Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0014111

Physical Location & Seq

Genomic Coordinates Forward (+)

57685764 .. 57689650

Gene Structure 3887 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000004251

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1890 bp

ATGGCGGTGGCCAATTCCTGGGTCGCGGCGGGTCAGGCAGCAATCCCGGTAGCGCAATTCGGACCCTTCTGCTGCTCCGGTCTCCTATCCAATAAGTCCATCAAATTCAACCACGCCAATAAAAATCTCGGCTGCCTTCTCACTTTCTCCGTCCAATCCAAGCCTTCATCTTCTTCGTCTGGTTCGAGTAGGAATAGAAAACTGTGTTGCAGTTGTGGTGGCGAGAATAACACCACTAGTGTTGACTGTACCGGGTCTTCTTTGGAATGGGATTGGAACCAGTGGAGCCGCCATTTTTCTGAGATTGAACAAGCAGAGAGCTTTGCCTCTGTGCTCAAGTTTCAACTAGAAGATGCAATTGAGAAGCAAGACTTCCAAGAAGCTATGAAACTGAAAATGGCTATTGCAGAAGCTACATCAAAGGACACGGTTGCTAAGATCATGTCTCAGTTGAAGATTGCAATCGAGGAGGAGCGCTACCATGATGCTTCAAAATTGTGTAAACACACAGGCAGTGGACTGGTAGGCTGGTGGGTTGGCTACCCTAAAGATTCAGATGATCCCTTTGGAAGACTCATACAAATAACTCCTGGTGTTGGCAGATTTGTTGGCAGGACTTACAGTCCAAGGCAGTTGGTTACAGCATCTCCGGGGAGTCCCCTATTCGAAATTTTTGTCGTTAAAAATGCAGATGGGACATATGTTATGCAGGTGGTGTACTTGCAACAGGCCAAAGCCAACTCCACTATTGCACCATCCAAACCTGAAAAAGGCTCATCTACTCCTGAAGTTGAGAATGCAACTGTAGTAGATGTTCAGAAAAATGAAGATAAGGTAGAGAGTAGCGAAGAGAAAGGACTTAATATTGAGGGAGCAACTGAGGAGGGTATAAAAAGTGTGATAAATTTTCTGAAGAAAAAACTTCCAGGACTGAAAGTTAAAGTTATGAATGTTGATGTTGCTAAGGAAGTGATGGAGGACGATAATTCGGTAAACCAGCTGATGCAAGAAAATAGTGAAAACTCTGAATCTGATGAAAATTCTGAAGATGAAGTTGATACTTTGGATGAAATTCAGCCTGATGAGGTCACTCTAGGAGAGAGTGGTGATACCATAGATGATGAAAAAGATTTGGACATGAAACTTTTTATTGGGGGAATTGTACATAATGAGGATACTGCTACCAAGGATGAGTATGTTCGTCGACCTGCTGAAATCAAAGATATGGAGAGAGAATCTTTTGTGCTGCATATTCCGGGGAGAAGCCTAGATCATGATACTAGAGAAAGTAAAGCATCCAAGATAAAAGTGGCAGCTCAAGCAGCTAAAAGTGTCTCTGAGCTTATGCCATCTGATGTTGCCAAGGCATTTTGGAACTCTGACAAGCTTTCTCCAAAGGTTACCAAAAATATGCGTGAAATAGTGAAACTTGCTGTTAGTCAAGCACAGAAGCGGAGTAGATTATCTGAGTACACAACATTTAATCGGATCAGCACCTCACGAGGGGATCTTGATCCATTTGAAGGTCTGTATGTTGGTGCATTTGGTCCTTATGGCACCGAGGTAGTGCAACTCAGGCGTAAGTATGGGCACTGGAATGGTTCAGATGACAAAGACGATTCTGGCGATGTGGAGTTCTTCGAATATGTTGAGGCAGTGAAGCTAACTGGGGATCTAAATGTTCCTGCTGGCCAGGTTGCAAGTTTCAAGGGCCAAGGAAGGATAGCAGAATTTGGCTTCCGAAATCCAAAATGGGTTGAAGGAGAACTACTCCAACTCAATGCCAAGGGTATTGGACCATATGCCAAAGGTGCAGATCTTGGTTTTCTTTACGTTGTCCCAGAGCAAAGTTTCCTGGTATTGTTCAATCGCCTGAAACTACCAGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0000304 GO:0005575 GO:0005622 GO:0005623 GO:0006950 GO:0006979 GO:0007154 GO:0007584 GO:0008150 GO:0008219 GO:0009579 GO:0009605 GO:0009987 GO:0009991 GO:0010035 GO:0010343 GO:0012501 GO:0016020 GO:0031667 GO:0031668 GO:0031669 GO:0031670 GO:0033554 GO:0034357 GO:0034599 GO:0034614 GO:0035690 GO:0036473 GO:0042221 GO:0042493 GO:0042651 GO:0044424 GO:0044436 GO:0044464 GO:0050896 GO:0051716 GO:0070887 GO:0071452 GO:0071496 GO:0097468 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3506 UVR

