FvH4_5g14830

Cyclic dof factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0013861
Physical Location & Seq
Reverse (-)
8416335 .. 8419227
2893 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g14830.t1

Sequence Viewer

Length: 1389 bp
ATGCTGCTCGAAGCTAAGGACCCGGCGATCAAGCTTTTCGGCATGAAGATTCCGCTTCCGGCCGGCGCCGACGACGAGGACTTGAGGTTTACTTCGCTGGCCAGAGAGGAAAAACGATCGCGAGTTGATAATCAAGAAGAGGATGTAGAAGACAAGGATTCACCATCAACAAAAGCCACTGAGAGCATAGAAGAACAAGATGATTCTCCAAAAACTGAAGACTCAACCAGTATGGAAATGCTACCAGAATGTAATGTGAACCCAAAAACACCCTCAATCGATGAAGAAAGCGCAAAACCAAAATCTCCGGAGGAGAAAGAACAGAATGATGCAACCAACTCGAAAGAGAAAACCCTGAAGAAGCCTGACAAGATACTACCATGCCCTCGCTGCAATAGCATGGACACTAAATTTTGTTACTACAACAATTACAATGTCAATCAACCACGCCATTTCTGCAAGGCCTGTCAAAGATACTGGACTGCAGGCGGTACAATGAGGAATGTGCCTGTAGGAGCTGGTCGTAGGAAGAACAAGAACTCTGCCTCACACTATCGCCAGATCACAATTTCCGATGCTCTTCAAGTAGCTCGAATGGATGCTCCAAATGGAGCTCACCACCCCGGATTGAAAAGCAATGGCAGAGTCCTTAGCTTTGGCGTAGATACACCAGTCTGTGATTCCATGGCTTCTGTTTTAAACCTTGCAAATAAAAAGGTCTTAAATGGTACTACTCGAAATGGATTCCATAAGAGCGAAGAATTAGTATTTCCAGCTCCTTGCAAGGACAAAGAAAATGGTGATGATATAACAGCTTCGAAACCACAAATTCCAAATGCCAATGGCTTCTCCTCACATATTCCATGTCTTCCTGGTGTTCCTTGGCCGTATCAATGGAATTCCGCAGTTCCCCCACCGGCTTTTGCCCCTCCGGGAATGCCTATACCAGTGTTTCCTGCACCTTATTGGAATTGTGGCATCCCTTTCCAAGTACCAGTTCCTTGGTTCAATCCACAGCCTGCTTCTCCAAACCAAAAGACTCCAAACTCTGCCTCAAGTTCTCCAATTCTGGGGAAGCATTCAAGGGAGCGAGAGATTCTCAGACCAGAAGTTCACTTGGAGAAAGAAGAGCCATCGAAACAGAAAAATGGATGTGTTCTGGTTCCGAAAACATTAAGGATTGATGACCCAAGTGAGGCTGCAAAGAGTTCGATATGGTCAACACTTGGGATCAAGAACGATTGCATCAGCAGCGGGAAAGGGCTGTTTAAGGCCTTCCAATCACAATCAAAGGGTGATCAAAAGAAACATGTCCTTGAAACCTCTCCGGCTATGCTAGCCAACCCAGCAGCCTTGTCTAGATCACTCAACTTCCACGAGAGCACTTGA

Protein Analysis

463

Amino Acids

50.91

Weight (kDa)

7.9

Isoelectric Point (pI)

