Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0009099

Physical Location & Seq

Genomic Coordinates Forward (+)

37754949 .. 37761134

Gene Structure 6186 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000002667

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1893 bp

ATGGGTTGGAGAAATGCGTTCGATAACTCGAAGCCACTGTTCGTGGCTGTATACGCCACCGTCATAGTTGGGATTCTCTTCTCAGCTTTGTATGTCATATCCGCCATTTACTCCGGCAAGGCTGCTACATTTTCCGCCACCTCCTTTCAGAACAATGTTGGTTCTTCCTCTTTAGAGCAAGCACCCAATGTTTCACAACCGGCGAGTGTTCAAGGGGTGTCCACACCTAAATTAGAGAGTCGAAATGTGTCGATGAGGCCTATTTGGGAAGCTCCCCCACGCACAGAGAAAATGCCACGGTTGAAGACTTTTAGACTGACCAAAGAACTGGTTCAGCAAAGAGTGAAGGATAATGTAGTTATAGTGACCTTTGGTAACTATGCATTTATGGATTTTATCCTGACATGGGTTAAACACTTGACTGATCTGGGGATTTCTAACCTTCTCGTTGGTGCAATGGATACCAAACTGTTGGAGGCTTTGTATTGGAAAGGTGTTCCAGTATTTGATATGGGCAGCCATATGAGCACAATAGATGTTGGATGGGGATCGCCAACATTCCACAAGATGGGAAGAGAAAAAGTTATACTGATAGACTCAATCCTCCCATATGGTTTTGAGCTCTTGATGTGTGATACGGACATGGTTTGGTTAAAGAACCCTCTTCCATTTCTTGCCCGCTATCCTGAAGCAGATGTCCTAACATCTAGTGATCAAGTTGTACCTACAGTAGCTGATGACAGGCTGGACATCTGGCAACAAGTTGGTGCTGCCTATAATATTGGAATTTTCCACTGGCGGCCAACAAACCCTGCTAAAAAATTGGCTAAAGAATGGAAAGATATGCTTCTAGCTGATGACAAGATATGGGACCAGAATGGGTTTAATGATCTCGTAAGGAAGCAGTTAGGACCATCTGTTGATGGAGAAAGTGAACTTGTATATGCTTATGATGGAAGTCTCAAGCTAGGAATTTTGCCTGCGAGTATATTTTGTAGTGGGCATACATATTTTGTCCAGACCATGTACCAGCAATTGAGGTTGGAGCCGTATGCAGTGCATACCACGTTCCAGTATGCGGGTACTGATGGAAAGCGCCACCGACTACGTGAAGGAATGGTTTTCTATGACCCGCCAGAATACTATGATGCACCAGGGGGTTTTTTGACTTTTAAGCCATCTATTCCTAAGATCTTGTTACTTGAGGGGCAGCATACTGTTGAATCACATTTTGCTCTTGTTAATTACCAAATAAAACAAATAAGGACGGCACTTGCTATTGCTTCTGTGTTAAATCGCACCCTGGTCATGCCTCCACTATGGTGCAGGTTGGACAGGCTGTGGTTTCCCCACCCTGGAGTTCTCGAGGGATCTTTGACTAGACAGCCTTTTCTTTGCCCTCTAGATCATGTATTTGAGGTAAATGTCATGCTCAAGGAACTGCCAGTGGAAGAATTTGGGCCCCAGATCAATATTAGAGAGTACTCATTCTTTGACAATCCACTGATGCCAAAACAGGTCAAAGATTCATGGCTTGAAGTCCAGCTTTGTCAAGAAGGAATTCGAGACTGTCTGGCATCAAATAATACAAGCCCATCAGGAGTGCTCAGATTTCCAAAGAGAAGCAGTGAAGAGACGTTAAAGACAGTATTTTCCTCTTTCAAAGATGTCAAAGTAATTCAGTTTTCATCAATGCAAGATGCGTTCCTTGGTTTTGCTGACAATATAAGTCAAGAGAGATTCAGGAATCGCGTGAAGCGATACGTTGGTATATGGTGTTGTGTAGCTGAGCATACTCCTGGCCACATATATTATGACATGTACTGGGATGAGAAACCAGGTTGGAAACCTATCCCACCTCAAAACCCACAGGATGACCACCCACCACCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005975 GO:0005976 GO:0006464 GO:0006486 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009653 GO:0009664 GO:0009832 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010383 GO:0010393 GO:0012505 GO:0016043 GO:0016051 GO:0016740 GO:0016757 GO:0016763 GO:0017144 GO:0019538 GO:0021700 GO:0022622 GO:0030154 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0033692 GO:0034637 GO:0034645 GO:0036211 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044036 GO:0044038 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044267 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045229 GO:0045488 GO:0045489 GO:0048364 GO:0048468 GO:0048469 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0052325 GO:0052546 GO:0052636 GO:0070085 GO:0070589 GO:0070592 GO:0071554 GO:0071555 GO:0071669 GO:0071695 GO:0071704 GO:0071840 GO:0080147 GO:0090558 GO:0090627 GO:0097708 GO:0098791 GO:0099402 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko00514 map00514

