Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0016870

Physical Location & Seq

Genomic Coordinates Forward (+)

3711529 .. 3714648

Gene Structure 3120 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g06351.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1188 bp

ATGACTATCTCACCTCCTCCTCCTCCTACTAATTTTGATCCCCTCAATCTCGGCCCCGAATCCCTCGCCCCACCCAAACCCGCCTCCGAATCCCAACCCGACCCGACCCTCACACTACCCGCATCCCCAGCCCTAAACCCGACCCTCCTCCACCTCGCCTTCAGCCACGACCACACCTGCTTCTCCGTCGCCACCACCTCCGGCTTCCGCGGCTACTCCTGCGACCCCTTCCGCCGCTGCGACTGCGACCCCTCCGGCCCGCGCGGCGGCGTCCGATTCGTCCAGATGCTCTTCCACTGCCACTACTTCGCCGTCCTCGGCGGCGGACCCGACCCGTTCTGCCCTAGCAACAAGCTCATGATCTGGAACGACCGCCAGGCCCGCTGCGTCGGCGAGATAACTTTCCGGTCTGATGTCAAATCCATCAGGCTCCGCCAGGGCCGGATGGTCGTCATTCTCCTCAACAAGATCATCGTCTACAATTTCGCCGATTTGCAGCCGTTGGATACGATGATGACGTTGGACAACCCTAAGGGACTGTGTGAGGTGTCGCAGAAGTCCGGTCCGGCGGTGCTGGCGTGTCCGGGGCTCCACCAGGGGCAAATTCGGGTCCATAATTACAGGTCGAACCGGACCAAGTTTATAACGGCGCATAGCTCCAGTCTGGCGTGCTTTGCTCTCACACTGGATGGTCAGTTTCTAGCTACGGCGAGCTGTAAAGGGACTCTGATTAGAGTTTTTAACACTTTGGATGGTACATTGCTCCAAGAGGTGAGGAGAGGAGCAGAAAAGGCAGAGATTTACAGTCTTGCCTTCTCTTCCAATGCCCAATGGCTAGCTGCCTCGAGCGACAAGGGTACCGTCCATGTTTTCTGTGTAAAGGTTGACGCAGGATCTTTGGGAAGTGATGGATCACACAGCACATCAGAGATCAGTCGTTCTAATACATCAGCAATTTCATCTCTCTCCTACTTCAAAGCTGTCCTTCCAAGATATTTCAGCTCAGAATGGTCAGTGGCCAGATTTCGGTTGCAGGAAGGTGTAAAGTACATTGTTGCCTTTGGCCACCAGAAGAACACTGTTATCATTGTTGGCATGGATGGGAGCTTCTATCGATGTCAATTTGACCCTGAAAATGGAGGAGAAATGACTCAGCTTGAGTATTCCAACTTCCTGAAATCGGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000045 GO:0000407 GO:0000422 GO:0003674 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006497 GO:0006807 GO:0006914 GO:0006996 GO:0007005 GO:0007033 GO:0008104 GO:0008150 GO:0008152 GO:0008289 GO:0009056 GO:0009058 GO:0009059 GO:0009987 GO:0016020 GO:0016043 GO:0016236 GO:0019538 GO:0019898 GO:0022411 GO:0022607 GO:0032266 GO:0033036 GO:0034045 GO:0034497 GO:0034613 GO:0034645 GO:0035091 GO:0036211 GO:0042157 GO:0042158 GO:0043167 GO:0043168 GO:0043170 GO:0043412 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0044804 GO:0051179 GO:0051641 GO:0061726 GO:0061919 GO:0070727 GO:0070925 GO:0071704 GO:0071840 GO:0080025 GO:0098805 GO:1901564 GO:1901566 GO:1901576 GO:1901981 GO:1902936 GO:1903008 GO:1905037

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

396

Amino Acids

43.29

Weight (kDa)

8.38

Isoelectric Point (pI)

