Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0009099

Physical Location & Seq

Genomic Coordinates Forward (+)

36793665 .. 36800284

Gene Structure 6620 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00244240.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1869 bp

ATGGGTTGGAGAAATGCGTTCGATAACTCGAAGCCACTGTTCATGGCTGTATACGCCACAGTCATAGTTGGGATTCTCTTCTCATCTTTGTATGTCATATCCGCCATTTACTCCGGCAAGGCTGCTACATTTTCCGCCACCTCCTTTCAGAACAATGTTGGTTCTTCCTCTTTAGAGCAAGCACCCAATGTTTCACAACCGGCGATATTAGAGAGTCGAAATGTGTCAATGAGGCCTATTTGGGAAGCTCCCCCACGCACAAAGAAAATGCCAAGGTTGAAGACTTTTAGACTGACCAAAGAACTGGTTCAGCAAAGAGTGAAGGATAATGTAGTTATTGTGACCTTTGGTAATTATGCATTTATGGATTTTATCCTGACATGGGTTAAACACTTGACTGATCTGGGGATTTCTAACCTTCTCGTTGGTGCAATGGATACCAAACTGTTGGAGGCTTTGTATTGGAAAGGTGTTCCAGTATTTGATATGGGCAGCCATATGAGCACAATAGATGTTGGATGGGGATCACCGACTTTCCACAAGATGGGAAGAGAAAAAGTTATACTGATAGACTCAATCCTCCCATATGGTTTTGAGCTCTTGATGTGTGATACAGACATGGTTTGGTTAAAGAACCCTCTTCCATTTCTTGCCCGCTATCCTGAAGCAGATGTCCTAACGTCTAGTGATCAAGTTGTACCTACAGTAGCTGATGATAGGCTGGACATCTGGCAACAAGTTGGTGCTGCCTATAATATTGGAATTTTCCACTGGCGGCCAACAGACCCTGCTAAAAAATTGGCTAAAGAATGGAAAGATATTCTTCTAGCTGATGACAAGATATGGGACCAGAATGGGTTTAATGATCTCGTAAGGAAGCAGTTAGGACCATCTGTTGATGGAGAAAGTGAACTTGTATATGCTTATGATGGAAGTCTCAAGCTAGGAATTTTGCCTGCGAGTATATTTTGTAGTGGGCATACATATTTTGTCCAGGGCATGTACCAGCAATTGAGGTTGGAGCCATATGCAGTGCATACCACGTTCCAGTATGCGGGTACTGATGGAAAGCGCCACCGACTACGTGAAGGAATGGTTTTCTATGACCCACCAGAATACTATGATGCACCAGGGGGTTTTTTGACTTTTAAGCCATCTATTCCTAAGATCTTGTTACTTGAGGGGCAGCATACTGTTGAATCACATTTTTCTCTTGTTAATTACCAAATAAAACAAATAAGGACGGCACTTGCTATTGCTTCTGTGTTAAATCGCACCCTGGTCATGCCTCCACTATGGTGCCGGTTGGACAGGCTGTGGTTTCCCCACCCTGGAGTTCTCGAGGGATCTTTGACTAGACAGCCTTTTCTTTGCCCTCTAGACCATGTATTTGAGGTAAATGTCATGCTCAAGGAACTGGCAGTGGAAGAATTTGGGCCCCAGATCAATATTAGAGAGTACTCATTCTTTGACAATCCATTGATGCCAAAACAGGTGAAAGATTCATGGCTTGATGTCCAGCTTTGTCAAGAAGGAATTCGAGACTGTCTGGCATCAAATAATACAAGCGCATCAGGAGTGCTCAGATTTCCAAAGAGAAGCAGTGAAGAGACGTTAAAGACAGTATTTTCTTCGTTCAAAGATGTCAAAGTAATTCAGTTTTCATCAATGCAAGATGCGTTCCTTGGTTTTGCTGACAAGATAAGGGTAGAGAGATTCAGGAATCGCGTGAAGCGATACGTTGGTATATGGTGTTGTGTAGCTGAGCATACTCCTGGCCACATATATTATGACATGTACTGGGATGAGAAACCAGGTTGGAAACCTATCCCACCTCAAAACCCACAGGATGACCACCCACCACCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005975 GO:0005976 GO:0006464 GO:0006486 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009653 GO:0009664 GO:0009832 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010383 GO:0010393 GO:0012505 GO:0016043 GO:0016051 GO:0016740 GO:0016757 GO:0016763 GO:0017144 GO:0019538 GO:0021700 GO:0022622 GO:0030154 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0033692 GO:0034637 GO:0034645 GO:0036211 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044036 GO:0044038 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044267 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045229 GO:0045488 GO:0045489 GO:0048364 GO:0048468 GO:0048469 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0052325 GO:0052546 GO:0052636 GO:0070085 GO:0070589 GO:0070592 GO:0071554 GO:0071555 GO:0071669 GO:0071695 GO:0071704 GO:0071840 GO:0080147 GO:0090558 GO:0090627 GO:0097708 GO:0098791 GO:0099402 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko00514 map00514

