FvH4_5g08200

exocyst complex component

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0012116
Physical Location & Seq
Reverse (-)
4768726 .. 4772464
3739 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g08200.t2

Sequence Viewer

Length: 1953 bp
ATGACGACGACAACGACGAGCATAGCGGCCGCCGCGGGCGGTGGCCGAGGCGAGGATCGGGTGCTGGCGGCGGCGCAGCATATTGTGAAGAGCCTGGGGAACACGCCGAAGGAGGTGCGGGAGGATATGCTGTTGATCTTCTCCAGCTTTGATAATCGGCTGTCCAATTTGACGAGTATGATCAGCGACGAATCGAAGGCGGAGGACGACCGGTTCGAGGCGGCGGAGAAGGTGATTCTCCGGTGGGAGACGAATCCCGAGGCGACGAGGAGCGCGGTTGTCTGGGAGGAGTCGCCGAACGAGTCGTTGGAGTATTTGTCCGCCGTGGATGAGATCCTCAGCCTCATGGAGGGGCTTTCAGTCGGGTCGGATCACGAGGTTTCGGACCGGGCCGAGAACGCGATCCAAATCGCGATGTCGAGGCTGGAGGACGAGTTCCGTCACATTCTGATCCGGAACACTGTGCCGTTGGACTCCGAGCGCCTCTACGGCTCGATCCGGCGGGTCTCGCTTTCCTTCGCGTCGTCGCAGGACGGCGATTTCGTGGAGGAGTTCGAGAGCTTCGGCGAGATGGACGGCAGGTTCCACGAGCGCGGCGGCAGCTTAGGCGATGATGTGTGTGTTGATTTGATTCATCCGGATGCGGTTGTGGAGTTGAAGGAGATTGCGTACCGGATGATTCGCTCCGGTTACGAGAAGGAGTGTGTTCAGGTGTACAGTAGTGTCCGGCGAGACGCTTTGGATGAGTGTTTGGTGATTCTCGGAGTTGAGAAGCTGAGCATTGAGGAGGTGCAGAAGATTGAGTGGAAGGTGCTCGACGAGAAGATGAAGAAGTGGATACACGCTGTGAAAATCGGGGTTAGAGTTTTGTTAATCGGAGAGAGGAGGCTTTCGGATCAGATTTTCGAGGGGACAGACGAGACTAGGGAGATATGTTTCAATGAGACCACCAAGGGGTGCATTATGCAGCTGTTGAATTTTGGAGAGGCTGTTGCCATTGGGAGAAGGTCTCCCGAAAAGCTGTTTCGGATTCTAGATATGTATGATGTGCTGGCAGATGTTTATCCGGACTTGGAGCAGATGGTGAGTGATGAATTTGTGGTTGCTGAGGCAAAGGGAGTGTTGGATGTACTCGGTGATGCGGCTAGAGGGACCTTTGCTGAGTTTGAGAATGCCGTTCAGGGTGAGGCCAGTAAGAAACCAATGCTGAGTGGAGAGATTCACCCCATTTCGCGGTATGTCATGAACTATGTGAGATTGCTGGTTGATTACAGTGAAACTCTGAATTTTCTTTTGGATACCGGAGATGATGAGTTACAGAGTTTGCCAAATGATGATTTGGGAATAGAAAGTATGTCTCCAATAGGACGTAGGCTTTTGCTGTTGATAAATAATTTGGAGTCCAATCTTGGGGAGAAATCTAAAGTTTATGAGGATGGAGCACTCCAATGTGTGTTTATGATGAATAACATTCAATACATAGTGCAGAAAGTGAAAGATTCTGAGCTTAGAAAGCTCTTGGGAGATAATTGGGTTCGCAAACGCCGTGGCCAGGTGCGCCAGTATGCTACTGGTTATCTTAGAGCTGCTTGGAGCAAGGCACTTTCCTGTTTGAAAGATGAAGGAATTGGCGGCAGCACAAGCAATGCTTCTAAAATGGCTTTGAAGGAAAGGTTTAAGAATTTCAATGCCAACTTTGAAGACCTGTATAGAACCCAGACAGGTTGGAAGGTTCCCGATGCTCAGCTTCGCGAAGAGCTTCGTATATCTATATCAGAGAAGGTTATTCCTGCTTATCGGTCCTTTATGGGGAGGTTTGGGAGTCAGCTAGAGAGTGGAAGGCATGCTGGGAAATATATAAAGTACACTGCAGATGATTTGGAGAGCTATGTGTTGGATTTATTCGAAGGGACACCTTGTGTTCTGCACCATCTTAGAAGAAAAAGTACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0006810 GO:0006887 GO:0008150 GO:0009987 GO:0016192 GO:0032940 GO:0046903 GO:0051179 GO:0051234
