FvH4_5g11630

Protein of unknown function (DUF2439)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0012619
Physical Location & Seq
Forward (+)
6592685 .. 6597901
5217 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g11630.t2

Sequence Viewer

Length: 2136 bp
ATGGCGGAAGTGAAGCGGTGGTGCGTGACCTACACGAACCACATGAAGCAGAAGCGCAAGGTTTACCAGGACGGTTTCTTGGAGCTCCACACCTCCACCAATAAGATGTTGCTGTACGACGACTGCGAGAAGCTATTGGAGTGCAGGATCTTGAAGAAAGACGAAGCCGTTTGCTCCGGCGAAACACTCACCTTCAATGCCTTTCTCGTTGATGTGAACGACGCCGAATCCGGTGCCGGAGATCAGAAACCTAAGGCCGGTGTCAGTTCTGGAGAAAACGACATGAAGTTCAGTGAGAAGCGAGCGAAATCGTGGAATAAGCCGCAGCCGTTTCAGACTCCGGCGCATAATGTGATCAGAGGGAGGAAGCCACTGCAAAATTTGAGTCCGTTGCAGAATATTATCAAAGAGTTCAAGAAGAGGGAACTACACAAGTATGGTGCAGCAATCAGTAGTCCCGAAACAGTGAAAACTAGCACAACAGAATGGCAGGCTTTGTACACCACACAGCTAACTCAAAAGGCGAAGAAGTATCATGATGGTTTCTTGCAACTAGCAATCACCGGGTCTCACGGAAAGCAGATAATACTGTTGGATTCAAGCAGGAATCAGTTAAATAGCAGGTTCATTAAGAAAGATGAGGTTATAGCATCTGGTGGATCAATAGCATTCGATGCTCATTTGGTTGATATTGGAGAGCAGGAAGGAGACCATAAACCTGCAAGGGATTTGCATCTTAAAGAAGATAAGCGGAATGTTGTGGGGAAGACAAGAATAAAGCAGGAAGAGAGTAATGGTGTTCTCACTGGTAAAGATGATGGAAAAGAATGGAAGGTCCTATACACTACACAAGTAACTCAAAAGGCCAAGAAGTACCATGATGGCTTCTTACAGATTGCATCCAGGGGCTCTTTTGGAAGACAGGCGATGCTATACGATGCAACCAGGAAACTCTTGGAAACTAGGTTCCTCAAAAAAGATGAAGCTATAAGATCTGGTGAATCATTTGCATTTAGTGCTCATTTGGTTGACATTGGGGTACCTGAGGGGAATGAAGCTGGGGCTGATTTGAAGTGTGAAGCAAAAGATTTCCATGTGCAAAAATCAAGGAAATTGCATGGAGAAGATGATTGCATTATAATCGATGATTTTGAAGTAAAAGAGTGGGAAGCTCTATACACTAGTCAGATTACTCAGAAGTCCAAGAAGTACCATGTTGGCATCCTCAGACTTGCCTCTTCTGGTTCTTTCCGTAAGAAGGTTACTTTACTTGGTGAAGATAAAACCACACTGAGCAATAGGTATGTTAGGTTGTCAGAAGATATAAAAACAGGATCTTCTCTTGAACTACCAAAATACATGGTGGAGGTTGGTAGTCCACGTGCAATTGCTGGAGATGAAGGAATAACTCTCAACAAAGCTTGTATCAAGAGACCTTCAGACTCAGAGTTTAGCATCTCTAGTGTAGAGGTAACAAAATCGAACAGAGGCATCTCCAGAAACAATCCTTTAAGTGACAGTGAAGAGAAATCTCAGAACAAAGCTAGTTTGAAGAAAGCCTTAAACTCAAATTCTAGCATATCTAGTGTACAGGAAACAAAACCAAGCAGGGGAGTCCCTACAAATAAGCTTATACGTGATGCCCATCAGATTTTGTCCTTTCTCCAAGACCCTAGGGATCAGGAGACTGTAGCTTCACGTCAAACTAACAGCACTGCAAGACCAGTTTCCTCAACTAAGGGGTCTCAAGTTTCAGATGCTATAATGATGGATATCTCTGAAGGCGTTCGGCCATCACAATCACAATCATCAGAACCACATAACAGATCAGTTGAAAATATAGAACCAGGCAATATTACTGAAACTGGAAATAAAGCATTGTCCAGCGGTTGTGGCAGTCAATTAGCTGAGAGTGAAGACATCAAAAACTTCCACCAGGTTCATTCAGACCATGTCAAAGCTGACACTGCACGGCATAATACAGACTGTGTGTCTGATGAATCAAGATCAGGTTCTTGTGTTTCTCATGTTGCTGCTGACAACGAGAAGATTGTATCCCAGGAGCCTAGTTGTGCAAGGAAAGTAGAACGCCCAAGTTTTGAACTAGAAGGTCCTAGTTTTGATCTTGGATTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2439

Protein Analysis

712

Amino Acids

79.03

Weight (kDa)

8.5

Isoelectric Point (pI)

44.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ZGRF1-like_N PF10382 4 - 77 6.3e-15 DNA helicase ZGRF1-like, N-terminal domain
ZGRF1-like_N PF10382 161 - 237 1.6e-14 DNA helicase ZGRF1-like, N-terminal domain
ZGRF1-like_N PF10382 275 - 346 1.7e-16 DNA helicase ZGRF1-like, N-terminal domain
ZGRF1-like_N PF10382 386 - 458 2.1e-13 DNA helicase ZGRF1-like, N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1139
Acc36I ACCTGC 2 cut(s) 612, 727
Acc65I GGTACC 1 cut(s) 1039
AccB1I GGYRCC 2 cut(s) 233, 1039
AciI CCGC 5 cut(s) 5, 16, 323, 751, 1887
AclWI GGATC 4 cut(s) 155, 667, 1342, 1686
AcoI YGGCCR 1 cut(s) 1790
AcsI RAATTY 2 cut(s) 379, 1570
AcuI CTGAAG 2 cut(s) 1422, 1800
AcvI CACGTG 1 cut(s) 1382
AcyI GRCGYC 1 cut(s) 222
AfaI GTAC 6 cut(s) 116, 500, 875, 1041, 1211, 1590
AfiI CCNNNNNNNGG 3 cut(s) 257, 1258, 1610
AhdI GACNNNNNGTC 1 cut(s) 1990
AhlI ACTAGT 1 cut(s) 1181
AjiI CACGTC 1 cut(s) 1700
AjnI CCWGG 6 cut(s) 66, 902, 944, 1846, 1935, 2058
AloI GAACNNNNNNTCC 2 cut(s) 950, 982
Alw21I GWGCWC 2 cut(s) 87, 1021
Alw26I GTCTC 5 cut(s) 573, 702, 1426, 1679, 1749
AlwI GGATC 4 cut(s) 155, 667, 1342, 1686
AoxI GGCC 3 cut(s) 255, 864, 1790
ApeKI GCWGC 3 cut(s) 325, 443, 2033
ApoI RAATTY 2 cut(s) 379, 1570
ArsI GACNNNNNNTTYG 2 cut(s) 370, 402
Asp700I GAANNNNTTC 1 cut(s) 1785
Asp718I GGTACC 1 cut(s) 1039
AspA2I CCTAGG 1 cut(s) 1673
AspLEI GCGC 2 cut(s) 57, 346
AspS9I GGNCC 2 cut(s) 835, 2111
AsuC2I CCSGG 1 cut(s) 565
AsuHPI GGTGA 4 cut(s) 181, 553, 1010, 1286
AvaII GGWCC 2 cut(s) 835, 2111
AvrII CCTAGG 1 cut(s) 1673
AxyI CCTNAGG 2 cut(s) 252, 1044
BanI GGYRCC 2 cut(s) 233, 1039
