FvH4_5g08170

cytochrome P450

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
4755544 .. 4757448
1905 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g08170.t1

Sequence Viewer

Length: 1404 bp
ATGTTCATCACTCCTCTCTTCATACTCTGGTGTCTAACCCTTCTCCTCCTCTACTTCTTGTTCTCCATCATCCAACAATCCTATGCCCTCAAATCGTCGAAAAAGCCTTCCCTCTTCTCCTCCTACGGCCCTCCTTCCTACCCTATAATCGGTTGCCTCATCTCCTTCTACAAAAACCAGCACCGTCTCCTGGAATGGTACACCGACATGTTGTCCACCTCGCCATCACAAACTATCGTCCTCCAACGCCTCGGCGTGGGGCGACGTATCATTGTGACGGCAAACCCGGCCAACGTGGAGTACATTCTCAAGACCAACTTCTCCAACTTCCCAAAAGGCAAGCCCCTCACGGAGTTCCTCGGCGACTTGTTCGGCTGCGGCATATTCAACGTCGACGGTGAGCTGTGGTCAACGCAGCGCAAGCTTGCCAGCCATGAGTTTAGCACAAGGTCTCCTTGGGTACCGACCCGTTTTTGCCTCGACTTGTCCCGCCCTGTGCCGCCGCTCGTCAAGGCCTTCGACTGCGCGTCGGAGATAAGTGCCCGGCGTGCAACGGCGCCGCTCTACGTGATTTGGAAGCTGAAGCGCGCTTTGGCTGTTGGTTCTGAAAGCAAGCTCAAAGATGCTATCAAAGTCGTACATGATTCTGTTCAAGAAATAGTAGATAACAAAAGGAAAATCCTTGAAGAAAATGAGGGAAAGAGCTGCGGGAGTGACTTGTTGTCACGTTTGTTATTGGCGGGACACGATGAGAAAGTGGTGAGAGACATGGTGATAAGCTTCATACTGGCCGGACGGGACACGACGCCCTCCGCTATGACTTGGCTGTTTTGGTTGCTCAGCAAGCATCCGAGCGTACAGCATGAGATAGTGAACGAAGTTGCAGAAGTACTAAACAATGATACTATTGAGAGTGGTACTGCAGCATTAGGGTTTGAAGAGTTGCAAGAAATGAAATATCTGAGGGCTTGCTTGTGCGAGTCAATGCGGCTGTACCCGCCGGTCCCGTGGGACTCTAAGCATGCCGAGGCCGGGACTGTTTTGCCGGACGGGACTTGGGTTGGGAAAGGGGATAGAGTCACGTATTTTCCTTATGGGATGGGGAGGATGGAGGAGCTGTGGGGGAAGGACCGGTTCGAGTTCAAACCGGACAGGTGGTTCAGTGATGAATCGGGTAGGGTGATGAAAATGGTGAGTCCTTACAAATTTCCGGTTTTCCAGGCCGGTCCGAGAGTTTGTCTTGGGAAGGAGATGGCTTTTATTCAGATGAAGTATGTAATGGCTTCGGTGTTGAGGCGGTTTGAGATCAAACCGGTTCATGAAATGGACAAACCGGTTTTTGTTCCTCTCTTGACGGCACACATGGCCGGTGGGTTGAAGGTCTTGGTTCAAAAGAGAAGTTAG

Protein Analysis

468

Amino Acids

53.04

Weight (kDa)

9.02

Isoelectric Point (pI)

