Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0014111

Physical Location & Seq

Genomic Coordinates Forward (+)

56043861 .. 56048325

Gene Structure 4465 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00261900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1848 bp

ATGGCGGTGGCCAATTCATGGGTCGCGGCGGGTCAGGCGGCAATCCCGGTAGCCCAATTCGGACCCGTCCCTTGCTCCGGTCTCCTATCCAATAAGTCCATGAAATTCAACCACGCCAATAAAAATCTCGGCTGCCTTCTCACTTTCTCCGTCCAATCCAAGCCTTCATCTGGTTCGAGTAGGAATAGAAAACTGTGTTGCAGTTGTGGTGGCGAGAATAACAGCACTAGTGTTGACTGTACCGGGTCTTCTTTGGAATGGGATTGGAACCAGTGGAGCCGCCATTTTTCTGAGATTGAACAAGCAGAGAGCTTTGCCTCTGTGCTCAAGTTTCAACTAGAAGATGCAATTGAGAAGCAAGACTTCCAAGAAGCTATGAAACTGAAAATGGCTATTGCAGAAGCTACATCAAAGGACACGGTTGCTAAGATCATGTCTCAGTTGAAGATTGCAATTGAGGAGGAGCGCTACCATGATGCTTCAAAATTGTGTAAACACACAGGCAGTGGACTGGTAGGCTGGTGGGTTGGCTACCCAAAAGATTCAGATGATCCCTTTGGAAGACTCATACGAATAACTCCTGGTGTTGGCAGATTTGTTGGCAGGACTTACAGTCCAAGGCAGTTGGTTACAGCATCTCCGGGGAGTCCCCTATTCGAAATTTTTGTCGTTAAAAATGCAGATGGGACATATGTTATGCAGAAAAATGAAGATAAGGTAGAGAGTAGCGAAGAGAAAGGACTTAATATTGAGGGAGCAACTGAGGAGGGTATAAAAAGTGTGATAAATTTTCTGAAGAAAAAACTTCCAGGACTGAAAGTTAAAGTTATGAATGTTGATGTTGCTAAGGAAGTAATGGAGGACGACAATTCGGTAAACCAGCTGATGCAAGAAAATAGTGACAACTCTGAATCTGATGAAAATTCTGAAGATGAAGTTGATACTTTGGACGAAATTCAGCCTGATGAGGTCACTCTAGGGGAGAGTGGTGATACCATAGATGATGACAAAGATTTGGACATGAAACTTTTTATTGGGGGAATTGTACATAATGAGGATACTGCCACCAAGGATGAGTATGTTCGTCGACCTGCTGAAATCAAAGATATGGAGAGAGAATCTTTTGTGCTGCATATTCCGGGGAGAAGCCTAGATCATGATACTAGAGAAAGTAAAGCATCCAAGATAAAAGTGGCAGCTCAAGCAGCTAAAAGTGTCTCTGAGCTTATGCCATCTGATGTTGCCAAGGCATTTTGGAACTCCGACAAGCTTTCTCCAAAGGTTACCAAAAATATGCGTGAAATAGTGAAACTTGCTGTTAGTCAAGCACAGAAGCGGAGTAGATTATCTGAGTACACAACATTTAATCGGATCAGCACCTCACGAGGGGATCTTGATCCATTTGAAGGTCTGTATGTTGGTGCATTTGGTCCTTATGGCACTGAGGTAGTGCAACTCAGGCGTAAGTATGGGCACTGGAATGGTTCAGATGACAAAGACGATTCTGGCGATGTGGAGTTCTTCGAATATGTTGAGGCAGTGAAGCTAACTGGGGATCTAAATGTTCCGGCTGGCCAGGTGACATTTCGTGCTAAAATTGGGAGAGGGAGTCGTCTTTCCAACCGTGGAATGTATCCGGATGAATTAGGAGTGGTTGCAAGTTACAAGGGCCAAGGAAGGATAGCAGAATTTGGCTTCCGAAATCCAAAATGGGTTGAAGGAGAACTACTCCAACTCAATGCCAAGGGTATTGGACCTTATGCCAAAGGTGCAGATCTTGGTTTTCTTTACATTGTCCCAGAGCAAAGTTTCCTGGTATTGTTCAATCGCCTGAAACTACCAGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0000304 GO:0005575 GO:0005622 GO:0005623 GO:0006950 GO:0006979 GO:0007154 GO:0007584 GO:0008150 GO:0008219 GO:0009579 GO:0009605 GO:0009987 GO:0009991 GO:0010035 GO:0010343 GO:0012501 GO:0016020 GO:0031667 GO:0031668 GO:0031669 GO:0031670 GO:0033554 GO:0034357 GO:0034599 GO:0034614 GO:0035690 GO:0036473 GO:0042221 GO:0042493 GO:0042651 GO:0044424 GO:0044436 GO:0044464 GO:0050896 GO:0051716 GO:0070887 GO:0071452 GO:0071496 GO:0097468 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3506 UVR

