Cyclic dof factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G47500 |
| fragaria_vesca | FvH4_5g14830 |
| malus_domestica | MD06G1194500.v1.1 MD14G1201600.v1.1 |
| prunus_persica | Prupe.5G194600_v2.0.a1 |
| pyrus_communis | pycom06g17220 pycom14g16700 |
| rosa_chinensis | RchiOBHm_Chr7g0181561 |
| rosa_laevigata | RLG00000005183 |
| rosa_multiflora | Rmu_sc0000988.1_g000022 |
| rosa_roxburghii | Rroxscaffold_3G00271900 |
| rosa_rugosa | Rorug06G0442200 |
| rosa_samantha | Rh7AG044400 Rh7BG043400 Rh7CG045200 Rh7DG044000 |
| rosa_wichuraiana | Rw7G003680 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 644 |
| AatII | GACGTC | 1 cut(s) | 694 |
| Acc16I | TGCGCA | 1 cut(s) | 462 |
| Acc36I | ACCTGC | 1 cut(s) | 644 |
| Acc65I | GGTACC | 1 cut(s) | 659 |
| AccB1I | GGYRCC | 1 cut(s) | 659 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 148 |
| AccII | CGCG | 3 cut(s) | 130, 185, 616 |
| AciI | CCGC | 6 cut(s) | 183, 219, 556, 614, 616, 1500 |
| AclI | AACGTT | 1 cut(s) | 1179 |
| AclWI | GGATC | 3 cut(s) | 842, 1361, 1527 |
| AcsI | RAATTY | 3 cut(s) | 578, 1041, 1240 |
| AcuI | CTGAAG | 2 cut(s) | 405, 545 |
| AcyI | GRCGYC | 1 cut(s) | 691 |
| AfaI | GTAC | 3 cut(s) | 499, 661, 898 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 148, 1190, 1253 |
| AgsI | TTSAA | 6 cut(s) | 752, 891, 1002, 1239, 1392, 1447 |
| AjnI | CCWGG | 2 cut(s) | 1114, 1165 |
| Alw21I | GWGCWC | 2 cut(s) | 943, 1556 |
| Alw26I | GTCTC | 3 cut(s) | 305, 1227, 1484 |
| AlwI | GGATC | 3 cut(s) | 842, 1361, 1527 |
| AoxI | GGCC | 4 cut(s) | 23, 248, 1067, 1449 |
| ApeKI | GCWGC | 6 cut(s) | 152, 558, 755, 1085, 1379, 1520 |
| ApoI | RAATTY | 3 cut(s) | 578, 1041, 1240 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 224, 256, 1033, 1065, 1205, 1237 |
| Asp718I | GGTACC | 1 cut(s) | 659 |
| AspLEI | GCGC | 2 cut(s) | 132, 463 |
| AspS9I | GGNCC | 2 cut(s) | 178, 1193 |
| AsuC2I | CCSGG | 1 cut(s) | 1056 |
| AsuHPI | GGTGA | 3 cut(s) | 82, 724, 977 |
| AvaII | GGWCC | 2 cut(s) | 178, 1193 |
| BanI | GGYRCC | 1 cut(s) | 659 |
| BanII | GRGCYC | 2 cut(s) | 943, 1556 |
| BbsI | GAAGAC | 3 cut(s) | 393, 440, 1043 |
| Bbv12I | GWGCWC | 2 cut(s) | 943, 1556 |
| BbvI | GCAGC | 6 cut(s) | 139, 545, 767, 1097, 1366, 1507 |
| BccI | CCATC | 5 cut(s) | 337, 359, 448, 1321, 1433 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 927, 961 |
| BciT130I | CCWGG | 2 cut(s) | 1116, 1167 |
| BclI | TGATCA | 1 cut(s) | 1468 |
| BcnI | CCSGG | 1 cut(s) | 1056 |
