Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0009099

Physical Location & Seq

Genomic Coordinates Forward (+)

933865 .. 942193

Gene Structure 8329 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1008500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1893 bp

ATGGCGTGGAAGAATGCGTTCGACAAGGCGAAGCCAGTGTTCGTGACGATATACGCCACCGTAATAATTGGGATCGTCTTCTCGTCTTTGTATGTGATATCCGCCATCTACTCCGGCAAGTCTGCCGCTGATTCCACCACCTCCTGGCTTTCCCATGTAGGTTCTCCTCCTTTAGAGCAAGCACCCAATGTTTCTCAACCAGAAATAGTTCGAGCAATAGCCACACCTTCACTAGGGCCTCAAAGCATGTCAACAAGACCTATTTGGGAAGCTCCCCCACGCACAAAGAAAATGCCACCTTTGAAGAAATTTAGACTGAGCAAAGAACTAGTTCAGCAAAGAGTGAAGGATAACGTTGTTATAGTGACCTTTGGGAACTATGCATTCATGGATTTTATCCTGACTTGGGTTAAACACTTGACTGATCTGGGGCTTTCTAACCTTCTCATTGGTGCAATGGACACCAAACTGTTGGAGGCTTTGTATTGGAAAGGTGTTCCGGTATTTGACATGGGCAGCCACATGAGCACAATAGACGTTGGATGGGGGTCACCAACATTCCACAAGATGGGACGAGAAAAAGTTATACTGATTGACTCAATTCTCCCTTATGGTTTTGAGCTATTGATGTGTGATACAGACATGGTTTGGTTGAAGGACCCGCTTCCGTATCTTGCTCGCTATGCAGAAGCAGATGTCTTAACTTCCAGTGATCAAGTTGTACCAACAGTCACCGATGACAGGCTGGACATTTGGCAACAAGTTGGTGCTGCGTACAACATTGGAATTTTTCACTGGCGGCCAACAGATCCTGCTAAAAGATTGGCTAAGGAATGGAAAGATATGCTTCTAGCTGATGAGAAGATATGGGACCAGAATGGGTTTAATGATATCGTACGAAGACAGTTAGGACCACCAGTTGATGGAGAGAGTGGACTTGTATATGCTTTTGATGGAAGTCTCAAGCTGGGAGTTCTGCCTGCGAGTATATTTTGTAGTGGGCATACATATTTTGTCCAGGCCATGCATCAACAATTGAGATTGGAGCCATATGCAGTGCATACCACATTCCAGTATGCAGGTACCGAAGGAAAACGCCACCGACTACGGGAAGGCATGGTTTTCTATGACCCACCAGAATACTATGATGCACCAGGAGGTTTTTTGTCATTTAAGCCGTCTATTCCTAAGAGCTTGTTGCTAGATGGGGAGCATAATGTTAAATCACATTTTACTCTTATTAATTACCAAATAAAACAAATAAGAACGGCTCTTGCAATTGCTTCTCTGTTGAATCGCACCCTGGTTATGCCTCCACTATGGTGCAGGTTGGATAGGCTGTGGTTTCCCCACCCTGGCGTTCTTGAGGGATCTATCACTCGACAACCTTTTATTTGCCCTCTAGATCATGTGTTTGAGGTGAATGTCATGCTTAAGGAATTGCCAGCGGAGATATTTGGGCCCCCAATCGGTATTAGAGAATACTCATTCTTTGACAATCCATTGATGCCAAAACAGGTGAAAGAATCATGGCTTGATGTCCAGCTTTGTCAACAAGGAACGCGAGACTGCATTGCTTCAAATACTACCACCCCTTCAGGAGCACTCAGATTTCCAAAGAGAAGCAACGAAGAAACGTTCAAGACAGTATTCTCCTCGTTCAAGGATGTAAAAGTAATTCAGTTTTCTTCTATGCAAGATGCATTCCCAGGTTTCACCGACAAGGCAAGGGAAGAGAAATTCAGGAATCGTGCGAAGCGGTATGTTGGTATATGGTGTTGTGTGGCTGAACACACTCCTGGTCACATATACTATGACATGTACTGGGATGAGAAACCCGGTTGGAGACCTATCCCTCCTCAAACCCGTGAGGACGATCACCCACCACCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005975 GO:0005976 GO:0006464 GO:0006486 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009653 GO:0009664 GO:0009832 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010383 GO:0010393 GO:0012505 GO:0016043 GO:0016051 GO:0016740 GO:0016757 GO:0016763 GO:0017144 GO:0019538 GO:0021700 GO:0022622 GO:0030154 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0033692 GO:0034637 GO:0034645 GO:0036211 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044036 GO:0044038 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044267 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045229 GO:0045488 GO:0045489 GO:0048364 GO:0048468 GO:0048469 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0052325 GO:0052546 GO:0052636 GO:0070085 GO:0070589 GO:0070592 GO:0071554 GO:0071555 GO:0071669 GO:0071695 GO:0071704 GO:0071840 GO:0080147 GO:0090558 GO:0090627 GO:0097708 GO:0098791 GO:0099402 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko00514 map00514

