Rroxscaffold_3G00264740

exocyst complex component

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0012116
Physical Location & Seq
Reverse (-)
58271009 .. 58272967
1959 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00264740.1

Sequence Viewer

Length: 1959 bp
ATGACGACCACGACGACGAGCATAGCGGCCGCCGCGGGCGGTGGTGGAGGCGAGGATCGGGTGCTGGCGGCGGCGCAGCATATCGTGAAGAGCCTGGGGAACACTCCGAAGGAGGTGAGGGAGGATATGCTGTTGATCTTCTCCAGCTTTGATAACCGGCTCTCGAATTTGACGAGTATGATCAGCGACGAATCGAAGGCGGACGACGACCGATTCGAGGCCGCCGAGAAGGTGATTTTCCGGTGGGAGGCGAATCACGACGCGATGAGGAGCGCCGTGCCTTGGGAGGAGTCGCCGAACGAGTCGGCGGAGTATTTGTTGGCCGTGGACGAGATCCTCAGCCTCATGGAGGGGTTATCGGTCGGGTCGGATCATGAGATTTCGGACCGGGCCGAGAACGCCATCCAAATCGCGATGTCGAGGCTGGAGGACGAGTTCCGCCACATTCTGATCCGGAACACCGTCCCGCTCGACTCCGAGCGCCTCTACGGCTCGATCCGGCGGGTCTCGCTGTCGTTCGCGTCGCACGACGGTGATTTTGCCGAGGAGTTCGAGAGCTTCGGCGAGATGGACCGCGACGCCGGCAGGTTCCACGAGCGCGGCGGCAGCTTAGGCGATGACGTTTGCGTTGATTTGATACATCCGGATGCCGTGGTCGAATTGAAGGAGATCGCTTACCGTATGATTCGCTCCGGCTATGAGAAGGAGTGTGTTCAGGTGTACAGTAGTGTTCGGCGAGACGCTTTGGATGAGTGTCTGGTGATTCTCGGAGTTGAGAAGCTGAGCATTGAGGAGGTTCAGAAAATCGAGTGGAAATTGCTGGACGAGAAAATGAAGAAGTGGATACACGCTGTGAAAATCGGGGTTAGGGTTTTATTATTCGGGGAGAGGAGACTCTCCGATCAGATTTTCGAGGGAACGGATGAGACTAGGGAGATATGTTTCAATGAGACCACCAAGGGGTGCATTATGCAGCTGTTGAATTTCGGAGAGGCTGTTGCCATTGGGAAAAGGTCGCCGGAGAAGCTGTTTCGGATTCTGGACATGTATGATGTGCTGGCAGATGTGTATCCGGACTTGGAGCAGCTGGTGAGTGATGAATTTGTGCTTGCTGAGGCAAAGGGAGTGTTGGATGGACTCGGTGATGCGGCTAGAGGGACCTTTGCTGAGTTTGAGAATGCCGTTCAGGGTGAGGCCAGTAAGAAACCAATGCTGAGTGGAGAGATTCATCCCATTTCGCGGTATGTCATGAACTATGTGAGATTGCTGGTTGATTATAGTGAAACTCTGAATTTGCTTTTAGATACCGGAGATGATGAGTTACAGGGTTTGCCAAATGATGATTTGGGGATAGAAAGTATGTCTCCGATAGGACGTAGGCTTTTGCTGTTGATAAATAATTTGGAGTCCAATCTTGGGGAGAAATCCAAGGTTTATGAGGATGGAGCACTGCAATGTGTGTTTATGATGAATAACATTCAATACATAGTGCAGAAAGTGAAAGATTCTGAGCTTAGAAAGCTCTTGGGAGACAATTGGGTTCGCAAACGCCGTGGCCAGGTGCGCCAGTATGCTACTGGTTATCTTAGAGCTGCCTGGAGCAAGGCCCTGTCCTGTTTGAAAGATGAAGGAATTGGCGGCAGCACAAGCAATGCTTCAAGGATGGCTTTGAAGGAGAGGTTTAAGAATTTCAATGCCAACTTTGAAGACCTGTATAGAACCCAGACAGCTTGGAAGGTCCCCGATGCTCAGCTTCGCGAAGAGCTTCGGATATCTATATCAGAGAAGGTGATTCCTGCTTACCGGTCCTTTATGGGGAGGTTCGGGAATCAGCTAGAGAGTGGAAGGCATGCCGGGAAATATATAAAGTACACCGCAGATGATTTGGAGAGCTATGTGTTGGATTTGTTCGAAGGGACACCTTGTGTTCTGCACCATCTTAGAAGAAAAAGTACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0006810 GO:0006887 GO:0008150 GO:0009987 GO:0016192 GO:0032940 GO:0046903 GO:0051179 GO:0051234