| BcoDI | GTCTC | 3 cut(s) | 305, 1227, 1484 |
| BfaI | CTAG | 3 cut(s) | 954, 1233, 1530 |
| BfmI | CTRYAG | 2 cut(s) | 252, 651 |
| BfuAI | ACCTGC | 1 cut(s) | 644 |
| BisI | GCNGC | 7 cut(s) | 153, 559, 617, 756, 1086, 1380, 1521 |
| BlsI | GCNGC | 7 cut(s) | 154, 560, 618, 757, 1087, 1381, 1522 |
| BmcAI | AGTACT | 2 cut(s) | 499, 898 |
| Bme1390I | CCNGG | 3 cut(s) | 1056, 1116, 1167 |
| Bme18I | GGWCC | 2 cut(s) | 178, 1193 |
| BmgT120I | GGNCC | 2 cut(s) | 178, 1193 |
| BmiI | GGNNCC | 3 cut(s) | 180, 661, 1344 |
| BmrFI | CCNGG | 3 cut(s) | 1056, 1116, 1167 |
| BmsI | GCATC | 4 cut(s) | 295, 757, 823, 992 |
| BpiI | GAAGAC | 3 cut(s) | 393, 440, 1043 |
| BpmI | CTGGAG | 4 cut(s) | 40, 961, 1098, 1319 |
| Bpu10I | CCTNAGC | 1 cut(s) | 818 |
| BpuMI | CCSGG | 1 cut(s) | 1056 |
| BsaHI | GRCGYC | 1 cut(s) | 691 |
| BsaI | GGTCTC | 1 cut(s) | 1484 |
| BsaJI | CCNNGG | 4 cut(s) | 614, 741, 1076, 1184 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 260, 290 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 148, 1190, 1253 |
| Bse118I | RCCGGY | 1 cut(s) | 1099 |
| Bse1I | ACTGG | 2 cut(s) | 650, 978 |
| Bse3DI | GCAATG | 2 cut(s) | 811, 1509 |
| BseBI | CCWGG | 2 cut(s) | 1116, 1167 |
| BseDI | CCNNGG | 4 cut(s) | 614, 741, 1076, 1184 |
| BseGI | GGATG | 4 cut(s) | 310, 838, 1276, 1337 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 148, 1190, 1253 |
| BseMI | GCAATG | 2 cut(s) | 811, 1509 |
| BseMII | CTCAG | 3 cut(s) | 33, 491, 1479 |
| BseNI | ACTGG | 2 cut(s) | 650, 978 |
| BseRI | GAGGAG | 3 cut(s) | 296, 299, 363 |
| BseXI | GCAGC | 6 cut(s) | 139, 545, 767, 1097, 1366, 1507 |
| BsgI | GTGCAG | 1 cut(s) | 1125 |
| Bsh1236I | CGCG | 3 cut(s) | 130, 185, 616 |
| BshFI | GGCC | 4 cut(s) | 25, 250, 1069, 1451 |
| BshNI | GGYRCC | 1 cut(s) | 659 |
| BsiHKAI | GWGCWC | 2 cut(s) | 943, 1556 |
| BsiSI | CCGG | 2 cut(s) | 1056, 1100 |
| BslFI | GGGAC | 1 cut(s) | 1469 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 148, 1190, 1253 |
| BsmAI | GTCTC | 3 cut(s) | 305, 1227, 1484 |
| BsmFI | GGGAC | 1 cut(s) | 1469 |
| BsmI | GAATGC | 2 cut(s) | 1087, 1261 |
| BsnI | GGCC | 4 cut(s) | 25, 250, 1069, 1451 |
| Bso31I | GGTCTC | 1 cut(s) | 1484 |
| Bsp1286I | GDGCHC | 2 cut(s) | 943, 1556 |
| Bsp143I | GATC | 5 cut(s) | 186, 847, 1366, 1468, 1532 |
| Bsp19I | CCATGG | 1 cut(s) | 1076 |
| BspACI | CCGC | 6 cut(s) | 183, 219, 556, 614, 616, 1500 |
| BspANI | GGCC | 4 cut(s) | 25, 250, 1069, 1451 |