Protein Analysis

615

Amino Acids

68.08

Weight (kDa)

5.27

Isoelectric Point (pI)

38.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cyclin_D1_bind	PF12014	456 - 613	2.2e-31	Cyclin D1 binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014111)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27510
fragaria_vesca	FvH4_5g05220
malus_domestica	MD06G1175500.v1.1 MD14G1182300.v1.1
prunus_persica	Prupe.5G174800_v2.0.a1
pyrus_communis	pycom06g15620 pycom14g15120
rosa_chinensis	RchiOBHm_Chr7g0193691
rosa_laevigata	RLG00000004251
rosa_multiflora	Rmu_sc0001436.1_g000008
rosa_roxburghii	Rroxscaffold_3G00261900
rosa_rugosa	Rorug07G0011400
rosa_samantha	Rh7AG138100 Rh7BG138300 Rh7CG142000 Rh7DG139400
rosa_wichuraiana	Rw7G011760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1099
AccB7I	CCANNNNNTGG	1 cut(s)	18
AccI	GTMKAC	1 cut(s)	1087
AccII	CGCG	1 cut(s)	26
AccIII	TCCGGA	1 cut(s)	1636
AciI	CCGC	6 cut(s)	5, 26, 29, 38, 280, 1336
AclWI	GGATC	5 cut(s)	545, 1379, 1391, 1398, 1563
AcoI	YGGCCR	2 cut(s)	9, 1573
AcsI	RAATTY	6 cut(s)	104, 660, 787, 922, 954, 1688
AcuI	CTGAAG	2 cut(s)	815, 948
AfaI	GTAC	3 cut(s)	241, 1047, 1355
AfeI	AGCGCT	1 cut(s)	467
AfiI	CCNNNNNNNGG	6 cut(s)	18, 77, 170, 587, 1386, 1406
AgsI	TTSAA	8 cut(s)	109, 299, 335, 445, 483, 1406, 1718, 1825
AhdI	GACNNNNNGTC	1 cut(s)	612
AhlI	ACTAGT	1 cut(s)	227
AjnI	CCWGG	4 cut(s)	580, 808, 1575, 1812
AluBI	AGCT	9 cut(s)	312, 374, 404, 883, 1199, 1208, 1225, 1270, 1546
AluI	AGCT	9 cut(s)	312, 374, 404, 883, 1199, 1208, 1225, 1270, 1546
Alw21I	GWGCWC	1 cut(s)	327
Alw26I	GTCTC	3 cut(s)	86, 441, 1222
AlwI	GGATC	5 cut(s)	545, 1379, 1391, 1398, 1563
Aor13HI	TCCGGA	1 cut(s)	1636
Aor51HI	AGCGCT	1 cut(s)	467
AoxI	GGCC	3 cut(s)	9, 1573, 1669
ApeKI	GCWGC	4 cut(s)	132, 1129, 1196, 1205
ApoI	RAATTY	6 cut(s)	104, 660, 787, 922, 954, 1688
ArsI	GACNNNNNNTTYG	2 cut(s)	651, 683
AspLEI	GCGC	1 cut(s)	468
AspS9I	GGNCC	4 cut(s)	62, 1430, 1669, 1754
AsuC2I	CCSGG	4 cut(s)	47, 244, 642, 1140
AsuHPI	GGTGA	2 cut(s)	1001, 1591
AsuII	TTCGAA	2 cut(s)	657, 1524
AvaII	GGWCC	3 cut(s)	62, 1430, 1754
BaeGI	GKGCMC	1 cut(s)	1476
BalI	TGGCCA	2 cut(s)	11, 1575
BarI	GAAGNNNNNNTAC	4 cut(s)	232, 264, 1710, 1742