44.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 167 - 446 6.5e-49 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0009901)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 460
AccB1I GGYRCC 2 cut(s) 460, 556
AccBSI CCGCTC 2 cut(s) 505, 562
AccI GTMKAC 1 cut(s) 393
AccII CGCG 2 cut(s) 527, 588
AcoI YGGCCR 3 cut(s) 288, 789, 1365
AcsI RAATTY 1 cut(s) 1205
AcuI CTGAAG 1 cut(s) 602
AcyI GRCGYC 2 cut(s) 557, 806
AfaI GTAC 8 cut(s) 200, 302, 462, 639, 858, 891, 919, 995
AfiI CCNNNNNNNGG 4 cut(s) 149, 190, 256, 1032
AflIII ACRYGT 1 cut(s) 207
AgeI ACCGGT 3 cut(s) 1131, 1312, 1333
AgsI TTSAA 7 cut(s) 388, 653, 686, 938, 1144, 1378, 1391
AhdI GACNNNNNGTC 3 cut(s) 211, 526, 721
AjnI CCWGG 2 cut(s) 189, 1218
AjuI GAANNNNNNNTTGG 2 cut(s) 575, 607
AloI GAACNNNNNNTCC 2 cut(s) 1142, 1174
AluBI AGCT 7 cut(s) 403, 424, 580, 616, 705, 780, 1117
AluI AGCT 7 cut(s) 403, 424, 580, 616, 705, 780, 1117
Alw26I GTCTC 3 cut(s) 191, 456, 759
AoxI GGCC 7 cut(s) 127, 288, 513, 789, 1029, 1221, 1365
ApeKI GCWGC 4 cut(s) 375, 415, 705, 923
ApoI RAATTY 1 cut(s) 1205
AsiGI ACCGGT 3 cut(s) 1131, 1312, 1333
Asp718I GGTACC 1 cut(s) 460
AspLEI GCGC 5 cut(s) 420, 527, 559, 588, 590
AspS9I GGNCC 4 cut(s) 128, 1003, 1129, 1226
AsuC2I CCSGG 3 cut(s) 287, 544, 1033
AsuHPI GGTGA 5 cut(s) 410, 772, 784, 1192, 1204
AvaII GGWCC 3 cut(s) 1003, 1129, 1226
BaeGI GKGCMC 1 cut(s) 544
BanI GGYRCC 2 cut(s) 460, 556
BbvI GCAGC 4 cut(s) 362, 427, 692, 935
BccI CCATC 5 cut(s) 74, 232, 1093, 1102, 1246
BceAI ACGGC 4 cut(s) 142, 294, 570, 1371
BciT130I CCWGG 2 cut(s) 191, 1220
BcnI CCSGG 3 cut(s) 287, 544, 1033
BcoDI GTCTC 3 cut(s) 191, 456, 759
BfmI CTRYAG 1 cut(s) 921
BfoI RGCGCY 1 cut(s) 560
BisI GCNGC 9 cut(s) 376, 379, 416, 500, 503, 560, 706, 924, 989
BlpI GCTNAGC 1 cut(s) 839
BlsI GCNGC 9 cut(s) 377, 380, 417, 501, 504, 561, 707, 925, 990
BmcAI AGTACT 1 cut(s) 891
Bme1390I CCNGG 5 cut(s) 191, 287, 544, 1033, 1220
Bme18I GGWCC 3 cut(s) 1003, 1129, 1226
BmeRI GACNNNNNGTC 3 cut(s) 211, 526, 721
BmgT120I GGNCC 4 cut(s) 128, 1003, 1129, 1226
BmiI GGNNCC 3 cut(s) 462, 558, 1005
BmrFI CCNGG 5 cut(s) 191, 287, 544, 1033, 1220
BmsI GCATC 2 cut(s) 613, 856
Bpu1102I GCTNAGC 1 cut(s) 839
BpuEI CTTGAG 1 cut(s) 293
BpuMI CCSGG 3 cut(s) 287, 544, 1033
