FvH4_5g13630
ERF Family

mTERF

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
7712006 .. 7714084
2079 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g13630.t1

Sequence Viewer

Length: 957 bp
ATGATCAAGAGTGTTTTGGAACATTCTAGGAGGTTTCAGATTGACCCAGATGGTGTTTTTGGGAGTGTGGAGGCTTTGAGGGGTTTAGGGTTTAAGGATGGTACTGTGTGTAGGGTTTTAGAGGGGTTTCCAGGGGTGGTGTTGATGAATGAGAGGGAGATAGGTAAGAGAGTTGAGTTCTTGGTGGGATTTGGGATTCCGAGGAATGGAATTGATCGGGTTCTTTGTTGTTTTCCAGGGGTTTTAGGATTTGGGGTTGAAGATAGATTGAAGCCATTGCTTTGTGAGTTTAAAGATTTTGGCTTTGGTAAGGATGTTATCAGGAGGGAGATTGTTAGAGAGCCAAGAGTTCTAGGCATGGAATTGGGTGAAGTTTCGTGGTGTTTGGAATGGTTGAGGACTTTGAAATGTAGGGAACCTATCAAGGAGAAGATTTACAGTAATGGAGAATTCCGAGCTGGCTTTGAGGTGAAGTTGAGAGTTGACTGCTTGTGCAAACATGGGTTGATACGTAGGGAGGCTTTTGAGGTGTTGTGGAAGGAGCCGAGGTCAATCATATATGATGTAAAGGACATTGAGAGGAAGATTGAGTTTTTAACACAGAAGATGAAATTCAATATTCGTTGTTTGGTTGAAGTTCCGGAGTACTTGGGTGTGAATTTTAGGAAGCAAATCCTTCCTCGGTTCAATGTGATAGAGCATTTGCGATCAAAAGGTGGGCTTGGTTGCGATGTGGGGTTAAAGGGTCTGATCAAGCCTAGCAGGCTTAAATTCTATAACCTGTATGTGAAGCCATATCCGGACTGTGAGAAGATATTTGGAAGACTTTCAGGAGATGGTAAAGTACGAAACCAACATCCTGCTGGACTATGGAAACTATTTAAGCCACCAAGTTATCCAGAATCGAATGATGATGTGAGGAACACAAAGTCATTTATGGAATCACTAGGTCATTGA

Protein Analysis

319

Amino Acids

36.67

Weight (kDa)

9.24

Isoelectric Point (pI)

