MD06G1142600.v1.1

exocyst complex component

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
OG0012116
Physical Location & Seq
Forward (+)
28629188 .. 28631137
1950 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1142600.v1.1.491

Sequence Viewer

Length: 1950 bp
ATGACCACCACCACCACCGGCATAGGCGGTGGCGGAGAGGACCGGGTCCTCGCCACGGCTCAGCAGATCGTCAAGAGCCTCAACACCCCCAAGGAGGTCCGCGAGGACATGCTTCTGATCTTCTCGAGCTTCGACAATAGATTATCTAACATCACCAATTTGATCAACGGCGAGGATTCCAAGGCCGACGAGGACCGGTTCGGGGAAGCCGAGAAGGTGATTTTCCGGTGGGAGTCCAATTCCGAAGCTCACAGAAACTCGGTCCCGTGGGAGGAGTCGCCGGTCGAGGCCGCCGAGTATTTGGCCGCCGTCGATGAGATTCTCACGCACATGGAGGGGCTTTCGGTCCGGTCCGATAACGAATTGGTGGACCGGGTCGAGAACGCGCTCCAAATCGCGATGACTCGGCTGGAGGACGAGTTCCGCCACATTCTGATCAGGAACACGGTGCCTCTCGACTCCGATCGACTCTACGGCTCGATCCGGAGAGTGTCGCTGTCGTTCGCGTCAAACGACGGCGAAATCTACGATGAATTCGAGAGTTTCGGCGAGGAGGACCGCGACGCGGGCAGGTTCCACGAGCGCGGCGGCAGCCTAGGCGATACAGACGTCGATTTGATACATCCTGACGCCGTCGTGGAGCTGAAGGAGATCGCCGAGCGTATGATTCGGTCCGGCTACGAAAAGGAGTGTGTGCAGGTGTATAGCAGCGTCAGGCGCGACGCTTTGGACGAGTGTTTGGTGATTCTCGGTGTCGAGAAGCTGAGCATTGAGGAGGTGCAGAAGATTGAGTGGAAGAGTTTGGATGAGAAGATGAAGAAGTGGATACAAGCTGTGAAAATCGGTGTTAGGGTTTTGATAAACGGCGAAAGGAGGCTCTGTGATCAGATTTTTGAAGGGATTGATGAGACTAGGGAGTGTTGCTTCATTGACACTTCCAAGGGGTGTATTATGCAGCTGTTGAATTTCGGAGAGGCGGTCGCCATTGGTCGAAGGTCGCCCGAGAAGCTGTTTCGGATACTTGACATGTACGATGCTGTGGCGGATGTGTTGCCGGACTTGCAGCAAATGATGACAGATGAATATGTGGTTGGTGAGGCCAGGGGAGTGTTGGATGCGCTCGGTGATGCGGCGAGAGGGACGTTTGCTGAGTTTGAAAATGCAGTTCAGACTGAGGCCAGTAAGAAACCAATGCTAAGCGGCGAGATTCACCCGCTTACTCGGTATGTCATGAACTATGTTAGATTGTTGGTTGACTATAGTGATACCCTCAATTCGCTTTTGGATACCGGTGAGGAAGAGTTGCAAAGGTTGCAAGGATTGCCAAATGATGATTTGGGTATAGACAGCATGTCTCCTATAGGCCATAGGTTGTTGTTGTTGATTTCAAATTTGGAAGCCAATCTCGAGGAGAAGTCTAGGGTTTATGATGATGGAGCAATGCAGAGTGTGTTTTTGATGAATAACATTCAGTACATAGTGCAGAAAGTGAAGGATTCTGAGATTAGAAAGCTCTTGGGAGACCAATGGGTTCGCAAGCGTCGTGGTCAGGTACGCCAGTATGCTACTGGGTATCTAAGAGCTGCTTGGAGCAAGGCCCTCTCTTGTTTGAAAGACGAGGGGATTGGCGGGAGCACGAGTAATGCTTCGAGGATGGCTTTGAAGGAGAGGTTTAAGAACTTCAATGCACACTTTGAAGAAATCTATCGGACCCAGACAGCTTGGAAGGTCCCGGATGCTCAACTTCGGGAGGAGCTTCGGATATCTATATCGGAGAAGGTGATCCCAGCTTACAGATCGTTTATGGGGAGGTTTGGGAGTCAGCTGGAGAGTGGAAGGCATGCCGGGAAGTATATAAAATACACAGCGGATGATTTGGAGAGCTACGTGTTGGATTTGTTTGAAGGGACACCGTGTGTTCTGCACCATCTGAGAAGAAAAAGTACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0006810 GO:0006887 GO:0008150 GO:0009987 GO:0016192 GO:0032940 GO:0046903 GO:0051179 GO:0051234
