s)	80, 279, 466, 866
Lsp1109I	GCAGC	4 cut(s)	50, 122, 1227, 1328
LweI	GCATC	5 cut(s)	337, 469, 647, 987, 1298
MaeI	CTAG	5 cut(s)	231, 341, 1088, 1262, 1275
MaeIII	GTNAC	5 cut(s)	631, 1081, 1393, 1690, 1772
MalI	GATC	8 cut(s)	434, 555, 1266, 1484, 1503, 1509, 1668, 1887
MbiI	CCGCTC	1 cut(s)	1310
MboI	GATC	8 cut(s)	432, 553, 1264, 1482, 1501, 1507, 1666, 1885
MfeI	CAATTG	2 cut(s)	351, 456
MflI	RGATCY	3 cut(s)	1501, 1666, 1885
MhlI	GDGCHC	2 cut(s)	330, 1587
MlsI	TGGCCA	2 cut(s)	11, 1686
MluNI	TGGCCA	2 cut(s)	11, 1686
MlyI	GAGTC	3 cut(s)	561, 658, 1729
MmeI	TCCRAC	3 cut(s)	1398, 1755, 1867
Mox20I	TGGCCA	2 cut(s)	11, 1686
MroI	TCCGGA	1 cut(s)	1747
MscI	TGGCCA	2 cut(s)	11, 1686
MseI	TTAA	4 cut(s)	675, 855, 933, 1476
MslI	CAYNNNNRTG	1 cut(s)	1590
Msp20I	TGGCCA	2 cut(s)	11, 1686
MspA1I	CMGCKG	1 cut(s)	994
MspI	CCGG	5 cut(s)	47, 78, 246, 1250, 1748
MspR9I	CCNGG	7 cut(s)	47, 247, 585, 921, 1251, 1688, 1925
MunI	CAATTG	2 cut(s)	351, 456
Mva1269I	GAATGC	1 cut(s)	796
MvaI	CCWGG	4 cut(s)	585, 921, 1688, 1925
MvnI	CGCG	1 cut(s)	26
MwoI	GCNNNNNNNGC	5 cut(s)	35, 1313, 1316, 1570, 1880
NciI	CCSGG	3 cut(s)	47, 247, 1251
NdeI	CATATG	1 cut(s)	694
NdeII	GATC	8 cut(s)	432, 553, 1264, 1482, 1501, 1507, 1666, 1885
NlaIII	CATG	4 cut(s)	439, 479, 1135, 1271
NlaIV	GGNNCC	3 cut(s)	64, 272, 281
NmeAIII	GCCGAG	1 cut(s)	111
NmuCI	GTSAC	2 cut(s)	1081, 1690
NspV	TTCGAA	2 cut(s)	660, 1635
PagI	TCATGA	1 cut(s)	1267
PaqCI	CACCTGC	1 cut(s)	694
PcsI	WCGNNNNNNNCGW	2 cut(s)	176, 1617
PctI	GAATGC	1 cut(s)	796
PfeI	GAWTC	4 cut(s)	545, 1022, 1229, 1613
PfoI	TCCNGGA	1 cut(s)	919
PkrI	GCNGC	7 cut(s)	28, 40, 137, 284, 1242, 1309, 1318
PleI	GAGTC	3 cut(s)	561, 657, 1728
PpsI	GAGTC	3 cut(s)	561, 657, 1728
Psp6I	CCWGG	4 cut(s)	583, 919, 1686, 1923
PspEI	GGTNACC	1 cut(s)	1393
PspGI	CCWGG	4 cut(s)	583, 919, 1686, 1923
PspN4I	GGNNCC	3 cut(s)	64, 272, 281
PspPI	GGNCC	4 cut(s)	62, 1541, 1780, 1865
PsrI	GAACNNNNNNTAC	2 cut(s)	792, 824
PsuI	RGATCY	3 cut(s)	1501, 1666, 1885
PvuII	CAGCTG	1 cut(s)	994
RsaI	GTAC	4 cut(s)	244, 713, 1158, 1466
RsaNI	GTAC	4 cut(s)	243, 712, 1157, 1465
RseI	CAYNNNNRTG	1 cut(s)	1590
SalI	GTCGAC	1 cut(s)	1197
SaqAI	TTAA	4 cut(s)	675, 855, 933, 1476
SatI	GCNGC	7 cut(s)	27, 39, 136, 283, 1241, 1308, 1317
Sau3AI	GATC	8 cut(s)	432, 553, 1264, 1482, 1501, 1507, 1666, 1885
Sau96I	GGNCC	4 cut(s)	62, 1541, 1780, 1865
SchI	GAGTC	3 cut(s)	561, 658, 1729
ScrFI	CCNGG	7 cut(s)	47, 247, 585, 921, 1251, 1688, 1925
SduI	GDGCHC	2 cut(s)	330, 1587
SfaNI	GCATC	5 cut(s)	337, 469, 647, 987, 1298
SfcI	CTRYAG	1 cut(s)	798
SfuI	TTCGAA	2 cut(s)	660, 1635
SinI	GGWCC	3 cut(s)	62, 1541, 1865
SmiMI	CAYNNNNRTG	1 cut(s)	1590
SmlI	CTYRAG	2 cut(s)	329, 1311
SmoI	CTYRAG	2 cut(s)	329, 1311
SpeI	ACTAGT	1 cut(s)	230
SsiI	CCGC	6 cut(s)	5, 26, 29, 283, 1308, 1447
SspI	AATATT	1 cut(s)	859
SspMI	CTAG	5 cut(s)	231, 341, 1088, 1262, 1275
StyD4I	CCNGG	7 cut(s)	45, 245, 583, 919, 1249, 1686, 1923
StyI	CCWWGG	5 cut(s)	620, 1179, 1356, 1783, 1854
TaaI	ACNGT	8 cut(s)	198, 242, 424, 617, 742, 799, 1736, 1869
TaqI	TCGA	4 cut(s)	179, 660, 1198, 1635
TatI	WGTACW	3 cut(s)	711, 1156, 1464
TauI	GCSGC	3 cut(s)	29, 285, 1310
TfiI	GAWTC	4 cut(s)	545, 1022, 1229, 1613
Tru1I	TTAA	4 cut(s)	675, 855, 933, 1476
Tru9I	TTAA	4 cut(s)	675, 855, 933, 1476
TscAI	CASTG	6 cut(s)	281, 514, 745, 1558, 1592, 1656
TseFI	GTSAC	2 cut(s)	1081, 1690
TseI	GCWGC	4 cut(s)	38, 135, 1240, 1316
Tsp45I	GTSAC	2 cut(s)	1081, 1690
TspDTI	ATGAA	8 cut(s)	395, 834, 956, 1044, 1059, 1131, 1148, 1767
TspGWI	ACGGA	1 cut(s)	142
TspRI	CASTG	6 cut(s)	281, 514, 745, 1558, 1592, 1656
VpaK11BI	GGWCC	3 cut(s)	62, 1541, 1865
XagI	CCTNNNNNAGG	1 cut(s)	762
XapI	RAATTY	6 cut(s)	107, 663, 898, 1033, 1065, 1799
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1300
XmiI	GTMKAC	1 cut(s)	1198
XspI	CTAG	5 cut(s)	231, 341, 1088, 1262, 1275

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.