Pfam Domains

Protein Families

Nucleotid_trans

Protein Analysis

631

Amino Acids

71.68

Weight (kDa)

6.42

Isoelectric Point (pI)

42.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Nucleotid_trans	PF03407	145 - 369	1.2e-52	Nucleotide-diphospho-sugar transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009099)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35610
fragaria_vesca	FvH4_5g25240 FvH4_5g25240 FvH4_5g25240 FvH4_5g25240
malus_domestica	MD06G1008500.v1.1
prunus_persica	Prupe.5G011600_v2.0.a1 Prupe.5G011600_v2.0.a1 Prupe.5G011600_v2.0.a1 Prupe.5G011600_v2.0.a1 Prupe.5G011600_v2.0.a1
pyrus_communis	pycom16g25860
rosa_chinensis	RchiOBHm_Chr7g0215361
rosa_laevigata	RLG00000002667
rosa_multiflora	Rmu_sc0000355.1_g000013
rosa_roxburghii	Rroxscaffold_3G00244240
rosa_rugosa	Rorug07G0152700
rosa_samantha	Rh7AG289300 Rh7BG281300 Rh7CG309100 Rh7DG292900
rosa_wichuraiana	Rw7G024730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1317
AccB7I	CCANNNNNTGG	1 cut(s)	568
AccI	GTMKAC	1 cut(s)	51
AccII	CGCG	1 cut(s)	1752
AciI	CCGC	6 cut(s)	102, 135, 679, 799, 1079, 1133
AclWI	GGATC	2 cut(s)	556, 1378
AcoI	YGGCCR	2 cut(s)	800, 1801
AcsI	RAATTY	4 cut(s)	786, 972, 1454, 1560
AcuI	CTGAAG	1 cut(s)	708
AfaI	GTAC	5 cut(s)	723, 1028, 1084, 1484, 1823
AfiI	CCNNNNNNNGG	4 cut(s)	406, 568, 1078, 1355
AflIII	ACRYGT	1 cut(s)	1818
AgsI	TTSAA	5 cut(s)	212, 304, 1223, 1538, 1663
AjnI	CCWGG	5 cut(s)	1153, 1302, 1354, 1798, 1837
AleI	CACNNNNGTG	2 cut(s)	1321, 1888
AluBI	AGCT	8 cut(s)	86, 272, 622, 734, 854, 967, 1546, 1787
AluI	AGCT	8 cut(s)	86, 272, 622, 734, 854, 967, 1546, 1787
Alw21I	GWGCWC	3 cut(s)	530, 624, 1608
Alw26I	GTCTC	3 cut(s)	965, 1560, 1628
AlwI	GGATC	2 cut(s)	556, 1378
AlwNI	CAGNNNCTG	1 cut(s)	734
Ama87I	CYCGRG	1 cut(s)	1364
AoxI	GGCC	4 cut(s)	257, 800, 1460, 1801
ApaI	GGGCCC	1 cut(s)	1464
ApeKI	GCWGC	4 cut(s)	122, 516, 770, 1210
ApoI	RAATTY	4 cut(s)	786, 972, 1454, 1560
Asp700I	GAANNNNTTC	2 cut(s)	330, 1560