Protein Analysis

630

Amino Acids

69.37

Weight (kDa)

5.09

Isoelectric Point (pI)

39.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cyclin_D1_bind	PF12014	495 - 566	4.6e-16	Cyclin D1 binding domain
Cyclin_D1_bind	PF12014	566 - 627	7.4e-08	Cyclin D1 binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014111)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27510
fragaria_vesca	FvH4_5g05220
malus_domestica	MD06G1175500.v1.1 MD14G1182300.v1.1
prunus_persica	Prupe.5G174800_v2.0.a1
pyrus_communis	pycom06g15620 pycom14g15120
rosa_chinensis	RchiOBHm_Chr7g0193691
rosa_laevigata	RLG00000004251
rosa_multiflora	Rmu_sc0001436.1_g000008
rosa_roxburghii	Rroxscaffold_3G00261900
rosa_rugosa	Rorug07G0011400
rosa_samantha	Rh7AG138100 Rh7BG138300 Rh7CG142000 Rh7DG139400
rosa_wichuraiana	Rw7G011760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	700
Acc36I	ACCTGC	2 cut(s)	700, 1216
AccB1I	GGYRCC	1 cut(s)	1556
AccB7I	CCANNNNNTGG	1 cut(s)	18
AccI	GTMKAC	1 cut(s)	1204
AccII	CGCG	1 cut(s)	26
AciI	CCGC	5 cut(s)	5, 26, 29, 289, 1453
AclWI	GGATC	5 cut(s)	554, 1496, 1508, 1515, 1680
AcoI	YGGCCR	2 cut(s)	9, 1690
AcsI	RAATTY	6 cut(s)	104, 669, 904, 1039, 1071, 1730
AcuI	CTGAAG	3 cut(s)	807, 932, 1065
AfaI	GTAC	4 cut(s)	250, 719, 1164, 1472
AfeI	AGCGCT	1 cut(s)	476
AfiI	CCNNNNNNNGG	5 cut(s)	18, 596, 770, 1503, 1523
AgsI	TTSAA	9 cut(s)	109, 308, 344, 454, 492, 1523, 1708, 1760, 1867
AhdI	GACNNNNNGTC	1 cut(s)	621
AhlI	ACTAGT	1 cut(s)	236
AjnI	CCWGG	5 cut(s)	17, 589, 925, 1692, 1854
AluBI	AGCT	9 cut(s)	321, 383, 413, 1000, 1316, 1325, 1342, 1387, 1663
AluI	AGCT	9 cut(s)	321, 383, 413, 1000, 1316, 1325, 1342, 1387, 1663
Alw21I	GWGCWC	1 cut(s)	336
Alw26I	GTCTC	3 cut(s)	86, 450, 1339
AlwI	GGATC	5 cut(s)	554, 1496, 1508, 1515, 1680
Aor51HI	AGCGCT	1 cut(s)	476
AoxI	GGCC	4 cut(s)	9, 729, 1690, 1711
ApeKI	GCWGC	6 cut(s)	38, 72, 132, 1246, 1313, 1322
ApoI	RAATTY	6 cut(s)	104, 669, 904, 1039, 1071, 1730
ArsI	GACNNNNNNTTYG	2 cut(s)	660, 692
AspLEI	GCGC	2 cut(s)	55, 477
AspS9I	GGNCC	4 cut(s)	62, 1547, 1711, 1796
AsuC2I	CCSGG	4 cut(s)	47, 253, 651, 1257
AsuHPI	GGTGA	1 cut(s)	1118
AsuII	TTCGAA	2 cut(s)	666, 1641
AvaII	GGWCC	3 cut(s)	62, 1547, 1796
BaeGI	GKGCMC	1 cut(s)	1593
BalI	TGGCCA	2 cut(s)	11, 1692
BanI	GGYRCC	1 cut(s)	1556