| BspCNI | CTCAG | 3 cut(s) | 34, 490, 1480 |
| BspFNI | CGCG | 3 cut(s) | 130, 185, 616 |
| BspHI | TCATGA | 2 cut(s) | 1546, 1556 |
| BspLI | GGNNCC | 3 cut(s) | 180, 661, 1344 |
| BspMAI | CTGCAG | 1 cut(s) | 655 |
| BspMI | ACCTGC | 1 cut(s) | 644 |
| BspPI | GGATC | 3 cut(s) | 842, 1361, 1527 |
| BspQI | GCTCTTC | 2 cut(s) | 200, 753 |
| BspT107I | GGYRCC | 1 cut(s) | 659 |
| BspTNI | GGTCTC | 1 cut(s) | 1484 |
| BsrDI | GCAATG | 2 cut(s) | 811, 1509 |
| BsrFI | RCCGGY | 1 cut(s) | 1099 |
| BsrI | ACTGG | 2 cut(s) | 650, 978 |
| BssAI | RCCGGY | 1 cut(s) | 1099 |
| BssECI | CCNNGG | 4 cut(s) | 614, 741, 1076, 1184 |
| BssMI | GATC | 5 cut(s) | 186, 847, 1366, 1468, 1532 |
| BssNI | GRCGYC | 1 cut(s) | 691 |
| BssT1I | CCWWGG | 2 cut(s) | 1076, 1184 |
| Bst2UI | CCWGG | 2 cut(s) | 1116, 1167 |
| Bst4CI | ACNGT | 3 cut(s) | 146, 1157, 1443 |
| Bst6I | CTCTTC | 5 cut(s) | 200, 294, 507, 753, 1039 |
| BstACI | GRCGYC | 1 cut(s) | 691 |
| BstC8I | GCNNGC | 2 cut(s) | 1163, 1509 |
| BstDEI | CTNAG | 5 cut(s) | 42, 174, 477, 818, 1488 |
| BstDSI | CCRYGG | 2 cut(s) | 614, 1076 |
| BstF5I | GGATG | 4 cut(s) | 310, 838, 1276, 1337 |
| BstFNI | CGCG | 3 cut(s) | 130, 185, 616 |
| BstHHI | GCGC | 2 cut(s) | 132, 463 |
| BstKTI | GATC | 5 cut(s) | 189, 850, 1369, 1471, 1535 |
| BstMAI | GTCTC | 3 cut(s) | 305, 1227, 1484 |
| BstMBI | GATC | 5 cut(s) | 186, 847, 1366, 1468, 1532 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 218, 325, 558, 564, 752, 1167, 1508, 1517 |
| BstNI | CCWGG | 2 cut(s) | 1116, 1167 |
| BstSCI | CCNGG | 3 cut(s) | 1054, 1114, 1165 |
| BstSFI | CTRYAG | 2 cut(s) | 252, 651 |
| BstUI | CGCG | 3 cut(s) | 130, 185, 616 |
| BstV1I | GCAGC | 6 cut(s) | 139, 545, 767, 1097, 1366, 1507 |
| BstV2I | GAAGAC | 3 cut(s) | 393, 440, 1043 |
| BstX2I | RGATCY | 1 cut(s) | 1532 |
| BstYI | RGATCY | 1 cut(s) | 1532 |
| BsuRI | GGCC | 4 cut(s) | 25, 250, 1069, 1451 |
| BtgI | CCRYGG | 2 cut(s) | 614, 1076 |
| BtsCI | GGATG | 4 cut(s) | 310, 838, 1276, 1337 |
| BtsIMutI | CAGTG | 3 cut(s) | 142, 985, 1435 |
| BveI | ACCTGC | 1 cut(s) | 644 |
| Cac8I | GCNNGC | 2 cut(s) | 1163, 1509 |
| CciI | TCATGA | 2 cut(s) | 1546, 1556 |
| CfoI | GCGC | 2 cut(s) | 132, 463 |
| Cfr10I | RCCGGY | 1 cut(s) | 1099 |
| Cfr13I | GGNCC | 2 cut(s) | 178, 1193 |
| Cfr42I | CCGCGG | 1 cut(s) | 617 |
| CseI | GACGC | 1 cut(s) | 66 |
| Csp6I | GTAC | 3 cut(s) | 498, 660, 897 |
| CviAII | CATG | 6 cut(s) | 549, 568, 664, 1077, 1547, 1557 |
| CviQI | GTAC | 3 cut(s) | 498, 660, 897 |