AspLEI	GCGC	1 cut(s)	1098
AspS9I	GGNCC	4 cut(s)	871, 911, 1460, 1461
AvaI	CYCGRG	1 cut(s)	1364
AvaII	GGWCC	2 cut(s)	871, 911
BaeGI	GKGCMC	1 cut(s)	1464
BaeI	ACNNNNGTAYC	2 cut(s)	1753, 1786
BalI	TGGCCA	1 cut(s)	1803
BanII	GRGCYC	2 cut(s)	624, 1464
BbsI	GAAGAC	1 cut(s)	311
Bbv12I	GWGCWC	3 cut(s)	530, 624, 1608
BbvI	GCAGC	4 cut(s)	109, 528, 757, 1222
BccI	CCATC	8 cut(s)	537, 562, 917, 922, 947, 1082, 1186, 1603
BceAI	ACGGC	2 cut(s)	1033, 1284
BciT130I	CCWGG	5 cut(s)	1155, 1304, 1356, 1800, 1839
BciVI	GTATCC	1 cut(s)	454
BclI	TGATCA	1 cut(s)	712
BcoDI	GTCTC	3 cut(s)	965, 1560, 1628
BfaI	CTAG	5 cut(s)	708, 851, 968, 1380, 1403
BfmI	CTRYAG	1 cut(s)	726
BfoI	RGCGCY	1 cut(s)	1099
BfuAI	ACCTGC	1 cut(s)	1317
BfuI	GTATCC	1 cut(s)	454
BglII	AGATCT	1 cut(s)	1191
BisI	GCNGC	5 cut(s)	123, 517, 771, 800, 1211
BlpI	GCTNAGC	1 cut(s)	1788
BlsI	GCNGC	5 cut(s)	124, 518, 772, 801, 1212
BmcAI	AGTACT	1 cut(s)	1484
Bme1390I	CCNGG	5 cut(s)	1155, 1304, 1356, 1800, 1839
Bme18I	GGWCC	2 cut(s)	871, 911
BmeT110I	CYCGRG	1 cut(s)	1364
BmgT120I	GGNCC	4 cut(s)	871, 911, 1460, 1461
BmiI	GGNNCC	4 cut(s)	872, 1047, 1462, 1463
BmrFI	CCNGG	5 cut(s)	1155, 1304, 1356, 1800, 1839
BmrI	ACTGGG	1 cut(s)	1834
BmsI	GCATC	4 cut(s)	1138, 1497, 1586, 1690
BmuI	ACTGGG	1 cut(s)	1834
BpiI	GAAGAC	1 cut(s)	311
BpmI	CTGGAG	1 cut(s)	1377
Bpu1102I	GCTNAGC	1 cut(s)	1788
BpuEI	CTTGAG	3 cut(s)	947, 1223, 1418
BsaAI	YACGTR	1 cut(s)	1109
BsaBI	GATNNNNATC	1 cut(s)	547
BsaJI	CCNNGG	5 cut(s)	296, 1154, 1302, 1354, 1708
BsaXI	ACNNNNNCTCC	2 cut(s)	467, 497
Bsc4I	CCNNNNNNNGG	4 cut(s)	406, 568, 1078, 1355
Bse118I	RCCGGY	1 cut(s)	199
Bse1I	ACTGG	6 cut(s)	333, 500, 800, 1072, 1445, 1829
Bse3DI	GCAATG	1 cut(s)	462
Bse8I	GATNNNNATC	1 cut(s)	547
BseBI	CCWGG	5 cut(s)	1155, 1304, 1356, 1800, 1839
BseDI	CCNNGG	5 cut(s)	296, 1154, 1302, 1354, 1708
BseGI	GGATG	3 cut(s)	548, 1834, 1879
BseJI	GATNNNNATC	1 cut(s)	547
BseLI	CCNNNNNNNGG	4 cut(s)	406, 568, 1078, 1355
BseMI	GCAATG	1 cut(s)	462
BseMII	CTCAG	3 cut(s)	96, 1621, 1779