42.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PROPPIN	PF21032	53 - 297	7.6e-29	PROPPIN
Beta-prop_THOC3	PF25174	118 - 294	6.8e-12	THOC3 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	151 - 294	7.9e-08	WDR3 first beta-propeller domain
Beta-prop_EML_2	PF23414	198 - 301	1.1e-06	Echinoderm microtubule-associated protein second beta-propeller
WD40_Prp19	PF24814	204 - 291	9.3e-07	Prp19 WD40 domain
Beta-prop_WDR5	PF25175	216 - 294	1.3e-07	WDR5 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0016870)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g06351 FvH4_6g06351
rosa_chinensis	RchiOBHm_Chr3g0455451
rosa_laevigata	RLG00000025361
rosa_multiflora	Rmu_sc0003728.1_g000002
rosa_roxburghii	Rroxscaffold_2G00110450 Rroxscaffold_6G00424270
rosa_rugosa	Rorug03G0007700 Rorug03G0007700
rosa_samantha	Rh3AG067100 Rh3BG069400 Rh3CG067900 Rh3DG069400
rosa_wichuraiana	Rw3G005300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	644
AarI	CACCTGC	1 cut(s)	185
Acc36I	ACCTGC	1 cut(s)	185
Acc65I	GGTACC	1 cut(s)	857
AccB1I	GGYRCC	1 cut(s)	857
AccI	GTMKAC	1 cut(s)	477
AccII	CGCG	3 cut(s)	210, 262, 264
AclWI	GGATC	3 cut(s)	32, 901, 919
AcoI	YGGCCR	2 cut(s)	1017, 1063
AcsI	RAATTY	1 cut(s)	603
AcuI	CTGAAG	1 cut(s)	145
AcyI	GRCGYC	1 cut(s)	270
AfaI	GTAC	3 cut(s)	757, 859, 1049
AfiI	CCNNNNNNNGG	4 cut(s)	266, 1026, 1136, 1180
AgsI	TTSAA	1 cut(s)	976
AjnI	CCWGG	3 cut(s)	375, 435, 594
AluBI	AGCT	9 cut(s)	355, 657, 704, 714, 839, 980, 1002, 1107, 1156
AluI	AGCT	9 cut(s)	355, 657, 704, 714, 839, 980, 1002, 1107, 1156
AlwI	GGATC	3 cut(s)	32, 901, 919
Ama87I	CYCGRG	1 cut(s)	844
AoxI	GGCC	6 cut(s)	52, 256, 378, 439, 1017, 1063
ApeKI	GCWGC	4 cut(s)	237, 384, 496, 839
ApoI	RAATTY	1 cut(s)	603
Asp718I	GGTACC	1 cut(s)	857
AspLEI	GCGC	2 cut(s)	264, 652
AspS9I	GGNCC	8 cut(s)	53, 257, 326, 379, 439, 563, 610, 633
AsuC2I	CCSGG	1 cut(s)	585
AsuHPI	GGTGA	2 cut(s)	3, 784
AsuNHI	GCTAGC	1 cut(s)	835
AvaI	CYCGRG	1 cut(s)	844
AvaII	GGWCC	4 cut(s)	326, 563, 610, 633
AxyI	CCTNAGG	1 cut(s)	531
BaeI	ACNNNNGTAYC	2 cut(s)	841, 874
BalI	TGGCCA	2 cut(s)	1019, 1065
BanI	GGYRCC	1 cut(s)	857
BanII	GRGCYC	1 cut(s)	591
BarI	GAAGNNNNNNTAC	2 cut(s)	1154, 1186
BbvI	GCAGC	4 cut(s)	224, 371, 508, 826