BauI	CACGAG	1 cut(s)	1383
BbsI	GAAGAC	2 cut(s)	240, 568
Bbv12I	GWGCWC	1 cut(s)	327
BbvI	GCAGC	4 cut(s)	119, 1116, 1208, 1217
BccI	CCATC	2 cut(s)	677, 1240
BciT130I	CCWGG	4 cut(s)	582, 810, 1577, 1814
BciVI	GTATCC	2 cut(s)	1051, 1644
BcnI	CCSGG	4 cut(s)	47, 244, 642, 1140
BcoDI	GTCTC	3 cut(s)	86, 441, 1222
BcuI	ACTAGT	1 cut(s)	227
BfaI	CTAG	5 cut(s)	228, 338, 977, 1151, 1164
BfoI	RGCGCY	1 cut(s)	469
BfuAI	ACCTGC	1 cut(s)	1099
BfuI	GTATCC	2 cut(s)	1051, 1644
BglII	AGATCT	1 cut(s)	1774
BisI	GCNGC	7 cut(s)	27, 39, 133, 280, 1130, 1197, 1206
BlsI	GCNGC	7 cut(s)	28, 40, 134, 281, 1131, 1198, 1207
Bme1390I	CCNGG	8 cut(s)	47, 244, 582, 642, 810, 1140, 1577, 1814
Bme18I	GGWCC	3 cut(s)	62, 1430, 1754
BmeRI	GACNNNNNGTC	1 cut(s)	612
BmgT120I	GGNCC	4 cut(s)	62, 1430, 1669, 1754
BmiI	GGNNCC	3 cut(s)	64, 269, 278
BmrFI	CCNGG	8 cut(s)	47, 244, 582, 642, 810, 1140, 1577, 1814
BmrI	ACTGGG	1 cut(s)	1560
BmsI	GCATC	5 cut(s)	334, 466, 644, 876, 1187
BmuI	ACTGGG	1 cut(s)	1560
BpiI	GAAGAC	2 cut(s)	240, 568
BplI	GAGNNNNNCTC	2 cut(s)	1713, 1745
Bpu10I	CCTNAGC	1 cut(s)	846
Bpu14I	TTCGAA	2 cut(s)	657, 1524
BpuEI	CTTGAG	2 cut(s)	311, 1185
BpuMI	CCSGG	4 cut(s)	47, 244, 642, 1140
BsaBI	GATNNNNATC	1 cut(s)	1395
BsaI	GGTCTC	1 cut(s)	86
BsaJI	CCNNGG	8 cut(s)	617, 641, 1068, 1139, 1245, 1624, 1672, 1743
BsaWI	WCCGGW	2 cut(s)	77, 1636
BsaXI	ACNNNNNCTCC	4 cut(s)	622, 652, 1594, 1624
Bsc4I	CCNNNNNNNGG	6 cut(s)	18, 77, 170, 587, 1386, 1406
Bse1I	ACTGG	4 cut(s)	271, 516, 1481, 1555
Bse8I	GATNNNNATC	1 cut(s)	1395
BseAI	TCCGGA	1 cut(s)	1636
BseBI	CCWGG	4 cut(s)	582, 810, 1577, 1814
BseDI	CCNNGG	8 cut(s)	617, 641, 1068, 1139, 1245, 1624, 1672, 1743
BseGI	GGATG	3 cut(s)	1078, 1178, 1645
BseJI	GATNNNNATC	1 cut(s)	1395
BseLI	CCNNNNNNNGG	6 cut(s)	18, 77, 170, 587, 1386, 1406
BseMII	CTCAG	7 cut(s)	282, 452, 753, 1212, 1341, 1434, 1471
BseNI	ACTGG	4 cut(s)	271, 516, 1481, 1555
BseRI	GAGGAG	3 cut(s)	473, 476, 779
BseSI	GKGCMC	1 cut(s)	1476
BseXI	GCAGC	4 cut(s)	119, 1116, 1208, 1217
BsgI	GTGCAG	1 cut(s)	1791
Bsh1236I	CGCG	1 cut(s)	26
BshFI	GGCC	3 cut(s)	11, 1575, 1671
BsiHKAI	GWGCWC	1 cut(s)	327
BsiSI	CCGG	7 cut(s)	47, 78, 243, 641, 1139, 1568, 1637