33.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mTERF PF02536 23 - 122 9.9e-09 mTERF
mTERF PF02536 81 - 239 2.5e-14 mTERF
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016657)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74120
fragaria_vesca FvH4_5g13630
malus_domestica MD14G1214100.v1.1
prunus_persica Prupe.5G207400_v2.0.a1
pyrus_communis pycom14g17750
rosa_chinensis RchiOBHm_Chr7g0183331
rosa_laevigata RLG00000005056
rosa_multiflora Rmu_sc0029438.1_g000001
rosa_roxburghii Rroxscaffold_3G00270570
rosa_samantha Rh7AG058200 Rh7BG058000 Rh7CG059600 Rh7DG057900
rosa_wichuraiana Rw7G004780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 2 cut(s) 640, 799
AcsI RAATTY 4 cut(s) 449, 611, 658, 770
AfaI GTAC 3 cut(s) 103, 647, 846
AfiI CCNNNNNNNGG 1 cut(s) 206
AgsI TTSAA 6 cut(s) 260, 271, 406, 616, 635, 688
AjnI CCWGG 2 cut(s) 130, 235
AluBI AGCT 1 cut(s) 458
AluI AGCT 1 cut(s) 458
Aor13HI TCCGGA 2 cut(s) 640, 799
ApoI RAATTY 4 cut(s) 449, 611, 658, 770
Asp700I GAANNNNTTC 1 cut(s) 826
AsuHPI GGTGA 2 cut(s) 380, 481
BbsI GAAGAC 1 cut(s) 829
BccI CCATC 3 cut(s) 44, 92, 830
BciT130I CCWGG 2 cut(s) 132, 237
BclI TGATCA 2 cut(s) 3, 750
BfaI CTAG 4 cut(s) 27, 353, 759, 947
BglI GCCNNNNNGGC 1 cut(s) 763
BmcAI AGTACT 1 cut(s) 647
Bme1390I CCNGG 2 cut(s) 132, 237
BmiI GGNNCC 2 cut(s) 417, 543
BmrFI CCNGG 2 cut(s) 132, 237
BpiI GAAGAC 1 cut(s) 829
BsaAI YACGTR 1 cut(s) 512
BsaJI CCNNGG 5 cut(s) 131, 200, 236, 545, 680
BsaWI WCCGGW 2 cut(s) 640, 799
BsaXI ACNNNNNCTCC 2 cut(s) 533, 563
Bsc4I CCNNNNNNNGG 1 cut(s) 206
Bse3DI GCAATG 1 cut(s) 275
BseAI TCCGGA 2 cut(s) 640, 799
BseBI CCWGG 2 cut(s) 132, 237
BseDI CCNNGG 5 cut(s) 131, 200, 236, 545, 680
BseGI GGATG 3 cut(s) 103, 319, 856
BseLI CCNNNNNNNGG 1 cut(s) 206
BseMI GCAATG 1 cut(s) 275
BsiSI CCGG 2 cut(s) 641, 800
BslI CCNNNNNNNGG 1 cut(s) 206
Bsp13I TCCGGA 2 cut(s) 640, 799
Bsp143I GATC 4 cut(s) 3, 214, 707, 750
BspEI TCCGGA 2 cut(s) 640, 799
BspLI GGNNCC 2 cut(s) 417, 543
BsrDI GCAATG 1 cut(s) 275
BssECI CCNNGG 5 cut(s) 131, 200, 236, 545, 680
BssMI GATC 4 cut(s) 3, 214, 707, 750
Bst2UI CCWGG 2 cut(s) 132, 237
Bst4CI ACNGT 3 cut(s) 106, 440, 806
BstBAI YACGTR 1 cut(s) 512
BstC8I GCNNGC 2 cut(s) 460, 764
BstF5I GGATG 3 cut(s) 103, 319, 856
BstKTI GATC 4 cut(s) 6, 217, 710, 753
BstMBI GATC 4 cut(s) 3, 214, 707, 750
BstMWI GCNNNNNNNGC 1 cut(s) 763
BstNI CCWGG 2 cut(s) 132, 237
BstSCI CCNGG 2 cut(s) 130, 235
BstSNI TACGTA 1 cut(s) 512
BstV2I GAAGAC 1 cut(s) 829
BtgZI GCGATG 1 cut(s) 744
BtsCI GGATG 3 cut(s) 103, 319, 856
Cac8I GCNNGC 2 cut(s) 460, 764
Csp6I GTAC 3 cut(s) 102, 646, 845
CviAII CATG 2 cut(s) 358, 500
CviQI GTAC 3 cut(s) 102, 646, 845
DpnI GATC 4 cut(s) 5, 216, 709, 752