BccI	CCATC	6 cut(s)	431, 439, 683, 746, 902, 1094
BceAI	ACGGC	4 cut(s)	296, 484, 663, 723
BciT130I	CCWGG	3 cut(s)	377, 437, 596
BciVI	GTATCC	1 cut(s)	499
BcnI	CCSGG	1 cut(s)	585
BfaI	CTAG	3 cut(s)	345, 701, 836
BfuAI	ACCTGC	1 cut(s)	185
BfuI	GTATCC	1 cut(s)	499
BglI	GCCNNNNNGGC	1 cut(s)	264
BisI	GCNGC	9 cut(s)	211, 235, 238, 265, 268, 322, 385, 497, 840
BlsI	GCNGC	9 cut(s)	212, 236, 239, 266, 269, 323, 386, 498, 841
Bme1390I	CCNGG	4 cut(s)	377, 437, 585, 596
Bme18I	GGWCC	4 cut(s)	326, 563, 610, 633
BmeT110I	CYCGRG	1 cut(s)	844
BmgT120I	GGNCC	8 cut(s)	53, 257, 326, 379, 439, 563, 610, 633
BmiI	GGNNCC	6 cut(s)	55, 328, 431, 590, 611, 859
BmrFI	CCNGG	4 cut(s)	377, 437, 585, 596
BmsI	GCATC	2 cut(s)	131, 276
BmtI	GCTAGC	1 cut(s)	839
BpmI	CTGGAG	1 cut(s)	643
BpuEI	CTTGAG	1 cut(s)	1178
BpuMI	CCSGG	1 cut(s)	585
Bsa29I	ATCGAT	1 cut(s)	1114
BsaHI	GRCGYC	1 cut(s)	270
BsaJI	CCNNGG	5 cut(s)	208, 316, 436, 584, 595
BsaWI	WCCGGW	3 cut(s)	405, 560, 630
Bsc4I	CCNNNNNNNGG	4 cut(s)	266, 1026, 1136, 1180
Bse1I	ACTGG	2 cut(s)	660, 690
Bse21I	CCTNAGG	1 cut(s)	531
Bse3DI	GCAATG	1 cut(s)	758
BseBI	CCWGG	3 cut(s)	377, 437, 596
BseCI	ATCGAT	1 cut(s)	1114
BseDI	CCNNGG	5 cut(s)	208, 316, 436, 584, 595
BseGI	GGATG	5 cut(s)	122, 450, 694, 757, 1105
BseLI	CCNNNNNNNGG	4 cut(s)	266, 1026, 1136, 1180
BseMI	GCAATG	1 cut(s)	758
BseMII	CTCAG	2 cut(s)	1017, 1166
BseNI	ACTGG	2 cut(s)	660, 690
BseRI	GAGGAG	8 cut(s)	6, 9, 12, 137, 449, 790, 795, 1155
BseXI	GCAGC	4 cut(s)	224, 371, 508, 826
BseYI	CCCAGC	1 cut(s)	127
Bsh1236I	CGCG	3 cut(s)	210, 262, 264
Bsh1285I	CGRYCG	1 cut(s)	373
BshFI	GGCC	6 cut(s)	54, 258, 380, 441, 1019, 1065
BshNI	GGYRCC	1 cut(s)	857
BshVI	ATCGAT	1 cut(s)	1114
BsiEI	CGRYCG	1 cut(s)	373
BsiHKCI	CYCGRG	1 cut(s)	844
BsiSI	CCGG	8 cut(s)	201, 255, 406, 442, 561, 566, 584, 631
BslFI	GGGAC	2 cut(s)	549, 736
BslI	CCNNNNNNNGG	4 cut(s)	266, 1026, 1136, 1180
BsmFI	GGGAC	2 cut(s)	549, 736
BsnI	GGCC	6 cut(s)	54, 258, 380, 441, 1019, 1065
BsoBI	CYCGRG	1 cut(s)	844
Bsp1286I	GDGCHC	1 cut(s)	591
Bsp143I	GATC	6 cut(s)	37, 360, 468, 893, 911, 930
BspANI	GGCC	6 cut(s)	54, 258, 380, 441, 1019, 1065
BspCNI	CTCAG	2 cut(s)	1016, 1165
BspDI	ATCGAT	1 cut(s)	1114
BspFNI	CGCG	3 cut(s)	210, 262, 264
BspHI	TCATGA	1 cut(s)	357