BanII GRGCYC 2 cut(s) 87, 911
BarI GAAGNNNNNNTAC 2 cut(s) 824, 856
BbrPI CACGTG 1 cut(s) 1382
BbsI GAAGAC 3 cut(s) 773, 925, 1923
Bbv12I GWGCWC 2 cut(s) 87, 1021
BbvI GCAGC 3 cut(s) 337, 455, 2020
BccI CCATC 6 cut(s) 533, 812, 875, 1653, 1762, 1801
BceAI ACGGC 3 cut(s) 152, 313, 1988
BcgI CGANNNNNNTGC 4 cut(s) 215, 249, 1123, 1157
BciT130I CCWGG 6 cut(s) 68, 904, 946, 1848, 1937, 2060
BciVI GTATCC 1 cut(s) 2065
BclI TGATCA 1 cut(s) 354
BcnI CCSGG 1 cut(s) 565
BcoDI GTCTC 5 cut(s) 573, 702, 1426, 1679, 1749
BcuI ACTAGT 1 cut(s) 1181
BfmI CTRYAG 1 cut(s) 1689
BfuAI ACCTGC 2 cut(s) 612, 727
BfuI GTATCC 1 cut(s) 2065
BglII AGATCT 1 cut(s) 992
BisI GCNGC 4 cut(s) 323, 326, 444, 2034
BlnI CCTAGG 1 cut(s) 1673
BlsI GCNGC 4 cut(s) 324, 327, 445, 2035
Bme1390I CCNGG 7 cut(s) 68, 565, 904, 946, 1848, 1937, 2060
Bme18I GGWCC 2 cut(s) 835, 2111
BmeRI GACNNNNNGTC 1 cut(s) 1990
BmgBI CACGTC 1 cut(s) 1700
BmgT120I GGNCC 2 cut(s) 835, 2111
BmiI GGNNCC 4 cut(s) 235, 968, 1041, 2064
BmrFI CCNGG 7 cut(s) 68, 565, 904, 946, 1848, 1937, 2060
BpiI GAAGAC 3 cut(s) 773, 925, 1923
BpmI CTGGAG 3 cut(s) 291, 1413, 1480
BpuEI CTTGAG 1 cut(s) 1731
BpuMI CCSGG 1 cut(s) 565
Bsa29I ATCGAT 1 cut(s) 1143
BsaAI YACGTR 2 cut(s) 1382, 1637
BsaBI GATNNNNATC 3 cut(s) 732, 1644, 1772
BsaHI GRCGYC 1 cut(s) 222
BsaI GGTCTC 4 cut(s) 573, 702, 1426, 1749
BsaJI CCNNGG 3 cut(s) 903, 1673, 2058
BsaWI WCCGGW 1 cut(s) 230
Bsc4I CCNNNNNNNGG 3 cut(s) 257, 1258, 1610
Bse118I RCCGGY 1 cut(s) 257
Bse1I ACTGG 3 cut(s) 811, 1724, 1870
Bse21I CCTNAGG 2 cut(s) 252, 1044
Bse8I GATNNNNATC 3 cut(s) 732, 1644, 1772
BseBI CCWGG 6 cut(s) 68, 904, 946, 1848, 1937, 2060
BseCI ATCGAT 1 cut(s) 1143
BseDI CCNNGG 3 cut(s) 903, 1673, 2058
BseGI GGATG 2 cut(s) 899, 1221
BseJI GATNNNNATC 3 cut(s) 732, 1644, 1772
BseLI CCNNNNNNNGG 3 cut(s) 257, 1258, 1610
BseMII CTCAG 7 cut(s) 1035, 1208, 1240, 1283, 1458, 1547, 1899
BseNI ACTGG 3 cut(s) 811, 1724, 1870
BseXI GCAGC 3 cut(s) 337, 455, 2020
BseYI CCCAGC 1 cut(s) 1058
BsgI GTGCAG 3 cut(s) 163, 462, 1953
BshFI GGCC 3 cut(s) 257, 866, 1792
BshNI GGYRCC 2 cut(s) 233, 1039