KEGG Pathways
Metabolic & Signaling
ko04910 map04910
Pfam Domains
Protein Families
Exo70

Protein Analysis

651

Amino Acids

73.41

Weight (kDa)

4.97

Isoelectric Point (pI)

40.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exo70_N PF20669 72 - 151 4e-15 Exocyst complex component Exo70 N-terminal
Exo70_C PF03081 277 - 632 3.1e-128 Exo70 exocyst complex subunit C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G50380
fragaria_vesca FvH4_5g08200 FvH4_5g08200
malus_domestica MD06G1142600.v1.1 MD14G1157800.v1.1
prunus_persica Prupe.5G151900_v2.0.a1
pyrus_communis pycom06g13240 pycom14g13130
rosa_chinensis RchiOBHm_Chr7g0190311
rosa_laevigata RLG00000004543
rosa_multiflora Rmu_co8286183.1_g000001 Rmu_sc0005487.1_g000003
rosa_roxburghii Rroxscaffold_3G00264740
rosa_rugosa Rorug06G0503900
rosa_samantha Rh7AG109400 Rh7BG111800 Rh7CG114300 Rh7DG112400
rosa_wichuraiana Rw7G009490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 570
AccII CGCG 8 cut(s) 35, 275, 401, 413, 521, 594, 1234, 1752
AccIII TCCGGA 3 cut(s) 453, 637, 1066
AclWI GGATC 7 cut(s) 63, 328, 378, 397, 445, 490, 903
AcoI YGGCCR 3 cut(s) 27, 43, 1549
AcsI RAATTY 4 cut(s) 976, 1094, 1285, 1681
AdeI CACNNNGTG 2 cut(s) 847, 1919
AfaI GTAC 5 cut(s) 671, 716, 1131, 1865, 1948
AfiI CCNNNNNNNGG 8 cut(s) 52, 217, 349, 954, 1233, 1410, 1552, 1809
AgeI ACCGGT 1 cut(s) 210
AgsI TTSAA 8 cut(s) 658, 940, 976, 1475, 1615, 1666, 1687, 1700
AjnI CCWGG 2 cut(s) 93, 1551
AjuI GAANNNNNNNTTGG 4 cut(s) 290, 322, 1277, 1309
AloI GAACNNNNNNTCC 6 cut(s) 197, 229, 419, 451, 566, 598
Alw21I GWGCWC 2 cut(s) 816, 1444
Alw26I GTCTC 7 cut(s) 242, 511, 726, 914, 938, 1014, 1362
AlwI GGATC 7 cut(s) 63, 328, 378, 397, 445, 490, 903
Ama87I CYCGRG 1 cut(s) 257
Aor13HI TCCGGA 3 cut(s) 453, 637, 1066
AoxI GGCC 5 cut(s) 27, 43, 390, 1188, 1549