BspLI	GGNNCC	6 cut(s)	55, 328, 431, 590, 611, 859
BspMI	ACCTGC	1 cut(s)	185
BspOI	GCTAGC	1 cut(s)	839
BspPI	GGATC	3 cut(s)	32, 901, 919
BspQI	GCTCTTC	1 cut(s)	296
BspT107I	GGYRCC	1 cut(s)	857
BsrDI	GCAATG	1 cut(s)	758
BsrI	ACTGG	2 cut(s)	660, 690
BssECI	CCNNGG	5 cut(s)	208, 316, 436, 584, 595
BssMI	GATC	6 cut(s)	37, 360, 468, 893, 911, 930
BssNI	GRCGYC	1 cut(s)	270
Bst2UI	CCWGG	3 cut(s)	377, 437, 596
Bst4CI	ACNGT	4 cut(s)	540, 806, 862, 1081
Bst6I	CTCTTC	2 cut(s)	296, 823
BstACI	GRCGYC	1 cut(s)	270
BstC8I	GCNNGC	6 cut(s)	260, 382, 576, 670, 712, 837
BstDEI	CTNAG	3 cut(s)	531, 1003, 1152
BstDSI	CCRYGG	1 cut(s)	208
BstF5I	GGATG	5 cut(s)	122, 450, 694, 757, 1105
BstFNI	CGCG	3 cut(s)	210, 262, 264
BstHHI	GCGC	2 cut(s)	264, 652
BstKTI	GATC	6 cut(s)	40, 363, 471, 896, 914, 933
BstMBI	GATC	6 cut(s)	37, 360, 468, 893, 911, 930
BstMCI	CGRYCG	1 cut(s)	373
BstNI	CCWGG	3 cut(s)	377, 437, 596
BstSCI	CCNGG	4 cut(s)	375, 435, 583, 594
BstUI	CGCG	3 cut(s)	210, 262, 264
BstV1I	GCAGC	4 cut(s)	224, 371, 508, 826
BstX2I	RGATCY	1 cut(s)	893
BstYI	RGATCY	1 cut(s)	893
Bsu15I	ATCGAT	1 cut(s)	1114
Bsu36I	CCTNAGG	1 cut(s)	531
BsuI	GTATCC	1 cut(s)	499
BsuRI	GGCC	6 cut(s)	54, 258, 380, 441, 1019, 1065
BsuTUI	ATCGAT	1 cut(s)	1114
BtgI	CCRYGG	1 cut(s)	208
BtsCI	GGATG	5 cut(s)	122, 450, 694, 757, 1105
BtsI	GCAGTG	1 cut(s)	295
BtsIMutI	CAGTG	4 cut(s)	295, 683, 1020, 1077
BveI	ACCTGC	1 cut(s)	185
Cac8I	GCNNGC	6 cut(s)	260, 382, 576, 670, 712, 837
CciI	TCATGA	1 cut(s)	357
CfoI	GCGC	2 cut(s)	264, 652
Cfr13I	GGNCC	8 cut(s)	53, 257, 326, 379, 439, 563, 610, 633
Cfr42I	CCGCGG	1 cut(s)	211
ClaI	ATCGAT	1 cut(s)	1114
CpoI	CGGWCCG	1 cut(s)	563
CseI	GACGC	3 cut(s)	259, 376, 896
Csp6I	GTAC	3 cut(s)	756, 858, 1048
CspI	CGGWCCG	1 cut(s)	563
CviAII	CATG	3 cut(s)	358, 866, 1096
CviQI	GTAC	3 cut(s)	756, 858, 1048
DdeI	CTNAG	3 cut(s)	531, 1003, 1152
DpnI	GATC	6 cut(s)	39, 362, 470, 895, 913, 932
DpnII	GATC	6 cut(s)	37, 360, 468, 893, 911, 930
EaeI	YGGCCR	2 cut(s)	1017, 1063
Eam1104I	CTCTTC	2 cut(s)	296, 823
EarI	CTCTTC	2 cut(s)	296, 823
EciI	GGCGGA	3 cut(s)	221, 339, 422
Eco24I	GRGCYC	1 cut(s)	591
Eco47I	GGWCC	4 cut(s)	326, 563, 610, 633
Eco57I	CTGAAG	1 cut(s)	145
Eco81I	CCTNAGG	1 cut(s)	531
Eco88I	CYCGRG	1 cut(s)	844
