Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0009099

Physical Location & Seq

Genomic Coordinates Reverse (-)

16711551 .. 16718505

Gene Structure 6955 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g25240.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1890 bp

ATGGGGTGGAGAAATGCGTTCGATAACTCGAAGCCACTGTTCGTGGCTGTATACGCCACCGTCATAGTTGGGATTATCTTCTCGTCTTTATATGTCATTTCCGCCATTTACTCCGGCAAGGCTGCCACATTCTCCGCCACCTCCTTTCAGAACAATGTTGGTTCTTCCCCTTCAGAGCAAGCACTCAATGTCTCACAATCGGCAGTTGTTCAAGGGGTGCCCTCACCTAATCTAGAGAGTCGAAATGTGTCGACCAAGCCTATTTGGGAAGCTCCCAACACAAAGAAAATGCCAGAGTTGGAGACGTTTAGATTGACCAAAGAACTGGTTCAGCAAAGAGTGAAGGATAATGTAGTTATTGTGACCTTTGGTAACTATGCATTTATGGATTTTATCCTGACATGGGTGAAACACTTGACTGATCTGGGGATTTCTAACCTTCTCGTCGGTGCAATGGACACCAAACTGTTGGAGGCTTTGTATTGGAAAGGTGTTCCAGTATTTGATATGGGCAGCCATATGAGCACAATAGATGTTGGATGGGGATCGCCGACATTCCACAAGATGGGAAGAGAAAAAGTTATACTGATAGACTCAATCCTTCTGTATGGTTTTGAGCTCTTGATGTGTGATACAGACATGGTTTGGTTGAAGAACCCTCTTCCATTTCTTGCCCGCTATCCTGAAGCAGATGTCCTAACGTCCAGTGATCAAGTTGTACCAACAGTAGCTGATGACAGGCTGGACATCTGGCAACAAGTTGGTGCTGCCTATAATATTGGAATTTTCCACTGGCGGCCAACAGACCCTGCTAAAAAATTGGCTAAAGAATGGAAAGAAATGCTTCTAGCTGATGACAAGATATGGGACCAGAATGGGTTTAATGATCTTGTACGGAAGCAGTTAGGACCAGCTGTAGATGGGGAAAGTGAACTCGTATATGCTTATGATGGAAGTCTCAAGCTAGGAATTTTGCCTGCGAGTATATTTTGTAGTGGGCATACATATTTTGTCCAGGCCATGTACCAGCAATTGAGGTTGGAGCCATATGCAGTGCATACAACCTTCCAGTATGCGGGTACTGATGGAAAGCGCCACCGACTACGTGAAGGAATGGTTTTCTTTGACCCGCCTGAATACTATGATGCACCAGGGGGGTTTTTGACTTTTAAGCCATCTATTCCTAAGAACTTGTTACTCGAGGGGCCGCATACTGTTGAATCACATTTTACTCTTGTTAATTACCAAATAAAACAAATTAGGATGGCCCTTGCTATTGCTTCCGTGTTAAATCGAACTCTGGTCATGCCTCCACTATGGTGCAGGTTGGACAGGCTGTGGTTTCCCCACCCTGGAGTTCTTGAGGGATCTTTGACTAGACAGCCTTTTCTTTGCCCTCTTGACCATGTATTTGAGGTAAATATCATGCTCAAGGAGCTGCCAGTTGAAGAATTCGGGCCCCAGATCAATATTAGAGAGTACTCATTCTTTGACAATCCATTGATGCCAAAACAGGTGAAAGATTCATGGCTTGAAGTCCAGCTTTGTCAGGAAGGAATCCGAGACTGTCTGGCATCAAATAATACAAGCCCATCAGGAGTTCTCAGATTTCCAAAGAGAAGCAGTGAAGAGACGTTTAAGACAGTATTTTCCTCATTCAAAGATGTCAAAGTTATCAAGTTTTCATCTATGCAAGATGCCTTCCTTGGTTTTGCTGACAAGATAAGGGAAGAGAGATTCAGGAATCGTGTGAAGCGATATGTTGGTATATGGTGTTGTGTAGCTGAACAAACTCCTGGCCACATATATTATGACATGTACTGGGATGAGAAACCAGGTTGGAAACCTCTCCCACCTCAAACCCCGCAAGATGACCACCCGCCACCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005975 GO:0005976 GO:0006464 GO:0006486 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009653 GO:0009664 GO:0009832 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010383 GO:0010393 GO:0012505 GO:0016043 GO:0016051 GO:0016740 GO:0016757 GO:0016763 GO:0017144 GO:0019538 GO:0021700 GO:0022622 GO:0030154 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0033692 GO:0034637 GO:0034645 GO:0036211 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044036 GO:0044038 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044267 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045229 GO:0045488 GO:0045489 GO:0048364 GO:0048468 GO:0048469 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0052325 GO:0052546 GO:0052636 GO:0070085 GO:0070589 GO:0070592 GO:0071554 GO:0071555 GO:0071669 GO:0071695 GO:0071704 GO:0071840 GO:0080147 GO:0090558 GO:0090627 GO:0097708 GO:0098791 GO:0099402 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko00514 map00514