ApeKI GCWGC 5 cut(s) 76, 600, 967, 1586, 1635
ApoI RAATTY 4 cut(s) 976, 1094, 1285, 1681
ArsI GACNNNNNNTTYG 4 cut(s) 197, 229, 524, 556
AsiGI ACCGGT 1 cut(s) 210
Asp700I GAANNNNTTC 1 cut(s) 1758
AspLEI GCGC 5 cut(s) 76, 275, 483, 594, 1560
AspS9I GGNCC 4 cut(s) 385, 390, 1152, 1800
AsuC2I CCSGG 1 cut(s) 389
AsuHPI GGTGA 6 cut(s) 244, 766, 1096, 1148, 1196, 1214
AsuII TTCGAA 1 cut(s) 1905
AvaI CYCGRG 1 cut(s) 257
AvaII GGWCC 3 cut(s) 385, 1152, 1800
BalI TGGCCA 1 cut(s) 1551
BarI GAAGNNNNNNTAC 1 cut(s) 1930
BauI CACGAG 2 cut(s) 374, 587
BbsI GAAGAC 1 cut(s) 1707
Bbv12I GWGCWC 2 cut(s) 816, 1444
BbvCI CCTCAGC 2 cut(s) 338, 1107
BbvI GCAGC 5 cut(s) 88, 612, 979, 1573, 1647
BccI CCATC 4 cut(s) 565, 1075, 1430, 1938
BceAI ACGGC 7 cut(s) 308, 451, 505, 550, 592, 1160, 1530
BcgI CGANNNNNNTGC 2 cut(s) 97, 131
BciT130I CCWGG 2 cut(s) 95, 1553
BciVI GTATCC 2 cut(s) 831, 1291
BclI TGATCA 1 cut(s) 180
BcnI CCSGG 1 cut(s) 389
BcoDI GTCTC 7 cut(s) 242, 511, 726, 914, 938, 1014, 1362
BfaI CTAG 4 cut(s) 924, 1034, 1146, 1829
BfmI CTRYAG 1 cut(s) 1869
BfoI RGCGCY 1 cut(s) 484
BfuAI ACCTGC 1 cut(s) 570
BfuI GTATCC 2 cut(s) 831, 1291
BglI GCCNNNNNGGC 1 cut(s) 489
BlpI GCTNAGC 2 cut(s) 776, 1743
Bme1390I CCNGG 3 cut(s) 95, 389, 1553
Bme18I GGWCC 3 cut(s) 385, 1152, 1800
BmeT110I CYCGRG 1 cut(s) 257
BmgT120I GGNCC 4 cut(s) 385, 390, 1152, 1800
BmiI GGNNCC 3 cut(s) 584, 1153, 1734
BmrFI CCNGG 3 cut(s) 95, 389, 1553
BmsI GCATC 3 cut(s) 631, 1129, 1729
BpiI GAAGAC 1 cut(s) 1707
BplI GAGNNNNNCTC 2 cut(s) 994, 1026
BpmI CTGGAG 2 cut(s) 127, 446
Bpu10I CCTNAGC 3 cut(s) 338, 604, 1107
Bpu1102I GCTNAGC 2 cut(s) 776, 1743
Bpu14I TTCGAA 1 cut(s) 1905
BpuMI CCSGG 1 cut(s) 389
BsaBI GATNNNNATC 2 cut(s) 407, 1062
BsaI GGTCTC 3 cut(s) 511, 938, 1014
BsaJI CCNNGG 7 cut(s) 33, 46, 94, 258, 324, 951, 1546
BsaWI WCCGGW 8 cut(s) 210, 240, 453, 637, 672, 686, 1066, 1301
BsaXI ACNNNNNCTCC 8 cut(s) 302, 332, 419, 449, 653, 683, 975, 1005
Bsc4I CCNNNNNNNGG 8 cut(s) 52, 217, 349, 954, 1233, 1410, 1552, 1809
Bse118I RCCGGY 1 cut(s) 210
Bse1I ACTGG 3 cut(s) 1191, 1561, 1576