BarI	GAAGNNNNNNTAC	4 cut(s)	241, 273, 1752, 1784
BauI	CACGAG	1 cut(s)	1500
BbsI	GAAGAC	2 cut(s)	249, 577
Bbv12I	GWGCWC	1 cut(s)	336
BbvI	GCAGC	6 cut(s)	50, 59, 119, 1233, 1325, 1334
BccI	CCATC	5 cut(s)	107, 686, 763, 967, 1357
BciT130I	CCWGG	5 cut(s)	19, 591, 927, 1694, 1856
BciVI	GTATCC	1 cut(s)	1168
BcnI	CCSGG	4 cut(s)	47, 253, 651, 1257
BcoDI	GTCTC	3 cut(s)	86, 450, 1339
BcuI	ACTAGT	1 cut(s)	236
BfaI	CTAG	5 cut(s)	237, 347, 1094, 1268, 1281
BfmI	CTRYAG	1 cut(s)	804
BfoI	RGCGCY	1 cut(s)	478
BfuAI	ACCTGC	2 cut(s)	700, 1216
BfuI	GTATCC	1 cut(s)	1168
BglII	AGATCT	1 cut(s)	1816
BisI	GCNGC	8 cut(s)	27, 39, 73, 133, 289, 1247, 1314, 1323
BlsI	GCNGC	8 cut(s)	28, 40, 74, 134, 290, 1248, 1315, 1324
Bme1390I	CCNGG	9 cut(s)	19, 47, 253, 591, 651, 927, 1257, 1694, 1856
Bme18I	GGWCC	3 cut(s)	62, 1547, 1796
BmeRI	GACNNNNNGTC	1 cut(s)	621
BmgT120I	GGNCC	4 cut(s)	62, 1547, 1711, 1796
BmiI	GGNNCC	4 cut(s)	64, 278, 287, 1558
BmrFI	CCNGG	9 cut(s)	19, 47, 253, 591, 651, 927, 1257, 1694, 1856
BmrI	ACTGGG	1 cut(s)	1677
BmsI	GCATC	5 cut(s)	343, 475, 653, 993, 1304
BmuI	ACTGGG	1 cut(s)	1677
BpiI	GAAGAC	2 cut(s)	249, 577
BplI	GAGNNNNNCTC	2 cut(s)	1755, 1787
Bpu10I	CCTNAGC	1 cut(s)	963
Bpu14I	TTCGAA	2 cut(s)	666, 1641
BpuEI	CTTGAG	2 cut(s)	320, 1302
BpuMI	CCSGG	4 cut(s)	47, 253, 651, 1257
BsaBI	GATNNNNATC	2 cut(s)	461, 1512
BsaI	GGTCTC	1 cut(s)	86
BsaJI	CCNNGG	9 cut(s)	18, 626, 650, 1185, 1256, 1362, 1560, 1714, 1785
BsaWI	WCCGGW	1 cut(s)	77
BsaXI	ACNNNNNCTCC	2 cut(s)	631, 661
Bsc4I	CCNNNNNNNGG	5 cut(s)	18, 596, 770, 1503, 1523
Bse1I	ACTGG	4 cut(s)	280, 525, 1598, 1672
Bse8I	GATNNNNATC	2 cut(s)	461, 1512
BseBI	CCWGG	5 cut(s)	19, 591, 927, 1694, 1856
BseDI	CCNNGG	9 cut(s)	18, 626, 650, 1185, 1256, 1362, 1560, 1714, 1785
BseGI	GGATG	4 cut(s)	755, 1072, 1195, 1295
BseJI	GATNNNNATC	2 cut(s)	461, 1512
BseLI	CCNNNNNNNGG	5 cut(s)	18, 596, 770, 1503, 1523
BseMII	CTCAG	6 cut(s)	291, 461, 870, 1329, 1458, 1588
BseNI	ACTGG	4 cut(s)	280, 525, 1598, 1672
BseRI	GAGGAG	3 cut(s)	482, 485, 896
BseSI	GKGCMC	1 cut(s)	1593
BseXI	GCAGC	6 cut(s)	50, 59, 119, 1233, 1325, 1334
BsgI	GTGCAG	1 cut(s)	1833
Bsh1236I	CGCG	1 cut(s)	26
BshFI	GGCC	4 cut(s)	11, 731, 1692, 1713
BshNI	GGYRCC	1 cut(s)	1556
BsiHKAI	GWGCWC	1 cut(s)	336