BslFI	GGGAC	4 cut(s)	53, 633, 700, 1781
BslI	CCNNNNNNNGG	6 cut(s)	18, 77, 170, 587, 1386, 1406
BsmAI	GTCTC	3 cut(s)	86, 441, 1222
BsmFI	GGGAC	4 cut(s)	53, 633, 700, 1781
BsnI	GGCC	3 cut(s)	11, 1575, 1671
Bso31I	GGTCTC	1 cut(s)	86
Bsp119I	TTCGAA	2 cut(s)	657, 1524
Bsp1286I	GDGCHC	2 cut(s)	327, 1476
Bsp13I	TCCGGA	1 cut(s)	1636
Bsp1407I	TGTACA	1 cut(s)	1045
Bsp143I	GATC	8 cut(s)	429, 550, 1153, 1371, 1390, 1396, 1555, 1774
BspACI	CCGC	6 cut(s)	5, 26, 29, 38, 280, 1336
BspANI	GGCC	3 cut(s)	11, 1575, 1671
BspCNI	CTCAG	7 cut(s)	283, 451, 754, 1213, 1342, 1435, 1470
BspEI	TCCGGA	1 cut(s)	1636
BspFNI	CGCG	1 cut(s)	26
BspHI	TCATGA	1 cut(s)	1156
BspLI	GGNNCC	3 cut(s)	64, 269, 278
BspMI	ACCTGC	1 cut(s)	1099
BspPI	GGATC	5 cut(s)	545, 1379, 1391, 1398, 1563
BspT104I	TTCGAA	2 cut(s)	657, 1524
BspTNI	GGTCTC	1 cut(s)	86
BsrGI	TGTACA	1 cut(s)	1045
BsrI	ACTGG	4 cut(s)	271, 516, 1481, 1555
BssECI	CCNNGG	8 cut(s)	617, 641, 1068, 1139, 1245, 1624, 1672, 1743
BssMI	GATC	8 cut(s)	429, 550, 1153, 1371, 1390, 1396, 1555, 1774
BssSI	CACGAG	1 cut(s)	1383
BssT1I	CCWWGG	5 cut(s)	617, 1068, 1245, 1672, 1743
Bst2BI	CACGAG	1 cut(s)	1383
Bst2UI	CCWGG	4 cut(s)	582, 810, 1577, 1814
Bst4CI	ACNGT	5 cut(s)	195, 239, 421, 614, 1625
Bst6I	CTCTTC	1 cut(s)	726
BstAUI	TGTACA	1 cut(s)	1045
BstBI	TTCGAA	2 cut(s)	657, 1524
BstC8I	GCNNGC	1 cut(s)	1573
BstDEI	CTNAG	9 cut(s)	291, 426, 438, 762, 846, 1221, 1350, 1443, 1457
BstDSI	CCRYGG	1 cut(s)	1624
BstEII	GGTNACC	1 cut(s)	1282
BstF5I	GGATG	3 cut(s)	1078, 1178, 1645
BstFNI	CGCG	1 cut(s)	26
BstH2I	RGCGCY	1 cut(s)	469
BstHHI	GCGC	1 cut(s)	468
BstKTI	GATC	8 cut(s)	432, 553, 1156, 1374, 1393, 1399, 1558, 1777
BstMAI	GTCTC	3 cut(s)	86, 441, 1222
BstMBI	GATC	8 cut(s)	429, 550, 1153, 1371, 1390, 1396, 1555, 1774
BstMWI	GCNNNNNNNGC	5 cut(s)	35, 1202, 1205, 1459, 1769
BstNI	CCWGG	4 cut(s)	582, 810, 1577, 1814
BstPI	GGTNACC	1 cut(s)	1282
BstSCI	CCNGG	8 cut(s)	45, 242, 580, 640, 808, 1138, 1575, 1812
BstSLI	GKGCMC	1 cut(s)	1476
BstUI	CGCG	1 cut(s)	26
BstV1I	GCAGC	4 cut(s)	119, 1116, 1208, 1217
BstV2I	GAAGAC	2 cut(s)	240, 568
BstX2I	RGATCY	3 cut(s)	1390, 1555, 1774
BstYI	RGATCY	3 cut(s)	1390, 1555, 1774
BsuI	GTATCC	2 cut(s)	1051, 1644