EcoRII	CCWGG	3 cut(s)	375, 435, 594
EcoT38I	GRGCYC	1 cut(s)	591
FaeI	CATG	3 cut(s)	361, 869, 1099
FaiI	YATR	6 cut(s)	359, 615, 644, 654, 867, 1097
FalI	AAGNNNNNCTT	2 cut(s)	969, 1001
FaqI	GGGAC	2 cut(s)	549, 736
FatI	CATG	3 cut(s)	357, 865, 1095
FauI	CCCGC	4 cut(s)	88, 127, 267, 389
FblI	GTMKAC	1 cut(s)	477
Fnu4HI	GCNGC	9 cut(s)	211, 235, 238, 265, 268, 322, 385, 497, 840
FokI	GGATG	5 cut(s)	109, 457, 701, 764, 1112
FriOI	GRGCYC	1 cut(s)	591
Fsp4HI	GCNGC	9 cut(s)	211, 235, 238, 265, 268, 322, 385, 497, 840
FspBI	CTAG	3 cut(s)	345, 701, 836
GlaI	GCGC	2 cut(s)	263, 651
GluI	GCNGC	9 cut(s)	211, 235, 238, 265, 268, 322, 385, 497, 840
GsaI	CCCAGC	1 cut(s)	131
GsuI	CTGGAG	1 cut(s)	643
HaeIII	GGCC	6 cut(s)	54, 258, 380, 441, 1019, 1065
HapII	CCGG	8 cut(s)	201, 255, 406, 442, 561, 566, 584, 631
HgaI	GACGC	3 cut(s)	259, 376, 896
HhaI	GCGC	2 cut(s)	264, 652
Hin1I	GRCGYC	1 cut(s)	270
Hin1II	CATG	3 cut(s)	361, 869, 1099
Hin6I	GCGC	2 cut(s)	262, 650
HinP1I	GCGC	2 cut(s)	262, 650
HincII	GTYRAC	1 cut(s)	886
HindII	GTYRAC	1 cut(s)	886
HinfI	GANTC	5 cut(s)	59, 89, 276, 724, 1150
HpaII	CCGG	8 cut(s)	201, 255, 406, 442, 561, 566, 584, 631
HphI	GGTGA	2 cut(s)	3, 784
Hpy166II	GTNNAC	2 cut(s)	478, 886
Hpy188I	TCNGA	7 cut(s)	88, 275, 412, 729, 928, 1006, 1183
Hpy188III	TCNNGA	4 cut(s)	283, 358, 364, 1174
Hpy8I	GTNNAC	2 cut(s)	478, 886
Hpy99I	CGWCG	2 cut(s)	191, 392
HpyAV	CCTTC	5 cut(s)	169, 238, 823, 995, 1031
HpyCH4III	ACNGT	4 cut(s)	540, 806, 862, 1081
HpyCH4IV	ACGT	1 cut(s)	518
HpyCH4V	TGCA	2 cut(s)	496, 1033
HpyF3I	CTNAG	3 cut(s)	531, 1003, 1152
HpySE526I	ACGT	1 cut(s)	518
Hsp92I	GRCGYC	1 cut(s)	270
Hsp92II	CATG	3 cut(s)	361, 869, 1099
HspAI	GCGC	2 cut(s)	262, 650
KpnI	GGTACC	1 cut(s)	861
KspI	CCGCGG	1 cut(s)	211
Kzo9I	GATC	6 cut(s)	37, 360, 468, 893, 911, 930
LguI	GCTCTTC	1 cut(s)	296
LmnI	GCTCC	6 cut(s)	435, 594, 662, 768, 782, 1104
Lsp1109I	GCAGC	4 cut(s)	224, 371, 508, 826
LweI	GCATC	2 cut(s)	131, 276
MaeI	CTAG	3 cut(s)	345, 701, 836
MaeII	ACGT	1 cut(s)	518
MalI	GATC	6 cut(s)	39, 362, 470, 895, 913, 932
MboI	GATC	6 cut(s)	37, 360, 468, 893, 911, 930
MboII	GAAGA	3 cut(s)	283, 810, 1084
MflI	RGATCY	1 cut(s)	893
MhlI	GDGCHC	1 cut(s)	591
MlsI	TGGCCA	2 cut(s)	1019, 1065
MluCI	AATT	6 cut(s)	31, 481, 603, 616, 954, 1121