KEGG Pathways
Metabolic & Signaling
ko04910 map04910
Pfam Domains
Protein Families
Exo70

Protein Analysis

650

Amino Acids

73.67

Weight (kDa)

4.95

Isoelectric Point (pI)

40.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exo70_N PF20669 69 - 146 9.9e-14 Exocyst complex component Exo70 N-terminal
Exo70_C PF03081 273 - 631 9.6e-131 Exo70 exocyst complex subunit C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G50380
fragaria_vesca FvH4_5g08200 FvH4_5g08200
malus_domestica MD06G1142600.v1.1 MD14G1157800.v1.1
prunus_persica Prupe.5G151900_v2.0.a1
pyrus_communis pycom06g13240 pycom14g13130
rosa_chinensis RchiOBHm_Chr7g0190311
rosa_laevigata RLG00000004543
rosa_multiflora Rmu_co8286183.1_g000001 Rmu_sc0005487.1_g000003
rosa_roxburghii Rroxscaffold_3G00264740
rosa_rugosa Rorug06G0503900
rosa_samantha Rh7AG109400 Rh7BG111800 Rh7CG114300 Rh7DG112400
rosa_wichuraiana Rw7G009490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 688
AatII GACGTC 1 cut(s) 612
Acc36I ACCTGC 2 cut(s) 561, 688
AccB1I GGYRCC 1 cut(s) 448
AccII CGCG 8 cut(s) 102, 386, 398, 506, 561, 566, 585, 720
AccIII TCCGGA 1 cut(s) 483
AclWI GGATC 2 cut(s) 475, 1777
AcoI YGGCCR 1 cut(s) 303
AcsI RAATTY 3 cut(s) 533, 964, 1390
AcuI CTGAAG 1 cut(s) 665
AcyI GRCGYC 2 cut(s) 609, 630
AdeI CACNNNGTG 1 cut(s) 1916
AfaI GTAC 4 cut(s) 1031, 1475, 1554, 1945
AfiI CCNNNNNNNGG 5 cut(s) 55, 94, 202, 271, 565
AflIII ACRYGT 2 cut(s) 1026, 1887
AgeI ACCGGT 2 cut(s) 195, 1289
AgsI TTSAA 9 cut(s) 896, 964, 1157, 1389, 1612, 1663, 1684, 1697, 1904
AhdI GACNNNNNGTC 1 cut(s) 1351
AjnI CCWGG 1 cut(s) 1100
AjuI GAANNNNNNNTTGG 2 cut(s) 1074, 1106
AloI GAACNNNNNNTCC 2 cut(s) 404, 436
Alw21I GWGCWC 1 cut(s) 1637
Alw26I GTCTC 3 cut(s) 902, 1359, 1515
AlwI GGATC 2 cut(s) 475, 1777
Ama87I CYCGRG 3 cut(s) 124, 1001, 1406
Aor13HI TCCGGA 1 cut(s) 483
AoxI GGCC 7 cut(s) 183, 288, 303, 1098, 1176, 1363, 1596
ApeKI GCWGC 5 cut(s) 591, 708, 955, 1063, 1583
ApoI RAATTY 3 cut(s) 533, 964, 1390
AsiGI ACCGGT 2 cut(s) 195, 1289