Pfam Domains

Protein Families

Nucleotid_trans

Protein Analysis

630

Amino Acids

71.56

Weight (kDa)

6.05

Isoelectric Point (pI)

44.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Nucleotid_trans	PF03407	144 - 368	2e-52	Nucleotide-diphospho-sugar transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009099)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35610
fragaria_vesca	FvH4_5g25240 FvH4_5g25240 FvH4_5g25240 FvH4_5g25240
malus_domestica	MD06G1008500.v1.1
prunus_persica	Prupe.5G011600_v2.0.a1 Prupe.5G011600_v2.0.a1 Prupe.5G011600_v2.0.a1 Prupe.5G011600_v2.0.a1 Prupe.5G011600_v2.0.a1
pyrus_communis	pycom16g25860
rosa_chinensis	RchiOBHm_Chr7g0215361
rosa_laevigata	RLG00000002667
rosa_multiflora	Rmu_sc0000355.1_g000013
rosa_roxburghii	Rroxscaffold_3G00244240
rosa_rugosa	Rorug07G0152700
rosa_samantha	Rh7AG289300 Rh7BG281300 Rh7CG309100 Rh7DG292900
rosa_wichuraiana	Rw7G024730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1314
AccB1I	GGYRCC	1 cut(s)	217
AccB7I	CCANNNNNTGG	1 cut(s)	565
AccI	GTMKAC	2 cut(s)	51, 251
AciI	CCGC	9 cut(s)	102, 135, 676, 796, 1076, 1130, 1208, 1865, 1880
AclWI	GGATC	2 cut(s)	553, 1375
AcoI	YGGCCR	2 cut(s)	797, 1798
AcsI	RAATTY	3 cut(s)	783, 969, 1451
AcuI	CTGAAG	2 cut(s)	156, 705
AfaI	GTAC	6 cut(s)	720, 894, 1025, 1081, 1481, 1820
AfiI	CCNNNNNNNGG	4 cut(s)	403, 565, 1075, 1352
AflIII	ACRYGT	1 cut(s)	1815
AgsI	TTSAA	6 cut(s)	212, 652, 1220, 1448, 1535, 1660
AjnI	CCWGG	5 cut(s)	1014, 1150, 1351, 1795, 1834
AleI	CACNNNNGTG	1 cut(s)	1318
AluBI	AGCT	9 cut(s)	272, 619, 731, 851, 914, 964, 1438, 1543, 1784
AluI	AGCT	9 cut(s)	272, 619, 731, 851, 914, 964, 1438, 1543, 1784
Alw21I	GWGCWC	2 cut(s)	527, 621
Alw26I	GTCTC	5 cut(s)	196, 296, 962, 1557, 1625
AlwI	GGATC	2 cut(s)	553, 1375
AlwNI	CAGNNNCTG	2 cut(s)	731, 809
Ama87I	CYCGRG	1 cut(s)	1199
AoxI	GGCC	6 cut(s)	797, 1017, 1205, 1266, 1457, 1798
ApaI	GGGCCC	1 cut(s)	1461
ApeKI	GCWGC	4 cut(s)	122, 513, 767, 1438