Bse3DI GCAATG 1 cut(s) 1651
Bse8I GATNNNNATC 2 cut(s) 407, 1062
BseAI TCCGGA 3 cut(s) 453, 637, 1066
BseBI CCWGG 2 cut(s) 95, 1553
BseDI CCNNGG 7 cut(s) 33, 46, 94, 258, 324, 951, 1546
BseGI GGATG 7 cut(s) 334, 634, 646, 681, 748, 1132, 1441
BseJI GATNNNNATC 2 cut(s) 407, 1062
BseLI CCNNNNNNNGG 8 cut(s) 52, 217, 349, 954, 1233, 1410, 1552, 1809
BseMI GCAATG 1 cut(s) 1651
BseMII CTCAG 7 cut(s) 352, 767, 1098, 1152, 1199, 1494, 1757
BseNI ACTGG 3 cut(s) 1191, 1561, 1576
BseRI GAGGAG 5 cut(s) 283, 302, 563, 800, 898
BseX3I CGGCCG 1 cut(s) 27
BseXI GCAGC 5 cut(s) 88, 612, 979, 1573, 1647
BseYI CCCAGC 1 cut(s) 1847
BsgI GTGCAG 3 cut(s) 812, 1505, 1910
Bsh1236I CGCG 8 cut(s) 35, 275, 401, 413, 521, 594, 1234, 1752
Bsh1285I CGRYCG 2 cut(s) 30, 211
BshFI GGCC 5 cut(s) 29, 45, 392, 1190, 1551
BshTI ACCGGT 1 cut(s) 210
BsiEI CGRYCG 2 cut(s) 30, 211
BsiHKAI GWGCWC 2 cut(s) 816, 1444
BsiHKCI CYCGRG 1 cut(s) 257
BslFI GGGAC 3 cut(s) 925, 1165, 1924
BslI CCNNNNNNNGG 8 cut(s) 52, 217, 349, 954, 1233, 1410, 1552, 1809
BsmAI GTCTC 7 cut(s) 242, 511, 726, 914, 938, 1014, 1362
BsmBI CGTCTC 2 cut(s) 242, 726
BsmFI GGGAC 3 cut(s) 925, 1165, 1924
BsmI GAATGC 1 cut(s) 1177
BsnI GGCC 5 cut(s) 29, 45, 392, 1190, 1551
Bso31I GGTCTC 3 cut(s) 511, 938, 1014
BsoBI CYCGRG 1 cut(s) 257
Bsp119I TTCGAA 1 cut(s) 1905
Bsp1286I GDGCHC 2 cut(s) 816, 1444
Bsp13I TCCGGA 3 cut(s) 453, 637, 1066
Bsp1407I TGTACA 1 cut(s) 714
Bsp143I GATC 9 cut(s) 55, 135, 180, 333, 370, 402, 450, 495, 895
Bsp1720I GCTNAGC 2 cut(s) 776, 1743
Bsp68I TCGCGA 2 cut(s) 413, 1752
BspANI GGCC 5 cut(s) 29, 45, 392, 1190, 1551
BspCNI CTCAG 7 cut(s) 351, 768, 1099, 1153, 1200, 1495, 1756
BspEI TCCGGA 3 cut(s) 453, 637, 1066
BspFNI CGCG 8 cut(s) 35, 275, 401, 413, 521, 594, 1234, 1752
BspHI TCATGA 1 cut(s) 1242
BspLI GGNNCC 3 cut(s) 584, 1153, 1734
BspMAI CTGCAG 1 cut(s) 1873
BspMI ACCTGC 1 cut(s) 570
BspPI GGATC 7 cut(s) 63, 328, 378, 397, 445, 490, 903
BspQI GCTCTTC 2 cut(s) 83, 1749
BspT104I TTCGAA 1 cut(s) 1905
BspTNI GGTCTC 3 cut(s) 511, 938, 1014
BsrDI GCAATG 1 cut(s) 1651
BsrFI RCCGGY 1 cut(s) 210