AspA2I CCTAGG 1 cut(s) 595
AspLEI GCGC 4 cut(s) 388, 585, 720, 1120
AsuC2I CCSGG 4 cut(s) 44, 374, 1733, 1846
AsuHPI GGTGA 8 cut(s) 145, 229, 754, 1106, 1136, 1202, 1304, 1792
AvaI CYCGRG 3 cut(s) 124, 1001, 1406
AvrII CCTAGG 1 cut(s) 595
BaeI ACNNNNGTAYC 4 cut(s) 594, 627, 1544, 1577
BanI GGYRCC 1 cut(s) 448
BarI GAAGNNNNNNTAC 1 cut(s) 1927
BauI CACGAG 2 cut(s) 578, 1636
Bbv12I GWGCWC 1 cut(s) 1637
BbvI GCAGC 5 cut(s) 603, 720, 967, 1075, 1570
BccI CCATC 3 cut(s) 1427, 1648, 1935
BceAI ACGGC 7 cut(s) 72, 184, 293, 490, 532, 617, 880
BciT130I CCWGG 1 cut(s) 1102
BciVI GTATCC 3 cut(s) 819, 1011, 1279
BclI TGATCA 3 cut(s) 162, 435, 883
BcnI CCSGG 4 cut(s) 44, 374, 1733, 1846
BcoDI GTCTC 3 cut(s) 902, 1359, 1515
BfaI CTAG 3 cut(s) 596, 912, 1419
BfmI CTRYAG 2 cut(s) 1258, 1359
BfuAI ACCTGC 2 cut(s) 561, 688
BfuI GTATCC 3 cut(s) 819, 1011, 1279
BlnI CCTAGG 1 cut(s) 595
BlpI GCTNAGC 3 cut(s) 60, 764, 1196
Bme1390I CCNGG 5 cut(s) 44, 374, 1102, 1733, 1846
BmeRI GACNNNNNGTC 1 cut(s) 1351
BmeT110I CYCGRG 3 cut(s) 124, 1001, 1406
BmiI GGNNCC 6 cut(s) 47, 264, 450, 575, 1712, 1731
BmrFI CCNGG 5 cut(s) 44, 374, 1102, 1733, 1846
BmrI ACTGGG 1 cut(s) 1578
BmsI GCATC 4 cut(s) 1024, 1105, 1117, 1726
BmuI ACTGGG 1 cut(s) 1578
BpmI CTGGAG 2 cut(s) 431, 1847
Bpu1102I GCTNAGC 3 cut(s) 60, 764, 1196
BpuMI CCSGG 4 cut(s) 44, 374, 1733, 1846
BsaAI YACGTR 1 cut(s) 1888
BsaHI GRCGYC 2 cut(s) 609, 630
BsaI GGTCTC 1 cut(s) 1515
BsaJI CCNNGG 7 cut(s) 54, 90, 180, 266, 595, 939, 1101
BsaWI WCCGGW 5 cut(s) 195, 225, 348, 483, 1289
BsaXI ACNNNNNCTCC 8 cut(s) 404, 434, 865, 895, 963, 993, 1624, 1654
Bsc4I CCNNNNNNNGG 5 cut(s) 55, 94, 202, 271, 565
Bse118I RCCGGY 4 cut(s) 17, 195, 280, 1289
Bse1I ACTGG 3 cut(s) 1179, 1558, 1573
Bse3DI GCAATG 1 cut(s) 1446
BseAI TCCGGA 1 cut(s) 483
BseBI CCWGG 1 cut(s) 1102
BseDI CCNNGG 7 cut(s) 54, 90, 180, 266, 595, 939, 1101
BseGI GGATG 7 cut(s) 622, 811, 1051, 1120, 1659, 1741, 1876
BseLI CCNNNNNNNGG 5 cut(s) 55, 94, 202, 271, 565
BseMI GCAATG 1 cut(s) 1446
BseMII CTCAG 6 cut(s) 74, 755, 1140, 1164, 1491, 1922
BseNI ACTGG 3 cut(s) 1179, 1558, 1573
BseRI GAGGAG 5 cut(s) 287, 566, 788, 1424, 1766
BseXI GCAGC 5 cut(s) 603, 720, 967, 1075, 1570