BseNI	ACTGG	6 cut(s)	333, 500, 800, 1072, 1445, 1829
BseSI	GKGCMC	1 cut(s)	1464
BseXI	GCAGC	4 cut(s)	109, 528, 757, 1222
BsgI	GTGCAG	1 cut(s)	1345
Bsh1236I	CGCG	1 cut(s)	1752
BshFI	GGCC	4 cut(s)	259, 802, 1462, 1803
BsiHKAI	GWGCWC	3 cut(s)	530, 624, 1608
BsiHKCI	CYCGRG	1 cut(s)	1364
BsiSI	CCGG	2 cut(s)	114, 200
BslFI	GGGAC	1 cut(s)	884
BslI	CCNNNNNNNGG	4 cut(s)	406, 568, 1078, 1355
BsmAI	GTCTC	3 cut(s)	965, 1560, 1628
BsmBI	CGTCTC	1 cut(s)	1628
BsmFI	GGGAC	1 cut(s)	884
BsnI	GGCC	4 cut(s)	259, 802, 1462, 1803
BsoBI	CYCGRG	1 cut(s)	1364
Bsp120I	GGGCCC	1 cut(s)	1460
Bsp1286I	GDGCHC	4 cut(s)	530, 624, 1464, 1608
Bsp143I	GATC	8 cut(s)	424, 548, 712, 889, 1191, 1370, 1405, 1467
Bsp1720I	GCTNAGC	1 cut(s)	1788
BspACI	CCGC	6 cut(s)	102, 135, 679, 799, 1079, 1133
BspANI	GGCC	4 cut(s)	259, 802, 1462, 1803
BspCNI	CTCAG	3 cut(s)	95, 1620, 1780
BspFNI	CGCG	1 cut(s)	1752
BspLI	GGNNCC	4 cut(s)	872, 1047, 1462, 1463
BspMI	ACCTGC	1 cut(s)	1317
BspPI	GGATC	2 cut(s)	556, 1378
BsrDI	GCAATG	1 cut(s)	462
BsrFI	RCCGGY	1 cut(s)	199
BsrI	ACTGG	6 cut(s)	333, 500, 800, 1072, 1445, 1829
BssAI	RCCGGY	1 cut(s)	199
BssECI	CCNNGG	5 cut(s)	296, 1154, 1302, 1354, 1708
BssMI	GATC	8 cut(s)	424, 548, 712, 889, 1191, 1370, 1405, 1467
BssNAI	GTATAC	1 cut(s)	52
BssT1I	CCWWGG	1 cut(s)	1708
Bst1107I	GTATAC	1 cut(s)	52
Bst2UI	CCWGG	5 cut(s)	1155, 1304, 1356, 1800, 1839
Bst4CI	ACNGT	9 cut(s)	39, 61, 300, 471, 730, 1219, 1571, 1648, 1890
Bst6I	CTCTTC	4 cut(s)	83, 568, 669, 1626
BstBAI	YACGTR	1 cut(s)	1109
BstC8I	GCNNGC	3 cut(s)	180, 679, 981
BstDEI	CTNAG	4 cut(s)	82, 1188, 1607, 1788
BstDSI	CCRYGG	1 cut(s)	296
BstF5I	GGATG	3 cut(s)	548, 1834, 1879
BstFNI	CGCG	1 cut(s)	1752
BstH2I	RGCGCY	1 cut(s)	1099
BstHHI	GCGC	1 cut(s)	1098
BstKTI	GATC	8 cut(s)	427, 551, 715, 892, 1194, 1373, 1408, 1470
BstMAI	GTCTC	3 cut(s)	965, 1560, 1628
BstMBI	GATC	8 cut(s)	424, 548, 712, 889, 1191, 1370, 1405, 1467
BstMWI	GCNNNNNNNGC	2 cut(s)	53, 525
BstNI	CCWGG	5 cut(s)	1155, 1304, 1356, 1800, 1839