57.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Zn_ribbon_Dof PF02701 124 - 180 4.9e-33 Dof domain, zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013861)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47500
fragaria_vesca FvH4_5g14830
malus_domestica MD06G1194500.v1.1 MD14G1201600.v1.1
prunus_persica Prupe.5G194600_v2.0.a1
pyrus_communis pycom06g17220 pycom14g16700
rosa_chinensis RchiOBHm_Chr7g0181561
rosa_laevigata RLG00000005183
rosa_multiflora Rmu_sc0000988.1_g000022
rosa_roxburghii Rroxscaffold_3G00271900
rosa_rugosa Rorug06G0442200
rosa_samantha Rh7AG044400 Rh7BG043400 Rh7CG045200 Rh7DG044000
rosa_wichuraiana Rw7G003680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 65
AccII CGCG 1 cut(s) 121
AccIII TCCGGA 1 cut(s) 307
AciI CCGC 4 cut(s) 53, 489, 903, 1254
AclWI GGATC 1 cut(s) 1238
AcoI YGGCCR 3 cut(s) 60, 99, 884
AcsI RAATTY 3 cut(s) 410, 828, 898
AcuI CTGAAG 2 cut(s) 237, 377
AcyI GRCGYC 1 cut(s) 66
AfaI GTAC 3 cut(s) 493, 730, 993
AfiI CCNNNNNNNGG 2 cut(s) 1070, 1195
AflIII ACRYGT 1 cut(s) 1309
AgsI TTSAA 5 cut(s) 584, 631, 1009, 1083, 1319
AjnI CCWGG 1 cut(s) 871
AjuI GAANNNNNNNTTGG 2 cut(s) 981, 1013
AluBI AGCT 8 cut(s) 14, 34, 518, 590, 614, 654, 776, 815
AluI AGCT 8 cut(s) 14, 34, 518, 590, 614, 654, 776, 815
Alw21I GWGCWC 2 cut(s) 616, 1385
AlwI GGATC 1 cut(s) 1238
Aor13HI TCCGGA 1 cut(s) 307
AoxI GGCC 5 cut(s) 60, 99, 462, 884, 1272
ApeKI GCWGC 5 cut(s) 4, 390, 1199, 1251, 1349
ApoI RAATTY 3 cut(s) 410, 828, 898
AspLEI GCGC 2 cut(s) 68, 293
AspS9I GGNCC 1 cut(s) 19
AsuC2I CCSGG 3 cut(s) 23, 624, 933
AsuHPI GGTGA 4 cut(s) 153, 608, 812, 1307
AsuII TTCGAA 1 cut(s) 818
AsuNHI GCTAGC 1 cut(s) 1336
AvaII GGWCC 1 cut(s) 19
BaeI ACNNNNGTAYC 2 cut(s) 657, 690
BalI TGGCCA 1 cut(s) 101
BanI GGYRCC 1 cut(s) 65
BanII GRGCYC 1 cut(s) 616
BauI CACGAG 1 cut(s) 1376
BbsI GAAGAC 3 cut(s) 156, 225, 860
Bbv12I GWGCWC 2 cut(s) 616, 1385
BbvI GCAGC 4 cut(s) 377, 1186, 1263, 1361
BccI CCATC 2 cut(s) 172, 1141
BceAI ACGGC 1 cut(s) 871
BcgI CGANNNNNNTGC 4 cut(s) 321, 355, 1191, 1225
BciT130I CCWGG 1 cut(s) 873
BclI TGATCA 1 cut(s) 1297
BcnI CCSGG 3 cut(s) 23, 624, 933
BfaI CTAG 2 cut(s) 1337, 1359
BfmI CTRYAG 2 cut(s) 483, 510
BfoI RGCGCY 1 cut(s) 69
BisI GCNGC 5 cut(s) 5, 391, 1200, 1252, 1350
BlsI GCNGC 5 cut(s) 6, 392, 1201, 1253, 1351
Bme1390I CCNGG 4 cut(s) 23, 624, 873, 933
Bme18I GGWCC 1 cut(s) 19
BmgT120I GGNCC 1 cut(s) 19
BmiI GGNNCC 3 cut(s) 21, 67, 1164