| DdeI | CTNAG | 5 cut(s) | 42, 174, 477, 818, 1488 |
| DpnI | GATC | 5 cut(s) | 188, 849, 1368, 1470, 1534 |
| DpnII | GATC | 5 cut(s) | 186, 847, 1366, 1468, 1532 |
| Eam1104I | CTCTTC | 5 cut(s) | 200, 294, 507, 753, 1039 |
| EarI | CTCTTC | 5 cut(s) | 200, 294, 507, 753, 1039 |
| Ecl136II | GAGCTC | 2 cut(s) | 941, 1554 |
| Eco130I | CCWWGG | 2 cut(s) | 1076, 1184 |
| Eco147I | AGGCCT | 1 cut(s) | 1451 |
| Eco24I | GRGCYC | 2 cut(s) | 943, 1556 |
| Eco31I | GGTCTC | 1 cut(s) | 1484 |
| Eco47I | GGWCC | 2 cut(s) | 178, 1193 |
| Eco53kI | GAGCTC | 2 cut(s) | 941, 1554 |
| Eco57I | CTGAAG | 2 cut(s) | 405, 545 |
| EcoICRI | GAGCTC | 2 cut(s) | 941, 1554 |
| EcoO109I | RGGNCCY | 1 cut(s) | 178 |
| EcoRII | CCWGG | 2 cut(s) | 1114, 1165 |
| EcoT14I | CCWWGG | 2 cut(s) | 1076, 1184 |
| EcoT38I | GRGCYC | 2 cut(s) | 943, 1556 |
| ErhI | CCWWGG | 2 cut(s) | 1076, 1184 |
| FaeI | CATG | 6 cut(s) | 552, 571, 667, 1080, 1550, 1560 |
| FaqI | GGGAC | 1 cut(s) | 1469 |
| FatI | CATG | 6 cut(s) | 548, 567, 663, 1076, 1546, 1556 |
| FauI | CCCGC | 4 cut(s) | 190, 226, 563, 1507 |
| FbaI | TGATCA | 1 cut(s) | 1468 |
| Fnu4HI | GCNGC | 7 cut(s) | 153, 559, 617, 756, 1086, 1380, 1521 |
| FokI | GGATG | 4 cut(s) | 317, 845, 1283, 1344 |
| FriOI | GRGCYC | 2 cut(s) | 943, 1556 |
| Fsp4HI | GCNGC | 7 cut(s) | 153, 559, 617, 756, 1086, 1380, 1521 |
| FspBI | CTAG | 3 cut(s) | 954, 1233, 1530 |
| FspI | TGCGCA | 1 cut(s) | 462 |
| GlaI | GCGC | 2 cut(s) | 131, 462 |
| GluI | GCNGC | 7 cut(s) | 153, 559, 617, 756, 1086, 1380, 1521 |
| GsuI | CTGGAG | 4 cut(s) | 40, 961, 1098, 1319 |
| HaeIII | GGCC | 4 cut(s) | 25, 250, 1069, 1451 |
| HapII | CCGG | 2 cut(s) | 1056, 1100 |
| HgaI | GACGC | 1 cut(s) | 66 |
| HhaI | GCGC | 2 cut(s) | 132, 463 |
| Hin1I | GRCGYC | 1 cut(s) | 691 |
| Hin1II | CATG | 6 cut(s) | 552, 571, 667, 1080, 1550, 1560 |
| Hin6I | GCGC | 2 cut(s) | 130, 461 |
| HinP1I | GCGC | 2 cut(s) | 130, 461 |
| HincII | GTYRAC | 1 cut(s) | 6 |
| HindII | GTYRAC | 1 cut(s) | 6 |
| HindIII | AAGCTT | 1 cut(s) | 820 |
| HinfI | GANTC | 8 cut(s) | 46, 85, 275, 323, 416, 813, 1410, 1421 |
| HpaII | CCGG | 2 cut(s) | 1056, 1100 |
| HphI | GGTGA | 3 cut(s) | 82, 724, 977 |
| Hpy166II | GTNNAC | 3 cut(s) | 6, 427, 1196 |
| Hpy188I | TCNGA | 7 cut(s) | 280, 480, 511, 762, 827, 1347, 1409 |
| Hpy8I | GTNNAC | 3 cut(s) | 6, 427, 1196 |
| Hpy99I | CGWCG | 3 cut(s) | 60, 233, 696 |
| HpyAV | CCTTC | 2 cut(s) | 1215, 1462 |