BstNSI	RCATGY	1 cut(s)	1822
BstSCI	CCNGG	5 cut(s)	1153, 1302, 1354, 1798, 1837
BstSFI	CTRYAG	1 cut(s)	726
BstSLI	GKGCMC	1 cut(s)	1464
BstUI	CGCG	1 cut(s)	1752
BstV1I	GCAGC	4 cut(s)	109, 528, 757, 1222
BstV2I	GAAGAC	1 cut(s)	311
BstX2I	RGATCY	2 cut(s)	1191, 1370
BstXI	CCANNNNNNTGG	2 cut(s)	328, 472
BstYI	RGATCY	2 cut(s)	1191, 1370
BstZ17I	GTATAC	1 cut(s)	52
BsuI	GTATCC	1 cut(s)	454
BsuRI	GGCC	4 cut(s)	259, 802, 1462, 1803
BtgI	CCRYGG	1 cut(s)	296
BtsCI	GGATG	3 cut(s)	548, 1834, 1879
BtsI	GCAGTG	2 cut(s)	1062, 1633
BtsIMutI	CAGTG	6 cut(s)	35, 793, 1062, 1452, 1502, 1633
BveI	ACCTGC	1 cut(s)	1317
Cac8I	GCNNGC	3 cut(s)	180, 679, 981
CaiI	CAGNNNCTG	1 cut(s)	734
CfoI	GCGC	1 cut(s)	1098
Cfr10I	RCCGGY	1 cut(s)	199
Cfr13I	GGNCC	4 cut(s)	871, 911, 1460, 1461
CsiI	ACCWGGT	1 cut(s)	1837
Csp6I	GTAC	5 cut(s)	722, 1027, 1083, 1483, 1822
CviAII	CATG	8 cut(s)	405, 643, 1024, 1309, 1409, 1429, 1530, 1819
CviQI	GTAC	5 cut(s)	722, 1027, 1083, 1483, 1822
DdeI	CTNAG	4 cut(s)	82, 1188, 1607, 1788
DpnI	GATC	8 cut(s)	426, 550, 714, 891, 1193, 1372, 1407, 1469
DpnII	GATC	8 cut(s)	424, 548, 712, 889, 1191, 1370, 1405, 1467
EaeI	YGGCCR	2 cut(s)	800, 1801
Eam1104I	CTCTTC	4 cut(s)	83, 568, 669, 1626
EarI	CTCTTC	4 cut(s)	83, 568, 669, 1626
EciI	GGCGGA	2 cut(s)	91, 124
Ecl136II	GAGCTC	1 cut(s)	622
Eco130I	CCWWGG	1 cut(s)	1708
Eco147I	AGGCCT	1 cut(s)	259
Eco24I	GRGCYC	2 cut(s)	624, 1464
Eco47I	GGWCC	2 cut(s)	871, 911
Eco53kI	GAGCTC	1 cut(s)	622
Eco57I	CTGAAG	1 cut(s)	708
Eco88I	CYCGRG	1 cut(s)	1364
EcoICRI	GAGCTC	1 cut(s)	622
EcoO109I	RGGNCCY	1 cut(s)	1461
EcoRI	GAATTC	1 cut(s)	1560
EcoRII	CCWGG	5 cut(s)	1153, 1302, 1354, 1798, 1837
EcoT14I	CCWWGG	1 cut(s)	1708
EcoT22I	ATGCAT	1 cut(s)	385
EcoT38I	GRGCYC	2 cut(s)	624, 1464
ErhI	CCWWGG	1 cut(s)	1708
Esp3I	CGTCTC	1 cut(s)	1628
FaeI	CATG	8 cut(s)	408, 646, 1027, 1312, 1412, 1432, 1533, 1822
FalI	AAGNNNNNCTT	4 cut(s)	831, 863, 1530, 1562
FaqI	GGGAC	1 cut(s)	884
FatI	CATG	8 cut(s)	404, 642, 1023, 1308, 1408, 1428, 1529, 1818