BshVI ATCGAT 1 cut(s) 1143
BsiHKAI GWGCWC 2 cut(s) 87, 1021
BsiSI CCGG 6 cut(s) 177, 231, 237, 258, 341, 564
BslFI GGGAC 2 cut(s) 441, 1601
BslI CCNNNNNNNGG 3 cut(s) 257, 1258, 1610
BsmAI GTCTC 5 cut(s) 573, 702, 1426, 1679, 1749
BsmFI GGGAC 2 cut(s) 441, 1601
BsmI GAATGC 1 cut(s) 668
BsnI GGCC 3 cut(s) 257, 866, 1792
Bso31I GGTCTC 4 cut(s) 573, 702, 1426, 1749
Bsp1286I GDGCHC 3 cut(s) 87, 911, 1021
Bsp1407I TGTACA 2 cut(s) 498, 1588
BspACI CCGC 5 cut(s) 5, 16, 323, 751, 1887
BspANI GGCC 3 cut(s) 257, 866, 1792
BspCNI CTCAG 7 cut(s) 1036, 1207, 1239, 1284, 1457, 1546, 1900
BspDI ATCGAT 1 cut(s) 1143
BspHI TCATGA 1 cut(s) 535
BspLI GGNNCC 4 cut(s) 235, 968, 1041, 2064
BspMI ACCTGC 2 cut(s) 612, 727
BspPI GGATC 4 cut(s) 155, 667, 1342, 1686
BspT107I GGYRCC 2 cut(s) 233, 1039
BspTNI GGTCTC 4 cut(s) 573, 702, 1426, 1749
BsrFI RCCGGY 1 cut(s) 257
BsrGI TGTACA 2 cut(s) 498, 1588
BsrI ACTGG 3 cut(s) 811, 1724, 1870
BssAI RCCGGY 1 cut(s) 257
BssECI CCNNGG 3 cut(s) 903, 1673, 2058
BssNI GRCGYC 1 cut(s) 222
BssT1I CCWWGG 1 cut(s) 1673
Bst2UI CCWGG 6 cut(s) 68, 904, 946, 1848, 1937, 2060
Bst4CI ACNGT 6 cut(s) 74, 466, 591, 1520, 1690, 1988
Bst6I CTCTTC 4 cut(s) 413, 780, 1243, 1518
BstACI GRCGYC 1 cut(s) 222
BstAPI GCANNNNNTGC 2 cut(s) 674, 1016
BstAUI TGTACA 2 cut(s) 498, 1588
BstBAI YACGTR 2 cut(s) 1382, 1637
BstC8I GCNNGC 2 cut(s) 303, 492
BstDEI CTNAG 9 cut(s) 252, 1044, 1194, 1226, 1292, 1444, 1533, 1737, 1908
BstF5I GGATG 2 cut(s) 899, 1221
BstHHI GCGC 2 cut(s) 57, 346
BstMAI GTCTC 5 cut(s) 573, 702, 1426, 1679, 1749
BstMWI GCNNNNNNNGC 4 cut(s) 674, 1016, 1893, 1967
BstNI CCWGG 6 cut(s) 68, 904, 946, 1848, 1937, 2060
BstSCI CCNGG 7 cut(s) 66, 563, 902, 944, 1846, 1935, 2058
BstSFI CTRYAG 1 cut(s) 1689
BstV1I GCAGC 3 cut(s) 337, 455, 2020
BstV2I GAAGAC 3 cut(s) 773, 925, 1923
BstX2I RGATCY 3 cut(s) 147, 992, 1334
BstYI RGATCY 3 cut(s) 147, 992, 1334
Bsu15I ATCGAT 1 cut(s) 1143
Bsu36I CCTNAGG 2 cut(s) 252, 1044
BsuI GTATCC 1 cut(s) 2065
BsuRI GGCC 3 cut(s) 257, 866, 1792
BsuTUI ATCGAT 1 cut(s) 1143
BtgZI GCGATG 1 cut(s) 941
BtrI CACGTC 1 cut(s) 1700