BsiSI	CCGG	5 cut(s)	47, 78, 252, 650, 1256
BslFI	GGGAC	3 cut(s)	642, 709, 1823
BslI	CCNNNNNNNGG	5 cut(s)	18, 596, 770, 1503, 1523
BsmAI	GTCTC	3 cut(s)	86, 450, 1339
BsmFI	GGGAC	3 cut(s)	642, 709, 1823
BsmI	GAATGC	1 cut(s)	802
BsnI	GGCC	4 cut(s)	11, 731, 1692, 1713
Bso31I	GGTCTC	1 cut(s)	86
Bsp119I	TTCGAA	2 cut(s)	666, 1641
Bsp1286I	GDGCHC	2 cut(s)	336, 1593
Bsp1407I	TGTACA	1 cut(s)	1162
Bsp143I	GATC	8 cut(s)	438, 559, 1270, 1488, 1507, 1513, 1672, 1816
BspACI	CCGC	5 cut(s)	5, 26, 29, 289, 1453
BspANI	GGCC	4 cut(s)	11, 731, 1692, 1713
BspCNI	CTCAG	6 cut(s)	292, 460, 871, 1330, 1459, 1587
BspFNI	CGCG	1 cut(s)	26
BspHI	TCATGA	1 cut(s)	1273
BspLI	GGNNCC	4 cut(s)	64, 278, 287, 1558
BspMI	ACCTGC	2 cut(s)	700, 1216
BspPI	GGATC	5 cut(s)	554, 1496, 1508, 1515, 1680
BspT104I	TTCGAA	2 cut(s)	666, 1641
BspT107I	GGYRCC	1 cut(s)	1556
BspTNI	GGTCTC	1 cut(s)	86
BsrGI	TGTACA	1 cut(s)	1162
BsrI	ACTGG	4 cut(s)	280, 525, 1598, 1672
BssECI	CCNNGG	9 cut(s)	18, 626, 650, 1185, 1256, 1362, 1560, 1714, 1785
BssMI	GATC	8 cut(s)	438, 559, 1270, 1488, 1507, 1513, 1672, 1816
BssSI	CACGAG	1 cut(s)	1500
BssT1I	CCWWGG	5 cut(s)	626, 1185, 1362, 1714, 1785
Bst2BI	CACGAG	1 cut(s)	1500
Bst2UI	CCWGG	5 cut(s)	19, 591, 927, 1694, 1856
Bst4CI	ACNGT	5 cut(s)	204, 248, 430, 623, 805
Bst6I	CTCTTC	1 cut(s)	843
BstAUI	TGTACA	1 cut(s)	1162
BstBI	TTCGAA	2 cut(s)	666, 1641
BstC8I	GCNNGC	1 cut(s)	1690
BstDEI	CTNAG	8 cut(s)	300, 435, 447, 879, 963, 1338, 1467, 1574
BstEII	GGTNACC	1 cut(s)	1399
BstENI	CCTNNNNNAGG	1 cut(s)	768
BstF5I	GGATG	4 cut(s)	755, 1072, 1195, 1295
BstFNI	CGCG	1 cut(s)	26
BstH2I	RGCGCY	1 cut(s)	478
BstHHI	GCGC	2 cut(s)	55, 477
BstKTI	GATC	8 cut(s)	441, 562, 1273, 1491, 1510, 1516, 1675, 1819
BstMAI	GTCTC	3 cut(s)	86, 450, 1339
BstMBI	GATC	8 cut(s)	438, 559, 1270, 1488, 1507, 1513, 1672, 1816
BstMWI	GCNNNNNNNGC	5 cut(s)	35, 1319, 1322, 1576, 1811
BstNI	CCWGG	5 cut(s)	19, 591, 927, 1694, 1856
BstPI	GGTNACC	1 cut(s)	1399
BstSCI	CCNGG	9 cut(s)	17, 45, 251, 589, 649, 925, 1255, 1692, 1854
BstSFI	CTRYAG	1 cut(s)	804
BstSLI	GKGCMC	1 cut(s)	1593
BstUI	CGCG	1 cut(s)	26
BstV1I	GCAGC	6 cut(s)	50, 59, 119, 1233, 1325, 1334
BstV2I	GAAGAC	2 cut(s)	249, 577
BstX2I	RGATCY	3 cut(s)	1507, 1672, 1816
BstYI	RGATCY	3 cut(s)	1507, 1672, 1816
BsuI	GTATCC	1 cut(s)	1168