BsaAI YACGTR 2 cut(s) 568, 1083
BsaHI GRCGYC 2 cut(s) 557, 806
BsaI GGTCTC 1 cut(s) 456
BsaJI CCNNGG 5 cut(s) 250, 358, 455, 1007, 1026
BsaWI WCCGGW 5 cut(s) 1131, 1147, 1210, 1312, 1333
BsaXI ACNNNNNCTCC 4 cut(s) 436, 466, 1103, 1133
Bsc4I CCNNNNNNNGG 4 cut(s) 149, 190, 256, 1032
Bse118I RCCGGY 6 cut(s) 1000, 1131, 1223, 1312, 1333, 1367
Bse1I ACTGG 1 cut(s) 792
BseBI CCWGG 2 cut(s) 191, 1220
BseDI CCNNGG 5 cut(s) 250, 358, 455, 1007, 1026
BseGI GGATG 4 cut(s) 69, 847, 1104, 1113
BseLI CCNNNNNNNGG 4 cut(s) 149, 190, 256, 1032
BseMII CTCAG 2 cut(s) 853, 953
BseNI ACTGG 1 cut(s) 792
BsePI GCGCGC 1 cut(s) 586
BseRI GAGGAG 4 cut(s) 35, 38, 109, 1127
BseSI GKGCMC 1 cut(s) 544
BseXI GCAGC 4 cut(s) 362, 427, 692, 935
Bsh1236I CGCG 2 cut(s) 527, 588
BshFI GGCC 7 cut(s) 129, 290, 515, 791, 1031, 1223, 1367
BshNI GGYRCC 2 cut(s) 460, 556
BshTI ACCGGT 3 cut(s) 1131, 1312, 1333
BslFI GGGAC 7 cut(s) 472, 756, 812, 989, 1025, 1048, 1066
BslI CCNNNNNNNGG 4 cut(s) 149, 190, 256, 1032
BsmAI GTCTC 3 cut(s) 191, 456, 759
BsmBI CGTCTC 1 cut(s) 191
BsmFI GGGAC 7 cut(s) 472, 756, 812, 989, 1025, 1048, 1066
BsnI GGCC 7 cut(s) 129, 290, 515, 791, 1031, 1223, 1367
Bso31I GGTCTC 1 cut(s) 456
Bsp1286I GDGCHC 1 cut(s) 544
Bsp143I GATC 1 cut(s) 1305
Bsp1720I GCTNAGC 1 cut(s) 839
BspANI GGCC 7 cut(s) 129, 290, 515, 791, 1031, 1223, 1367
BspCNI CTCAG 2 cut(s) 852, 954
BspFNI CGCG 2 cut(s) 527, 588
BspHI TCATGA 1 cut(s) 1318
BspLI GGNNCC 3 cut(s) 462, 558, 1005
BspMAI CTGCAG 1 cut(s) 925
BspT107I GGYRCC 2 cut(s) 460, 556
BspTNI GGTCTC 1 cut(s) 456
BsrBI CCGCTC 2 cut(s) 505, 562
BsrFI RCCGGY 6 cut(s) 1000, 1131, 1223, 1312, 1333, 1367
BsrI ACTGG 1 cut(s) 792
BssAI RCCGGY 6 cut(s) 1000, 1131, 1223, 1312, 1333, 1367
BssECI CCNNGG 5 cut(s) 250, 358, 455, 1007, 1026
BssHII GCGCGC 1 cut(s) 586
BssMI GATC 1 cut(s) 1305
BssNI GRCGYC 2 cut(s) 557, 806
BssT1I CCWWGG 1 cut(s) 455
Bst2UI CCWGG 2 cut(s) 191, 1220
Bst4CI ACNGT 3 cut(s) 185, 398, 1039
Bst6I CTCTTC 3 cut(s) 23, 119, 933
BstACI GRCGYC 2 cut(s) 557, 806
BstBAI YACGTR 2 cut(s) 568, 1083
BstDEI CTNAG 3 cut(s) 839, 962, 1017
BstDSI CCRYGG 1 cut(s) 1007
BstF5I GGATG 4 cut(s) 69, 847, 1104, 1113
BstFNI CGCG 2 cut(s) 527, 588
BstH2I RGCGCY 1 cut(s) 560
BstHHI GCGC 5 cut(s) 420, 527, 559, 588, 590
BstKTI GATC 1 cut(s) 1308