FauI	CCCGC	3 cut(s)	686, 1072, 1140
FauNDI	CATATG	2 cut(s)	522, 610
FbaI	TGATCA	1 cut(s)	712
FblI	GTMKAC	1 cut(s)	51
Fnu4HI	GCNGC	5 cut(s)	123, 517, 771, 800, 1211
FokI	GGATG	3 cut(s)	555, 1841, 1886
FriOI	GRGCYC	2 cut(s)	624, 1464
Fsp4HI	GCNGC	5 cut(s)	123, 517, 771, 800, 1211
FspBI	CTAG	5 cut(s)	708, 851, 968, 1380, 1403
GlaI	GCGC	1 cut(s)	1097
GluI	GCNGC	5 cut(s)	123, 517, 771, 800, 1211
GsuI	CTGGAG	1 cut(s)	1377
HaeII	RGCGCY	1 cut(s)	1099
HaeIII	GGCC	4 cut(s)	259, 802, 1462, 1803
HapII	CCGG	2 cut(s)	114, 200
HhaI	GCGC	1 cut(s)	1098
Hin1II	CATG	8 cut(s)	408, 646, 1027, 1312, 1412, 1432, 1533, 1822
Hin6I	GCGC	1 cut(s)	1096
HinP1I	GCGC	1 cut(s)	1096
HinfI	GANTC	7 cut(s)	73, 238, 596, 1223, 1526, 1740, 1747
HpaII	CCGG	2 cut(s)	114, 200
Hpy166II	GTNNAC	3 cut(s)	52, 222, 935
Hpy188I	TCNGA	2 cut(s)	150, 1610
Hpy8I	GTNNAC	3 cut(s)	52, 222, 935
HpyAV	CCTTC	4 cut(s)	340, 452, 1106, 1550
HpyCH4III	ACNGT	9 cut(s)	39, 61, 300, 471, 730, 1219, 1571, 1648, 1890
HpyCH4IV	ACGT	4 cut(s)	1067, 1108, 1637, 1764
HpyCH4V	TGCA	7 cut(s)	383, 455, 1055, 1060, 1151, 1326, 1696
HpyF10VI	GCNNNNNNNGC	2 cut(s)	53, 525
HpyF3I	CTNAG	4 cut(s)	82, 1188, 1607, 1788
HpySE526I	ACGT	4 cut(s)	1067, 1108, 1637, 1764
Hsp92II	CATG	8 cut(s)	408, 646, 1027, 1312, 1412, 1432, 1533, 1822
HspAI	GCGC	1 cut(s)	1096
Ksp22I	TGATCA	1 cut(s)	712
Kzo9I	GATC	8 cut(s)	424, 548, 712, 889, 1191, 1370, 1405, 1467
LmnI	GCTCC	2 cut(s)	277, 1045
Lsp1109I	GCAGC	4 cut(s)	109, 528, 757, 1222
LweI	GCATC	4 cut(s)	1138, 1497, 1586, 1690
MabI	ACCWGGT	1 cut(s)	1837
MaeI	CTAG	5 cut(s)	708, 851, 968, 1380, 1403
MaeII	ACGT	4 cut(s)	1067, 1108, 1637, 1764
MaeIII	GTNAC	3 cut(s)	364, 374, 1197
MalI	GATC	8 cut(s)	426, 550, 714, 891, 1193, 1372, 1407, 1469
MboI	GATC	8 cut(s)	424, 548, 712, 889, 1191, 1370, 1405, 1467
MboII	GAAGA	7 cut(s)	70, 156, 316, 585, 656, 1463, 1643
MfeI	CAATTG	1 cut(s)	1034
MflI	RGATCY	2 cut(s)	1191, 1370
MhlI	GDGCHC	4 cut(s)	530, 624, 1464, 1608