Pfam Domains

Protein Families

Nucleotid_trans

Protein Analysis

631

Amino Acids

71.6

Weight (kDa)

7.25

Isoelectric Point (pI)

43.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Nucleotid_trans	PF03407	145 - 369	5.9e-51	Nucleotide-diphospho-sugar transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009099)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35610
fragaria_vesca	FvH4_5g25240 FvH4_5g25240 FvH4_5g25240 FvH4_5g25240
malus_domestica	MD06G1008500.v1.1
prunus_persica	Prupe.5G011600_v2.0.a1 Prupe.5G011600_v2.0.a1 Prupe.5G011600_v2.0.a1 Prupe.5G011600_v2.0.a1 Prupe.5G011600_v2.0.a1
pyrus_communis	pycom16g25860
rosa_chinensis	RchiOBHm_Chr7g0215361
rosa_laevigata	RLG00000002667
rosa_multiflora	Rmu_sc0000355.1_g000013
rosa_roxburghii	Rroxscaffold_3G00244240
rosa_rugosa	Rorug07G0152700
rosa_samantha	Rh7AG289300 Rh7BG281300 Rh7CG309100 Rh7DG292900
rosa_wichuraiana	Rw7G024730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1070, 1317
Acc65I	GGTACC	1 cut(s)	1082
AccB1I	GGYRCC	1 cut(s)	1082
AccB7I	CCANNNNNTGG	3 cut(s)	144, 568, 923
AccII	CGCG	1 cut(s)	1564
AciI	CCGC	6 cut(s)	102, 126, 662, 799, 1448, 1759
AclI	AACGTT	2 cut(s)	354, 1637
AclWI	GGATC	3 cut(s)	80, 803, 1378
AcoI	YGGCCR	1 cut(s)	800
AcsI	RAATTY	3 cut(s)	308, 786, 1739
AcuI	CTGAAG	1 cut(s)	1581
AfaI	GTAC	5 cut(s)	723, 776, 897, 1084, 1823
AfiI	CCNNNNNNNGG	9 cut(s)	144, 233, 406, 568, 741, 923, 1108, 1355, 1469
AflII	CTTAAG	1 cut(s)	1433
AflIII	ACRYGT	1 cut(s)	1818
AgsI	TTSAA	6 cut(s)	304, 655, 1294, 1581, 1642, 1663
AhlI	ACTAGT	1 cut(s)	328
AjnI	CCWGG	7 cut(s)	143, 1017, 1153, 1302, 1354, 1708, 1798
AleI	CACNNNNGTG	1 cut(s)	1321
AluBI	AGCT	6 cut(s)	272, 622, 854, 967, 1194, 1546
AluI	AGCT	6 cut(s)	272, 622, 854, 967, 1194, 1546
Alw21I	GWGCWC	2 cut(s)	530, 1606
Alw26I	GTCTC	3 cut(s)	965, 1560, 1840
AlwI	GGATC	3 cut(s)	80, 803, 1378
AlwNI	CAGNNNCTG	1 cut(s)	812
AoxI	GGCC	4 cut(s)	236, 800, 1020, 1460
ApaI	GGGCCC	1 cut(s)	1464
ApeKI	GCWGC	2 cut(s)	516, 770
ApoI	RAATTY	3 cut(s)	308, 786, 1739
AseI	ATTAAT	1 cut(s)	1242
Asp700I	GAANNNNTTC	3 cut(s)	17, 207, 330
Asp718I	GGTACC	1 cut(s)	1082