BsuRI	GGCC	4 cut(s)	11, 731, 1692, 1713
BtgZI	GCGATG	1 cut(s)	1641
BtsCI	GGATG	4 cut(s)	755, 1072, 1195, 1295
BtsI	GCAGTG	2 cut(s)	520, 1662
BtsIMutI	CAGTG	4 cut(s)	287, 520, 1591, 1662
BveI	ACCTGC	2 cut(s)	700, 1216
Cac8I	GCNNGC	1 cut(s)	1690
CciI	TCATGA	1 cut(s)	1273
CfoI	GCGC	2 cut(s)	55, 477
Cfr13I	GGNCC	4 cut(s)	62, 1547, 1711, 1796
Csp6I	GTAC	4 cut(s)	249, 718, 1163, 1471
CspCI	CAANNNNNGTGG	2 cut(s)	223, 258
CviAII	CATG	4 cut(s)	442, 482, 1138, 1274
CviQI	GTAC	4 cut(s)	249, 718, 1163, 1471
DdeI	CTNAG	8 cut(s)	300, 435, 447, 879, 963, 1338, 1467, 1574
DpnI	GATC	8 cut(s)	440, 561, 1272, 1490, 1509, 1515, 1674, 1818
DpnII	GATC	8 cut(s)	438, 559, 1270, 1488, 1507, 1513, 1672, 1816
DriI	GACNNNNNGTC	1 cut(s)	621
EaeI	YGGCCR	2 cut(s)	9, 1690
Eam1104I	CTCTTC	1 cut(s)	843
Eam1105I	GACNNNNNGTC	1 cut(s)	621
EarI	CTCTTC	1 cut(s)	843
Eco130I	CCWWGG	5 cut(s)	626, 1185, 1362, 1714, 1785
Eco31I	GGTCTC	1 cut(s)	86
Eco47I	GGWCC	3 cut(s)	62, 1547, 1796
Eco47III	AGCGCT	1 cut(s)	476
Eco57I	CTGAAG	3 cut(s)	807, 932, 1065
Eco91I	GGTNACC	1 cut(s)	1399
EcoNI	CCTNNNNNAGG	1 cut(s)	768
EcoO65I	GGTNACC	1 cut(s)	1399
EcoRII	CCWGG	5 cut(s)	17, 589, 925, 1692, 1854
EcoT14I	CCWWGG	5 cut(s)	626, 1185, 1362, 1714, 1785
ErhI	CCWWGG	5 cut(s)	626, 1185, 1362, 1714, 1785
FaeI	CATG	4 cut(s)	445, 485, 1141, 1277
FalI	AAGNNNNNCTT	2 cut(s)	356, 388
FaqI	GGGAC	3 cut(s)	642, 709, 1823
FatI	CATG	4 cut(s)	441, 481, 1137, 1273
FauI	CCCGC	1 cut(s)	22
FauNDI	CATATG	2 cut(s)	700, 1801
FblI	GTMKAC	1 cut(s)	1204
Fnu4HI	GCNGC	8 cut(s)	27, 39, 73, 133, 289, 1247, 1314, 1323
FokI	GGATG	4 cut(s)	742, 1079, 1202, 1282
Fsp4HI	GCNGC	8 cut(s)	27, 39, 73, 133, 289, 1247, 1314, 1323
FspBI	CTAG	5 cut(s)	237, 347, 1094, 1268, 1281
GlaI	GCGC	2 cut(s)	54, 476
GluI	GCNGC	8 cut(s)	27, 39, 73, 133, 289, 1247, 1314, 1323
HaeII	RGCGCY	1 cut(s)	478
HaeIII	GGCC	4 cut(s)	11, 731, 1692, 1713
HapII	CCGG	5 cut(s)	47, 78, 252, 650, 1256
HhaI	GCGC	2 cut(s)	55, 477
Hin1II	CATG	4 cut(s)	445, 485, 1141, 1277
Hin6I	GCGC	2 cut(s)	53, 475
HinP1I	GCGC	2 cut(s)	53, 475
HincII	GTYRAC	2 cut(s)	244, 1205
HindII	GTYRAC	2 cut(s)	244, 1205
HindIII	AAGCTT	1 cut(s)	1385
HinfI	GANTC	6 cut(s)	551, 573, 655, 1028, 1235, 1619
HpaII	CCGG	5 cut(s)	47, 78, 252, 650, 1256
HphI	GGTGA	1 cut(s)	1118