BsrGI TGTACA 1 cut(s) 714
BsrI ACTGG 3 cut(s) 1191, 1561, 1576
BssAI RCCGGY 1 cut(s) 210
BssECI CCNNGG 7 cut(s) 33, 46, 94, 258, 324, 951, 1546
BssMI GATC 9 cut(s) 55, 135, 180, 333, 370, 402, 450, 495, 895
BssSI CACGAG 2 cut(s) 374, 587
BssT1I CCWWGG 1 cut(s) 951
Bst2BI CACGAG 2 cut(s) 374, 587
Bst2UI CCWGG 2 cut(s) 95, 1553
Bst4CI ACNGT 3 cut(s) 463, 719, 1274
Bst6I CTCTTC 2 cut(s) 83, 1749
BstAUI TGTACA 1 cut(s) 714
BstBI TTCGAA 1 cut(s) 1905
BstC8I GCNNGC 4 cut(s) 37, 66, 1053, 1845
BstDSI CCRYGG 3 cut(s) 33, 324, 1546
BstENI CCTNNNNNAGG 1 cut(s) 347
BstF5I GGATG 7 cut(s) 334, 634, 646, 681, 748, 1132, 1441
BstFNI CGCG 8 cut(s) 35, 275, 401, 413, 521, 594, 1234, 1752
BstH2I RGCGCY 1 cut(s) 484
BstHHI GCGC 5 cut(s) 76, 275, 483, 594, 1560
BstKTI GATC 9 cut(s) 58, 138, 183, 336, 373, 405, 453, 498, 898
BstMAI GTCTC 7 cut(s) 242, 511, 726, 914, 938, 1014, 1362
BstMBI GATC 9 cut(s) 55, 135, 180, 333, 370, 402, 450, 495, 895
BstMCI CGRYCG 2 cut(s) 30, 211
BstMWI GCNNNNNNNGC 9 cut(s) 32, 398, 489, 508, 600, 606, 1513, 1557, 1641
BstNI CCWGG 2 cut(s) 95, 1553
BstNSI RCATGY 1 cut(s) 1847
BstSCI CCNGG 3 cut(s) 93, 387, 1551
BstSFI CTRYAG 1 cut(s) 1869
BstUI CGCG 8 cut(s) 35, 275, 401, 413, 521, 594, 1234, 1752
BstV1I GCAGC 5 cut(s) 88, 612, 979, 1573, 1647
BstV2I GAAGAC 1 cut(s) 1707
BstX2I RGATCY 1 cut(s) 333
BstYI RGATCY 1 cut(s) 333
BstZI CGGCCG 1 cut(s) 27
BsuI GTATCC 2 cut(s) 831, 1291
BsuRI GGCC 5 cut(s) 29, 45, 392, 1190, 1551
BtgI CCRYGG 3 cut(s) 33, 324, 1546
BtgZI GCGATG 2 cut(s) 428, 624
BtsCI GGATG 7 cut(s) 334, 634, 646, 681, 748, 1132, 1441
BtsI GCAGTG 1 cut(s) 1866
BtsIMutI CAGTG 3 cut(s) 459, 1279, 1866
BtuMI TCGCGA 2 cut(s) 413, 1752
BveI ACCTGC 1 cut(s) 570
Cac8I GCNNGC 4 cut(s) 37, 66, 1053, 1845
CciI TCATGA 1 cut(s) 1242
CciNI GCGGCCGC 1 cut(s) 27
CfoI GCGC 5 cut(s) 76, 275, 483, 594, 1560
Cfr10I RCCGGY 1 cut(s) 210
Cfr13I GGNCC 4 cut(s) 385, 390, 1152, 1800
Cfr42I CCGCGG 1 cut(s) 36
CpoI CGGWCCG 1 cut(s) 385
CseI GACGC 2 cut(s) 510, 743
Csp6I GTAC 5 cut(s) 670, 715, 1130, 1864, 1947
CspAI ACCGGT 1 cut(s) 210