ApoI	RAATTY	3 cut(s)	783, 969, 1451
ArsI	GACNNNNNNTTYG	2 cut(s)	1394, 1426
Asp700I	GAANNNNTTC	2 cut(s)	327, 843
AspLEI	GCGC	1 cut(s)	1095
AspS9I	GGNCC	6 cut(s)	868, 908, 1205, 1267, 1457, 1458
AsuHPI	GGTGA	3 cut(s)	216, 418, 1528
AvaI	CYCGRG	1 cut(s)	1199
AvaII	GGWCC	2 cut(s)	868, 908
BaeGI	GKGCMC	2 cut(s)	222, 1461
BalI	TGGCCA	1 cut(s)	1800
BanI	GGYRCC	1 cut(s)	217
BanII	GRGCYC	2 cut(s)	621, 1461
Bbv12I	GWGCWC	2 cut(s)	527, 621
BbvI	GCAGC	4 cut(s)	109, 525, 754, 1425
BccI	CCATC	8 cut(s)	534, 559, 914, 944, 1079, 1183, 1258, 1600
BciT130I	CCWGG	5 cut(s)	1016, 1152, 1353, 1797, 1836
BclI	TGATCA	1 cut(s)	709
BcoDI	GTCTC	5 cut(s)	196, 296, 962, 1557, 1625
BfaI	CTAG	4 cut(s)	233, 848, 965, 1377
BfmI	CTRYAG	1 cut(s)	915
BfoI	RGCGCY	1 cut(s)	1096
BfuAI	ACCTGC	1 cut(s)	1314
BisI	GCNGC	6 cut(s)	123, 514, 768, 797, 1208, 1439
BlsI	GCNGC	6 cut(s)	124, 515, 769, 798, 1209, 1440
BmcAI	AGTACT	1 cut(s)	1481
Bme1390I	CCNGG	5 cut(s)	1016, 1152, 1353, 1797, 1836
Bme18I	GGWCC	2 cut(s)	868, 908
BmeT110I	CYCGRG	1 cut(s)	1199
BmgT120I	GGNCC	6 cut(s)	868, 908, 1205, 1267, 1457, 1458
BmiI	GGNNCC	6 cut(s)	219, 869, 1044, 1206, 1459, 1460
BmrFI	CCNGG	5 cut(s)	1016, 1152, 1353, 1797, 1836
BmrI	ACTGGG	1 cut(s)	1831
BmsI	GCATC	4 cut(s)	1135, 1494, 1583, 1687
BmuI	ACTGGG	1 cut(s)	1831
BpmI	CTGGAG	1 cut(s)	1374
BpuEI	CTTGAG	3 cut(s)	944, 1382, 1415
BsaAI	YACGTR	1 cut(s)	1106
BsaBI	GATNNNNATC	1 cut(s)	544
BsaJI	CCNNGG	3 cut(s)	1151, 1351, 1705
BsaXI	ACNNNNNCTCC	2 cut(s)	464, 494
Bsc4I	CCNNNNNNNGG	4 cut(s)	403, 565, 1075, 1352
Bse1I	ACTGG	7 cut(s)	330, 497, 705, 797, 1069, 1442, 1826
Bse3DI	GCAATG	1 cut(s)	459
Bse8I	GATNNNNATC	1 cut(s)	544
BseBI	CCWGG	5 cut(s)	1016, 1152, 1353, 1797, 1836
BseDI	CCNNGG	3 cut(s)	1151, 1351, 1705
BseGI	GGATG	3 cut(s)	545, 1269, 1831
BseJI	GATNNNNATC	1 cut(s)	544
BseLI	CCNNNNNNNGG	4 cut(s)	403, 565, 1075, 1352
BseMI	GCAATG	1 cut(s)	459
BseMII	CTCAG	1 cut(s)	1618
BseNI	ACTGG	7 cut(s)	330, 497, 705, 797, 1069, 1442, 1826