BstMAI GTCTC 3 cut(s) 191, 456, 759
BstMBI GATC 1 cut(s) 1305
BstMWI GCNNNNNNNGC 6 cut(s) 287, 421, 548, 844, 997, 1364
BstNI CCWGG 2 cut(s) 191, 1220
BstNSI RCATGY 2 cut(s) 211, 1025
BstSCI CCNGG 5 cut(s) 189, 285, 542, 1031, 1218
BstSFI CTRYAG 1 cut(s) 921
BstSLI GKGCMC 1 cut(s) 544
BstUI CGCG 2 cut(s) 527, 588
BstV1I GCAGC 4 cut(s) 362, 427, 692, 935
BsuRI GGCC 7 cut(s) 129, 290, 515, 791, 1031, 1223, 1367
BtgI CCRYGG 1 cut(s) 1007
BtsCI GGATG 4 cut(s) 69, 847, 1104, 1113
BtsIMutI CAGTG 1 cut(s) 1168
CciI TCATGA 1 cut(s) 1318
CfoI GCGC 5 cut(s) 420, 527, 559, 588, 590
Cfr10I RCCGGY 6 cut(s) 1000, 1131, 1223, 1312, 1333, 1367
Cfr13I GGNCC 4 cut(s) 128, 1003, 1129, 1226
CpoI CGGWCCG 1 cut(s) 1226
CseI GACGC 2 cut(s) 516, 814
Csp6I GTAC 8 cut(s) 199, 301, 461, 638, 857, 890, 918, 994
CspAI ACCGGT 3 cut(s) 1131, 1312, 1333
CspI CGGWCCG 1 cut(s) 1226
CviAII CATG 8 cut(s) 208, 434, 641, 769, 863, 1022, 1319, 1363
CviQI GTAC 8 cut(s) 199, 301, 461, 638, 857, 890, 918, 994
DdeI CTNAG 3 cut(s) 839, 962, 1017
DinI GGCGCC 1 cut(s) 558
DpnI GATC 1 cut(s) 1307
DpnII GATC 1 cut(s) 1305
DriI GACNNNNNGTC 3 cut(s) 211, 526, 721
EaeI YGGCCR 3 cut(s) 288, 789, 1365
Eam1104I CTCTTC 3 cut(s) 23, 119, 933
Eam1105I GACNNNNNGTC 3 cut(s) 211, 526, 721
EarI CTCTTC 3 cut(s) 23, 119, 933
Eco130I CCWWGG 1 cut(s) 455
Eco147I AGGCCT 1 cut(s) 515
Eco31I GGTCTC 1 cut(s) 456
Eco47I GGWCC 3 cut(s) 1003, 1129, 1226
Eco57I CTGAAG 1 cut(s) 602
EcoRII CCWGG 2 cut(s) 189, 1218
EcoT14I CCWWGG 1 cut(s) 455
EgeI GGCGCC 1 cut(s) 558
EheI GGCGCC 1 cut(s) 558
ErhI CCWWGG 1 cut(s) 455
Esp3I CGTCTC 1 cut(s) 191
FaeI CATG 8 cut(s) 211, 437, 644, 772, 866, 1025, 1322, 1366
FalI AAGNNNNNCTT 4 cut(s) 302, 334, 439, 471
FaqI GGGAC 7 cut(s) 472, 756, 812, 989, 1025, 1048, 1066
FatI CATG 8 cut(s) 207, 433, 640, 768, 862, 1021, 1318, 1362
FauI CCCGC 4 cut(s) 497, 701, 733, 1005
FblI GTMKAC 1 cut(s) 393
Fnu4HI GCNGC 9 cut(s) 376, 379, 416, 500, 503, 560, 706, 924, 989
FokI GGATG 4 cut(s) 56, 834, 1111, 1120
Fsp4HI GCNGC 9 cut(s) 376, 379, 416, 500, 503, 560, 706, 924, 989
GlaI GCGC 5 cut(s) 419, 526, 558, 587, 589
GluI GCNGC 9 cut(s) 376, 379, 416, 500, 503, 560, 706, 924, 989
HaeII RGCGCY 1 cut(s) 560
HaeIII GGCC 7 cut(s) 129, 290, 515, 791, 1031, 1223, 1367