CspCI CAANNNNNGTGG 2 cut(s) 1528, 1563
CspI CGGWCCG 1 cut(s) 385
CviAII CATG 3 cut(s) 346, 1243, 1844
CviQI GTAC 5 cut(s) 670, 715, 1130, 1864, 1947
DpnI GATC 9 cut(s) 57, 137, 182, 335, 372, 404, 452, 497, 897
DpnII GATC 9 cut(s) 55, 135, 180, 333, 370, 402, 450, 495, 895
DraIII CACNNNGTG 2 cut(s) 847, 1919
EaeI YGGCCR 3 cut(s) 27, 43, 1549
EagI CGGCCG 1 cut(s) 27
Eam1104I CTCTTC 2 cut(s) 83, 1749
EarI CTCTTC 2 cut(s) 83, 1749
EciI GGCGGA 3 cut(s) 215, 239, 310
EclXI CGGCCG 1 cut(s) 27
Eco130I CCWWGG 1 cut(s) 951
Eco31I GGTCTC 3 cut(s) 511, 938, 1014
Eco47I GGWCC 3 cut(s) 385, 1152, 1800
Eco52I CGGCCG 1 cut(s) 27
Eco88I CYCGRG 1 cut(s) 257
EcoNI CCTNNNNNAGG 1 cut(s) 347
EcoO109I RGGNCCY 1 cut(s) 1152
EcoRII CCWGG 2 cut(s) 93, 1551
EcoT14I CCWWGG 1 cut(s) 951
ErhI CCWWGG 1 cut(s) 951
Esp3I CGTCTC 2 cut(s) 242, 726
FaeI CATG 3 cut(s) 349, 1246, 1847
FalI AAGNNNNNCTT 2 cut(s) 1633, 1665
FaqI GGGAC 3 cut(s) 925, 1165, 1924
FatI CATG 3 cut(s) 345, 1242, 1843
FauI CCCGC 3 cut(s) 28, 111, 495
FbaI TGATCA 1 cut(s) 180
FokI GGATG 7 cut(s) 341, 621, 653, 688, 755, 1139, 1448
FspBI CTAG 4 cut(s) 924, 1034, 1146, 1829
GlaI GCGC 5 cut(s) 75, 274, 482, 593, 1559
GsaI CCCAGC 1 cut(s) 1851
GsuI CTGGAG 2 cut(s) 127, 446
HaeII RGCGCY 1 cut(s) 484
HaeIII GGCC 5 cut(s) 29, 45, 392, 1190, 1551
HgaI GACGC 2 cut(s) 510, 743
HhaI GCGC 5 cut(s) 76, 275, 483, 594, 1560
Hin1II CATG 3 cut(s) 349, 1246, 1847
Hin6I GCGC 5 cut(s) 74, 273, 481, 592, 1558
HinP1I GCGC 5 cut(s) 74, 273, 481, 592, 1558
HphI GGTGA 6 cut(s) 244, 766, 1096, 1148, 1196, 1214
Hpy166II GTNNAC 2 cut(s) 715, 1866
Hpy8I GTNNAC 2 cut(s) 715, 1866
Hpy99I CGWCG 7 cut(s) 10, 19, 191, 268, 526, 529, 821
HpyCH4III ACNGT 3 cut(s) 463, 719, 1274
HpyCH4IV ACGT 1 cut(s) 1369
HpyCH4V TGCA 6 cut(s) 793, 960, 967, 1486, 1871, 1927
HpyF10VI GCNNNNNNNGC 9 cut(s) 32, 398, 489, 508, 600, 606, 1513, 1557, 1641
HpySE526I ACGT 1 cut(s) 1369
Hsp92II CATG 3 cut(s) 349, 1246, 1847
HspAI GCGC 5 cut(s) 74, 273, 481, 592, 1558
Kpn2I TCCGGA 3 cut(s) 453, 637, 1066
Ksp22I TGATCA 1 cut(s) 180
KspI CCGCGG 1 cut(s) 36