KEGG Pathways
Metabolic & Signaling
ko04910 map04910
Pfam Domains
Protein Families
Exo70

Protein Analysis

652

Amino Acids

73.57

Weight (kDa)

4.99

Isoelectric Point (pI)

37.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exo70_N PF20669 72 - 151 2e-13 Exocyst complex component Exo70 N-terminal
Exo70_C PF03081 279 - 634 4e-128 Exo70 exocyst complex subunit C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G50380
fragaria_vesca FvH4_5g08200 FvH4_5g08200
malus_domestica MD06G1142600.v1.1 MD14G1157800.v1.1
prunus_persica Prupe.5G151900_v2.0.a1
pyrus_communis pycom06g13240 pycom14g13130
rosa_chinensis RchiOBHm_Chr7g0190311
rosa_laevigata RLG00000004543
rosa_multiflora Rmu_co8286183.1_g000001 Rmu_sc0005487.1_g000003
rosa_roxburghii Rroxscaffold_3G00264740
rosa_rugosa Rorug06G0503900
rosa_samantha Rh7AG109400 Rh7BG111800 Rh7CG114300 Rh7DG112400
rosa_wichuraiana Rw7G009490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 576
AccBSI CCGCTC 1 cut(s) 469
AccII CGCG 8 cut(s) 35, 263, 413, 521, 576, 600, 1240, 1758
AccIII TCCGGA 3 cut(s) 453, 643, 1072
AclWI GGATC 5 cut(s) 63, 328, 378, 445, 490
AcoI YGGCCR 3 cut(s) 27, 321, 1555
AcsI RAATTY 5 cut(s) 166, 982, 1100, 1291, 1687
AcyI GRCGYC 1 cut(s) 579
AdeI CACNNNGTG 2 cut(s) 853, 1925
AfaI GTAC 3 cut(s) 722, 1871, 1954
AfiI CCNNNNNNNGG 9 cut(s) 217, 247, 282, 349, 960, 1239, 1416, 1558, 1815
AflIII ACRYGT 1 cut(s) 1044
AgeI ACCGGT 1 cut(s) 1803
AgsI TTSAA 9 cut(s) 664, 946, 982, 1481, 1621, 1659, 1672, 1693, 1706
AjnI CCWGG 3 cut(s) 93, 1557, 1595
AleI CACNNNNGTG 1 cut(s) 531
AloI GAACNNNNNNTCC 2 cut(s) 419, 451
Alw21I GWGCWC 1 cut(s) 1450
Alw26I GTCTC 7 cut(s) 511, 732, 886, 920, 944, 1368, 1524
AlwI GGATC 5 cut(s) 63, 328, 378, 445, 490
Aor13HI TCCGGA 3 cut(s) 453, 643, 1072
AoxI GGCC 7 cut(s) 27, 219, 321, 390, 1194, 1555, 1605