Pfam Domains

Protein Families

Nucleotid_trans

Protein Analysis

622

Amino Acids

70.9

Weight (kDa)

6.71

Isoelectric Point (pI)

41.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Nucleotid_trans	PF03407	137 - 361	1.1e-51	Nucleotide-diphospho-sugar transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009099)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35610
fragaria_vesca	FvH4_5g25240 FvH4_5g25240 FvH4_5g25240 FvH4_5g25240
malus_domestica	MD06G1008500.v1.1
prunus_persica	Prupe.5G011600_v2.0.a1 Prupe.5G011600_v2.0.a1 Prupe.5G011600_v2.0.a1 Prupe.5G011600_v2.0.a1 Prupe.5G011600_v2.0.a1
pyrus_communis	pycom16g25860
rosa_chinensis	RchiOBHm_Chr7g0215361
rosa_laevigata	RLG00000002667
rosa_multiflora	Rmu_sc0000355.1_g000013
rosa_roxburghii	Rroxscaffold_3G00244240
rosa_rugosa	Rorug07G0152700
rosa_samantha	Rh7AG289300 Rh7BG281300 Rh7CG309100 Rh7DG292900
rosa_wichuraiana	Rw7G024730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1299
AccB7I	CCANNNNNTGG	1 cut(s)	544
AccI	GTMKAC	1 cut(s)	51
AccII	CGCG	1 cut(s)	1728
AciI	CCGC	5 cut(s)	102, 135, 655, 775, 1055
AclWI	GGATC	2 cut(s)	532, 1354
AcoI	YGGCCR	2 cut(s)	776, 1777
AcsI	RAATTY	4 cut(s)	762, 948, 1430, 1536
AcuI	CTGAAG	1 cut(s)	684
AfaI	GTAC	5 cut(s)	699, 1004, 1060, 1460, 1799
AfiI	CCNNNNNNNGG	4 cut(s)	382, 544, 1054, 1331
AflIII	ACRYGT	1 cut(s)	1794
AgsI	TTSAA	3 cut(s)	280, 1199, 1639
AjnI	CCWGG	6 cut(s)	993, 1129, 1278, 1330, 1774, 1813
AleI	CACNNNNGTG	2 cut(s)	1297, 1864
AluBI	AGCT	7 cut(s)	248, 598, 710, 830, 943, 1522, 1763
AluI	AGCT	7 cut(s)	248, 598, 710, 830, 943, 1522, 1763
Alw21I	GWGCWC	3 cut(s)	506, 600, 1584
Alw26I	GTCTC	3 cut(s)	941, 1536, 1604
AlwI	GGATC	2 cut(s)	532, 1354
AlwNI	CAGNNNCTG	2 cut(s)	710, 788
Ama87I	CYCGRG	1 cut(s)	1340
AoxI	GGCC	4 cut(s)	233, 776, 1436, 1777
ApaI	GGGCCC	1 cut(s)	1440
ApeKI	GCWGC	4 cut(s)	122, 492, 746, 1186
ApoI	RAATTY	4 cut(s)	762, 948, 1430, 1536
ArsI	GACNNNNNNTTYG	2 cut(s)	1373, 1405
Asp700I	GAANNNNTTC	2 cut(s)	306, 1536
AspLEI	GCGC	2 cut(s)	1074, 1571