BseSI	GKGCMC	2 cut(s)	222, 1461
BseXI	GCAGC	4 cut(s)	109, 525, 754, 1425
BsgI	GTGCAG	1 cut(s)	1342
BshFI	GGCC	6 cut(s)	799, 1019, 1207, 1268, 1459, 1800
BshNI	GGYRCC	1 cut(s)	217
BsiHKAI	GWGCWC	2 cut(s)	527, 621
BsiHKCI	CYCGRG	1 cut(s)	1199
BsiSI	CCGG	1 cut(s)	114
BslFI	GGGAC	1 cut(s)	881
BslI	CCNNNNNNNGG	4 cut(s)	403, 565, 1075, 1352
BsmAI	GTCTC	5 cut(s)	196, 296, 962, 1557, 1625
BsmBI	CGTCTC	2 cut(s)	296, 1625
BsmFI	GGGAC	1 cut(s)	881
BsnI	GGCC	6 cut(s)	799, 1019, 1207, 1268, 1459, 1800
BsoBI	CYCGRG	1 cut(s)	1199
Bsp120I	GGGCCC	1 cut(s)	1457
Bsp1286I	GDGCHC	4 cut(s)	222, 527, 621, 1461
Bsp143I	GATC	6 cut(s)	421, 545, 709, 886, 1367, 1464
BspACI	CCGC	9 cut(s)	102, 135, 676, 796, 1076, 1130, 1208, 1865, 1880
BspANI	GGCC	6 cut(s)	799, 1019, 1207, 1268, 1459, 1800
BspCNI	CTCAG	1 cut(s)	1617
BspLI	GGNNCC	6 cut(s)	219, 869, 1044, 1206, 1459, 1460
BspMI	ACCTGC	1 cut(s)	1314
BspPI	GGATC	2 cut(s)	553, 1375
BspT107I	GGYRCC	1 cut(s)	217
BsrDI	GCAATG	1 cut(s)	459
BsrI	ACTGG	7 cut(s)	330, 497, 705, 797, 1069, 1442, 1826
BssECI	CCNNGG	3 cut(s)	1151, 1351, 1705
BssMI	GATC	6 cut(s)	421, 545, 709, 886, 1367, 1464
BssNAI	GTATAC	1 cut(s)	52
BssT1I	CCWWGG	1 cut(s)	1705
Bst1107I	GTATAC	1 cut(s)	52
Bst2UI	CCWGG	5 cut(s)	1016, 1152, 1353, 1797, 1836
Bst4CI	ACNGT	7 cut(s)	39, 61, 468, 727, 1216, 1568, 1645
Bst6I	CTCTTC	4 cut(s)	565, 666, 1623, 1725
BstBAI	YACGTR	1 cut(s)	1106
BstC8I	GCNNGC	3 cut(s)	180, 676, 978
BstDEI	CTNAG	2 cut(s)	1185, 1604
BstF5I	GGATG	3 cut(s)	545, 1269, 1831
BstH2I	RGCGCY	1 cut(s)	1096
BstHHI	GCGC	1 cut(s)	1095
BstKTI	GATC	6 cut(s)	424, 548, 712, 889, 1370, 1467
BstMAI	GTCTC	5 cut(s)	196, 296, 962, 1557, 1625
BstMBI	GATC	6 cut(s)	421, 545, 709, 886, 1367, 1464
BstMWI	GCNNNNNNNGC	3 cut(s)	53, 522, 1435
BstNI	CCWGG	5 cut(s)	1016, 1152, 1353, 1797, 1836
BstNSI	RCATGY	1 cut(s)	1819
BstSCI	CCNGG	5 cut(s)	1014, 1150, 1351, 1795, 1834
BstSFI	CTRYAG	1 cut(s)	915
BstSLI	GKGCMC	2 cut(s)	222, 1461