ApeKI GCWGC 6 cut(s) 76, 606, 973, 1084, 1592, 1641
ApoI RAATTY 5 cut(s) 166, 982, 1100, 1291, 1687
ArsI GACNNNNNNTTYG 4 cut(s) 197, 229, 521, 553
AsiGI ACCGGT 1 cut(s) 1803
Asp700I GAANNNNTTC 1 cut(s) 1764
AspLEI GCGC 5 cut(s) 76, 275, 483, 600, 1566
AspS9I GGNCC 7 cut(s) 385, 390, 571, 1158, 1606, 1738, 1806
AsuC2I CCSGG 2 cut(s) 389, 1855
AsuHPI GGTGA 8 cut(s) 127, 244, 545, 772, 1102, 1154, 1202, 1801
AsuII TTCGAA 1 cut(s) 1911
AvaII GGWCC 5 cut(s) 385, 571, 1158, 1738, 1806
BalI TGGCCA 1 cut(s) 1557
BarI GAAGNNNNNNTAC 1 cut(s) 1936
BauI CACGAG 1 cut(s) 593
BbsI GAAGAC 1 cut(s) 1713
Bbv12I GWGCWC 1 cut(s) 1450
BbvCI CCTCAGC 2 cut(s) 338, 1113
BbvI GCAGC 6 cut(s) 88, 618, 985, 1096, 1579, 1653
BccI CCATC 6 cut(s) 410, 562, 1127, 1436, 1657, 1944
BceAI ACGGC 6 cut(s) 260, 308, 505, 635, 1166, 1536
BciT130I CCWGG 3 cut(s) 95, 1559, 1597
BciVI GTATCC 2 cut(s) 837, 1080
BclI TGATCA 1 cut(s) 180
BcnI CCSGG 2 cut(s) 389, 1855
BcoDI GTCTC 7 cut(s) 511, 732, 886, 920, 944, 1368, 1524
BfaI CTAG 3 cut(s) 930, 1152, 1835
BfoI RGCGCY 2 cut(s) 276, 484
BfuAI ACCTGC 1 cut(s) 576
BfuI GTATCC 2 cut(s) 837, 1080
BglI GCCNNNNNGGC 1 cut(s) 489
BlpI GCTNAGC 2 cut(s) 782, 1749
Bme1390I CCNGG 5 cut(s) 95, 389, 1559, 1597, 1855
Bme18I GGWCC 5 cut(s) 385, 571, 1158, 1738, 1806
BmgT120I GGNCC 7 cut(s) 385, 390, 571, 1158, 1606, 1738, 1806
BmiI GGNNCC 3 cut(s) 590, 1159, 1740
BmrFI CCNGG 5 cut(s) 95, 389, 1559, 1597, 1855
BmsI GCATC 3 cut(s) 637, 1135, 1735
BpiI GAAGAC 1 cut(s) 1713
BpmI CTGGAG 3 cut(s) 127, 446, 1618
Bpu10I CCTNAGC 3 cut(s) 338, 610, 1113
Bpu1102I GCTNAGC 2 cut(s) 782, 1749
Bpu14I TTCGAA 1 cut(s) 1911
BpuMI CCSGG 2 cut(s) 389, 1855
BsaBI GATNNNNATC 1 cut(s) 1068
BsaHI GRCGYC 1 cut(s) 579
BsaI GGTCTC 2 cut(s) 511, 944
BsaJI CCNNGG 9 cut(s) 33, 94, 281, 324, 543, 651, 957, 1428, 1552
BsaWI WCCGGW 6 cut(s) 240, 453, 643, 1072, 1307, 1803
BsaXI ACNNNNNCTCC 8 cut(s) 302, 332, 419, 449, 981, 1011, 1013, 1043
Bsc4I CCNNNNNNNGG 9 cut(s) 217, 247, 282, 349, 960, 1239, 1416, 1558, 1815
Bse118I RCCGGY 3 cut(s) 156, 581, 1803
Bse1I ACTGG 3 cut(s) 1197, 1567, 1582