AspS9I	GGNCC	6 cut(s)	236, 658, 871, 911, 1460, 1461
AsuC2I	CCSGG	1 cut(s)	1839
AsuHPI	GGTGA	6 cut(s)	543, 724, 1432, 1531, 1708, 1871
AvaII	GGWCC	3 cut(s)	658, 871, 911
BaeGI	GKGCMC	1 cut(s)	1464
BanI	GGYRCC	1 cut(s)	1082
BanII	GRGCYC	1 cut(s)	1464
BbsI	GAAGAC	2 cut(s)	70, 907
Bbv12I	GWGCWC	2 cut(s)	530, 1606
BbvI	GCAGC	2 cut(s)	528, 757
BccI	CCATC	6 cut(s)	113, 537, 562, 917, 947, 1199
BceAI	ACGGC	2 cut(s)	1162, 1284
BciT130I	CCWGG	7 cut(s)	145, 1019, 1155, 1304, 1356, 1710, 1800
BclI	TGATCA	1 cut(s)	712
BcnI	CCSGG	1 cut(s)	1839
BcoDI	GTCTC	3 cut(s)	965, 1560, 1840
BcuI	ACTAGT	1 cut(s)	328
BfaI	CTAG	5 cut(s)	233, 329, 851, 1202, 1403
BfrI	CTTAAG	1 cut(s)	1433
BfuAI	ACCTGC	2 cut(s)	1070, 1317
BisI	GCNGC	4 cut(s)	126, 517, 771, 800
BlsI	GCNGC	4 cut(s)	127, 518, 772, 801
Bme1390I	CCNGG	8 cut(s)	145, 1019, 1155, 1304, 1356, 1710, 1800, 1839
Bme18I	GGWCC	3 cut(s)	658, 871, 911
BmgT120I	GGNCC	6 cut(s)	236, 658, 871, 911, 1460, 1461
BmiI	GGNNCC	6 cut(s)	660, 872, 1047, 1084, 1462, 1463
BmrFI	CCNGG	8 cut(s)	145, 1019, 1155, 1304, 1356, 1710, 1800, 1839
BmrI	ACTGGG	1 cut(s)	1834
BmsI	GCATC	4 cut(s)	1036, 1138, 1497, 1690
BmuI	ACTGGG	1 cut(s)	1834
BpiI	GAAGAC	2 cut(s)	70, 907
Bpu10I	CCTNAGC	1 cut(s)	828
BpuEI	CTTGAG	2 cut(s)	947, 1385
BpuMI	CCSGG	1 cut(s)	1839
BsaI	GGTCTC	1 cut(s)	1840
BsaJI	CCNNGG	3 cut(s)	1302, 1354, 1708
BsaWI	WCCGGW	1 cut(s)	499
BsaXI	ACNNNNNCTCC	2 cut(s)	467, 497
Bsc4I	CCNNNNNNNGG	9 cut(s)	144, 233, 406, 568, 741, 923, 1108, 1355, 1469
Bse1I	ACTGG	6 cut(s)	35, 708, 800, 917, 1072, 1829
Bse3DI	GCAATG	2 cut(s)	462, 1572
BseBI	CCWGG	7 cut(s)	145, 1019, 1155, 1304, 1356, 1710, 1800
BseDI	CCNNGG	3 cut(s)	1302, 1354, 1708
BseGI	GGATG	3 cut(s)	548, 1672, 1834
BseLI	CCNNNNNNNGG	9 cut(s)	144, 233, 406, 568, 741, 923, 1108, 1355, 1469
BseMI	GCAATG	2 cut(s)	462, 1572
BseMII	CTCAG	2 cut(s)	308, 1621
BseNI	ACTGG	6 cut(s)	35, 708, 800, 917, 1072, 1829
BseRI	GAGGAG	3 cut(s)	156, 1645, 1848
BseSI	GKGCMC	1 cut(s)	1464
BseXI	GCAGC	2 cut(s)	528, 757
BseYI	CCCAGC	1 cut(s)	967
BsgI	GTGCAG	1 cut(s)	1345
Bsh1236I	CGCG	1 cut(s)	1564
BshFI	GGCC	4 cut(s)	238, 802, 1022, 1462
BshNI	GGYRCC	1 cut(s)	1082