BstV1I	GCAGC	4 cut(s)	109, 525, 754, 1425
BstX2I	RGATCY	1 cut(s)	1367
BstXI	CCANNNNNNTGG	2 cut(s)	325, 469
BstYI	RGATCY	1 cut(s)	1367
BstZ17I	GTATAC	1 cut(s)	52
BsuRI	GGCC	6 cut(s)	799, 1019, 1207, 1268, 1459, 1800
BtsCI	GGATG	3 cut(s)	545, 1269, 1831
BtsI	GCAGTG	2 cut(s)	1059, 1630
BtsIMutI	CAGTG	5 cut(s)	35, 712, 790, 1059, 1630
BveI	ACCTGC	1 cut(s)	1314
Cac8I	GCNNGC	3 cut(s)	180, 676, 978
CaiI	CAGNNNCTG	2 cut(s)	731, 809
CfoI	GCGC	1 cut(s)	1095
Cfr13I	GGNCC	6 cut(s)	868, 908, 1205, 1267, 1457, 1458
CsiI	ACCWGGT	1 cut(s)	1834
Csp6I	GTAC	6 cut(s)	719, 893, 1024, 1080, 1480, 1819
CviAII	CATG	9 cut(s)	402, 640, 1021, 1306, 1406, 1426, 1527, 1816, 1887
CviQI	GTAC	6 cut(s)	719, 893, 1024, 1080, 1480, 1819
DdeI	CTNAG	2 cut(s)	1185, 1604
DpnI	GATC	6 cut(s)	423, 547, 711, 888, 1369, 1466
DpnII	GATC	6 cut(s)	421, 545, 709, 886, 1367, 1464
EaeI	YGGCCR	2 cut(s)	797, 1798
Eam1104I	CTCTTC	4 cut(s)	565, 666, 1623, 1725
EarI	CTCTTC	4 cut(s)	565, 666, 1623, 1725
EciI	GGCGGA	2 cut(s)	91, 124
Ecl136II	GAGCTC	1 cut(s)	619
Eco130I	CCWWGG	1 cut(s)	1705
Eco24I	GRGCYC	2 cut(s)	621, 1461
Eco47I	GGWCC	2 cut(s)	868, 908
Eco53kI	GAGCTC	1 cut(s)	619
Eco57I	CTGAAG	2 cut(s)	156, 705
Eco88I	CYCGRG	1 cut(s)	1199
EcoICRI	GAGCTC	1 cut(s)	619
EcoO109I	RGGNCCY	1 cut(s)	1458
EcoRI	GAATTC	1 cut(s)	1451
EcoRII	CCWGG	5 cut(s)	1014, 1150, 1351, 1795, 1834
EcoT14I	CCWWGG	1 cut(s)	1705
EcoT22I	ATGCAT	1 cut(s)	382
EcoT38I	GRGCYC	2 cut(s)	621, 1461
ErhI	CCWWGG	1 cut(s)	1705
Esp3I	CGTCTC	2 cut(s)	296, 1625
FaeI	CATG	9 cut(s)	405, 643, 1024, 1309, 1409, 1429, 1530, 1819, 1890
FalI	AAGNNNNNCTT	4 cut(s)	828, 860, 1527, 1559
FaqI	GGGAC	1 cut(s)	881
FatI	CATG	9 cut(s)	401, 639, 1020, 1305, 1405, 1425, 1526, 1815, 1886
FauI	CCCGC	5 cut(s)	683, 1069, 1137, 1872, 1887
FauNDI	CATATG	2 cut(s)	519, 1048
FbaI	TGATCA	1 cut(s)	709
FblI	GTMKAC	2 cut(s)	51, 251
Fnu4HI	GCNGC	6 cut(s)	123, 514, 768, 797, 1208, 1439
FokI	GGATG	3 cut(s)	552, 1276, 1838