Kzo9I GATC 9 cut(s) 55, 135, 180, 333, 370, 402, 450, 495, 895
LguI GCTCTTC 2 cut(s) 83, 1749
LmnI GCTCC 5 cut(s) 270, 689, 1075, 1439, 1593
Lsp1109I GCAGC 5 cut(s) 88, 612, 979, 1573, 1647
LweI GCATC 3 cut(s) 631, 1129, 1729
MaeI CTAG 4 cut(s) 924, 1034, 1146, 1829
MaeII ACGT 1 cut(s) 1369
MaeIII GTNAC 3 cut(s) 440, 689, 1314
MalI GATC 9 cut(s) 57, 137, 182, 335, 372, 404, 452, 497, 897
MboI GATC 9 cut(s) 55, 135, 180, 333, 370, 402, 450, 495, 895
MboII GAAGA 8 cut(s) 100, 130, 808, 835, 841, 1712, 1766, 1950
MflI RGATCY 1 cut(s) 333
MhlI GDGCHC 2 cut(s) 816, 1444
MlsI TGGCCA 1 cut(s) 1551
MluCI AATT 8 cut(s) 166, 976, 1094, 1285, 1393, 1528, 1626, 1681
MluNI TGGCCA 1 cut(s) 1551
MlyI GAGTC 5 cut(s) 299, 311, 467, 1409, 1831
MmeI TCCRAC 6 cut(s) 288, 348, 450, 1104, 1706, 1875
Mox20I TGGCCA 1 cut(s) 1551
MroI TCCGGA 3 cut(s) 453, 637, 1066
MroXI GAANNNNTTC 1 cut(s) 1758
MscI TGGCCA 1 cut(s) 1551
MseI TTAA 2 cut(s) 872, 1677
MslI CAYNNNNRTG 2 cut(s) 639, 1447
Msp20I TGGCCA 1 cut(s) 1551
MspA1I CMGCKG 2 cut(s) 35, 970
MspR9I CCNGG 3 cut(s) 95, 389, 1553
Mva1269I GAATGC 1 cut(s) 1177
MvaI CCWGG 2 cut(s) 95, 1553
MvnI CGCG 8 cut(s) 35, 275, 401, 413, 521, 594, 1234, 1752
MwoI GCNNNNNNNGC 9 cut(s) 32, 398, 489, 508, 600, 606, 1513, 1557, 1641
NciI CCSGG 1 cut(s) 389
NdeII GATC 9 cut(s) 55, 135, 180, 333, 370, 402, 450, 495, 895
NlaIII CATG 3 cut(s) 349, 1246, 1847
NlaIV GGNNCC 3 cut(s) 584, 1153, 1734
NmeAIII GCCGAG 2 cut(s) 71, 418
NmuCI GTSAC 1 cut(s) 440
NotI GCGGCCGC 1 cut(s) 27
NruI TCGCGA 2 cut(s) 413, 1752
NspI RCATGY 1 cut(s) 1847
NspV TTCGAA 1 cut(s) 1905
PaeI GCATGC 1 cut(s) 1847
PagI TCATGA 1 cut(s) 1242
PciSI GCTCTTC 2 cut(s) 83, 1749
PcsI WCGNNNNNNNCGW 5 cut(s) 11, 14, 213, 540, 1543
PctI GAATGC 1 cut(s) 1177
PdmI GAANNNNTTC 1 cut(s) 1758
PfeI GAWTC 9 cut(s) 191, 235, 253, 631, 679, 757, 1030, 1219, 1499
PinAI ACCGGT 1 cut(s) 210
PleI GAGTC 5 cut(s) 298, 310, 467, 1408, 1830
PpsI GAGTC 5 cut(s) 298, 310, 467, 1408, 1830
PpuMI RGGWCCY 1 cut(s) 1152
Psp5II RGGWCCY 1 cut(s) 1152
Psp6I CCWGG 2 cut(s) 93, 1551
PspFI CCCAGC 1 cut(s) 1847
PspGI CCWGG 2 cut(s) 93, 1551