Hpy166II	GTNNAC	7 cut(s)	244, 503, 518, 718, 994, 1205, 1473
Hpy188III	TCNNGA	4 cut(s)	785, 1274, 1500, 1511
Hpy8I	GTNNAC	7 cut(s)	244, 503, 518, 718, 994, 1205, 1473
Hpy99I	CGWCG	1 cut(s)	1206
HpyAV	CCTTC	6 cut(s)	76, 146, 174, 1517, 1713, 1754
HpyCH4III	ACNGT	5 cut(s)	204, 248, 430, 623, 805
HpyCH4IV	ACGT	1 cut(s)	1833
HpyF10VI	GCNNNNNNNGC	5 cut(s)	35, 1319, 1322, 1576, 1811
HpyF3I	CTNAG	8 cut(s)	300, 435, 447, 879, 963, 1338, 1467, 1574
HpySE526I	ACGT	1 cut(s)	1833
Hsp92II	CATG	4 cut(s)	445, 485, 1141, 1277
HspAI	GCGC	2 cut(s)	53, 475
Kzo9I	GATC	8 cut(s)	438, 559, 1270, 1488, 1507, 1513, 1672, 1816
LmnI	GCTCC	4 cut(s)	80, 285, 472, 872
Lsp1109I	GCAGC	6 cut(s)	50, 59, 119, 1233, 1325, 1334
LweI	GCATC	5 cut(s)	343, 475, 653, 993, 1304
MaeI	CTAG	5 cut(s)	237, 347, 1094, 1268, 1281
MaeII	ACGT	1 cut(s)	1833
MaeIII	GTNAC	3 cut(s)	637, 1087, 1399
MalI	GATC	8 cut(s)	440, 561, 1272, 1490, 1509, 1515, 1674, 1818
MboI	GATC	8 cut(s)	438, 559, 1270, 1488, 1507, 1513, 1672, 1816
MfeI	CAATTG	1 cut(s)	357
MflI	RGATCY	3 cut(s)	1507, 1672, 1816
MhlI	GDGCHC	2 cut(s)	336, 1593
MlsI	TGGCCA	2 cut(s)	11, 1692
MluNI	TGGCCA	2 cut(s)	11, 1692
MlyI	GAGTC	2 cut(s)	567, 664
MmeI	TCCRAC	1 cut(s)	1798
Mox20I	TGGCCA	2 cut(s)	11, 1692
MscI	TGGCCA	2 cut(s)	11, 1692
MseI	TTAA	4 cut(s)	681, 861, 939, 1482
MslI	CAYNNNNRTG	1 cut(s)	1596
Msp20I	TGGCCA	2 cut(s)	11, 1692
MspA1I	CMGCKG	1 cut(s)	1000
MspI	CCGG	5 cut(s)	47, 78, 252, 650, 1256
MspR9I	CCNGG	9 cut(s)	19, 47, 253, 591, 651, 927, 1257, 1694, 1856
MunI	CAATTG	1 cut(s)	357
Mva1269I	GAATGC	1 cut(s)	802
MvaI	CCWGG	5 cut(s)	19, 591, 927, 1694, 1856
MvnI	CGCG	1 cut(s)	26
MwoI	GCNNNNNNNGC	5 cut(s)	35, 1319, 1322, 1576, 1811
NciI	CCSGG	4 cut(s)	47, 253, 651, 1257
NdeI	CATATG	2 cut(s)	700, 1801
NdeII	GATC	8 cut(s)	438, 559, 1270, 1488, 1507, 1513, 1672, 1816
NlaIII	CATG	4 cut(s)	445, 485, 1141, 1277
NlaIV	GGNNCC	4 cut(s)	64, 278, 287, 1558
NmeAIII	GCCGAG	1 cut(s)	108
NmuCI	GTSAC	1 cut(s)	1087
NspV	TTCGAA	2 cut(s)	666, 1641
PagI	TCATGA	1 cut(s)	1273
PaqCI	CACCTGC	1 cut(s)	700
PcsI	WCGNNNNNNNCGW	2 cut(s)	182, 1623
PctI	GAATGC	1 cut(s)	802
PfeI	GAWTC	4 cut(s)	551, 1028, 1235, 1619
PflMI	CCANNNNNTGG	1 cut(s)	18
PfoI	TCCNGGA	1 cut(s)	925
PkrI	GCNGC	8 cut(s)	28, 40, 74, 134, 290, 1248, 1315, 1324