Bse3DI GCAATG 2 cut(s) 1460, 1657
Bse8I GATNNNNATC 1 cut(s) 1068
BseAI TCCGGA 3 cut(s) 453, 643, 1072
BseBI CCWGG 3 cut(s) 95, 1559, 1597
BseDI CCNNGG 9 cut(s) 33, 94, 281, 324, 543, 651, 957, 1428, 1552
BseGI GGATG 9 cut(s) 402, 640, 652, 754, 928, 1138, 1228, 1447, 1668
BseJI GATNNNNATC 1 cut(s) 1068
BseLI CCNNNNNNNGG 9 cut(s) 217, 247, 282, 349, 960, 1239, 1416, 1558, 1815
BseMI GCAATG 2 cut(s) 1460, 1657
BseMII CTCAG 7 cut(s) 352, 773, 1104, 1158, 1205, 1500, 1763
BseNI ACTGG 3 cut(s) 1197, 1567, 1582
BseRI GAGGAG 5 cut(s) 283, 302, 560, 806, 904
BseX3I CGGCCG 1 cut(s) 27
BseXI GCAGC 6 cut(s) 88, 618, 985, 1096, 1579, 1653
BsgI GTGCAG 2 cut(s) 1511, 1916
Bsh1236I CGCG 8 cut(s) 35, 263, 413, 521, 576, 600, 1240, 1758
Bsh1285I CGRYCG 3 cut(s) 30, 211, 363
BshFI GGCC 7 cut(s) 29, 221, 323, 392, 1196, 1557, 1607
BshTI ACCGGT 1 cut(s) 1803
BsiEI CGRYCG 3 cut(s) 30, 211, 363
BsiHKAI GWGCWC 1 cut(s) 1450
BslFI GGGAC 4 cut(s) 449, 1171, 1724, 1930
BslI CCNNNNNNNGG 9 cut(s) 217, 247, 282, 349, 960, 1239, 1416, 1558, 1815
BsmAI GTCTC 7 cut(s) 511, 732, 886, 920, 944, 1368, 1524
BsmBI CGTCTC 1 cut(s) 732
BsmFI GGGAC 4 cut(s) 449, 1171, 1724, 1930
BsmI GAATGC 1 cut(s) 1183
BsnI GGCC 7 cut(s) 29, 221, 323, 392, 1196, 1557, 1607
Bso31I GGTCTC 2 cut(s) 511, 944
Bsp119I TTCGAA 1 cut(s) 1911
Bsp1286I GDGCHC 1 cut(s) 1450
Bsp13I TCCGGA 3 cut(s) 453, 643, 1072
Bsp1407I TGTACA 1 cut(s) 720
Bsp143I GATC 9 cut(s) 55, 135, 180, 333, 370, 450, 495, 669, 901
Bsp1720I GCTNAGC 2 cut(s) 782, 1749
Bsp68I TCGCGA 2 cut(s) 413, 1758
BspANI GGCC 7 cut(s) 29, 221, 323, 392, 1196, 1557, 1607
BspCNI CTCAG 7 cut(s) 351, 774, 1105, 1159, 1206, 1501, 1762
BspEI TCCGGA 3 cut(s) 453, 643, 1072
BspFNI CGCG 8 cut(s) 35, 263, 413, 521, 576, 600, 1240, 1758
BspHI TCATGA 2 cut(s) 373, 1248
BspLI GGNNCC 3 cut(s) 590, 1159, 1740
BspMI ACCTGC 1 cut(s) 576
BspPI GGATC 5 cut(s) 63, 328, 378, 445, 490
BspQI GCTCTTC 2 cut(s) 83, 1755
BspT104I TTCGAA 1 cut(s) 1911
BspTNI GGTCTC 2 cut(s) 511, 944
BsrBI CCGCTC 1 cut(s) 469
BsrDI GCAATG 2 cut(s) 1460, 1657
BsrFI RCCGGY 3 cut(s) 156, 581, 1803
BsrGI TGTACA 1 cut(s) 720