BseYI CCCAGC 1 cut(s) 1786
BsgI GTGCAG 4 cut(s) 716, 800, 1502, 1907
Bsh1236I CGCG 8 cut(s) 102, 386, 398, 506, 561, 566, 585, 720
Bsh1285I CGRYCG 3 cut(s) 285, 466, 981
BshFI GGCC 7 cut(s) 185, 290, 305, 1100, 1178, 1365, 1598
BshNI GGYRCC 1 cut(s) 448
BshTI ACCGGT 2 cut(s) 195, 1289
BsiEI CGRYCG 3 cut(s) 285, 466, 981
BsiHKAI GWGCWC 1 cut(s) 1637
BsiHKCI CYCGRG 3 cut(s) 124, 1001, 1406
BslFI GGGAC 4 cut(s) 248, 1153, 1715, 1921
BslI CCNNNNNNNGG 5 cut(s) 55, 94, 202, 271, 565
BsmAI GTCTC 3 cut(s) 902, 1359, 1515
BsmFI GGGAC 4 cut(s) 248, 1153, 1715, 1921
BsnI GGCC 7 cut(s) 185, 290, 305, 1100, 1178, 1365, 1598
Bso31I GGTCTC 1 cut(s) 1515
BsoBI CYCGRG 3 cut(s) 124, 1001, 1406
Bsp1286I GDGCHC 1 cut(s) 1637
Bsp13I TCCGGA 1 cut(s) 483
Bsp1720I GCTNAGC 3 cut(s) 60, 764, 1196
Bsp68I TCGCGA 1 cut(s) 398
BspANI GGCC 7 cut(s) 185, 290, 305, 1100, 1178, 1365, 1598
BspCNI CTCAG 6 cut(s) 73, 756, 1141, 1165, 1492, 1923
BspEI TCCGGA 1 cut(s) 483
BspFNI CGCG 8 cut(s) 102, 386, 398, 506, 561, 566, 585, 720
BspHI TCATGA 1 cut(s) 1230
BspLI GGNNCC 6 cut(s) 47, 264, 450, 575, 1712, 1731
BspMI ACCTGC 2 cut(s) 561, 688
BspPI GGATC 2 cut(s) 475, 1777
BspT107I GGYRCC 1 cut(s) 448
BspTNI GGTCTC 1 cut(s) 1515
BsrDI GCAATG 1 cut(s) 1446
BsrFI RCCGGY 4 cut(s) 17, 195, 280, 1289
BsrI ACTGG 3 cut(s) 1179, 1558, 1573
BssAI RCCGGY 4 cut(s) 17, 195, 280, 1289
BssECI CCNNGG 7 cut(s) 54, 90, 180, 266, 595, 939, 1101
BssNI GRCGYC 2 cut(s) 609, 630
BssSI CACGAG 2 cut(s) 578, 1636
BssT1I CCWWGG 4 cut(s) 90, 180, 595, 939
Bst2BI CACGAG 2 cut(s) 578, 1636
Bst2UI CCWGG 1 cut(s) 1102
Bst4CI ACNGT 2 cut(s) 448, 1914
Bst6I CTCTTC 2 cut(s) 791, 1293
BstACI GRCGYC 2 cut(s) 609, 630
BstAPI GCANNNNNTGC 2 cut(s) 1312, 1321
BstBAI YACGTR 1 cut(s) 1888
BstC8I GCNNGC 3 cut(s) 568, 1538, 1842
BstDEI CTNAG 8 cut(s) 60, 764, 1149, 1173, 1196, 1500, 1577, 1931
BstDSI CCRYGG 2 cut(s) 54, 266
BstF5I GGATG 7 cut(s) 622, 811, 1051, 1120, 1659, 1741, 1876
BstFNI CGCG 8 cut(s) 102, 386, 398, 506, 561, 566, 585, 720
BstHHI GCGC 4 cut(s) 388, 585, 720, 1120
BstMAI GTCTC 3 cut(s) 902, 1359, 1515
BstMCI CGRYCG 3 cut(s) 285, 466, 981
BstMWI GCNNNNNNNGC 8 cut(s) 567, 591, 597, 717, 1006, 1060, 1312, 1321