AspS9I	GGNCC	4 cut(s)	847, 887, 1436, 1437
AsuHPI	GGTGA	2 cut(s)	519, 1507
AvaI	CYCGRG	1 cut(s)	1340
AvaII	GGWCC	2 cut(s)	847, 887
BaeGI	GKGCMC	1 cut(s)	1440
BaeI	ACNNNNGTAYC	2 cut(s)	1729, 1762
BalI	TGGCCA	1 cut(s)	1779
BanI	GGYRCC	1 cut(s)	1299
BanII	GRGCYC	2 cut(s)	600, 1440
BbsI	GAAGAC	1 cut(s)	287
Bbv12I	GWGCWC	3 cut(s)	506, 600, 1584
BbvI	GCAGC	4 cut(s)	109, 504, 733, 1198
BccI	CCATC	7 cut(s)	513, 538, 893, 898, 923, 1058, 1162
BceAI	ACGGC	1 cut(s)	1260
BciT130I	CCWGG	6 cut(s)	995, 1131, 1280, 1332, 1776, 1815
BciVI	GTATCC	1 cut(s)	430
BclI	TGATCA	1 cut(s)	688
BcoDI	GTCTC	3 cut(s)	941, 1536, 1604
BfaI	CTAG	5 cut(s)	684, 827, 944, 1356, 1379
BfmI	CTRYAG	1 cut(s)	702
BfoI	RGCGCY	1 cut(s)	1075
BfuI	GTATCC	1 cut(s)	430
BglII	AGATCT	1 cut(s)	1167
BisI	GCNGC	5 cut(s)	123, 493, 747, 776, 1187
BlpI	GCTNAGC	1 cut(s)	1764
BlsI	GCNGC	5 cut(s)	124, 494, 748, 777, 1188
BmcAI	AGTACT	1 cut(s)	1460
Bme1390I	CCNGG	6 cut(s)	995, 1131, 1280, 1332, 1776, 1815
Bme18I	GGWCC	2 cut(s)	847, 887
BmeT110I	CYCGRG	1 cut(s)	1340
BmgT120I	GGNCC	4 cut(s)	847, 887, 1436, 1437
BmiI	GGNNCC	5 cut(s)	848, 1023, 1301, 1438, 1439
BmrFI	CCNGG	6 cut(s)	995, 1131, 1280, 1332, 1776, 1815
BmrI	ACTGGG	1 cut(s)	1810
BmsI	GCATC	5 cut(s)	1114, 1473, 1562, 1580, 1666
BmuI	ACTGGG	1 cut(s)	1810
BpiI	GAAGAC	1 cut(s)	287
BpmI	CTGGAG	1 cut(s)	1353
Bpu1102I	GCTNAGC	1 cut(s)	1764
BpuEI	CTTGAG	3 cut(s)	923, 1199, 1394
BsaAI	YACGTR	1 cut(s)	1085
BsaBI	GATNNNNATC	1 cut(s)	523
BsaJI	CCNNGG	6 cut(s)	272, 994, 1130, 1278, 1330, 1684
BsaXI	ACNNNNNCTCC	2 cut(s)	443, 473
Bsc4I	CCNNNNNNNGG	4 cut(s)	382, 544, 1054, 1331
Bse118I	RCCGGY	2 cut(s)	199, 1302
Bse1I	ACTGG	6 cut(s)	309, 476, 776, 1048, 1422, 1805
Bse3DI	GCAATG	1 cut(s)	438
Bse8I	GATNNNNATC	1 cut(s)	523
BseBI	CCWGG	6 cut(s)	995, 1131, 1280, 1332, 1776, 1815
BseDI	CCNNGG	6 cut(s)	272, 994, 1130, 1278, 1330, 1684
BseGI	GGATG	3 cut(s)	524, 1810, 1855
BseJI	GATNNNNATC	1 cut(s)	523
BseLI	CCNNNNNNNGG	4 cut(s)	382, 544, 1054, 1331
BseMI	GCAATG	1 cut(s)	438