BsrI ACTGG 3 cut(s) 1197, 1567, 1582
BssAI RCCGGY 3 cut(s) 156, 581, 1803
BssECI CCNNGG 9 cut(s) 33, 94, 281, 324, 543, 651, 957, 1428, 1552
BssMI GATC 9 cut(s) 55, 135, 180, 333, 370, 450, 495, 669, 901
BssNI GRCGYC 1 cut(s) 579
BssSI CACGAG 1 cut(s) 593
BssT1I CCWWGG 3 cut(s) 281, 957, 1428
Bst2BI CACGAG 1 cut(s) 593
Bst2UI CCWGG 3 cut(s) 95, 1559, 1597
Bst4CI ACNGT 4 cut(s) 463, 533, 680, 725
Bst6I CTCTTC 2 cut(s) 83, 1755
BstACI GRCGYC 1 cut(s) 579
BstAUI TGTACA 1 cut(s) 720
BstBI TTCGAA 1 cut(s) 1911
BstC8I GCNNGC 6 cut(s) 37, 66, 583, 1059, 1110, 1851
BstDSI CCRYGG 4 cut(s) 33, 324, 651, 1552
BstENI CCTNNNNNAGG 1 cut(s) 347
BstF5I GGATG 9 cut(s) 402, 640, 652, 754, 928, 1138, 1228, 1447, 1668
BstFNI CGCG 8 cut(s) 35, 263, 413, 521, 576, 600, 1240, 1758
BstH2I RGCGCY 2 cut(s) 276, 484
BstHHI GCGC 5 cut(s) 76, 275, 483, 600, 1566
BstKTI GATC 9 cut(s) 58, 138, 183, 336, 373, 453, 498, 672, 904
BstMAI GTCTC 7 cut(s) 511, 732, 886, 920, 944, 1368, 1524
BstMBI GATC 9 cut(s) 55, 135, 180, 333, 370, 450, 495, 669, 901
BstMCI CGRYCG 3 cut(s) 30, 211, 363
BstNI CCWGG 3 cut(s) 95, 1559, 1597
BstNSI RCATGY 2 cut(s) 1048, 1853
BstSCI CCNGG 5 cut(s) 93, 387, 1557, 1595, 1853
BstUI CGCG 8 cut(s) 35, 263, 413, 521, 576, 600, 1240, 1758
BstV1I GCAGC 6 cut(s) 88, 618, 985, 1096, 1579, 1653
BstV2I GAAGAC 1 cut(s) 1713
BstX2I RGATCY 1 cut(s) 333
BstYI RGATCY 1 cut(s) 333
BstZI CGGCCG 1 cut(s) 27
BsuI GTATCC 2 cut(s) 837, 1080
BsuRI GGCC 7 cut(s) 29, 221, 323, 392, 1196, 1557, 1607
BtgI CCRYGG 4 cut(s) 33, 324, 651, 1552
BtgZI GCGATG 3 cut(s) 278, 428, 630
BtsCI GGATG 9 cut(s) 402, 640, 652, 754, 928, 1138, 1228, 1447, 1668
BtsI GCAGTG 1 cut(s) 1448
BtsIMutI CAGTG 1 cut(s) 1448
BtuMI TCGCGA 2 cut(s) 413, 1758
BveI ACCTGC 1 cut(s) 576
Cac8I GCNNGC 6 cut(s) 37, 66, 583, 1059, 1110, 1851
CciI TCATGA 2 cut(s) 373, 1248
CciNI GCGGCCGC 1 cut(s) 27
CfoI GCGC 5 cut(s) 76, 275, 483, 600, 1566
Cfr10I RCCGGY 3 cut(s) 156, 581, 1803
Cfr13I GGNCC 7 cut(s) 385, 390, 571, 1158, 1606, 1738, 1806
Cfr42I CCGCGG 1 cut(s) 36
CpoI CGGWCCG 1 cut(s) 385
CseI GACGC 4 cut(s) 269, 510, 587, 749