BsiHKAI	GWGCWC	2 cut(s)	530, 1606
BsiSI	CCGG	3 cut(s)	114, 500, 1839
BsiWI	CGTACG	1 cut(s)	895
BslFI	GGGAC	2 cut(s)	585, 884
BslI	CCNNNNNNNGG	9 cut(s)	144, 233, 406, 568, 741, 923, 1108, 1355, 1469
BsmAI	GTCTC	3 cut(s)	965, 1560, 1840
BsmFI	GGGAC	2 cut(s)	585, 884
BsmI	GAATGC	3 cut(s)	19, 383, 1703
BsnI	GGCC	4 cut(s)	238, 802, 1022, 1462
Bso31I	GGTCTC	1 cut(s)	1840
Bsp120I	GGGCCC	1 cut(s)	1460
Bsp1286I	GDGCHC	3 cut(s)	530, 1464, 1606
Bsp143I	GATC	7 cut(s)	72, 424, 712, 808, 1370, 1405, 1876
BspACI	CCGC	6 cut(s)	102, 126, 662, 799, 1448, 1759
BspANI	GGCC	4 cut(s)	238, 802, 1022, 1462
BspCNI	CTCAG	2 cut(s)	309, 1620
BspFNI	CGCG	1 cut(s)	1564
BspLI	GGNNCC	6 cut(s)	660, 872, 1047, 1084, 1462, 1463
BspMI	ACCTGC	2 cut(s)	1070, 1317
BspPI	GGATC	3 cut(s)	80, 803, 1378
BspT107I	GGYRCC	1 cut(s)	1082
BspTI	CTTAAG	1 cut(s)	1433
BspTNI	GGTCTC	1 cut(s)	1840
BsrDI	GCAATG	2 cut(s)	462, 1572
BsrI	ACTGG	6 cut(s)	35, 708, 800, 917, 1072, 1829
BssECI	CCNNGG	3 cut(s)	1302, 1354, 1708
BssMI	GATC	7 cut(s)	72, 424, 712, 808, 1370, 1405, 1876
Bst2UI	CCWGG	7 cut(s)	145, 1019, 1155, 1304, 1356, 1710, 1800
Bst4CI	ACNGT	6 cut(s)	61, 471, 730, 906, 1648, 1890
Bst6I	CTCTTC	1 cut(s)	1728
BstAFI	CTTAAG	1 cut(s)	1433
BstC8I	GCNNGC	4 cut(s)	180, 679, 981, 1446
BstDEI	CTNAG	4 cut(s)	317, 828, 1188, 1607
BstEII	GGTNACC	1 cut(s)	549
BstENI	CCTNNNNNAGG	1 cut(s)	231
BstF5I	GGATG	3 cut(s)	548, 1672, 1834
BstFNI	CGCG	1 cut(s)	1564
BstKTI	GATC	7 cut(s)	75, 427, 715, 811, 1373, 1408, 1879
BstMAI	GTCTC	3 cut(s)	965, 1560, 1840
BstMBI	GATC	7 cut(s)	72, 424, 712, 808, 1370, 1405, 1876
BstMWI	GCNNNNNNNGC	2 cut(s)	525, 683
BstNI	CCWGG	7 cut(s)	145, 1019, 1155, 1304, 1356, 1710, 1800
BstNSI	RCATGY	2 cut(s)	250, 1822
BstPI	GGTNACC	1 cut(s)	549
BstSCI	CCNGG	8 cut(s)	143, 1017, 1153, 1302, 1354, 1708, 1798, 1837
BstSLI	GKGCMC	1 cut(s)	1464
BstUI	CGCG	1 cut(s)	1564
BstV1I	GCAGC	2 cut(s)	528, 757
BstV2I	GAAGAC	2 cut(s)	70, 907
BstX2I	RGATCY	2 cut(s)	808, 1370
BstXI	CCANNNNNNTGG	1 cut(s)	472
BstYI	RGATCY	2 cut(s)	808, 1370
BsuRI	GGCC	4 cut(s)	238, 802, 1022, 1462
BtsCI	GGATG	3 cut(s)	548, 1672, 1834
BtsI	GCAGTG	1 cut(s)	1062