BstNI CCWGG 1 cut(s) 1102
BstNSI RCATGY 4 cut(s) 112, 1030, 1354, 1844
BstSCI CCNGG 5 cut(s) 42, 372, 1100, 1731, 1844
BstSFI CTRYAG 2 cut(s) 1258, 1359
BstUI CGCG 8 cut(s) 102, 386, 398, 506, 561, 566, 585, 720
BstV1I GCAGC 5 cut(s) 603, 720, 967, 1075, 1570
BsuI GTATCC 3 cut(s) 819, 1011, 1279
BsuRI GGCC 7 cut(s) 185, 290, 305, 1100, 1178, 1365, 1598
BtgI CCRYGG 2 cut(s) 54, 266
BtgZI GCGATG 1 cut(s) 413
BtsCI GGATG 7 cut(s) 622, 811, 1051, 1120, 1659, 1741, 1876
BtuMI TCGCGA 1 cut(s) 398
BveI ACCTGC 2 cut(s) 561, 688
Cac8I GCNNGC 3 cut(s) 568, 1538, 1842
CciI TCATGA 1 cut(s) 1230
CfoI GCGC 4 cut(s) 388, 585, 720, 1120
Cfr10I RCCGGY 4 cut(s) 17, 195, 280, 1289
CpoI CGGWCCG 3 cut(s) 346, 351, 672
CseI GACGC 6 cut(s) 495, 572, 638, 700, 731, 1529
Csp6I GTAC 4 cut(s) 1030, 1474, 1553, 1944
CspAI ACCGGT 2 cut(s) 195, 1289
CspCI CAANNNNNGTGG 2 cut(s) 1525, 1560
CspI CGGWCCG 3 cut(s) 346, 351, 672
CviAII CATG 6 cut(s) 109, 331, 1027, 1231, 1351, 1841
CviQI GTAC 4 cut(s) 1030, 1474, 1553, 1944
DdeI CTNAG 8 cut(s) 60, 764, 1149, 1173, 1196, 1500, 1577, 1931
DraIII CACNNNGTG 1 cut(s) 1916
DriI GACNNNNNGTC 1 cut(s) 1351
EaeI YGGCCR 1 cut(s) 303
Eam1104I CTCTTC 2 cut(s) 791, 1293
Eam1105I GACNNNNNGTC 1 cut(s) 1351
EarI CTCTTC 2 cut(s) 791, 1293
EciI GGCGGA 3 cut(s) 48, 413, 1058
Eco130I CCWWGG 4 cut(s) 90, 180, 595, 939
Eco31I GGTCTC 1 cut(s) 1515
Eco32I GATATC 1 cut(s) 1764
Eco57I CTGAAG 1 cut(s) 665
Eco88I CYCGRG 3 cut(s) 124, 1001, 1406
EcoO109I RGGNCCY 3 cut(s) 46, 1597, 1729
EcoRI GAATTC 1 cut(s) 533
EcoRII CCWGG 1 cut(s) 1100
EcoRV GATATC 1 cut(s) 1764
EcoT14I CCWWGG 4 cut(s) 90, 180, 595, 939
ErhI CCWWGG 4 cut(s) 90, 180, 595, 939
FaeI CATG 6 cut(s) 112, 334, 1030, 1234, 1354, 1844
FalI AAGNNNNNCTT 2 cut(s) 1570, 1602
FaqI GGGAC 4 cut(s) 248, 1153, 1715, 1921
FatI CATG 6 cut(s) 108, 330, 1026, 1230, 1350, 1840
FauI CCCGC 3 cut(s) 559, 1221, 1622
FbaI TGATCA 3 cut(s) 162, 435, 883
FokI GGATG 7 cut(s) 609, 818, 1058, 1127, 1666, 1748, 1883
FspBI CTAG 3 cut(s) 596, 912, 1419
GlaI GCGC 4 cut(s) 387, 584, 719, 1119
GsaI CCCAGC 1 cut(s) 1790
GsuI CTGGAG 2 cut(s) 431, 1847
HaeIII GGCC 7 cut(s) 185, 290, 305, 1100, 1178, 1365, 1598