BmrFI CCNGG 4 cut(s) 23, 624, 873, 933
BmsI GCATC 5 cut(s) 319, 565, 589, 987, 1254
BmtI GCTAGC 1 cut(s) 1340
BpiI GAAGAC 3 cut(s) 156, 225, 860
BplI GAGNNNNNCTC 2 cut(s) 1083, 1115
Bpu10I CCTNAGC 2 cut(s) 15, 650
Bpu14I TTCGAA 1 cut(s) 818
BpuEI CTTGAG 2 cut(s) 103, 1039
BpuMI CCSGG 3 cut(s) 23, 624, 933
Bsa29I ATCGAT 1 cut(s) 279
BsaHI GRCGYC 1 cut(s) 66
BsaJI CCNNGG 4 cut(s) 622, 684, 881, 1001
BsaWI WCCGGW 1 cut(s) 307
Bsc4I CCNNNNNNNGG 2 cut(s) 1070, 1195
Bse118I RCCGGY 2 cut(s) 62, 916
Bse1I ACTGG 5 cut(s) 228, 482, 671, 947, 995
Bse3DI GCAATG 1 cut(s) 643
BseAI TCCGGA 1 cut(s) 307
BseBI CCWGG 1 cut(s) 873
BseCI ATCGAT 1 cut(s) 279
BseDI CCNNGG 4 cut(s) 622, 684, 881, 1001
BseGI GGATG 4 cut(s) 148, 604, 978, 1157
BseLI CCNNNNNNNGG 2 cut(s) 1070, 1195
BseMI GCAATG 1 cut(s) 643
BseMII CTCAG 2 cut(s) 171, 1114
BseNI ACTGG 5 cut(s) 228, 482, 671, 947, 995
BseRI GAGGAG 2 cut(s) 326, 841
BseX3I CGGCCG 1 cut(s) 60
BseXI GCAGC 4 cut(s) 377, 1186, 1263, 1361
BseYI CCCAGC 1 cut(s) 1345
BsgI GTGCAG 1 cut(s) 942
Bsh1236I CGCG 1 cut(s) 121
Bsh1285I CGRYCG 2 cut(s) 63, 119
BshFI GGCC 5 cut(s) 62, 101, 464, 886, 1274
BshNI GGYRCC 1 cut(s) 65
BshVI ATCGAT 1 cut(s) 279
BsiEI CGRYCG 2 cut(s) 63, 119
BsiHKAI GWGCWC 2 cut(s) 616, 1385
BsiSI CCGG 8 cut(s) 23, 59, 63, 308, 624, 917, 932, 1328
BslI CCNNNNNNNGG 2 cut(s) 1070, 1195
BsmI GAATGC 2 cut(s) 942, 1078
BsnI GGCC 5 cut(s) 62, 101, 464, 886, 1274
Bsp119I TTCGAA 1 cut(s) 818
Bsp1286I GDGCHC 2 cut(s) 616, 1385
Bsp13I TCCGGA 1 cut(s) 307
Bsp143I GATC 6 cut(s) 27, 116, 561, 1230, 1297, 1361
Bsp19I CCATGG 1 cut(s) 684
Bsp68I TCGCGA 1 cut(s) 121
BspACI CCGC 4 cut(s) 53, 489, 903, 1254
BspANI GGCC 5 cut(s) 62, 101, 464, 886, 1274
BspCNI CTCAG 2 cut(s) 172, 1113
BspDI ATCGAT 1 cut(s) 279
BspEI TCCGGA 1 cut(s) 307
BspFNI CGCG 1 cut(s) 121
BspLI GGNNCC 3 cut(s) 21, 67, 1164
BspMAI CTGCAG 1 cut(s) 487
BspOI GCTAGC 1 cut(s) 1340
BspPI GGATC 1 cut(s) 1238
BspQI GCTCTTC 2 cut(s) 585, 1122
BspT104I TTCGAA 1 cut(s) 818
BspT107I GGYRCC 1 cut(s) 65
BsrDI GCAATG 1 cut(s) 643
BsrFI RCCGGY 2 cut(s) 62, 916
BsrI ACTGG 5 cut(s) 228, 482, 671, 947, 995
BssAI RCCGGY 2 cut(s) 62, 916
BssECI CCNNGG 4 cut(s) 622, 684, 881, 1001
BssMI GATC 6 cut(s) 27, 116, 561, 1230, 1297, 1361
BssNI GRCGYC 1 cut(s) 66
BssSI CACGAG 1 cut(s) 1376
BssT1I CCWWGG 3 cut(s) 684, 881, 1001
Bst2BI CACGAG 1 cut(s) 1376
Bst2UI CCWGG 1 cut(s) 873
Bst6I CTCTTC 3 cut(s) 132, 585, 1122
BstACI GRCGYC 1 cut(s) 66