HgaI GACGC 2 cut(s) 516, 814
HhaI GCGC 5 cut(s) 420, 527, 559, 588, 590
Hin1I GRCGYC 2 cut(s) 557, 806
Hin1II CATG 8 cut(s) 211, 437, 644, 772, 866, 1025, 1322, 1366
Hin6I GCGC 5 cut(s) 418, 525, 557, 586, 588
HinP1I GCGC 5 cut(s) 418, 525, 557, 586, 588
HincII GTYRAC 2 cut(s) 394, 411
HindII GTYRAC 2 cut(s) 394, 411
HindIII AAGCTT 2 cut(s) 422, 778
HinfI GANTC 6 cut(s) 644, 980, 1013, 1077, 1169, 1195
HphI GGTGA 5 cut(s) 410, 772, 784, 1192, 1204
Hpy166II GTNNAC 5 cut(s) 201, 216, 394, 411, 874
Hpy188I TCNGA 6 cut(s) 532, 607, 852, 963, 1230, 1266
Hpy188III TCNNGA 4 cut(s) 310, 653, 1319, 1351
Hpy8I GTNNAC 5 cut(s) 201, 216, 394, 411, 874
Hpy99I CGWCG 6 cut(s) 100, 267, 395, 398, 532, 808
HpyAV CCTTC 8 cut(s) 50, 117, 144, 175, 526, 1120, 1240, 1372
HpyCH4III ACNGT 3 cut(s) 185, 398, 1039
HpyCH4IV ACGT 6 cut(s) 265, 294, 390, 567, 727, 1082
HpyCH4V TGCA 4 cut(s) 551, 884, 923, 946
HpyF10VI GCNNNNNNNGC 6 cut(s) 287, 421, 548, 844, 997, 1364
HpyF3I CTNAG 3 cut(s) 839, 962, 1017
HpySE526I ACGT 6 cut(s) 265, 294, 390, 567, 727, 1082
Hsp92I GRCGYC 2 cut(s) 557, 806
Hsp92II CATG 8 cut(s) 211, 437, 644, 772, 866, 1025, 1322, 1366
HspAI GCGC 5 cut(s) 418, 525, 557, 586, 588
KasI GGCGCC 1 cut(s) 556
KpnI GGTACC 1 cut(s) 464
Kzo9I GATC 1 cut(s) 1305
LmnI GCTCC 1 cut(s) 1114
Lsp1109I GCAGC 4 cut(s) 362, 427, 692, 935
LweI GCATC 2 cut(s) 613, 856
MaeII ACGT 6 cut(s) 265, 294, 390, 567, 727, 1082
MaeIII GTNAC 4 cut(s) 274, 713, 723, 1078
MalI GATC 1 cut(s) 1307
MbiI CCGCTC 2 cut(s) 505, 562
MboI GATC 1 cut(s) 1305
MboII GAAGA 4 cut(s) 10, 106, 698, 950
MhlI GDGCHC 1 cut(s) 544
MluCI AATT 1 cut(s) 1205
Mly113I GGCGCC 1 cut(s) 557
MlyI GAGTC 4 cut(s) 989, 1007, 1086, 1204
MmeI TCCRAC 4 cut(s) 97, 268, 348, 510
MslI CAYNNNNRTG 1 cut(s) 206
MspR9I CCNGG 5 cut(s) 191, 287, 544, 1033, 1220
MvaI CCWGG 2 cut(s) 191, 1220
MvnI CGCG 2 cut(s) 527, 588
MwoI GCNNNNNNNGC 6 cut(s) 287, 421, 548, 844, 997, 1364
NarI GGCGCC 1 cut(s) 557
NciI CCSGG 3 cut(s) 287, 544, 1033
NdeII GATC 1 cut(s) 1305
NlaIII CATG 8 cut(s) 211, 437, 644, 772, 866, 1025, 1322, 1366
NlaIV GGNNCC 3 cut(s) 462, 558, 1005
NmeAIII GCCGAG 3 cut(s) 231, 339, 1051
NmuCI GTSAC 4 cut(s) 274, 713, 723, 1078
NspI RCATGY 2 cut(s) 211, 1025
PaeI GCATGC 1 cut(s) 1025
PagI TCATGA 1 cut(s) 1318