BtsCI GGATG 2 cut(s) 899, 1221
BtsI GCAGTG 3 cut(s) 371, 1713, 1965
BtsIMutI CAGTG 8 cut(s) 298, 371, 471, 804, 1289, 1525, 1713, 1965
BveI ACCTGC 2 cut(s) 612, 727
Cac8I GCNNGC 2 cut(s) 303, 492
CciI TCATGA 1 cut(s) 535
CfoI GCGC 2 cut(s) 57, 346
Cfr10I RCCGGY 1 cut(s) 257
Cfr13I GGNCC 2 cut(s) 835, 2111
ClaI ATCGAT 1 cut(s) 1143
CseI GACGC 1 cut(s) 230
CsiI ACCWGGT 1 cut(s) 1935
Csp6I GTAC 6 cut(s) 115, 499, 874, 1040, 1210, 1589
CviQI GTAC 6 cut(s) 115, 499, 874, 1040, 1210, 1589
DdeI CTNAG 9 cut(s) 252, 1044, 1194, 1226, 1292, 1444, 1533, 1737, 1908
DriI GACNNNNNGTC 1 cut(s) 1990
EaeI YGGCCR 1 cut(s) 1790
Eam1104I CTCTTC 4 cut(s) 413, 780, 1243, 1518
Eam1105I GACNNNNNGTC 1 cut(s) 1990
EarI CTCTTC 4 cut(s) 413, 780, 1243, 1518
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 1 cut(s) 85
Eco130I CCWWGG 1 cut(s) 1673
Eco24I GRGCYC 2 cut(s) 87, 911
Eco31I GGTCTC 4 cut(s) 573, 702, 1426, 1749
Eco32I GATATC 1 cut(s) 1774
Eco47I GGWCC 2 cut(s) 835, 2111
Eco53kI GAGCTC 1 cut(s) 85
Eco57I CTGAAG 2 cut(s) 1422, 1800
Eco72I CACGTG 1 cut(s) 1382
Eco81I CCTNAGG 2 cut(s) 252, 1044
EcoICRI GAGCTC 1 cut(s) 85
EcoO109I RGGNCCY 2 cut(s) 835, 2111
EcoRII CCWGG 6 cut(s) 66, 902, 944, 1846, 1935, 2058
EcoRV GATATC 1 cut(s) 1774
EcoT14I CCWWGG 1 cut(s) 1673
EcoT38I GRGCYC 2 cut(s) 87, 911
ErhI CCWWGG 1 cut(s) 1673
FalI AAGNNNNNCTT 2 cut(s) 1544, 1576
FaqI GGGAC 2 cut(s) 441, 1601
FbaI TGATCA 1 cut(s) 354
Fnu4HI GCNGC 4 cut(s) 323, 326, 444, 2034
FokI GGATG 2 cut(s) 886, 1208
FriOI GRGCYC 2 cut(s) 87, 911
Fsp4HI GCNGC 4 cut(s) 323, 326, 444, 2034
GlaI GCGC 2 cut(s) 56, 345
GluI GCNGC 4 cut(s) 323, 326, 444, 2034
GsaI CCCAGC 1 cut(s) 1062
GsuI CTGGAG 3 cut(s) 291, 1413, 1480
HaeIII GGCC 3 cut(s) 257, 866, 1792
HapII CCGG 6 cut(s) 177, 231, 237, 258, 341, 564
HgaI GACGC 1 cut(s) 230
HhaI GCGC 2 cut(s) 57, 346
Hin1I GRCGYC 1 cut(s) 222
Hin6I GCGC 2 cut(s) 55, 344
HinP1I GCGC 2 cut(s) 55, 344
HincII GTYRAC 1 cut(s) 1030
HindII GTYRAC 1 cut(s) 1030
HindIII AAGCTT 2 cut(s) 1419, 1628
HinfI GANTC 9 cut(s) 227, 337, 385, 596, 607, 1001, 1442, 1614, 2000
HpaII CCGG 6 cut(s) 177, 231, 237, 258, 341, 564