BstBI TTCGAA 1 cut(s) 818
BstC8I GCNNGC 5 cut(s) 64, 99, 487, 1020, 1338
BstDEI CTNAG 4 cut(s) 15, 180, 650, 1100
BstDSI CCRYGG 1 cut(s) 684
BstF5I GGATG 4 cut(s) 148, 604, 978, 1157
BstFNI CGCG 1 cut(s) 121
BstH2I RGCGCY 1 cut(s) 69
BstHHI GCGC 2 cut(s) 68, 293
BstKTI GATC 6 cut(s) 30, 119, 564, 1233, 1300, 1364
BstMBI GATC 6 cut(s) 27, 116, 561, 1230, 1297, 1361
BstMCI CGRYCG 2 cut(s) 63, 119
BstMWI GCNNNNNNNGC 6 cut(s) 390, 396, 456, 1251, 1337, 1346
BstNI CCWGG 1 cut(s) 873
BstNSI RCATGY 1 cut(s) 1313
BstSCI CCNGG 4 cut(s) 21, 622, 871, 931
BstSFI CTRYAG 2 cut(s) 483, 510
BstUI CGCG 1 cut(s) 121
BstV1I GCAGC 4 cut(s) 377, 1186, 1263, 1361
BstV2I GAAGAC 3 cut(s) 156, 225, 860
BstXI CCANNNNNNTGG 1 cut(s) 1002
BstZI CGGCCG 1 cut(s) 60
Bsu15I ATCGAT 1 cut(s) 279
BsuRI GGCC 5 cut(s) 62, 101, 464, 886, 1274
BsuTUI ATCGAT 1 cut(s) 279
BtgI CCRYGG 1 cut(s) 684
BtsCI GGATG 4 cut(s) 148, 604, 978, 1157
BtsIMutI CAGTG 2 cut(s) 177, 954
BtuMI TCGCGA 1 cut(s) 121
Cac8I GCNNGC 5 cut(s) 64, 99, 487, 1020, 1338
CfoI GCGC 2 cut(s) 68, 293
Cfr10I RCCGGY 2 cut(s) 62, 916
Cfr13I GGNCC 1 cut(s) 19
ClaI ATCGAT 1 cut(s) 279
Csp6I GTAC 3 cut(s) 492, 729, 992
CviAII CATG 6 cut(s) 43, 381, 400, 685, 864, 1310
CviQI GTAC 3 cut(s) 492, 729, 992
DdeI CTNAG 4 cut(s) 15, 180, 650, 1100
DinI GGCGCC 1 cut(s) 67
DpnI GATC 6 cut(s) 29, 118, 563, 1232, 1299, 1363
DpnII GATC 6 cut(s) 27, 116, 561, 1230, 1297, 1361
DraI TTTAAA 1 cut(s) 699
EaeI YGGCCR 3 cut(s) 60, 99, 884
EagI CGGCCG 1 cut(s) 60
Eam1104I CTCTTC 3 cut(s) 132, 585, 1122
EarI CTCTTC 3 cut(s) 132, 585, 1122
Ecl136II GAGCTC 1 cut(s) 614
EclXI CGGCCG 1 cut(s) 60
Eco130I CCWWGG 3 cut(s) 684, 881, 1001
Eco147I AGGCCT 2 cut(s) 464, 1274
Eco24I GRGCYC 1 cut(s) 616
Eco47I GGWCC 1 cut(s) 19
Eco52I CGGCCG 1 cut(s) 60
Eco53kI GAGCTC 1 cut(s) 614
Eco57I CTGAAG 2 cut(s) 237, 377
EcoICRI GAGCTC 1 cut(s) 614
EcoO109I RGGNCCY 1 cut(s) 19
EcoRI GAATTC 1 cut(s) 898
EcoRII CCWGG 1 cut(s) 871
EcoT14I CCWWGG 3 cut(s) 684, 881, 1001
EcoT38I GRGCYC 1 cut(s) 616
EgeI GGCGCC 1 cut(s) 67
EheI GGCGCC 1 cut(s) 67
ErhI CCWWGG 3 cut(s) 684, 881, 1001
FaeI CATG 6 cut(s) 46, 384, 403, 688, 867, 1313
FatI CATG 6 cut(s) 42, 380, 399, 684, 863, 1309
FauI CCCGC 1 cut(s) 1247
FbaI TGATCA 1 cut(s) 1297
Fnu4HI GCNGC 5 cut(s) 5, 391, 1200, 1252, 1350
FokI GGATG 4 cut(s) 155, 611, 965, 1164
FriOI GRGCYC 1 cut(s) 616
Fsp4HI GCNGC 5 cut(s) 5, 391, 1200, 1252, 1350
FspBI CTAG 2 cut(s) 1337, 1359
GlaI GCGC 2 cut(s) 67, 292