BtsIMutI	CAGTG	4 cut(s)	42, 715, 793, 1062
BveI	ACCTGC	2 cut(s)	1070, 1317
Cac8I	GCNNGC	4 cut(s)	180, 679, 981, 1446
CaiI	CAGNNNCTG	1 cut(s)	812
Cfr13I	GGNCC	6 cut(s)	236, 658, 871, 911, 1460, 1461
Csp6I	GTAC	5 cut(s)	722, 775, 896, 1083, 1822
CviQI	GTAC	5 cut(s)	722, 775, 896, 1083, 1822
DdeI	CTNAG	4 cut(s)	317, 828, 1188, 1607
DpnI	GATC	7 cut(s)	74, 426, 714, 810, 1372, 1407, 1878
DpnII	GATC	7 cut(s)	72, 424, 712, 808, 1370, 1405, 1876
EaeI	YGGCCR	1 cut(s)	800
Eam1104I	CTCTTC	1 cut(s)	1728
EarI	CTCTTC	1 cut(s)	1728
EciI	GGCGGA	1 cut(s)	91
Eco24I	GRGCYC	1 cut(s)	1464
Eco31I	GGTCTC	1 cut(s)	1840
Eco32I	GATATC	2 cut(s)	99, 892
Eco47I	GGWCC	3 cut(s)	658, 871, 911
Eco57I	CTGAAG	1 cut(s)	1581
Eco91I	GGTNACC	1 cut(s)	549
EcoNI	CCTNNNNNAGG	1 cut(s)	231
EcoO109I	RGGNCCY	3 cut(s)	236, 658, 1461
EcoO65I	GGTNACC	1 cut(s)	549
EcoRII	CCWGG	7 cut(s)	143, 1017, 1153, 1302, 1354, 1708, 1798
EcoRV	GATATC	2 cut(s)	99, 892
EcoT22I	ATGCAT	3 cut(s)	385, 1029, 1705
EcoT38I	GRGCYC	1 cut(s)	1464
FalI	AAGNNNNNCTT	2 cut(s)	831, 863
FaqI	GGGAC	2 cut(s)	585, 884
FauI	CCCGC	1 cut(s)	669
FauNDI	CATATG	1 cut(s)	1051
FbaI	TGATCA	1 cut(s)	712
Fnu4HI	GCNGC	4 cut(s)	126, 517, 771, 800
FokI	GGATG	3 cut(s)	555, 1679, 1841
FriOI	GRGCYC	1 cut(s)	1464
Fsp4HI	GCNGC	4 cut(s)	126, 517, 771, 800
FspBI	CTAG	5 cut(s)	233, 329, 851, 1202, 1403
GluI	GCNGC	4 cut(s)	126, 517, 771, 800
GsaI	CCCAGC	1 cut(s)	971
HaeIII	GGCC	4 cut(s)	238, 802, 1022, 1462
HapII	CCGG	3 cut(s)	114, 500, 1839
HincII	GTYRAC	2 cut(s)	252, 1553
HindII	GTYRAC	2 cut(s)	252, 1553
HinfI	GANTC	5 cut(s)	131, 596, 1294, 1526, 1747
HpaII	CCGG	3 cut(s)	114, 500, 1839
HphI	GGTGA	6 cut(s)	543, 724, 1432, 1531, 1708, 1871
Hpy166II	GTNNAC	3 cut(s)	252, 935, 1553
Hpy188I	TCNGA	1 cut(s)	1610
Hpy188III	TCNNGA	7 cut(s)	43, 400, 1364, 1403, 1599, 1642, 1744
Hpy8I	GTNNAC	3 cut(s)	252, 935, 1553
HpyAV	CCTTC	7 cut(s)	237, 340, 452, 649, 1082, 1106, 1605
HpyCH4III	ACNGT	6 cut(s)	61, 471, 730, 906, 1648, 1890
HpyCH4IV	ACGT	3 cut(s)	354, 537, 1637
HpyF10VI	GCNNNNNNNGC	2 cut(s)	525, 683
HpyF3I	CTNAG	4 cut(s)	317, 828, 1188, 1607
HpySE526I	ACGT	3 cut(s)	354, 537, 1637