FriOI	GRGCYC	2 cut(s)	621, 1461
Fsp4HI	GCNGC	6 cut(s)	123, 514, 768, 797, 1208, 1439
FspBI	CTAG	4 cut(s)	233, 848, 965, 1377
GlaI	GCGC	1 cut(s)	1094
GluI	GCNGC	6 cut(s)	123, 514, 768, 797, 1208, 1439
GsuI	CTGGAG	1 cut(s)	1374
HaeII	RGCGCY	1 cut(s)	1096
HaeIII	GGCC	6 cut(s)	799, 1019, 1207, 1268, 1459, 1800
HapII	CCGG	1 cut(s)	114
HhaI	GCGC	1 cut(s)	1095
Hin1II	CATG	9 cut(s)	405, 643, 1024, 1309, 1409, 1429, 1530, 1819, 1890
Hin6I	GCGC	1 cut(s)	1093
HinP1I	GCGC	1 cut(s)	1093
HincII	GTYRAC	1 cut(s)	252
HindII	GTYRAC	1 cut(s)	252
HinfI	GANTC	7 cut(s)	238, 593, 1220, 1523, 1557, 1737, 1744
HpaII	CCGG	1 cut(s)	114
HphI	GGTGA	3 cut(s)	216, 418, 1528
Hpy166II	GTNNAC	3 cut(s)	52, 252, 932
Hpy188I	TCNGA	4 cut(s)	150, 175, 1562, 1607
Hpy188III	TCNNGA	9 cut(s)	233, 397, 622, 683, 1361, 1400, 1550, 1596, 1741
Hpy8I	GTNNAC	3 cut(s)	52, 252, 932
Hpy99I	CGWCG	1 cut(s)	449
HpyAV	CCTTC	8 cut(s)	180, 337, 449, 611, 1075, 1103, 1547, 1711
HpyCH4III	ACNGT	7 cut(s)	39, 61, 468, 727, 1216, 1568, 1645
HpyCH4IV	ACGT	4 cut(s)	305, 701, 1105, 1634
HpyCH4V	TGCA	7 cut(s)	380, 452, 1052, 1057, 1148, 1323, 1693
HpyF10VI	GCNNNNNNNGC	3 cut(s)	53, 522, 1435
HpyF3I	CTNAG	2 cut(s)	1185, 1604
HpySE526I	ACGT	4 cut(s)	305, 701, 1105, 1634
Hsp92II	CATG	9 cut(s)	405, 643, 1024, 1309, 1409, 1429, 1530, 1819, 1890
HspAI	GCGC	1 cut(s)	1093
Ksp22I	TGATCA	1 cut(s)	709
Kzo9I	GATC	6 cut(s)	421, 545, 709, 886, 1367, 1464
LmnI	GCTCC	3 cut(s)	277, 1042, 1435
Lsp1109I	GCAGC	4 cut(s)	109, 525, 754, 1425
LweI	GCATC	4 cut(s)	1135, 1494, 1583, 1687
MabI	ACCWGGT	1 cut(s)	1834
MaeI	CTAG	4 cut(s)	233, 848, 965, 1377
MaeII	ACGT	4 cut(s)	305, 701, 1105, 1634
MaeIII	GTNAC	3 cut(s)	361, 371, 1194
MalI	GATC	6 cut(s)	423, 547, 711, 888, 1369, 1466
MboI	GATC	6 cut(s)	421, 545, 709, 886, 1367, 1464
MboII	GAAGA	8 cut(s)	70, 156, 582, 653, 664, 1460, 1640, 1742
MfeI	CAATTG	1 cut(s)	1031
MflI	RGATCY	1 cut(s)	1367
MhlI	GDGCHC	4 cut(s)	222, 527, 621, 1461