GluI GCNGC 5 cut(s) 5, 391, 1200, 1252, 1350
GsaI CCCAGC 1 cut(s) 1349
HaeII RGCGCY 1 cut(s) 69
HaeIII GGCC 5 cut(s) 62, 101, 464, 886, 1274
HapII CCGG 8 cut(s) 23, 59, 63, 308, 624, 917, 932, 1328
HhaI GCGC 2 cut(s) 68, 293
Hin1I GRCGYC 1 cut(s) 66
Hin1II CATG 6 cut(s) 46, 384, 403, 688, 867, 1313
Hin6I GCGC 2 cut(s) 66, 291
HinP1I GCGC 2 cut(s) 66, 291
HincII GTYRAC 1 cut(s) 1221
HindII GTYRAC 1 cut(s) 1221
HindIII AAGCTT 1 cut(s) 32
HinfI GANTC 9 cut(s) 49, 158, 203, 221, 645, 680, 744, 1039, 1096
HpaII CCGG 8 cut(s) 23, 59, 63, 308, 624, 917, 932, 1328
HphI GGTGA 4 cut(s) 153, 608, 812, 1307
Hpy166II GTNNAC 4 cut(s) 90, 259, 1114, 1221
Hpy188I TCNGA 3 cut(s) 574, 1103, 1167
Hpy188III TCNNGA 5 cut(s) 120, 134, 308, 1234, 1359
Hpy8I GTNNAC 4 cut(s) 90, 259, 1114, 1221
Hpy99I CGWCG 2 cut(s) 74, 77
HpyAV CCTTC 1 cut(s) 1285
HpyCH4V TGCA 9 cut(s) 332, 393, 459, 485, 707, 783, 959, 1202, 1245
HpyF10VI GCNNNNNNNGC 6 cut(s) 390, 396, 456, 1251, 1337, 1346
HpyF3I CTNAG 4 cut(s) 15, 180, 650, 1100
Hsp92I GRCGYC 1 cut(s) 66
Hsp92II CATG 6 cut(s) 46, 384, 403, 688, 867, 1313
HspAI GCGC 2 cut(s) 66, 291
KasI GGCGCC 1 cut(s) 65
Kpn2I TCCGGA 1 cut(s) 307
KroI GCCGGC 1 cut(s) 62
KroNI GCCGGC 1 cut(s) 64
Ksp22I TGATCA 1 cut(s) 1297
Kzo9I GATC 6 cut(s) 27, 116, 561, 1230, 1297, 1361
LguI GCTCTTC 2 cut(s) 585, 1122
LmnI GCTCC 5 cut(s) 515, 607, 611, 781, 1087
Lsp1109I GCAGC 4 cut(s) 377, 1186, 1263, 1361
LweI GCATC 5 cut(s) 319, 565, 589, 987, 1254
MaeI CTAG 2 cut(s) 1337, 1359
MaeIII GTNAC 1 cut(s) 416
MalI GATC 6 cut(s) 29, 118, 563, 1232, 1299, 1363
MboI GATC 6 cut(s) 27, 116, 561, 1230, 1297, 1361
MhlI GDGCHC 2 cut(s) 616, 1385
MlsI TGGCCA 1 cut(s) 101
MluCI AATT 8 cut(s) 410, 427, 567, 761, 828, 898, 970, 1065
MluNI TGGCCA 1 cut(s) 101
Mly113I GGCGCC 1 cut(s) 66
MlyI GAGTC 3 cut(s) 215, 654, 1033
Mox20I TGGCCA 1 cut(s) 101
MroI TCCGGA 1 cut(s) 307
MroNI GCCGGC 1 cut(s) 62
MscI TGGCCA 1 cut(s) 101
MseI TTAA 4 cut(s) 698, 722, 1175, 1269
Msp20I TGGCCA 1 cut(s) 101
MspA1I CMGCKG 1 cut(s) 1254
MspI CCGG 8 cut(s) 23, 59, 63, 308, 624, 917, 932, 1328
MspR9I CCNGG 4 cut(s) 23, 624, 873, 933
Mva1269I GAATGC 2 cut(s) 942, 1078
MvaI CCWGG 1 cut(s) 873
MvnI CGCG 1 cut(s) 121
MwoI GCNNNNNNNGC 6 cut(s) 390, 396, 456, 1251, 1337, 1346
NaeI GCCGGC 1 cut(s) 64
NarI GGCGCC 1 cut(s) 66
NciI CCSGG 3 cut(s) 23, 624, 933
NcoI CCATGG 1 cut(s) 684
NdeII GATC 6 cut(s) 27, 116, 561, 1230, 1297, 1361