| HpyCH4III | ACNGT | 3 cut(s) | 146, 1157, 1443 |
| HpyCH4IV | ACGT | 3 cut(s) | 691, 1179, 1278 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 218, 325, 558, 564, 752, 1167, 1508, 1517 |
| HpyF3I | CTNAG | 5 cut(s) | 42, 174, 477, 818, 1488 |
| HpySE526I | ACGT | 3 cut(s) | 691, 1179, 1278 |
| Hsp92I | GRCGYC | 1 cut(s) | 691 |
| Hsp92II | CATG | 6 cut(s) | 552, 571, 667, 1080, 1550, 1560 |
| HspAI | GCGC | 2 cut(s) | 130, 461 |
| KpnI | GGTACC | 1 cut(s) | 663 |
| Ksp22I | TGATCA | 1 cut(s) | 1468 |
| KspI | CCGCGG | 1 cut(s) | 617 |
| Kzo9I | GATC | 5 cut(s) | 186, 847, 1366, 1468, 1532 |
| LguI | GCTCTTC | 2 cut(s) | 200, 753 |
| LmnI | GCTCC | 5 cut(s) | 683, 775, 779, 946, 980 |
| Lsp1109I | GCAGC | 6 cut(s) | 139, 545, 767, 1097, 1366, 1507 |
| LweI | GCATC | 4 cut(s) | 295, 757, 823, 992 |
| MaeI | CTAG | 3 cut(s) | 954, 1233, 1530 |
| MaeII | ACGT | 3 cut(s) | 691, 1179, 1278 |
| MaeIII | GTNAC | 1 cut(s) | 584 |
| MalI | GATC | 5 cut(s) | 188, 849, 1368, 1470, 1534 |
| MboI | GATC | 5 cut(s) | 186, 847, 1366, 1468, 1532 |
| MflI | RGATCY | 1 cut(s) | 1532 |
| MhlI | GDGCHC | 2 cut(s) | 943, 1556 |
| MluCI | AATT | 5 cut(s) | 578, 595, 1041, 1240, 1479 |
| MlyI | GAGTC | 3 cut(s) | 79, 284, 822 |
| MmeI | TCCRAC | 3 cut(s) | 145, 1271, 1480 |
| MspA1I | CMGCKG | 3 cut(s) | 558, 616, 1520 |
| MspI | CCGG | 2 cut(s) | 1056, 1100 |
| MspR9I | CCNGG | 3 cut(s) | 1056, 1116, 1167 |
| Mva1269I | GAATGC | 2 cut(s) | 1087, 1261 |
| MvaI | CCWGG | 2 cut(s) | 1116, 1167 |
| MvnI | CGCG | 3 cut(s) | 130, 185, 616 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 218, 325, 558, 564, 752, 1167, 1508, 1517 |
| NciI | CCSGG | 1 cut(s) | 1056 |
| NcoI | CCATGG | 1 cut(s) | 1076 |
| NdeII | GATC | 5 cut(s) | 186, 847, 1366, 1468, 1532 |
| NlaIII | CATG | 6 cut(s) | 552, 571, 667, 1080, 1550, 1560 |
| NlaIV | GGNNCC | 3 cut(s) | 180, 661, 1344 |
| NmeAIII | GCCGAG | 2 cut(s) | 181, 226 |
| NsbI | TGCGCA | 1 cut(s) | 462 |
| PagI | TCATGA | 2 cut(s) | 1546, 1556 |
| PaqCI | CACCTGC | 1 cut(s) | 644 |
| PceI | AGGCCT | 1 cut(s) | 1451 |
| PciSI | GCTCTTC | 2 cut(s) | 200, 753 |
| PctI | GAATGC | 2 cut(s) | 1087, 1261 |
| PfeI | GAWTC | 5 cut(s) | 46, 323, 416, 1410, 1421 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 148 |
| PfoI | TCCNGGA | 1 cut(s) | 1114 |
| PkrI | GCNGC | 7 cut(s) | 154, 560, 618, 757, 1087, 1381, 1522 |
| PleI | GAGTC | 3 cut(s) | 79, 283, 821 |
| PpsI | GAGTC | 3 cut(s) | 79, 283, 821 |
| PpuMI | RGGWCCY | 1 cut(s) | 178 |