BseMII	CTCAG	2 cut(s)	1597, 1755
BseNI	ACTGG	6 cut(s)	309, 476, 776, 1048, 1422, 1805
BseSI	GKGCMC	1 cut(s)	1440
BseXI	GCAGC	4 cut(s)	109, 504, 733, 1198
Bsh1236I	CGCG	1 cut(s)	1728
BshFI	GGCC	4 cut(s)	235, 778, 1438, 1779
BshNI	GGYRCC	1 cut(s)	1299
BsiHKAI	GWGCWC	3 cut(s)	506, 600, 1584
BsiHKCI	CYCGRG	1 cut(s)	1340
BsiSI	CCGG	3 cut(s)	114, 200, 1303
BslFI	GGGAC	1 cut(s)	860
BslI	CCNNNNNNNGG	4 cut(s)	382, 544, 1054, 1331
BsmAI	GTCTC	3 cut(s)	941, 1536, 1604
BsmBI	CGTCTC	1 cut(s)	1604
BsmFI	GGGAC	1 cut(s)	860
BsnI	GGCC	4 cut(s)	235, 778, 1438, 1779
BsoBI	CYCGRG	1 cut(s)	1340
Bsp120I	GGGCCC	1 cut(s)	1436
Bsp1286I	GDGCHC	4 cut(s)	506, 600, 1440, 1584
Bsp143I	GATC	7 cut(s)	400, 524, 688, 865, 1167, 1346, 1443
Bsp1720I	GCTNAGC	1 cut(s)	1764
BspACI	CCGC	5 cut(s)	102, 135, 655, 775, 1055
BspANI	GGCC	4 cut(s)	235, 778, 1438, 1779
BspCNI	CTCAG	2 cut(s)	1596, 1756
BspFNI	CGCG	1 cut(s)	1728
BspLI	GGNNCC	5 cut(s)	848, 1023, 1301, 1438, 1439
BspPI	GGATC	2 cut(s)	532, 1354
BspT107I	GGYRCC	1 cut(s)	1299
BsrDI	GCAATG	1 cut(s)	438
BsrFI	RCCGGY	2 cut(s)	199, 1302
BsrI	ACTGG	6 cut(s)	309, 476, 776, 1048, 1422, 1805
BssAI	RCCGGY	2 cut(s)	199, 1302
BssECI	CCNNGG	6 cut(s)	272, 994, 1130, 1278, 1330, 1684
BssMI	GATC	7 cut(s)	400, 524, 688, 865, 1167, 1346, 1443
BssNAI	GTATAC	1 cut(s)	52
BssT1I	CCWWGG	2 cut(s)	272, 1684
Bst1107I	GTATAC	1 cut(s)	52
Bst2UI	CCWGG	6 cut(s)	995, 1131, 1280, 1332, 1776, 1815
Bst4CI	ACNGT	8 cut(s)	39, 61, 447, 706, 1195, 1547, 1624, 1866
Bst6I	CTCTTC	4 cut(s)	83, 544, 645, 1602
BstBAI	YACGTR	1 cut(s)	1085
BstC8I	GCNNGC	3 cut(s)	180, 655, 957
BstDEI	CTNAG	3 cut(s)	1164, 1583, 1764
BstF5I	GGATG	3 cut(s)	524, 1810, 1855
BstFNI	CGCG	1 cut(s)	1728
BstH2I	RGCGCY	1 cut(s)	1075
BstHHI	GCGC	2 cut(s)	1074, 1571
BstKTI	GATC	7 cut(s)	403, 527, 691, 868, 1170, 1349, 1446
BstMAI	GTCTC	3 cut(s)	941, 1536, 1604
BstMBI	GATC	7 cut(s)	400, 524, 688, 865, 1167, 1346, 1443
BstMWI	GCNNNNNNNGC	2 cut(s)	53, 501
BstNI	CCWGG	6 cut(s)	995, 1131, 1280, 1332, 1776, 1815