NgoMIV GCCGGC 1 cut(s) 62
NheI GCTAGC 1 cut(s) 1336
NlaIII CATG 6 cut(s) 46, 384, 403, 688, 867, 1313
NlaIV GGNNCC 3 cut(s) 21, 67, 1164
NruI TCGCGA 1 cut(s) 121
NspI RCATGY 1 cut(s) 1313
NspV TTCGAA 1 cut(s) 818
PceI AGGCCT 2 cut(s) 464, 1274
PciI ACATGT 1 cut(s) 1309
PciSI GCTCTTC 2 cut(s) 585, 1122
PctI GAATGC 2 cut(s) 942, 1078
PdiI GCCGGC 1 cut(s) 64
PfeI GAWTC 6 cut(s) 49, 158, 203, 680, 744, 1096
PfoI TCCNGGA 1 cut(s) 931
PkrI GCNGC 5 cut(s) 6, 392, 1201, 1253, 1351
Ple19I CGATCG 1 cut(s) 119
PleI GAGTC 3 cut(s) 215, 653, 1033
PluTI GGCGCC 1 cut(s) 69
PpsI GAGTC 3 cut(s) 215, 653, 1033
PpuMI RGGWCCY 1 cut(s) 19
PscI ACATGT 1 cut(s) 1309
Psp124BI GAGCTC 1 cut(s) 616
Psp5II RGGWCCY 1 cut(s) 19
Psp6I CCWGG 1 cut(s) 871
PspFI CCCAGC 1 cut(s) 1345
PspGI CCWGG 1 cut(s) 871
PspN4I GGNNCC 3 cut(s) 21, 67, 1164
PspPI GGNCC 1 cut(s) 19
PspPPI RGGWCCY 1 cut(s) 19
PstI CTGCAG 1 cut(s) 487
PvuI CGATCG 1 cut(s) 119
RruI TCGCGA 1 cut(s) 121
RsaI GTAC 3 cut(s) 493, 730, 993
RsaNI GTAC 3 cut(s) 492, 729, 992
SacI GAGCTC 1 cut(s) 616
SapI GCTCTTC 2 cut(s) 585, 1122
SaqAI TTAA 4 cut(s) 698, 722, 1175, 1269
SatI GCNGC 5 cut(s) 5, 391, 1200, 1252, 1350
Sau3AI GATC 6 cut(s) 27, 116, 561, 1230, 1297, 1361
Sau96I GGNCC 1 cut(s) 19
SchI GAGTC 3 cut(s) 215, 654, 1033
ScrFI CCNGG 4 cut(s) 23, 624, 873, 933
SduI GDGCHC 2 cut(s) 616, 1385
SfaNI GCATC 5 cut(s) 319, 565, 589, 987, 1254
SfcI CTRYAG 2 cut(s) 483, 510
SfoI GGCGCC 1 cut(s) 67
SfuI TTCGAA 1 cut(s) 818
SinI GGWCC 1 cut(s) 19
SmlI CTYRAG 2 cut(s) 82, 1054
SmoI CTYRAG 2 cut(s) 82, 1054
Sse9I AATT 8 cut(s) 410, 427, 567, 761, 828, 898, 970, 1065
SseBI AGGCCT 2 cut(s) 464, 1274
SsiI CCGC 4 cut(s) 53, 489, 903, 1254
SspDI GGCGCC 1 cut(s) 65
SspMI CTAG 2 cut(s) 1337, 1359
SstI GAGCTC 1 cut(s) 616
StuI AGGCCT 2 cut(s) 464, 1274
StyD4I CCNGG 4 cut(s) 21, 622, 871, 931
StyI CCWWGG 3 cut(s) 684, 881, 1001
TaqI TCGA 8 cut(s) 9, 279, 341, 592, 736, 818, 1136, 1211
TasI AATT 8 cut(s) 410, 427, 567, 761, 828, 898, 970, 1065
TfiI GAWTC 6 cut(s) 49, 158, 203, 680, 744, 1096
Tru1I TTAA 4 cut(s) 698, 722, 1175, 1269
Tru9I TTAA 4 cut(s) 698, 722, 1175, 1269
TscAI CASTG 2 cut(s) 184, 954
TseI GCWGC 5 cut(s) 4, 390, 1199, 1251, 1349
TspDTI ATGAA 2 cut(s) 59, 297
TspRI CASTG 2 cut(s) 184, 954
VpaK11BI GGWCC 1 cut(s) 19
XapI RAATTY 3 cut(s) 410, 828, 898
XbaI TCTAGA 1 cut(s) 1358
XceI RCATGY 1 cut(s) 1313
XspI CTAG 2 cut(s) 1337, 1359
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.