BsuRI	GGCC	3 cut(s)	11, 1575, 1671
BtgI	CCRYGG	1 cut(s)	1624
BtgZI	GCGATG	1 cut(s)	1524
BtsCI	GGATG	3 cut(s)	1078, 1178, 1645
BtsI	GCAGTG	2 cut(s)	511, 1545
BtsIMutI	CAGTG	5 cut(s)	278, 511, 1440, 1474, 1545
BveI	ACCTGC	1 cut(s)	1099
Cac8I	GCNNGC	1 cut(s)	1573
CciI	TCATGA	1 cut(s)	1156
CfoI	GCGC	1 cut(s)	468
Cfr13I	GGNCC	4 cut(s)	62, 1430, 1669, 1754
Csp6I	GTAC	3 cut(s)	240, 1046, 1354
CviAII	CATG	6 cut(s)	18, 100, 433, 473, 1021, 1157
CviQI	GTAC	3 cut(s)	240, 1046, 1354
DdeI	CTNAG	9 cut(s)	291, 426, 438, 762, 846, 1221, 1350, 1443, 1457
DpnI	GATC	8 cut(s)	431, 552, 1155, 1373, 1392, 1398, 1557, 1776
DpnII	GATC	8 cut(s)	429, 550, 1153, 1371, 1390, 1396, 1555, 1774
DriI	GACNNNNNGTC	1 cut(s)	612
EaeI	YGGCCR	2 cut(s)	9, 1573
Eam1104I	CTCTTC	1 cut(s)	726
Eam1105I	GACNNNNNGTC	1 cut(s)	612
EarI	CTCTTC	1 cut(s)	726
Eco130I	CCWWGG	5 cut(s)	617, 1068, 1245, 1672, 1743
Eco31I	GGTCTC	1 cut(s)	86
Eco47I	GGWCC	3 cut(s)	62, 1430, 1754
Eco47III	AGCGCT	1 cut(s)	467
Eco57I	CTGAAG	2 cut(s)	815, 948
Eco91I	GGTNACC	1 cut(s)	1282
EcoO65I	GGTNACC	1 cut(s)	1282
EcoRII	CCWGG	4 cut(s)	580, 808, 1575, 1812
EcoT14I	CCWWGG	5 cut(s)	617, 1068, 1245, 1672, 1743
ErhI	CCWWGG	5 cut(s)	617, 1068, 1245, 1672, 1743
FaeI	CATG	6 cut(s)	21, 103, 436, 476, 1024, 1160
FalI	AAGNNNNNCTT	2 cut(s)	347, 379
FaqI	GGGAC	4 cut(s)	53, 633, 700, 1781
FatI	CATG	6 cut(s)	17, 99, 432, 472, 1020, 1156
FauI	CCCGC	1 cut(s)	22
FauNDI	CATATG	1 cut(s)	691
FblI	GTMKAC	1 cut(s)	1087
Fnu4HI	GCNGC	7 cut(s)	27, 39, 133, 280, 1130, 1197, 1206
FokI	GGATG	3 cut(s)	1085, 1165, 1652
Fsp4HI	GCNGC	7 cut(s)	27, 39, 133, 280, 1130, 1197, 1206
FspBI	CTAG	5 cut(s)	228, 338, 977, 1151, 1164
GlaI	GCGC	1 cut(s)	467
GluI	GCNGC	7 cut(s)	27, 39, 133, 280, 1130, 1197, 1206
HaeII	RGCGCY	1 cut(s)	469
HaeIII	GGCC	3 cut(s)	11, 1575, 1671
HapII	CCGG	7 cut(s)	47, 78, 243, 641, 1139, 1568, 1637
HhaI	GCGC	1 cut(s)	468
Hin1II	CATG	6 cut(s)	21, 103, 436, 476, 1024, 1160
Hin6I	GCGC	1 cut(s)	466
HinP1I	GCGC	1 cut(s)	466
HincII	GTYRAC	2 cut(s)	235, 1088
HindII	GTYRAC	2 cut(s)	235, 1088
HindIII	AAGCTT	1 cut(s)	1268
HinfI	GANTC	7 cut(s)	542, 564, 646, 911, 1118, 1502, 1609
HpaII	CCGG	7 cut(s)	47, 78, 243, 641, 1139, 1568, 1637