BstNSI	RCATGY	2 cut(s)	1003, 1798
BstSCI	CCNGG	6 cut(s)	993, 1129, 1278, 1330, 1774, 1813
BstSFI	CTRYAG	1 cut(s)	702
BstSLI	GKGCMC	1 cut(s)	1440
BstUI	CGCG	1 cut(s)	1728
BstV1I	GCAGC	4 cut(s)	109, 504, 733, 1198
BstV2I	GAAGAC	1 cut(s)	287
BstX2I	RGATCY	2 cut(s)	1167, 1346
BstXI	CCANNNNNNTGG	2 cut(s)	304, 448
BstYI	RGATCY	2 cut(s)	1167, 1346
BstZ17I	GTATAC	1 cut(s)	52
BsuI	GTATCC	1 cut(s)	430
BsuRI	GGCC	4 cut(s)	235, 778, 1438, 1779
BtsCI	GGATG	3 cut(s)	524, 1810, 1855
BtsI	GCAGTG	3 cut(s)	1038, 1428, 1609
BtsIMutI	CAGTG	5 cut(s)	35, 769, 1038, 1428, 1609
Cac8I	GCNNGC	3 cut(s)	180, 655, 957
CaiI	CAGNNNCTG	2 cut(s)	710, 788
CfoI	GCGC	2 cut(s)	1074, 1571
Cfr10I	RCCGGY	2 cut(s)	199, 1302
Cfr13I	GGNCC	4 cut(s)	847, 887, 1436, 1437
CsiI	ACCWGGT	1 cut(s)	1813
Csp6I	GTAC	5 cut(s)	698, 1003, 1059, 1459, 1798
CviAII	CATG	9 cut(s)	43, 381, 619, 1000, 1285, 1385, 1405, 1506, 1795
CviQI	GTAC	5 cut(s)	698, 1003, 1059, 1459, 1798
DdeI	CTNAG	3 cut(s)	1164, 1583, 1764
DpnI	GATC	7 cut(s)	402, 526, 690, 867, 1169, 1348, 1445
DpnII	GATC	7 cut(s)	400, 524, 688, 865, 1167, 1346, 1443
EaeI	YGGCCR	2 cut(s)	776, 1777
Eam1104I	CTCTTC	4 cut(s)	83, 544, 645, 1602
EarI	CTCTTC	4 cut(s)	83, 544, 645, 1602
EciI	GGCGGA	2 cut(s)	91, 124
Ecl136II	GAGCTC	1 cut(s)	598
Eco130I	CCWWGG	2 cut(s)	272, 1684
Eco147I	AGGCCT	1 cut(s)	235
Eco24I	GRGCYC	2 cut(s)	600, 1440
Eco47I	GGWCC	2 cut(s)	847, 887
Eco53kI	GAGCTC	1 cut(s)	598
Eco57I	CTGAAG	1 cut(s)	684
Eco88I	CYCGRG	1 cut(s)	1340
EcoICRI	GAGCTC	1 cut(s)	598
EcoO109I	RGGNCCY	1 cut(s)	1437
EcoRI	GAATTC	1 cut(s)	1536
EcoRII	CCWGG	6 cut(s)	993, 1129, 1278, 1330, 1774, 1813
EcoT14I	CCWWGG	2 cut(s)	272, 1684
EcoT22I	ATGCAT	1 cut(s)	361
EcoT38I	GRGCYC	2 cut(s)	600, 1440
ErhI	CCWWGG	2 cut(s)	272, 1684
Esp3I	CGTCTC	1 cut(s)	1604
FaeI	CATG	9 cut(s)	46, 384, 622, 1003, 1288, 1388, 1408, 1509, 1798
FalI	AAGNNNNNCTT	2 cut(s)	807, 839
FaqI	GGGAC	1 cut(s)	860
FatI	CATG	9 cut(s)	42, 380, 618, 999, 1284, 1384, 1404, 1505, 1794
FauI	CCCGC	2 cut(s)	662, 1048