HgaI GACGC 6 cut(s) 495, 572, 638, 700, 731, 1529
HhaI GCGC 4 cut(s) 388, 585, 720, 1120
Hin1I GRCGYC 2 cut(s) 609, 630
Hin1II CATG 6 cut(s) 112, 334, 1030, 1234, 1354, 1844
Hin6I GCGC 4 cut(s) 386, 583, 718, 1118
HinP1I GCGC 4 cut(s) 386, 583, 718, 1118
HincII GTYRAC 1 cut(s) 1255
HindII GTYRAC 1 cut(s) 1255
HphI GGTGA 8 cut(s) 145, 229, 754, 1106, 1136, 1202, 1304, 1792
Hpy166II GTNNAC 2 cut(s) 370, 1255
Hpy8I GTNNAC 2 cut(s) 370, 1255
Hpy99I CGWCG 8 cut(s) 191, 314, 518, 566, 614, 638, 725, 1545
HpyCH4III ACNGT 2 cut(s) 448, 1914
HpyCH4IV ACGT 3 cut(s) 609, 1142, 1887
HpyF10VI GCNNNNNNNGC 8 cut(s) 567, 591, 597, 717, 1006, 1060, 1312, 1321
HpyF3I CTNAG 8 cut(s) 60, 764, 1149, 1173, 1196, 1500, 1577, 1931
HpySE526I ACGT 3 cut(s) 609, 1142, 1887
Hsp92I GRCGYC 2 cut(s) 609, 630
Hsp92II CATG 6 cut(s) 112, 334, 1030, 1234, 1354, 1844
HspAI GCGC 4 cut(s) 386, 583, 718, 1118
Kpn2I TCCGGA 1 cut(s) 483
Ksp22I TGATCA 3 cut(s) 162, 435, 883
LmnI GCTCC 6 cut(s) 393, 640, 1436, 1590, 1632, 1753
Lsp1109I GCAGC 5 cut(s) 603, 720, 967, 1075, 1570
LweI GCATC 4 cut(s) 1024, 1105, 1117, 1726
MaeI CTAG 3 cut(s) 596, 912, 1419
MaeII ACGT 3 cut(s) 609, 1142, 1887
MboII GAAGA 8 cut(s) 112, 796, 808, 823, 829, 1310, 1709, 1947
MhlI GDGCHC 1 cut(s) 1637
MluCI AATT 7 cut(s) 157, 238, 362, 533, 964, 1273, 1390
MlyI GAGTC 6 cut(s) 242, 284, 397, 452, 462, 1828
MmeI TCCRAC 2 cut(s) 1092, 1872
MroI TCCGGA 1 cut(s) 483
MseI TTAA 1 cut(s) 1674
MslI CAYNNNNRTG 1 cut(s) 329
MspA1I CMGCKG 3 cut(s) 958, 1825, 1868
MspR9I CCNGG 5 cut(s) 44, 374, 1102, 1733, 1846
MvaI CCWGG 1 cut(s) 1102
MvnI CGCG 8 cut(s) 102, 386, 398, 506, 561, 566, 585, 720
MwoI GCNNNNNNNGC 8 cut(s) 567, 591, 597, 717, 1006, 1060, 1312, 1321
NciI CCSGG 4 cut(s) 44, 374, 1733, 1846
NlaIII CATG 6 cut(s) 112, 334, 1030, 1234, 1354, 1844
NlaIV GGNNCC 6 cut(s) 47, 264, 450, 575, 1712, 1731
NmeAIII GCCGAG 4 cut(s) 235, 319, 385, 682
NruI TCGCGA 1 cut(s) 398
NspI RCATGY 4 cut(s) 112, 1030, 1354, 1844
PaeI GCATGC 1 cut(s) 1844
PaeR7I CTCGAG 2 cut(s) 124, 1406
PagI TCATGA 1 cut(s) 1230
PaqCI CACCTGC 1 cut(s) 688
PciI ACATGT 1 cut(s) 1026
PcsI WCGNNNNNNNCGW 6 cut(s) 207, 291, 510, 534, 729, 1540
PfeI GAWTC 6 cut(s) 176, 319, 667, 745, 1207, 1496