HphI GGTGA 4 cut(s) 181, 553, 1010, 1286
Hpy166II GTNNAC 6 cut(s) 64, 217, 501, 1030, 1379, 1589
Hpy8I GTNNAC 6 cut(s) 64, 217, 501, 1030, 1379, 1589
Hpy99I CGWCG 2 cut(s) 122, 224
HpyAV CCTTC 8 cut(s) 202, 698, 826, 1252, 1394, 1446, 1775, 2102
HpyCH4III ACNGT 6 cut(s) 74, 466, 591, 1520, 1690, 1988
HpyCH4IV ACGT 3 cut(s) 1381, 1636, 1699
HpyF10VI GCNNNNNNNGC 4 cut(s) 674, 1016, 1893, 1967
HpyF3I CTNAG 9 cut(s) 252, 1044, 1194, 1226, 1292, 1444, 1533, 1737, 1908
HpySE526I ACGT 3 cut(s) 1381, 1636, 1699
Hsp92I GRCGYC 1 cut(s) 222
HspAI GCGC 2 cut(s) 55, 344
KpnI GGTACC 1 cut(s) 1043
Ksp22I TGATCA 1 cut(s) 354
LmnI GCTCC 4 cut(s) 82, 90, 179, 2062
Lsp1109I GCAGC 3 cut(s) 337, 455, 2020
MabI ACCWGGT 1 cut(s) 1935
MaeII ACGT 3 cut(s) 1381, 1636, 1699
MaeIII GTNAC 5 cut(s) 25, 853, 1261, 1471, 1514
MfeI CAATTG 1 cut(s) 1386
MflI RGATCY 3 cut(s) 147, 992, 1334
MhlI GDGCHC 3 cut(s) 87, 911, 1021
MluCI AATT 5 cut(s) 379, 1112, 1386, 1570, 1901
MlyI GAGTC 4 cut(s) 331, 394, 1436, 1623
MmeI TCCRAC 1 cut(s) 573
MroXI GAANNNNTTC 1 cut(s) 1785
MseI TTAA 6 cut(s) 614, 630, 738, 1511, 1562, 2134
MslI CAYNNNNRTG 1 cut(s) 435
MspA1I CMGCKG 1 cut(s) 1887
MspI CCGG 6 cut(s) 177, 231, 237, 258, 341, 564
MspR9I CCNGG 7 cut(s) 68, 565, 904, 946, 1848, 1937, 2060
MunI CAATTG 1 cut(s) 1386
Mva1269I GAATGC 1 cut(s) 668
MvaI CCWGG 6 cut(s) 68, 904, 946, 1848, 1937, 2060
MwoI GCNNNNNNNGC 4 cut(s) 674, 1016, 1893, 1967
NciI CCSGG 1 cut(s) 565
NlaIV GGNNCC 4 cut(s) 235, 968, 1041, 2064
NmuCI GTSAC 2 cut(s) 25, 1514
PagI TCATGA 1 cut(s) 535
PcsI WCGNNNNNNNCGW 1 cut(s) 123
PctI GAATGC 1 cut(s) 668
PdmI GAANNNNTTC 1 cut(s) 1785
PfeI GAWTC 5 cut(s) 227, 596, 607, 1001, 2000
PflFI GACNNNGTC 1 cut(s) 1952
PkrI GCNGC 4 cut(s) 324, 327, 445, 2035
PleI GAGTC 4 cut(s) 331, 393, 1436, 1622
PmaCI CACGTG 1 cut(s) 1382
PmlI CACGTG 1 cut(s) 1382
PpsI GAGTC 4 cut(s) 331, 393, 1436, 1622
Ppu21I YACGTR 2 cut(s) 1382, 1637
PpuMI RGGWCCY 2 cut(s) 835, 2111
PsiI TTATAA 1 cut(s) 1139
Psp124BI GAGCTC 1 cut(s) 87
Psp5II RGGWCCY 2 cut(s) 835, 2111