MlsI	TGGCCA	1 cut(s)	1803
MluCI	AATT	9 cut(s)	230, 786, 821, 972, 1034, 1243, 1454, 1560, 1677
MluNI	TGGCCA	1 cut(s)	1803
MlyI	GAGTC	2 cut(s)	247, 590
MmeI	TCCRAC	5 cut(s)	453, 520, 1023, 1311, 1823
Mox20I	TGGCCA	1 cut(s)	1803
Mph1103I	ATGCAT	1 cut(s)	385
MroXI	GAANNNNTTC	2 cut(s)	330, 1560
MscI	TGGCCA	1 cut(s)	1803
MseI	TTAA	7 cut(s)	411, 653, 885, 1173, 1242, 1292, 1640
MslI	CAYNNNNRTG	2 cut(s)	1321, 1888
Msp20I	TGGCCA	1 cut(s)	1803
MspI	CCGG	2 cut(s)	114, 200
MspR9I	CCNGG	5 cut(s)	1155, 1304, 1356, 1800, 1839
MunI	CAATTG	1 cut(s)	1034
MvaI	CCWGG	5 cut(s)	1155, 1304, 1356, 1800, 1839
MvnI	CGCG	1 cut(s)	1752
MwoI	GCNNNNNNNGC	2 cut(s)	53, 525
NdeI	CATATG	2 cut(s)	522, 610
NdeII	GATC	8 cut(s)	424, 548, 712, 889, 1191, 1370, 1405, 1467
NlaIII	CATG	8 cut(s)	408, 646, 1027, 1312, 1412, 1432, 1533, 1822
NlaIV	GGNNCC	4 cut(s)	872, 1047, 1462, 1463
NmuCI	GTSAC	1 cut(s)	364
NsiI	ATGCAT	1 cut(s)	385
NspI	RCATGY	1 cut(s)	1822
OliI	CACNNNNGTG	2 cut(s)	1321, 1888
PaeR7I	CTCGAG	1 cut(s)	1364
PceI	AGGCCT	1 cut(s)	259
PciI	ACATGT	1 cut(s)	1818
PcsI	WCGNNNNNNNCGW	1 cut(s)	1756
PdmI	GAANNNNTTC	2 cut(s)	330, 1560
PfeI	GAWTC	5 cut(s)	73, 1223, 1526, 1740, 1747
PflMI	CCANNNNNTGG	1 cut(s)	568
PkrI	GCNGC	5 cut(s)	124, 518, 772, 801, 1212
PleI	GAGTC	2 cut(s)	246, 590
PpsI	GAGTC	2 cut(s)	246, 590
Ppu21I	YACGTR	1 cut(s)	1109
PscI	ACATGT	1 cut(s)	1818
Psp124BI	GAGCTC	1 cut(s)	624
Psp6I	CCWGG	5 cut(s)	1153, 1302, 1354, 1798, 1837
PspGI	CCWGG	5 cut(s)	1153, 1302, 1354, 1798, 1837
PspN4I	GGNNCC	4 cut(s)	872, 1047, 1462, 1463
PspOMI	GGGCCC	1 cut(s)	1460
PspPI	GGNCC	4 cut(s)	871, 911, 1460, 1461
PstNI	CAGNNNCTG	1 cut(s)	734
PsuI	RGATCY	2 cut(s)	1191, 1370
RsaI	GTAC	5 cut(s)	723, 1028, 1084, 1484, 1823
RsaNI	GTAC	5 cut(s)	722, 1027, 1083, 1483, 1822
RseI	CAYNNNNRTG	2 cut(s)	1321, 1888
SacI	GAGCTC	1 cut(s)	624
SaqAI	TTAA	7 cut(s)	411, 653, 885, 1173, 1242, 1292, 1640
SatI	GCNGC	5 cut(s)	123, 517, 771, 800, 1211
Sau3AI	GATC	8 cut(s)	424, 548, 712, 889, 1191, 1370, 1405, 1467