PflFI GACNNNGTC 3 cut(s) 44, 374, 632
PfoI TCCNGGA 1 cut(s) 1731
PinAI ACCGGT 2 cut(s) 195, 1289
Ple19I CGATCG 1 cut(s) 466
PleI GAGTC 6 cut(s) 241, 283, 397, 452, 462, 1827
PpsI GAGTC 6 cut(s) 241, 283, 397, 452, 462, 1827
Ppu21I YACGTR 1 cut(s) 1888
PpuMI RGGWCCY 2 cut(s) 46, 1729
PscI ACATGT 1 cut(s) 1026
Psp5II RGGWCCY 2 cut(s) 46, 1729
Psp6I CCWGG 1 cut(s) 1100
PspFI CCCAGC 1 cut(s) 1786
PspGI CCWGG 1 cut(s) 1100
PspN4I GGNNCC 6 cut(s) 47, 264, 450, 575, 1712, 1731
PspPPI RGGWCCY 2 cut(s) 46, 1729
PsyI GACNNNGTC 3 cut(s) 44, 374, 632
PvuI CGATCG 1 cut(s) 466
PvuII CAGCTG 2 cut(s) 958, 1825
RruI TCGCGA 1 cut(s) 398
RsaI GTAC 4 cut(s) 1031, 1475, 1554, 1945
RsaNI GTAC 4 cut(s) 1030, 1474, 1553, 1944
RseI CAYNNNNRTG 1 cut(s) 329
Rsr2I CGGWCCG 3 cut(s) 346, 351, 672
RsrII CGGWCCG 3 cut(s) 346, 351, 672
SaqAI TTAA 1 cut(s) 1674
SchI GAGTC 6 cut(s) 242, 284, 397, 452, 462, 1828
ScrFI CCNGG 5 cut(s) 44, 374, 1102, 1733, 1846
SduI GDGCHC 1 cut(s) 1637
SfaNI GCATC 4 cut(s) 1024, 1105, 1117, 1726
SfcI CTRYAG 2 cut(s) 1258, 1359
Sfr274I CTCGAG 2 cut(s) 124, 1406
SlaI CTCGAG 2 cut(s) 124, 1406
SmiMI CAYNNNNRTG 1 cut(s) 329
SmlI CTYRAG 2 cut(s) 124, 1406
SmoI CTYRAG 2 cut(s) 124, 1406
SphI GCATGC 1 cut(s) 1844
Sse9I AATT 7 cut(s) 157, 238, 362, 533, 964, 1273, 1390
SspMI CTAG 3 cut(s) 596, 912, 1419
StyD4I CCNGG 5 cut(s) 42, 372, 1100, 1731, 1844
StyI CCWWGG 4 cut(s) 90, 180, 595, 939
TaaI ACNGT 2 cut(s) 448, 1914
TaiI ACGT 3 cut(s) 612, 1145, 1890
TaqII GACCGA 3 cut(s) 250, 334, 660
TasI AATT 7 cut(s) 157, 238, 362, 533, 964, 1273, 1390
TatI WGTACW 2 cut(s) 1473, 1943
TauI GCSGC 6 cut(s) 293, 308, 588, 591, 1133, 1203
TfiI GAWTC 6 cut(s) 176, 319, 667, 745, 1207, 1496
Tru1I TTAA 1 cut(s) 1674
Tru9I TTAA 1 cut(s) 1674
TseI GCWGC 5 cut(s) 591, 708, 955, 1063, 1583
TspDTI ATGAA 6 cut(s) 546, 830, 916, 1095, 1247, 1475
Tth111I GACNNNGTC 3 cut(s) 44, 374, 632
XapI RAATTY 3 cut(s) 533, 964, 1390
XceI RCATGY 4 cut(s) 112, 1030, 1354, 1844
XcmI CCANNNNNNNNNTGG 2 cut(s) 1108, 1565
XhoI CTCGAG 2 cut(s) 124, 1406
XmaJI CCTAGG 1 cut(s) 595
XspI CTAG 3 cut(s) 596, 912, 1419
ZraI GACGTC 1 cut(s) 610
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.