PleI	GAGTC	2 cut(s)	567, 663
PpsI	GAGTC	2 cut(s)	567, 663
Psp6I	CCWGG	5 cut(s)	17, 589, 925, 1692, 1854
PspEI	GGTNACC	1 cut(s)	1399
PspGI	CCWGG	5 cut(s)	17, 589, 925, 1692, 1854
PspN4I	GGNNCC	4 cut(s)	64, 278, 287, 1558
PspPI	GGNCC	4 cut(s)	62, 1547, 1711, 1796
PsrI	GAACNNNNNNTAC	2 cut(s)	798, 830
PsuI	RGATCY	3 cut(s)	1507, 1672, 1816
PvuII	CAGCTG	1 cut(s)	1000
RsaI	GTAC	4 cut(s)	250, 719, 1164, 1472
RsaNI	GTAC	4 cut(s)	249, 718, 1163, 1471
RseI	CAYNNNNRTG	1 cut(s)	1596
SalI	GTCGAC	1 cut(s)	1203
SaqAI	TTAA	4 cut(s)	681, 861, 939, 1482
SatI	GCNGC	8 cut(s)	27, 39, 73, 133, 289, 1247, 1314, 1323
Sau3AI	GATC	8 cut(s)	438, 559, 1270, 1488, 1507, 1513, 1672, 1816
Sau96I	GGNCC	4 cut(s)	62, 1547, 1711, 1796
SchI	GAGTC	2 cut(s)	567, 664
ScrFI	CCNGG	9 cut(s)	19, 47, 253, 591, 651, 927, 1257, 1694, 1856
SduI	GDGCHC	2 cut(s)	336, 1593
SfaNI	GCATC	5 cut(s)	343, 475, 653, 993, 1304
SfcI	CTRYAG	1 cut(s)	804
SfuI	TTCGAA	2 cut(s)	666, 1641
SinI	GGWCC	3 cut(s)	62, 1547, 1796
SmiMI	CAYNNNNRTG	1 cut(s)	1596
SmlI	CTYRAG	2 cut(s)	335, 1317
SmoI	CTYRAG	2 cut(s)	335, 1317
SpeI	ACTAGT	1 cut(s)	236
SsiI	CCGC	5 cut(s)	5, 26, 29, 289, 1453
SspI	AATATT	1 cut(s)	865
SspMI	CTAG	5 cut(s)	237, 347, 1094, 1268, 1281
StyD4I	CCNGG	9 cut(s)	17, 45, 251, 589, 649, 925, 1255, 1692, 1854
StyI	CCWWGG	5 cut(s)	626, 1185, 1362, 1714, 1785
TaaI	ACNGT	5 cut(s)	204, 248, 430, 623, 805
TaiI	ACGT	1 cut(s)	1836
TaqI	TCGA	5 cut(s)	185, 465, 666, 1204, 1641
TatI	WGTACW	3 cut(s)	717, 1162, 1470
TauI	GCSGC	2 cut(s)	29, 291
TfiI	GAWTC	4 cut(s)	551, 1028, 1235, 1619
Tru1I	TTAA	4 cut(s)	681, 861, 939, 1482
Tru9I	TTAA	4 cut(s)	681, 861, 939, 1482
TscAI	CASTG	4 cut(s)	287, 520, 1598, 1662
TseFI	GTSAC	1 cut(s)	1087
TseI	GCWGC	6 cut(s)	38, 72, 132, 1246, 1313, 1322
Tsp45I	GTSAC	1 cut(s)	1087
TspDTI	ATGAA	9 cut(s)	156, 401, 840, 962, 1050, 1065, 1083, 1137, 1154
TspGWI	ACGGA	1 cut(s)	139
TspRI	CASTG	4 cut(s)	287, 520, 1598, 1662
Van91I	CCANNNNNTGG	1 cut(s)	18
VpaK11BI	GGWCC	3 cut(s)	62, 1547, 1796
XagI	CCTNNNNNAGG	1 cut(s)	768
XapI	RAATTY	6 cut(s)	104, 669, 904, 1039, 1071, 1730
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1306
XmiI	GTMKAC	1 cut(s)	1204
XspI	CTAG	5 cut(s)	237, 347, 1094, 1268, 1281

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.