HphI	GGTGA	2 cut(s)	1001, 1591
Hpy166II	GTNNAC	6 cut(s)	235, 494, 509, 877, 1088, 1356
Hpy188III	TCNNGA	4 cut(s)	1157, 1383, 1394, 1637
Hpy8I	GTNNAC	6 cut(s)	235, 494, 509, 877, 1088, 1356
Hpy99I	CGWCG	1 cut(s)	1089
HpyAV	CCTTC	5 cut(s)	146, 174, 1400, 1671, 1712
HpyCH4III	ACNGT	5 cut(s)	195, 239, 421, 614, 1625
HpyF10VI	GCNNNNNNNGC	5 cut(s)	35, 1202, 1205, 1459, 1769
HpyF3I	CTNAG	9 cut(s)	291, 426, 438, 762, 846, 1221, 1350, 1443, 1457
Hsp92II	CATG	6 cut(s)	21, 103, 436, 476, 1024, 1160
HspAI	GCGC	1 cut(s)	466
Kpn2I	TCCGGA	1 cut(s)	1636
Kzo9I	GATC	8 cut(s)	429, 550, 1153, 1371, 1390, 1396, 1555, 1774
LmnI	GCTCC	4 cut(s)	80, 276, 463, 755
Lsp1109I	GCAGC	4 cut(s)	119, 1116, 1208, 1217
LweI	GCATC	5 cut(s)	334, 466, 644, 876, 1187
MaeI	CTAG	5 cut(s)	228, 338, 977, 1151, 1164
MaeIII	GTNAC	6 cut(s)	628, 899, 970, 1282, 1579, 1661
MalI	GATC	8 cut(s)	431, 552, 1155, 1373, 1392, 1398, 1557, 1776
MboI	GATC	8 cut(s)	429, 550, 1153, 1371, 1390, 1396, 1555, 1774
MboII	GAAGA	9 cut(s)	240, 353, 457, 573, 722, 743, 808, 941, 1513
MfeI	CAATTG	2 cut(s)	348, 453
MflI	RGATCY	3 cut(s)	1390, 1555, 1774
MhlI	GDGCHC	2 cut(s)	327, 1476
MlsI	TGGCCA	2 cut(s)	11, 1575
MluNI	TGGCCA	2 cut(s)	11, 1575
MlyI	GAGTC	3 cut(s)	558, 655, 1618
MmeI	TCCRAC	3 cut(s)	1287, 1644, 1756
Mox20I	TGGCCA	2 cut(s)	11, 1575
MroI	TCCGGA	1 cut(s)	1636
MscI	TGGCCA	2 cut(s)	11, 1575
MseI	TTAA	4 cut(s)	672, 744, 822, 1365
MslI	CAYNNNNRTG	1 cut(s)	1479
Msp20I	TGGCCA	2 cut(s)	11, 1575
MspA1I	CMGCKG	1 cut(s)	883
MspI	CCGG	7 cut(s)	47, 78, 243, 641, 1139, 1568, 1637
MspR9I	CCNGG	8 cut(s)	47, 244, 582, 642, 810, 1140, 1577, 1814
MunI	CAATTG	2 cut(s)	348, 453
MvaI	CCWGG	4 cut(s)	582, 810, 1577, 1814
MvnI	CGCG	1 cut(s)	26
MwoI	GCNNNNNNNGC	5 cut(s)	35, 1202, 1205, 1459, 1769
NciI	CCSGG	4 cut(s)	47, 244, 642, 1140
NdeI	CATATG	1 cut(s)	691
NdeII	GATC	8 cut(s)	429, 550, 1153, 1371, 1390, 1396, 1555, 1774
NlaIII	CATG	6 cut(s)	21, 103, 436, 476, 1024, 1160
NlaIV	GGNNCC	3 cut(s)	64, 269, 278
NmeAIII	GCCGAG	1 cut(s)	108
NmuCI	GTSAC	3 cut(s)	899, 970, 1579
NspV	TTCGAA	2 cut(s)	657, 1524
PagI	TCATGA	1 cut(s)	1156
PcsI	WCGNNNNNNNCGW	1 cut(s)	1506
PfeI	GAWTC	4 cut(s)	542, 911, 1118, 1502