KpnI	GGTACC	1 cut(s)	1086
Ksp22I	TGATCA	1 cut(s)	712
Kzo9I	GATC	7 cut(s)	72, 424, 712, 808, 1370, 1405, 1876
LmnI	GCTCC	4 cut(s)	277, 1045, 1210, 1601
Lsp1109I	GCAGC	2 cut(s)	528, 757
LweI	GCATC	4 cut(s)	1036, 1138, 1497, 1690
MaeI	CTAG	5 cut(s)	233, 329, 851, 1202, 1403
MaeII	ACGT	3 cut(s)	354, 537, 1637
MaeIII	GTNAC	5 cut(s)	43, 364, 549, 730, 1802
MalI	GATC	7 cut(s)	74, 426, 714, 810, 1372, 1407, 1878
MboI	GATC	7 cut(s)	72, 424, 712, 808, 1370, 1405, 1876
MboII	GAAGA	8 cut(s)	22, 70, 316, 874, 912, 1643, 1680, 1745
MfeI	CAATTG	2 cut(s)	1034, 1278
MflI	RGATCY	2 cut(s)	808, 1370
MhlI	GDGCHC	3 cut(s)	530, 1464, 1606
MlyI	GAGTC	1 cut(s)	590
MmeI	TCCRAC	4 cut(s)	453, 520, 1311, 1823
Mph1103I	ATGCAT	3 cut(s)	385, 1029, 1705
MroXI	GAANNNNTTC	3 cut(s)	17, 207, 330
MseI	TTAA	7 cut(s)	411, 701, 885, 1173, 1221, 1242, 1434
MslI	CAYNNNNRTG	1 cut(s)	1321
MspA1I	CMGCKG	2 cut(s)	128, 1448
MspCI	CTTAAG	1 cut(s)	1433
MspI	CCGG	3 cut(s)	114, 500, 1839
MspR9I	CCNGG	8 cut(s)	145, 1019, 1155, 1304, 1356, 1710, 1800, 1839
MunI	CAATTG	2 cut(s)	1034, 1278
Mva1269I	GAATGC	3 cut(s)	19, 383, 1703
MvaI	CCWGG	7 cut(s)	145, 1019, 1155, 1304, 1356, 1710, 1800
MvnI	CGCG	1 cut(s)	1564
MwoI	GCNNNNNNNGC	2 cut(s)	525, 683
NciI	CCSGG	1 cut(s)	1839
NdeI	CATATG	1 cut(s)	1051
NdeII	GATC	7 cut(s)	72, 424, 712, 808, 1370, 1405, 1876
NlaIV	GGNNCC	6 cut(s)	660, 872, 1047, 1084, 1462, 1463
NmuCI	GTSAC	5 cut(s)	43, 364, 549, 730, 1802
NsiI	ATGCAT	3 cut(s)	385, 1029, 1705
NspI	RCATGY	2 cut(s)	250, 1822
OliI	CACNNNNGTG	1 cut(s)	1321
PciI	ACATGT	1 cut(s)	1818
PctI	GAATGC	3 cut(s)	19, 383, 1703
PdmI	GAANNNNTTC	3 cut(s)	17, 207, 330
PfeI	GAWTC	4 cut(s)	131, 1294, 1526, 1747
Pfl23II	CGTACG	1 cut(s)	895
PflMI	CCANNNNNTGG	3 cut(s)	144, 568, 923
PkrI	GCNGC	4 cut(s)	127, 518, 772, 801
PleI	GAGTC	1 cut(s)	590
PpsI	GAGTC	1 cut(s)	590
PpuMI	RGGWCCY	1 cut(s)	658
PscI	ACATGT	1 cut(s)	1818
PshBI	ATTAAT	1 cut(s)	1242
Psp1406I	AACGTT	2 cut(s)	354, 1637
Psp5II	RGGWCCY	1 cut(s)	658
Psp6I	CCWGG	7 cut(s)	143, 1017, 1153, 1302, 1354, 1708, 1798
PspEI	GGTNACC	1 cut(s)	549
PspFI	CCCAGC	1 cut(s)	967
PspGI	CCWGG	7 cut(s)	143, 1017, 1153, 1302, 1354, 1708, 1798