Csp6I GTAC 3 cut(s) 721, 1870, 1953
CspAI ACCGGT 1 cut(s) 1803
CspCI CAANNNNNGTGG 2 cut(s) 1534, 1569
CspI CGGWCCG 1 cut(s) 385
CviAII CATG 5 cut(s) 346, 374, 1045, 1249, 1850
CviQI GTAC 3 cut(s) 721, 1870, 1953
DpnI GATC 9 cut(s) 57, 137, 182, 335, 372, 452, 497, 671, 903
DpnII GATC 9 cut(s) 55, 135, 180, 333, 370, 450, 495, 669, 901
DraIII CACNNNGTG 2 cut(s) 853, 1925
EaeI YGGCCR 3 cut(s) 27, 321, 1555
EagI CGGCCG 1 cut(s) 27
Eam1104I CTCTTC 2 cut(s) 83, 1755
EarI CTCTTC 2 cut(s) 83, 1755
EciI GGCGGA 3 cut(s) 215, 323, 428
EclXI CGGCCG 1 cut(s) 27
Eco130I CCWWGG 3 cut(s) 281, 957, 1428
Eco31I GGTCTC 2 cut(s) 511, 944
Eco32I GATATC 1 cut(s) 1773
Eco47I GGWCC 5 cut(s) 385, 571, 1158, 1738, 1806
Eco52I CGGCCG 1 cut(s) 27
EcoNI CCTNNNNNAGG 1 cut(s) 347
EcoO109I RGGNCCY 3 cut(s) 1158, 1606, 1738
EcoRII CCWGG 3 cut(s) 93, 1557, 1595
EcoRV GATATC 1 cut(s) 1773
EcoT14I CCWWGG 3 cut(s) 281, 957, 1428
ErhI CCWWGG 3 cut(s) 281, 957, 1428
Esp3I CGTCTC 1 cut(s) 732
FaeI CATG 5 cut(s) 349, 377, 1048, 1252, 1853
FalI AAGNNNNNCTT 4 cut(s) 1639, 1671, 1651, 1683
FaqI GGGAC 4 cut(s) 449, 1171, 1724, 1930
FatI CATG 5 cut(s) 345, 373, 1044, 1248, 1849
FauI CCCGC 3 cut(s) 28, 474, 495
FbaI TGATCA 1 cut(s) 180
FokI GGATG 9 cut(s) 389, 627, 659, 761, 935, 1145, 1215, 1454, 1675
FspBI CTAG 3 cut(s) 930, 1152, 1835
GlaI GCGC 5 cut(s) 75, 274, 482, 599, 1565
GsuI CTGGAG 3 cut(s) 127, 446, 1618
HaeII RGCGCY 2 cut(s) 276, 484
HaeIII GGCC 7 cut(s) 29, 221, 323, 392, 1196, 1557, 1607
HgaI GACGC 4 cut(s) 269, 510, 587, 749
HhaI GCGC 5 cut(s) 76, 275, 483, 600, 1566
Hin1I GRCGYC 1 cut(s) 579
Hin1II CATG 5 cut(s) 349, 377, 1048, 1252, 1853
Hin6I GCGC 5 cut(s) 74, 273, 481, 598, 1564
HinP1I GCGC 5 cut(s) 74, 273, 481, 598, 1564
HphI GGTGA 8 cut(s) 127, 244, 545, 772, 1102, 1154, 1202, 1801
Hpy166II GTNNAC 3 cut(s) 328, 721, 1872
Hpy8I GTNNAC 3 cut(s) 328, 721, 1872
Hpy99I CGWCG 8 cut(s) 16, 19, 191, 209, 263, 526, 533, 581
HpyCH4III ACNGT 4 cut(s) 463, 533, 680, 725
HpyCH4IV ACGT 2 cut(s) 621, 1375
HpyCH4V TGCA 5 cut(s) 966, 973, 1453, 1492, 1933
HpySE526I ACGT 2 cut(s) 621, 1375