PflMI	CCANNNNNTGG	1 cut(s)	18
PfoI	TCCNGGA	1 cut(s)	808
PkrI	GCNGC	7 cut(s)	28, 40, 134, 281, 1131, 1198, 1207
PleI	GAGTC	3 cut(s)	558, 654, 1617
PpsI	GAGTC	3 cut(s)	558, 654, 1617
Psp6I	CCWGG	4 cut(s)	580, 808, 1575, 1812
PspEI	GGTNACC	1 cut(s)	1282
PspGI	CCWGG	4 cut(s)	580, 808, 1575, 1812
PspN4I	GGNNCC	3 cut(s)	64, 269, 278
PspPI	GGNCC	4 cut(s)	62, 1430, 1669, 1754
PsuI	RGATCY	3 cut(s)	1390, 1555, 1774
PvuII	CAGCTG	1 cut(s)	883
RsaI	GTAC	3 cut(s)	241, 1047, 1355
RsaNI	GTAC	3 cut(s)	240, 1046, 1354
RseI	CAYNNNNRTG	1 cut(s)	1479
SalI	GTCGAC	1 cut(s)	1086
SaqAI	TTAA	4 cut(s)	672, 744, 822, 1365
SatI	GCNGC	7 cut(s)	27, 39, 133, 280, 1130, 1197, 1206
Sau3AI	GATC	8 cut(s)	429, 550, 1153, 1371, 1390, 1396, 1555, 1774
Sau96I	GGNCC	4 cut(s)	62, 1430, 1669, 1754
SchI	GAGTC	3 cut(s)	558, 655, 1618
ScrFI	CCNGG	8 cut(s)	47, 244, 582, 642, 810, 1140, 1577, 1814
SduI	GDGCHC	2 cut(s)	327, 1476
SfaNI	GCATC	5 cut(s)	334, 466, 644, 876, 1187
SfuI	TTCGAA	2 cut(s)	657, 1524
SinI	GGWCC	3 cut(s)	62, 1430, 1754
SmiMI	CAYNNNNRTG	1 cut(s)	1479
SmlI	CTYRAG	2 cut(s)	326, 1200
SmoI	CTYRAG	2 cut(s)	326, 1200
SpeI	ACTAGT	1 cut(s)	227
SsiI	CCGC	6 cut(s)	5, 26, 29, 38, 280, 1336
SspI	AATATT	1 cut(s)	748
SspMI	CTAG	5 cut(s)	228, 338, 977, 1151, 1164
StyD4I	CCNGG	8 cut(s)	45, 242, 580, 640, 808, 1138, 1575, 1812
StyI	CCWWGG	5 cut(s)	617, 1068, 1245, 1672, 1743
TaaI	ACNGT	5 cut(s)	195, 239, 421, 614, 1625
TaqI	TCGA	4 cut(s)	176, 657, 1087, 1524
TatI	WGTACW	2 cut(s)	1045, 1353
TauI	GCSGC	3 cut(s)	29, 41, 282
TfiI	GAWTC	4 cut(s)	542, 911, 1118, 1502
Tru1I	TTAA	4 cut(s)	672, 744, 822, 1365
Tru9I	TTAA	4 cut(s)	672, 744, 822, 1365
TscAI	CASTG	5 cut(s)	278, 511, 1447, 1481, 1545
TseFI	GTSAC	3 cut(s)	899, 970, 1579
TseI	GCWGC	4 cut(s)	132, 1129, 1196, 1205
Tsp45I	GTSAC	3 cut(s)	899, 970, 1579
TspGWI	ACGGA	1 cut(s)	139
TspRI	CASTG	5 cut(s)	278, 511, 1447, 1481, 1545
Van91I	CCANNNNNTGG	1 cut(s)	18
VpaK11BI	GGWCC	3 cut(s)	62, 1430, 1754
XapI	RAATTY	6 cut(s)	104, 660, 787, 922, 954, 1688
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1189
XmiI	GTMKAC	1 cut(s)	1087
XspI	CTAG	5 cut(s)	228, 338, 977, 1151, 1164

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.