| Psp124BI | GAGCTC | 2 cut(s) | 943, 1556 |
| Psp1406I | AACGTT | 1 cut(s) | 1179 |
| Psp5II | RGGWCCY | 1 cut(s) | 178 |
| Psp6I | CCWGG | 2 cut(s) | 1114, 1165 |
| PspGI | CCWGG | 2 cut(s) | 1114, 1165 |
| PspN4I | GGNNCC | 3 cut(s) | 180, 661, 1344 |
| PspPI | GGNCC | 2 cut(s) | 178, 1193 |
| PspPPI | RGGWCCY | 1 cut(s) | 178 |
| PstI | CTGCAG | 1 cut(s) | 655 |
| PsuI | RGATCY | 1 cut(s) | 1532 |
| PvuII | CAGCTG | 1 cut(s) | 1520 |
| RsaI | GTAC | 3 cut(s) | 499, 661, 898 |
| RsaNI | GTAC | 3 cut(s) | 498, 660, 897 |
| SacI | GAGCTC | 2 cut(s) | 943, 1556 |
| SacII | CCGCGG | 1 cut(s) | 617 |
| SapI | GCTCTTC | 2 cut(s) | 200, 753 |
| SatI | GCNGC | 7 cut(s) | 153, 559, 617, 756, 1086, 1380, 1521 |
| Sau3AI | GATC | 5 cut(s) | 186, 847, 1366, 1468, 1532 |
| Sau96I | GGNCC | 2 cut(s) | 178, 1193 |
| ScaI | AGTACT | 2 cut(s) | 499, 898 |
| SchI | GAGTC | 3 cut(s) | 79, 284, 822 |
| ScrFI | CCNGG | 3 cut(s) | 1056, 1116, 1167 |
| SduI | GDGCHC | 2 cut(s) | 943, 1556 |
| SfaNI | GCATC | 4 cut(s) | 295, 757, 823, 992 |
| SfcI | CTRYAG | 2 cut(s) | 252, 651 |
| Sfr303I | CCGCGG | 1 cut(s) | 617 |
| SgrBI | CCGCGG | 1 cut(s) | 617 |
| SinI | GGWCC | 2 cut(s) | 178, 1193 |
| Sse9I | AATT | 5 cut(s) | 578, 595, 1041, 1240, 1479 |
| SseBI | AGGCCT | 1 cut(s) | 1451 |
| SsiI | CCGC | 6 cut(s) | 183, 219, 556, 614, 616, 1500 |
| SspI | AATATT | 1 cut(s) | 408 |
| SspMI | CTAG | 3 cut(s) | 954, 1233, 1530 |
| SstI | GAGCTC | 2 cut(s) | 943, 1556 |
| StuI | AGGCCT | 1 cut(s) | 1451 |
| StyD4I | CCNGG | 3 cut(s) | 1054, 1114, 1165 |
| StyI | CCWWGG | 2 cut(s) | 1076, 1184 |
| TaaI | ACNGT | 3 cut(s) | 146, 1157, 1443 |
| TaiI | ACGT | 3 cut(s) | 694, 1182, 1281 |
| TaqI | TCGA | 6 cut(s) | 228, 341, 467, 901, 937, 1265 |
| TasI | AATT | 5 cut(s) | 578, 595, 1041, 1240, 1479 |
| TatI | WGTACW | 2 cut(s) | 497, 896 |
| TauI | GCSGC | 1 cut(s) | 619 |
| TfiI | GAWTC | 5 cut(s) | 46, 323, 416, 1410, 1421 |
| TscAI | CASTG | 3 cut(s) | 149, 985, 1435 |
| TseI | GCWGC | 6 cut(s) | 152, 558, 755, 1085, 1379, 1520 |
| TspDTI | ATGAA | 2 cut(s) | 465, 1535 |
| TspGWI | ACGGA | 1 cut(s) | 1372 |
| TspRI | CASTG | 3 cut(s) | 149, 985, 1435 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 148 |
| VpaK11BI | GGWCC | 2 cut(s) | 178, 1193 |
| XapI | RAATTY | 3 cut(s) | 578, 1041, 1240 |
| XbaI | TCTAGA | 1 cut(s) | 1529 |
| XspI | CTAG | 3 cut(s) | 954, 1233, 1530 |
| ZraI | GACGTC | 1 cut(s) | 692 |
| ZrmI | AGTACT | 2 cut(s) | 499, 898 |