PauI GCGCGC 1 cut(s) 586
PceI AGGCCT 1 cut(s) 515
PciI ACATGT 1 cut(s) 207
PfeI GAWTC 2 cut(s) 644, 1169
PfoI TCCNGGA 1 cut(s) 189
PinAI ACCGGT 3 cut(s) 1131, 1312, 1333
PkrI GCNGC 9 cut(s) 377, 380, 417, 501, 504, 561, 707, 925, 990
PleI GAGTC 4 cut(s) 988, 1007, 1085, 1203
PluTI GGCGCC 1 cut(s) 560
PpsI GAGTC 4 cut(s) 988, 1007, 1085, 1203
Ppu21I YACGTR 2 cut(s) 568, 1083
PscI ACATGT 1 cut(s) 207
Psp6I CCWGG 2 cut(s) 189, 1218
PspGI CCWGG 2 cut(s) 189, 1218
PspN4I GGNNCC 3 cut(s) 462, 558, 1005
PspPI GGNCC 4 cut(s) 128, 1003, 1129, 1226
PstI CTGCAG 1 cut(s) 925
PteI GCGCGC 1 cut(s) 586
RsaI GTAC 8 cut(s) 200, 302, 462, 639, 858, 891, 919, 995
RsaNI GTAC 8 cut(s) 199, 301, 461, 638, 857, 890, 918, 994
RseI CAYNNNNRTG 1 cut(s) 206
Rsr2I CGGWCCG 1 cut(s) 1226
RsrII CGGWCCG 1 cut(s) 1226
SalI GTCGAC 1 cut(s) 392
SatI GCNGC 9 cut(s) 376, 379, 416, 500, 503, 560, 706, 924, 989
Sau3AI GATC 1 cut(s) 1305
Sau96I GGNCC 4 cut(s) 128, 1003, 1129, 1226
ScaI AGTACT 1 cut(s) 891
SchI GAGTC 4 cut(s) 989, 1007, 1086, 1204
ScrFI CCNGG 5 cut(s) 191, 287, 544, 1033, 1220
SduI GDGCHC 1 cut(s) 544
SfaNI GCATC 2 cut(s) 613, 856
SfcI CTRYAG 1 cut(s) 921
SfoI GGCGCC 1 cut(s) 558
SgrDI CGTCGACG 1 cut(s) 392
SinI GGWCC 3 cut(s) 1003, 1129, 1226
SmiMI CAYNNNNRTG 1 cut(s) 206
SmlI CTYRAG 1 cut(s) 308
SmoI CTYRAG 1 cut(s) 308
SphI GCATGC 1 cut(s) 1025
Sse9I AATT 1 cut(s) 1205
SseBI AGGCCT 1 cut(s) 515
SspDI GGCGCC 1 cut(s) 556
StuI AGGCCT 1 cut(s) 515
StyD4I CCNGG 5 cut(s) 189, 285, 542, 1031, 1218
StyI CCWWGG 1 cut(s) 455
TaaI ACNGT 3 cut(s) 185, 398, 1039
TaiI ACGT 6 cut(s) 268, 297, 393, 570, 730, 1085
TaqI TCGA 5 cut(s) 98, 393, 480, 519, 1137
TasI AATT 1 cut(s) 1205
TatI WGTACW 2 cut(s) 300, 889
TauI GCSGC 5 cut(s) 381, 502, 505, 562, 991
TfiI GAWTC 2 cut(s) 644, 1169
TscAI CASTG 1 cut(s) 1168
TseFI GTSAC 4 cut(s) 274, 713, 723, 1078
TseI GCWGC 4 cut(s) 375, 415, 705, 923
Tsp45I GTSAC 4 cut(s) 274, 713, 723, 1078
TspDTI ATGAA 8 cut(s) 10, 772, 968, 1182, 1199, 1283, 1307, 1335
TspGWI ACGGA 1 cut(s) 365
TspRI CASTG 1 cut(s) 1168
VpaK11BI GGWCC 3 cut(s) 1003, 1129, 1226
XapI RAATTY 1 cut(s) 1205
XceI RCATGY 2 cut(s) 211, 1025
XmiI GTMKAC 1 cut(s) 393
ZrmI AGTACT 1 cut(s) 891
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.