DpnII GATC 4 cut(s) 3, 214, 707, 750
DraI TTTAAA 1 cut(s) 292
Eco105I TACGTA 1 cut(s) 512
EcoRI GAATTC 1 cut(s) 449
EcoRII CCWGG 2 cut(s) 130, 235
FaeI CATG 2 cut(s) 361, 503
FalI AAGNNNNNCTT 2 cut(s) 705, 737
FatI CATG 2 cut(s) 357, 499
FbaI TGATCA 2 cut(s) 3, 750
FokI GGATG 3 cut(s) 110, 326, 843
FspBI CTAG 4 cut(s) 27, 353, 759, 947
HapII CCGG 2 cut(s) 641, 800
Hin1II CATG 2 cut(s) 361, 503
HincII GTYRAC 1 cut(s) 484
HindII GTYRAC 1 cut(s) 484
HinfI GANTC 3 cut(s) 196, 902, 941
HpaII CCGG 2 cut(s) 641, 800
HphI GGTGA 2 cut(s) 380, 481
Hpy166II GTNNAC 1 cut(s) 484
Hpy188I TCNGA 4 cut(s) 39, 201, 455, 750
Hpy188III TCNNGA 6 cut(s) 7, 322, 641, 800, 831, 899
Hpy8I GTNNAC 1 cut(s) 484
HpyAV CCTTC 2 cut(s) 532, 686
HpyCH4III ACNGT 3 cut(s) 106, 440, 806
HpyCH4IV ACGT 1 cut(s) 511
HpyCH4V TGCA 1 cut(s) 495
HpyF10VI GCNNNNNNNGC 1 cut(s) 763
HpySE526I ACGT 1 cut(s) 511
Hsp92II CATG 2 cut(s) 361, 503
Kpn2I TCCGGA 2 cut(s) 640, 799
Ksp22I TGATCA 2 cut(s) 3, 750
Kzo9I GATC 4 cut(s) 3, 214, 707, 750
LmnI GCTCC 1 cut(s) 541
MaeI CTAG 4 cut(s) 27, 353, 759, 947
MaeII ACGT 1 cut(s) 511
MalI GATC 4 cut(s) 5, 216, 709, 752
MboI GATC 4 cut(s) 3, 214, 707, 750
MboII GAAGA 6 cut(s) 272, 442, 595, 616, 823, 834
MluCI AATT 6 cut(s) 210, 362, 449, 611, 658, 770
MroI TCCGGA 2 cut(s) 640, 799
MroXI GAANNNNTTC 1 cut(s) 826
MseI TTAA 6 cut(s) 93, 291, 596, 740, 768, 882
MspI CCGG 2 cut(s) 641, 800
MspR9I CCNGG 2 cut(s) 132, 237
MvaI CCWGG 2 cut(s) 132, 237
MwoI GCNNNNNNNGC 1 cut(s) 763
NdeII GATC 4 cut(s) 3, 214, 707, 750
NlaIII CATG 2 cut(s) 361, 503
NlaIV GGNNCC 2 cut(s) 417, 543
NmeAIII GCCGAG 1 cut(s) 570
PdmI GAANNNNTTC 1 cut(s) 826
PfeI GAWTC 3 cut(s) 196, 902, 941
Ppu21I YACGTR 1 cut(s) 512
Psp6I CCWGG 2 cut(s) 130, 235
PspGI CCWGG 2 cut(s) 130, 235
PspN4I GGNNCC 2 cut(s) 417, 543
RsaI GTAC 3 cut(s) 103, 647, 846
RsaNI GTAC 3 cut(s) 102, 646, 845
SaqAI TTAA 6 cut(s) 93, 291, 596, 740, 768, 882
Sau3AI GATC 4 cut(s) 3, 214, 707, 750
ScaI AGTACT 1 cut(s) 647
ScrFI CCNGG 2 cut(s) 132, 237
SnaBI TACGTA 1 cut(s) 512
Sse9I AATT 6 cut(s) 210, 362, 449, 611, 658, 770
SspI AATATT 1 cut(s) 619
SspMI CTAG 4 cut(s) 27, 353, 759, 947
StyD4I CCNGG 2 cut(s) 130, 235
TaaI ACNGT 3 cut(s) 106, 440, 806
TaiI ACGT 1 cut(s) 514
TaqI TCGA 1 cut(s) 905
TasI AATT 6 cut(s) 210, 362, 449, 611, 658, 770
TatI WGTACW 1 cut(s) 645
TfiI GAWTC 3 cut(s) 196, 902, 941
Tru1I TTAA 6 cut(s) 93, 291, 596, 740, 768, 882
Tru9I TTAA 6 cut(s) 93, 291, 596, 740, 768, 882
TspDTI ATGAA 2 cut(s) 161, 623
XapI RAATTY 4 cut(s) 449, 611, 658, 770
XcmI CCANNNNNNNNNTGG 1 cut(s) 860
XmnI GAANNNNTTC 1 cut(s) 826
XspI CTAG 4 cut(s) 27, 353, 759, 947
ZrmI AGTACT 1 cut(s) 647
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.