FauNDI	CATATG	3 cut(s)	498, 586, 1027
FbaI	TGATCA	1 cut(s)	688
FblI	GTMKAC	1 cut(s)	51
Fnu4HI	GCNGC	5 cut(s)	123, 493, 747, 776, 1187
FokI	GGATG	3 cut(s)	531, 1817, 1862
FriOI	GRGCYC	2 cut(s)	600, 1440
Fsp4HI	GCNGC	5 cut(s)	123, 493, 747, 776, 1187
FspBI	CTAG	5 cut(s)	684, 827, 944, 1356, 1379
GlaI	GCGC	2 cut(s)	1073, 1570
GluI	GCNGC	5 cut(s)	123, 493, 747, 776, 1187
GsuI	CTGGAG	1 cut(s)	1353
HaeII	RGCGCY	1 cut(s)	1075
HaeIII	GGCC	4 cut(s)	235, 778, 1438, 1779
HapII	CCGG	3 cut(s)	114, 200, 1303
HhaI	GCGC	2 cut(s)	1074, 1571
Hin1II	CATG	9 cut(s)	46, 384, 622, 1003, 1288, 1388, 1408, 1509, 1798
Hin6I	GCGC	2 cut(s)	1072, 1569
HinP1I	GCGC	2 cut(s)	1072, 1569
HinfI	GANTC	7 cut(s)	73, 214, 572, 1199, 1502, 1716, 1723
HpaII	CCGG	3 cut(s)	114, 200, 1303
HphI	GGTGA	2 cut(s)	519, 1507
Hpy166II	GTNNAC	2 cut(s)	52, 911
Hpy188I	TCNGA	2 cut(s)	150, 1586
Hpy188III	TCNNGA	9 cut(s)	376, 601, 662, 1340, 1379, 1529, 1541, 1575, 1720
Hpy8I	GTNNAC	2 cut(s)	52, 911
HpyAV	CCTTC	4 cut(s)	316, 428, 1082, 1526
HpyCH4III	ACNGT	8 cut(s)	39, 61, 447, 706, 1195, 1547, 1624, 1866
HpyCH4IV	ACGT	5 cut(s)	680, 1043, 1084, 1613, 1740
HpyCH4V	TGCA	6 cut(s)	359, 431, 1031, 1036, 1127, 1672
HpyF10VI	GCNNNNNNNGC	2 cut(s)	53, 501
HpyF3I	CTNAG	3 cut(s)	1164, 1583, 1764
HpySE526I	ACGT	5 cut(s)	680, 1043, 1084, 1613, 1740
Hsp92II	CATG	9 cut(s)	46, 384, 622, 1003, 1288, 1388, 1408, 1509, 1798
HspAI	GCGC	2 cut(s)	1072, 1569
Ksp22I	TGATCA	1 cut(s)	688
Kzo9I	GATC	7 cut(s)	400, 524, 688, 865, 1167, 1346, 1443
LmnI	GCTCC	2 cut(s)	253, 1021
Lsp1109I	GCAGC	4 cut(s)	109, 504, 733, 1198
LweI	GCATC	5 cut(s)	1114, 1473, 1562, 1580, 1666
MabI	ACCWGGT	1 cut(s)	1813
MaeI	CTAG	5 cut(s)	684, 827, 944, 1356, 1379
MaeII	ACGT	5 cut(s)	680, 1043, 1084, 1613, 1740
MaeIII	GTNAC	2 cut(s)	340, 1173
MalI	GATC	7 cut(s)	402, 526, 690, 867, 1169, 1348, 1445
MboI	GATC	7 cut(s)	400, 524, 688, 865, 1167, 1346, 1443
MboII	GAAGA	9 cut(s)	70, 156, 292, 561, 632, 815, 1439, 1619, 1623
MfeI	CAATTG	1 cut(s)	1010
MflI	RGATCY	2 cut(s)	1167, 1346