MlsI	TGGCCA	1 cut(s)	1800
MluCI	AATT	7 cut(s)	783, 818, 969, 1031, 1240, 1257, 1451
MluNI	TGGCCA	1 cut(s)	1800
MlyI	GAGTC	2 cut(s)	247, 587
MmeI	TCCRAC	6 cut(s)	279, 450, 517, 1020, 1308, 1820
Mox20I	TGGCCA	1 cut(s)	1800
Mph1103I	ATGCAT	1 cut(s)	382
MroXI	GAANNNNTTC	2 cut(s)	327, 843
MscI	TGGCCA	1 cut(s)	1800
MseI	TTAA	5 cut(s)	882, 1170, 1239, 1289, 1638
MslI	CAYNNNNRTG	1 cut(s)	1318
Msp20I	TGGCCA	1 cut(s)	1800
MspA1I	CMGCKG	1 cut(s)	914
MspI	CCGG	1 cut(s)	114
MspR9I	CCNGG	5 cut(s)	1016, 1152, 1353, 1797, 1836
MunI	CAATTG	1 cut(s)	1031
MvaI	CCWGG	5 cut(s)	1016, 1152, 1353, 1797, 1836
MwoI	GCNNNNNNNGC	3 cut(s)	53, 522, 1435
NdeI	CATATG	2 cut(s)	519, 1048
NdeII	GATC	6 cut(s)	421, 545, 709, 886, 1367, 1464
NlaIII	CATG	9 cut(s)	405, 643, 1024, 1309, 1409, 1429, 1530, 1819, 1890
NlaIV	GGNNCC	6 cut(s)	219, 869, 1044, 1206, 1459, 1460
NmuCI	GTSAC	1 cut(s)	361
NsiI	ATGCAT	1 cut(s)	382
NspI	RCATGY	1 cut(s)	1819
OliI	CACNNNNGTG	1 cut(s)	1318
PaeR7I	CTCGAG	1 cut(s)	1199
PciI	ACATGT	1 cut(s)	1815
PcsI	WCGNNNNNNNCGW	1 cut(s)	1753
PdmI	GAANNNNTTC	2 cut(s)	327, 843
PfeI	GAWTC	5 cut(s)	1220, 1523, 1557, 1737, 1744
PflMI	CCANNNNNTGG	1 cut(s)	565
PkrI	GCNGC	6 cut(s)	124, 515, 769, 798, 1209, 1440
PleI	GAGTC	2 cut(s)	246, 587
PpsI	GAGTC	2 cut(s)	246, 587
Ppu21I	YACGTR	1 cut(s)	1106
PscI	ACATGT	1 cut(s)	1815
Psp124BI	GAGCTC	1 cut(s)	621
Psp6I	CCWGG	5 cut(s)	1014, 1150, 1351, 1795, 1834
PspGI	CCWGG	5 cut(s)	1014, 1150, 1351, 1795, 1834
PspN4I	GGNNCC	6 cut(s)	219, 869, 1044, 1206, 1459, 1460
PspOMI	GGGCCC	1 cut(s)	1457
PspPI	GGNCC	6 cut(s)	868, 908, 1205, 1267, 1457, 1458
PspXI	VCTCGAGB	1 cut(s)	1199
PstNI	CAGNNNCTG	2 cut(s)	731, 809
PsuI	RGATCY	1 cut(s)	1367
PvuII	CAGCTG	1 cut(s)	914
RsaI	GTAC	6 cut(s)	720, 894, 1025, 1081, 1481, 1820
RsaNI	GTAC	6 cut(s)	719, 893, 1024, 1080, 1480, 1819
RseI	CAYNNNNRTG	1 cut(s)	1318
SacI	GAGCTC	1 cut(s)	621
SalI	GTCGAC	1 cut(s)	250
SaqAI	TTAA	5 cut(s)	882, 1170, 1239, 1289, 1638