Psp6I CCWGG 6 cut(s) 66, 902, 944, 1846, 1935, 2058
PspCI CACGTG 1 cut(s) 1382
PspFI CCCAGC 1 cut(s) 1058
PspGI CCWGG 6 cut(s) 66, 902, 944, 1846, 1935, 2058
PspN4I GGNNCC 4 cut(s) 235, 968, 1041, 2064
PspPI GGNCC 2 cut(s) 835, 2111
PspPPI RGGWCCY 2 cut(s) 835, 2111
PsuI RGATCY 3 cut(s) 147, 992, 1334
PsyI GACNNNGTC 1 cut(s) 1952
RsaI GTAC 6 cut(s) 116, 500, 875, 1041, 1211, 1590
RsaNI GTAC 6 cut(s) 115, 499, 874, 1040, 1210, 1589
RseI CAYNNNNRTG 1 cut(s) 435
SacI GAGCTC 1 cut(s) 87
SaqAI TTAA 6 cut(s) 614, 630, 738, 1511, 1562, 2134
SatI GCNGC 4 cut(s) 323, 326, 444, 2034
Sau96I GGNCC 2 cut(s) 835, 2111
SchI GAGTC 4 cut(s) 331, 394, 1436, 1623
ScrFI CCNGG 7 cut(s) 68, 565, 904, 946, 1848, 1937, 2060
SduI GDGCHC 3 cut(s) 87, 911, 1021
SexAI ACCWGGT 1 cut(s) 1935
SfcI CTRYAG 1 cut(s) 1689
SinI GGWCC 2 cut(s) 835, 2111
SmiMI CAYNNNNRTG 1 cut(s) 435
SmlI CTYRAG 1 cut(s) 1746
SmoI CTYRAG 1 cut(s) 1746
SpeI ACTAGT 1 cut(s) 1181
Sse9I AATT 5 cut(s) 379, 1112, 1386, 1570, 1901
SsiI CCGC 5 cut(s) 5, 16, 323, 751, 1887
SspI AATATT 2 cut(s) 400, 1855
SstI GAGCTC 1 cut(s) 87
StyD4I CCNGG 7 cut(s) 66, 563, 902, 944, 1846, 1935, 2058
StyI CCWWGG 1 cut(s) 1673
TaaI ACNGT 6 cut(s) 74, 466, 591, 1520, 1690, 1988
TaiI ACGT 3 cut(s) 1384, 1639, 1702
TaqI TCGA 3 cut(s) 672, 1143, 1481
TasI AATT 5 cut(s) 379, 1112, 1386, 1570, 1901
TatI WGTACW 2 cut(s) 498, 1588
TauI GCSGC 1 cut(s) 325
TfiI GAWTC 5 cut(s) 227, 596, 607, 1001, 2000
Tru1I TTAA 6 cut(s) 614, 630, 738, 1511, 1562, 2134
Tru9I TTAA 6 cut(s) 614, 630, 738, 1511, 1562, 2134
TscAI CASTG 8 cut(s) 298, 378, 471, 811, 1296, 1525, 1720, 1972
TseFI GTSAC 2 cut(s) 25, 1514
TseI GCWGC 3 cut(s) 325, 443, 2033
Tsp45I GTSAC 2 cut(s) 25, 1514
TspDTI ATGAA 8 cut(s) 59, 299, 616, 996, 1068, 1413, 1931, 2013
TspGWI ACGGA 3 cut(s) 378, 588, 1241
TspRI CASTG 8 cut(s) 298, 378, 471, 811, 1296, 1525, 1720, 1972
Tth111I GACNNNGTC 1 cut(s) 1952
VpaK11BI GGWCC 2 cut(s) 835, 2111
XapI RAATTY 2 cut(s) 379, 1570
XcmI CCANNNNNNNNNTGG 1 cut(s) 952
XmaJI CCTAGG 1 cut(s) 1673
XmnI GAANNNNTTC 1 cut(s) 1785
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.