Hsp92I GRCGYC 1 cut(s) 579
Hsp92II CATG 5 cut(s) 349, 377, 1048, 1252, 1853
HspAI GCGC 5 cut(s) 74, 273, 481, 598, 1564
Kpn2I TCCGGA 3 cut(s) 453, 643, 1072
KroI GCCGGC 1 cut(s) 581
KroNI GCCGGC 1 cut(s) 583
Ksp22I TGATCA 1 cut(s) 180
KspI CCGCGG 1 cut(s) 36
Kzo9I GATC 9 cut(s) 55, 135, 180, 333, 370, 450, 495, 669, 901
LguI GCTCTTC 2 cut(s) 83, 1755
LmnI GCTCC 5 cut(s) 270, 695, 1081, 1445, 1599
Lsp1109I GCAGC 6 cut(s) 88, 618, 985, 1096, 1579, 1653
LweI GCATC 3 cut(s) 637, 1135, 1735
MaeI CTAG 3 cut(s) 930, 1152, 1835
MaeII ACGT 2 cut(s) 621, 1375
MaeIII GTNAC 1 cut(s) 1320
MalI GATC 9 cut(s) 57, 137, 182, 335, 372, 452, 497, 671, 903
MbiI CCGCTC 1 cut(s) 469
MboI GATC 9 cut(s) 55, 135, 180, 333, 370, 450, 495, 669, 901
MboII GAAGA 6 cut(s) 100, 130, 847, 1718, 1772, 1956
MfeI CAATTG 1 cut(s) 1534
MflI RGATCY 1 cut(s) 333
MhlI GDGCHC 1 cut(s) 1450
MlsI TGGCCA 1 cut(s) 1557
MluNI TGGCCA 1 cut(s) 1557
MlyI GAGTC 6 cut(s) 299, 311, 467, 888, 1131, 1415
MmeI TCCRAC 3 cut(s) 348, 1110, 1881
Mox20I TGGCCA 1 cut(s) 1557
MroI TCCGGA 3 cut(s) 453, 643, 1072
MroNI GCCGGC 1 cut(s) 581
MroXI GAANNNNTTC 1 cut(s) 1764
MscI TGGCCA 1 cut(s) 1557
MseI TTAA 1 cut(s) 1683
MslI CAYNNNNRTG 3 cut(s) 531, 645, 1453
Msp20I TGGCCA 1 cut(s) 1557
MspA1I CMGCKG 3 cut(s) 35, 976, 1087
MspR9I CCNGG 5 cut(s) 95, 389, 1559, 1597, 1855
MunI CAATTG 1 cut(s) 1534
Mva1269I GAATGC 1 cut(s) 1183
MvaI CCWGG 3 cut(s) 95, 1559, 1597
MvnI CGCG 8 cut(s) 35, 263, 413, 521, 576, 600, 1240, 1758
NaeI GCCGGC 1 cut(s) 583
NciI CCSGG 2 cut(s) 389, 1855
NdeII GATC 9 cut(s) 55, 135, 180, 333, 370, 450, 495, 669, 901
NgoMIV GCCGGC 1 cut(s) 581
NlaIII CATG 5 cut(s) 349, 377, 1048, 1252, 1853
NlaIV GGNNCC 3 cut(s) 590, 1159, 1740
NmeAIII GCCGAG 3 cut(s) 250, 418, 568
NotI GCGGCCGC 1 cut(s) 27
NruI TCGCGA 2 cut(s) 413, 1758
NspI RCATGY 2 cut(s) 1048, 1853
NspV TTCGAA 1 cut(s) 1911
OliI CACNNNNGTG 1 cut(s) 531
PaeI GCATGC 1 cut(s) 1853
PagI TCATGA 2 cut(s) 373, 1248
PciI ACATGT 1 cut(s) 1044
PciSI GCTCTTC 2 cut(s) 83, 1755
PcsI WCGNNNNNNNCGW 6 cut(s) 11, 170, 213, 222, 525, 1549
PctI GAATGC 1 cut(s) 1183