Sau96I	GGNCC	4 cut(s)	871, 911, 1460, 1461
ScaI	AGTACT	1 cut(s)	1484
SchI	GAGTC	2 cut(s)	247, 590
ScrFI	CCNGG	5 cut(s)	1155, 1304, 1356, 1800, 1839
SduI	GDGCHC	4 cut(s)	530, 624, 1464, 1608
SexAI	ACCWGGT	1 cut(s)	1837
SfaNI	GCATC	4 cut(s)	1138, 1497, 1586, 1690
SfcI	CTRYAG	1 cut(s)	726
Sfr274I	CTCGAG	1 cut(s)	1364
SinI	GGWCC	2 cut(s)	871, 911
SlaI	CTCGAG	1 cut(s)	1364
SmiMI	CAYNNNNRTG	2 cut(s)	1321, 1888
SmlI	CTYRAG	4 cut(s)	962, 1202, 1364, 1433
SmoI	CTYRAG	4 cut(s)	962, 1202, 1364, 1433
Sse9I	AATT	9 cut(s)	230, 786, 821, 972, 1034, 1243, 1454, 1560, 1677
SseBI	AGGCCT	1 cut(s)	259
SsiI	CCGC	6 cut(s)	102, 135, 679, 799, 1079, 1133
SspI	AATATT	2 cut(s)	781, 1474
SspMI	CTAG	5 cut(s)	708, 851, 968, 1380, 1403
SstI	GAGCTC	1 cut(s)	624
StuI	AGGCCT	1 cut(s)	259
StyD4I	CCNGG	5 cut(s)	1153, 1302, 1354, 1798, 1837
StyI	CCWWGG	1 cut(s)	1708
TaaI	ACNGT	9 cut(s)	39, 61, 300, 471, 730, 1219, 1571, 1648, 1890
TaiI	ACGT	4 cut(s)	1070, 1111, 1640, 1767
TaqI	TCGA	6 cut(s)	21, 29, 241, 251, 1365, 1564
TasI	AATT	9 cut(s)	230, 786, 821, 972, 1034, 1243, 1454, 1560, 1677
TatI	WGTACW	2 cut(s)	1482, 1821
TauI	GCSGC	1 cut(s)	802
TfiI	GAWTC	5 cut(s)	73, 1223, 1526, 1740, 1747
Tru1I	TTAA	7 cut(s)	411, 653, 885, 1173, 1242, 1292, 1640
Tru9I	TTAA	7 cut(s)	411, 653, 885, 1173, 1242, 1292, 1640
TscAI	CASTG	6 cut(s)	42, 800, 1062, 1452, 1509, 1633
TseFI	GTSAC	1 cut(s)	364
TseI	GCWGC	4 cut(s)	122, 516, 770, 1210
Tsp45I	GTSAC	1 cut(s)	364
TspDTI	ATGAA	2 cut(s)	1518, 1677
TspGWI	ACGGA	1 cut(s)	653
TspRI	CASTG	6 cut(s)	42, 800, 1062, 1452, 1509, 1633
Van91I	CCANNNNNTGG	1 cut(s)	568
VpaK11BI	GGWCC	2 cut(s)	871, 911
XapI	RAATTY	4 cut(s)	786, 972, 1454, 1560
XbaI	TCTAGA	1 cut(s)	1402
XceI	RCATGY	1 cut(s)	1822
XhoI	CTCGAG	1 cut(s)	1364
XmiI	GTMKAC	1 cut(s)	51
XmnI	GAANNNNTTC	2 cut(s)	330, 1560
XspI	CTAG	5 cut(s)	708, 851, 968, 1380, 1403
ZrmI	AGTACT	1 cut(s)	1484
Zsp2I	ATGCAT	1 cut(s)	385

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.