PspN4I GGNNCC 3 cut(s) 584, 1153, 1734
PspPI GGNCC 4 cut(s) 385, 390, 1152, 1800
PspPPI RGGWCCY 1 cut(s) 1152
PstI CTGCAG 1 cut(s) 1873
PsuI RGATCY 1 cut(s) 333
PvuII CAGCTG 1 cut(s) 970
RruI TCGCGA 2 cut(s) 413, 1752
RsaI GTAC 5 cut(s) 671, 716, 1131, 1865, 1948
RsaNI GTAC 5 cut(s) 670, 715, 1130, 1864, 1947
RseI CAYNNNNRTG 2 cut(s) 639, 1447
Rsr2I CGGWCCG 1 cut(s) 385
RsrII CGGWCCG 1 cut(s) 385
SacII CCGCGG 1 cut(s) 36
SapI GCTCTTC 2 cut(s) 83, 1749
SaqAI TTAA 2 cut(s) 872, 1677
Sau3AI GATC 9 cut(s) 55, 135, 180, 333, 370, 402, 450, 495, 895
Sau96I GGNCC 4 cut(s) 385, 390, 1152, 1800
SchI GAGTC 5 cut(s) 299, 311, 467, 1409, 1831
ScrFI CCNGG 3 cut(s) 95, 389, 1553
SduI GDGCHC 2 cut(s) 816, 1444
SfaNI GCATC 3 cut(s) 631, 1129, 1729
SfcI CTRYAG 1 cut(s) 1869
Sfr303I CCGCGG 1 cut(s) 36
SfuI TTCGAA 1 cut(s) 1905
SgrBI CCGCGG 1 cut(s) 36
SinI GGWCC 3 cut(s) 385, 1152, 1800
SmiMI CAYNNNNRTG 2 cut(s) 639, 1447
SphI GCATGC 1 cut(s) 1847
Sse9I AATT 8 cut(s) 166, 976, 1094, 1285, 1393, 1528, 1626, 1681
SspMI CTAG 4 cut(s) 924, 1034, 1146, 1829
StyD4I CCNGG 3 cut(s) 93, 387, 1551
StyI CCWWGG 1 cut(s) 951
TaaI ACNGT 3 cut(s) 463, 719, 1274
TaiI ACGT 1 cut(s) 1372
TaqI TCGA 8 cut(s) 194, 216, 419, 494, 555, 816, 906, 1905
TaqII GACCGA 1 cut(s) 1788
TasI AATT 8 cut(s) 166, 976, 1094, 1285, 1393, 1528, 1626, 1681
TatI WGTACW 4 cut(s) 714, 1129, 1863, 1946
TfiI GAWTC 9 cut(s) 191, 235, 253, 631, 679, 757, 1030, 1219, 1499
Tru1I TTAA 2 cut(s) 872, 1677
Tru9I TTAA 2 cut(s) 872, 1677
TscAI CASTG 3 cut(s) 466, 1279, 1873
TseFI GTSAC 1 cut(s) 440
TseI GCWGC 5 cut(s) 76, 600, 967, 1586, 1635
Tsp45I GTSAC 1 cut(s) 440
TspDTI ATGAA 6 cut(s) 623, 842, 1107, 1259, 1478, 1635
TspGWI ACGGA 1 cut(s) 428
TspRI CASTG 3 cut(s) 466, 1279, 1873
VpaK11BI GGWCC 3 cut(s) 385, 1152, 1800
XagI CCTNNNNNAGG 1 cut(s) 347
XapI RAATTY 4 cut(s) 976, 1094, 1285, 1681
XbaI TCTAGA 1 cut(s) 1033
XceI RCATGY 1 cut(s) 1847
XcmI CCANNNNNNNNNTGG 1 cut(s) 1568
XmnI GAANNNNTTC 1 cut(s) 1758
XspI CTAG 4 cut(s) 924, 1034, 1146, 1829
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.