MhlI	GDGCHC	4 cut(s)	506, 600, 1440, 1584
MlsI	TGGCCA	1 cut(s)	1779
MluCI	AATT	9 cut(s)	352, 762, 797, 948, 1010, 1219, 1430, 1536, 1653
MluNI	TGGCCA	1 cut(s)	1779
MlyI	GAGTC	2 cut(s)	223, 566
MmeI	TCCRAC	5 cut(s)	429, 496, 999, 1287, 1799
Mox20I	TGGCCA	1 cut(s)	1779
Mph1103I	ATGCAT	1 cut(s)	361
MroXI	GAANNNNTTC	2 cut(s)	306, 1536
MscI	TGGCCA	1 cut(s)	1779
MseI	TTAA	7 cut(s)	387, 629, 861, 1149, 1218, 1268, 1616
MslI	CAYNNNNRTG	2 cut(s)	1297, 1864
Msp20I	TGGCCA	1 cut(s)	1779
MspI	CCGG	3 cut(s)	114, 200, 1303
MspR9I	CCNGG	6 cut(s)	995, 1131, 1280, 1332, 1776, 1815
MunI	CAATTG	1 cut(s)	1010
MvaI	CCWGG	6 cut(s)	995, 1131, 1280, 1332, 1776, 1815
MvnI	CGCG	1 cut(s)	1728
MwoI	GCNNNNNNNGC	2 cut(s)	53, 501
NdeI	CATATG	3 cut(s)	498, 586, 1027
NdeII	GATC	7 cut(s)	400, 524, 688, 865, 1167, 1346, 1443
NlaIII	CATG	9 cut(s)	46, 384, 622, 1003, 1288, 1388, 1408, 1509, 1798
NlaIV	GGNNCC	5 cut(s)	848, 1023, 1301, 1438, 1439
NmuCI	GTSAC	1 cut(s)	340
NsiI	ATGCAT	1 cut(s)	361
NspI	RCATGY	2 cut(s)	1003, 1798
OliI	CACNNNNGTG	2 cut(s)	1297, 1864
PaeR7I	CTCGAG	1 cut(s)	1340
PceI	AGGCCT	1 cut(s)	235
PciI	ACATGT	1 cut(s)	1794
PcsI	WCGNNNNNNNCGW	1 cut(s)	1732
PdmI	GAANNNNTTC	2 cut(s)	306, 1536
PfeI	GAWTC	5 cut(s)	73, 1199, 1502, 1716, 1723
PflMI	CCANNNNNTGG	1 cut(s)	544
PkrI	GCNGC	5 cut(s)	124, 494, 748, 777, 1188
PleI	GAGTC	2 cut(s)	222, 566
PpsI	GAGTC	2 cut(s)	222, 566
Ppu21I	YACGTR	1 cut(s)	1085
PscI	ACATGT	1 cut(s)	1794
Psp124BI	GAGCTC	1 cut(s)	600
Psp6I	CCWGG	6 cut(s)	993, 1129, 1278, 1330, 1774, 1813
PspGI	CCWGG	6 cut(s)	993, 1129, 1278, 1330, 1774, 1813
PspN4I	GGNNCC	5 cut(s)	848, 1023, 1301, 1438, 1439
PspOMI	GGGCCC	1 cut(s)	1436
PspPI	GGNCC	4 cut(s)	847, 887, 1436, 1437
PstNI	CAGNNNCTG	2 cut(s)	710, 788
PsuI	RGATCY	2 cut(s)	1167, 1346
RsaI	GTAC	5 cut(s)	699, 1004, 1060, 1460, 1799
RsaNI	GTAC	5 cut(s)	698, 1003, 1059, 1459, 1798
RseI	CAYNNNNRTG	2 cut(s)	1297, 1864
SacI	GAGCTC	1 cut(s)	600
SaqAI	TTAA	7 cut(s)	387, 629, 861, 1149, 1218, 1268, 1616
SatI	GCNGC	5 cut(s)	123, 493, 747, 776, 1187