PspLI	CGTACG	1 cut(s)	895
PspN4I	GGNNCC	6 cut(s)	660, 872, 1047, 1084, 1462, 1463
PspOMI	GGGCCC	1 cut(s)	1460
PspPI	GGNCC	6 cut(s)	236, 658, 871, 911, 1460, 1461
PspPPI	RGGWCCY	1 cut(s)	658
PstNI	CAGNNNCTG	1 cut(s)	812
PsuI	RGATCY	2 cut(s)	808, 1370
RsaI	GTAC	5 cut(s)	723, 776, 897, 1084, 1823
RsaNI	GTAC	5 cut(s)	722, 775, 896, 1083, 1822
RseI	CAYNNNNRTG	1 cut(s)	1321
SaqAI	TTAA	7 cut(s)	411, 701, 885, 1173, 1221, 1242, 1434
SatI	GCNGC	4 cut(s)	126, 517, 771, 800
Sau3AI	GATC	7 cut(s)	72, 424, 712, 808, 1370, 1405, 1876
Sau96I	GGNCC	6 cut(s)	236, 658, 871, 911, 1460, 1461
SchI	GAGTC	1 cut(s)	590
ScrFI	CCNGG	8 cut(s)	145, 1019, 1155, 1304, 1356, 1710, 1800, 1839
SduI	GDGCHC	3 cut(s)	530, 1464, 1606
SfaNI	GCATC	4 cut(s)	1036, 1138, 1497, 1690
SinI	GGWCC	3 cut(s)	658, 871, 911
SmiMI	CAYNNNNRTG	1 cut(s)	1321
SmlI	CTYRAG	3 cut(s)	962, 1364, 1433
SmoI	CTYRAG	3 cut(s)	962, 1364, 1433
SpeI	ACTAGT	1 cut(s)	328
SsiI	CCGC	6 cut(s)	102, 126, 662, 799, 1448, 1759
SspMI	CTAG	5 cut(s)	233, 329, 851, 1202, 1403
StyD4I	CCNGG	8 cut(s)	143, 1017, 1153, 1302, 1354, 1708, 1798, 1837
TaaI	ACNGT	6 cut(s)	61, 471, 730, 906, 1648, 1890
TaiI	ACGT	3 cut(s)	357, 540, 1640
TaqI	TCGA	3 cut(s)	21, 211, 1381
TatI	WGTACW	1 cut(s)	1821
TauI	GCSGC	2 cut(s)	128, 802
TfiI	GAWTC	4 cut(s)	131, 1294, 1526, 1747
Tru1I	TTAA	7 cut(s)	411, 701, 885, 1173, 1221, 1242, 1434
Tru9I	TTAA	7 cut(s)	411, 701, 885, 1173, 1221, 1242, 1434
TscAI	CASTG	4 cut(s)	42, 715, 800, 1062
TseFI	GTSAC	5 cut(s)	43, 364, 549, 730, 1802
TseI	GCWGC	2 cut(s)	516, 770
Tsp45I	GTSAC	5 cut(s)	43, 364, 549, 730, 1802
TspDTI	ATGAA	1 cut(s)	376
TspGWI	ACGGA	1 cut(s)	657
TspRI	CASTG	4 cut(s)	42, 715, 800, 1062
Van91I	CCANNNNNTGG	3 cut(s)	144, 568, 923
Vha464I	CTTAAG	1 cut(s)	1433
VpaK11BI	GGWCC	3 cut(s)	658, 871, 911
VspI	ATTAAT	1 cut(s)	1242
XagI	CCTNNNNNAGG	1 cut(s)	231
XapI	RAATTY	3 cut(s)	308, 786, 1739
XbaI	TCTAGA	1 cut(s)	1402
XceI	RCATGY	2 cut(s)	250, 1822
XmnI	GAANNNNTTC	3 cut(s)	17, 207, 330
XspI	CTAG	5 cut(s)	233, 329, 851, 1202, 1403
Zsp2I	ATGCAT	3 cut(s)	385, 1029, 1705

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.