PdiI GCCGGC 1 cut(s) 583
PdmI GAANNNNTTC 1 cut(s) 1764
PinAI ACCGGT 1 cut(s) 1803
PleI GAGTC 6 cut(s) 298, 310, 467, 888, 1131, 1414
PpsI GAGTC 6 cut(s) 298, 310, 467, 888, 1131, 1414
PpuMI RGGWCCY 2 cut(s) 1158, 1738
PscI ACATGT 1 cut(s) 1044
Psp5II RGGWCCY 2 cut(s) 1158, 1738
Psp6I CCWGG 3 cut(s) 93, 1557, 1595
PspGI CCWGG 3 cut(s) 93, 1557, 1595
PspN4I GGNNCC 3 cut(s) 590, 1159, 1740
PspPI GGNCC 7 cut(s) 385, 390, 571, 1158, 1606, 1738, 1806
PspPPI RGGWCCY 2 cut(s) 1158, 1738
PsuI RGATCY 1 cut(s) 333
PvuII CAGCTG 2 cut(s) 976, 1087
RruI TCGCGA 2 cut(s) 413, 1758
RsaI GTAC 3 cut(s) 722, 1871, 1954
RsaNI GTAC 3 cut(s) 721, 1870, 1953
RseI CAYNNNNRTG 3 cut(s) 531, 645, 1453
Rsr2I CGGWCCG 1 cut(s) 385
RsrII CGGWCCG 1 cut(s) 385
SacII CCGCGG 1 cut(s) 36
SapI GCTCTTC 2 cut(s) 83, 1755
SaqAI TTAA 1 cut(s) 1683
Sau3AI GATC 9 cut(s) 55, 135, 180, 333, 370, 450, 495, 669, 901
Sau96I GGNCC 7 cut(s) 385, 390, 571, 1158, 1606, 1738, 1806
SchI GAGTC 6 cut(s) 299, 311, 467, 888, 1131, 1415
ScrFI CCNGG 5 cut(s) 95, 389, 1559, 1597, 1855
SduI GDGCHC 1 cut(s) 1450
SfaNI GCATC 3 cut(s) 637, 1135, 1735
Sfr303I CCGCGG 1 cut(s) 36
SfuI TTCGAA 1 cut(s) 1911
SgrBI CCGCGG 1 cut(s) 36
SinI GGWCC 5 cut(s) 385, 571, 1158, 1738, 1806
SmiMI CAYNNNNRTG 3 cut(s) 531, 645, 1453
SphI GCATGC 1 cut(s) 1853
SspMI CTAG 3 cut(s) 930, 1152, 1835
StyD4I CCNGG 5 cut(s) 93, 387, 1557, 1595, 1853
StyI CCWWGG 3 cut(s) 281, 957, 1428
TaaI ACNGT 4 cut(s) 463, 533, 680, 725
TaiI ACGT 2 cut(s) 624, 1378
TaqII GACCGA 2 cut(s) 225, 349
TatI WGTACW 3 cut(s) 720, 1869, 1952
Tru1I TTAA 1 cut(s) 1683
Tru9I TTAA 1 cut(s) 1683
TscAI CASTG 1 cut(s) 1455
TseI GCWGC 6 cut(s) 76, 606, 973, 1084, 1592, 1641
TspDTI ATGAA 6 cut(s) 848, 1113, 1217, 1265, 1484, 1641
TspGWI ACGGA 1 cut(s) 935
TspRI CASTG 1 cut(s) 1455
VpaK11BI GGWCC 5 cut(s) 385, 571, 1158, 1738, 1806
XagI CCTNNNNNAGG 1 cut(s) 347
XapI RAATTY 5 cut(s) 166, 982, 1100, 1291, 1687
XceI RCATGY 2 cut(s) 1048, 1853
XcmI CCANNNNNNNNNTGG 1 cut(s) 1574
XmnI GAANNNNTTC 1 cut(s) 1764
XspI CTAG 3 cut(s) 930, 1152, 1835
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.