Sau3AI	GATC	7 cut(s)	400, 524, 688, 865, 1167, 1346, 1443
Sau96I	GGNCC	4 cut(s)	847, 887, 1436, 1437
ScaI	AGTACT	1 cut(s)	1460
SchI	GAGTC	2 cut(s)	223, 566
ScrFI	CCNGG	6 cut(s)	995, 1131, 1280, 1332, 1776, 1815
SduI	GDGCHC	4 cut(s)	506, 600, 1440, 1584
SexAI	ACCWGGT	1 cut(s)	1813
SfaNI	GCATC	5 cut(s)	1114, 1473, 1562, 1580, 1666
SfcI	CTRYAG	1 cut(s)	702
Sfr274I	CTCGAG	1 cut(s)	1340
SinI	GGWCC	2 cut(s)	847, 887
SlaI	CTCGAG	1 cut(s)	1340
SmiMI	CAYNNNNRTG	2 cut(s)	1297, 1864
SmlI	CTYRAG	4 cut(s)	938, 1178, 1340, 1409
SmoI	CTYRAG	4 cut(s)	938, 1178, 1340, 1409
Sse9I	AATT	9 cut(s)	352, 762, 797, 948, 1010, 1219, 1430, 1536, 1653
SseBI	AGGCCT	1 cut(s)	235
SsiI	CCGC	5 cut(s)	102, 135, 655, 775, 1055
SspI	AATATT	2 cut(s)	757, 1450
SspMI	CTAG	5 cut(s)	684, 827, 944, 1356, 1379
SstI	GAGCTC	1 cut(s)	600
StuI	AGGCCT	1 cut(s)	235
StyD4I	CCNGG	6 cut(s)	993, 1129, 1278, 1330, 1774, 1813
StyI	CCWWGG	2 cut(s)	272, 1684
TaaI	ACNGT	8 cut(s)	39, 61, 447, 706, 1195, 1547, 1624, 1866
TaiI	ACGT	5 cut(s)	683, 1046, 1087, 1616, 1743
TaqI	TCGA	5 cut(s)	21, 29, 217, 1341, 1540
TasI	AATT	9 cut(s)	352, 762, 797, 948, 1010, 1219, 1430, 1536, 1653
TatI	WGTACW	2 cut(s)	1458, 1797
TauI	GCSGC	1 cut(s)	778
TfiI	GAWTC	5 cut(s)	73, 1199, 1502, 1716, 1723
Tru1I	TTAA	7 cut(s)	387, 629, 861, 1149, 1218, 1268, 1616
Tru9I	TTAA	7 cut(s)	387, 629, 861, 1149, 1218, 1268, 1616
TscAI	CASTG	5 cut(s)	42, 776, 1038, 1428, 1609
TseFI	GTSAC	1 cut(s)	340
TseI	GCWGC	4 cut(s)	122, 492, 746, 1186
Tsp45I	GTSAC	1 cut(s)	340
TspDTI	ATGAA	3 cut(s)	31, 1494, 1653
TspRI	CASTG	5 cut(s)	42, 776, 1038, 1428, 1609
Van91I	CCANNNNNTGG	1 cut(s)	544
VpaK11BI	GGWCC	2 cut(s)	847, 887
XapI	RAATTY	4 cut(s)	762, 948, 1430, 1536
XbaI	TCTAGA	1 cut(s)	1378
XceI	RCATGY	2 cut(s)	1003, 1798
XhoI	CTCGAG	1 cut(s)	1340
XmiI	GTMKAC	1 cut(s)	51
XmnI	GAANNNNTTC	2 cut(s)	306, 1536
XspI	CTAG	5 cut(s)	684, 827, 944, 1356, 1379
ZrmI	AGTACT	1 cut(s)	1460
Zsp2I	ATGCAT	1 cut(s)	361

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.