SatI	GCNGC	6 cut(s)	123, 514, 768, 797, 1208, 1439
Sau3AI	GATC	6 cut(s)	421, 545, 709, 886, 1367, 1464
Sau96I	GGNCC	6 cut(s)	868, 908, 1205, 1267, 1457, 1458
ScaI	AGTACT	1 cut(s)	1481
SchI	GAGTC	2 cut(s)	247, 587
ScrFI	CCNGG	5 cut(s)	1016, 1152, 1353, 1797, 1836
SduI	GDGCHC	4 cut(s)	222, 527, 621, 1461
SexAI	ACCWGGT	1 cut(s)	1834
SfaNI	GCATC	4 cut(s)	1135, 1494, 1583, 1687
SfcI	CTRYAG	1 cut(s)	915
Sfr274I	CTCGAG	1 cut(s)	1199
SinI	GGWCC	2 cut(s)	868, 908
SlaI	CTCGAG	1 cut(s)	1199
SmiMI	CAYNNNNRTG	1 cut(s)	1318
SmlI	CTYRAG	4 cut(s)	959, 1199, 1361, 1430
SmoI	CTYRAG	4 cut(s)	959, 1199, 1361, 1430
Sse9I	AATT	7 cut(s)	783, 818, 969, 1031, 1240, 1257, 1451
SsiI	CCGC	9 cut(s)	102, 135, 676, 796, 1076, 1130, 1208, 1865, 1880
SspI	AATATT	2 cut(s)	778, 1471
SspMI	CTAG	4 cut(s)	233, 848, 965, 1377
SstI	GAGCTC	1 cut(s)	621
StyD4I	CCNGG	5 cut(s)	1014, 1150, 1351, 1795, 1834
StyI	CCWWGG	1 cut(s)	1705
TaaI	ACNGT	7 cut(s)	39, 61, 468, 727, 1216, 1568, 1645
TaiI	ACGT	4 cut(s)	308, 704, 1108, 1637
TaqI	TCGA	6 cut(s)	21, 29, 241, 251, 1200, 1294
TasI	AATT	7 cut(s)	783, 818, 969, 1031, 1240, 1257, 1451
TatI	WGTACW	2 cut(s)	1479, 1818
TauI	GCSGC	2 cut(s)	799, 1210
TfiI	GAWTC	5 cut(s)	1220, 1523, 1557, 1737, 1744
Tru1I	TTAA	5 cut(s)	882, 1170, 1239, 1289, 1638
Tru9I	TTAA	5 cut(s)	882, 1170, 1239, 1289, 1638
TscAI	CASTG	5 cut(s)	42, 712, 797, 1059, 1630
TseFI	GTSAC	1 cut(s)	361
TseI	GCWGC	4 cut(s)	122, 513, 767, 1438
Tsp45I	GTSAC	1 cut(s)	361
TspDTI	ATGAA	2 cut(s)	1515, 1674
TspGWI	ACGGA	2 cut(s)	910, 1273
TspRI	CASTG	5 cut(s)	42, 712, 797, 1059, 1630
Van91I	CCANNNNNTGG	1 cut(s)	565
VpaK11BI	GGWCC	2 cut(s)	868, 908
XapI	RAATTY	3 cut(s)	783, 969, 1451
XbaI	TCTAGA	1 cut(s)	232
XceI	RCATGY	1 cut(s)	1819
XhoI	CTCGAG	1 cut(s)	1199
XmiI	GTMKAC	2 cut(s)	51, 251
XmnI	GAANNNNTTC	2 cut(s)	327, 843
XspI	CTAG	4 cut(s)	233, 848, 965, 1377
ZrmI	AGTACT	1 cut(s)	1481
Zsp2I	ATGCAT	1 cut(s)	382

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.