MluNI	TGGCCA	2 cut(s)	1019, 1065
MlyI	GAGTC	2 cut(s)	718, 1144
MmeI	TCCRAC	2 cut(s)	483, 501
Mox20I	TGGCCA	2 cut(s)	1019, 1065
MscI	TGGCCA	2 cut(s)	1019, 1065
MseI	TTAA	1 cut(s)	741
Msp20I	TGGCCA	2 cut(s)	1019, 1065
MspA1I	CMGCKG	3 cut(s)	210, 237, 384
MspI	CCGG	8 cut(s)	201, 255, 406, 442, 561, 566, 584, 631
MspR9I	CCNGG	4 cut(s)	377, 437, 585, 596
MvaI	CCWGG	3 cut(s)	377, 437, 596
MvnI	CGCG	3 cut(s)	210, 262, 264
NciI	CCSGG	1 cut(s)	585
NdeII	GATC	6 cut(s)	37, 360, 468, 893, 911, 930
NheI	GCTAGC	1 cut(s)	835
NlaIII	CATG	3 cut(s)	361, 869, 1099
NlaIV	GGNNCC	6 cut(s)	55, 328, 431, 590, 611, 859
NmeAIII	GCCGAG	2 cut(s)	30, 297
PaeR7I	CTCGAG	1 cut(s)	844
PagI	TCATGA	1 cut(s)	357
PaqCI	CACCTGC	1 cut(s)	185
PciSI	GCTCTTC	1 cut(s)	296
PcsI	WCGNNNNNNNCGW	1 cut(s)	515
PfeI	GAWTC	3 cut(s)	59, 89, 276
PkrI	GCNGC	9 cut(s)	212, 236, 239, 266, 269, 323, 386, 498, 841
PleI	GAGTC	2 cut(s)	718, 1144
PpsI	GAGTC	2 cut(s)	718, 1144
PsiI	TTATAA	1 cut(s)	644
Psp6I	CCWGG	3 cut(s)	375, 435, 594
PspFI	CCCAGC	1 cut(s)	127
PspGI	CCWGG	3 cut(s)	375, 435, 594
PspN4I	GGNNCC	6 cut(s)	55, 328, 431, 590, 611, 859
PspPI	GGNCC	8 cut(s)	53, 257, 326, 379, 439, 563, 610, 633
PspXI	VCTCGAGB	1 cut(s)	844
PsuI	RGATCY	1 cut(s)	893
RsaI	GTAC	3 cut(s)	757, 859, 1049
RsaNI	GTAC	3 cut(s)	756, 858, 1048
Rsr2I	CGGWCCG	1 cut(s)	563
RsrII	CGGWCCG	1 cut(s)	563
SacII	CCGCGG	1 cut(s)	211
SapI	GCTCTTC	1 cut(s)	296
SaqAI	TTAA	1 cut(s)	741
SatI	GCNGC	9 cut(s)	211, 235, 238, 265, 268, 322, 385, 497, 840
Sau3AI	GATC	6 cut(s)	37, 360, 468, 893, 911, 930
Sau96I	GGNCC	8 cut(s)	53, 257, 326, 379, 439, 563, 610, 633
SchI	GAGTC	2 cut(s)	718, 1144
ScrFI	CCNGG	4 cut(s)	377, 437, 585, 596
SduI	GDGCHC	1 cut(s)	591
SfaNI	GCATC	2 cut(s)	131, 276
Sfr274I	CTCGAG	1 cut(s)	844
Sfr303I	CCGCGG	1 cut(s)	211
SgrBI	CCGCGG	1 cut(s)	211
SinI	GGWCC	4 cut(s)	326, 563, 610, 633
SlaI	CTCGAG	1 cut(s)	844
SmlI	CTYRAG	2 cut(s)	844, 1157
SmoI	CTYRAG	2 cut(s)	844, 1157
Sse9I	AATT	6 cut(s)	31, 481, 603, 616, 954, 1121
SspMI	CTAG	3 cut(s)	345, 701, 836
StyD4I	CCNGG	4 cut(s)	375, 435, 583, 594
TaaI	ACNGT	4 cut(s)	540, 806, 862, 1081
TaiI	ACGT	1 cut(s)	521
TaqI	TCGA	3 cut(s)	626, 845, 1114
TasI	AATT	6 cut(s)	31, 481, 603, 616, 954, 1121
TatI	WGTACW	1 cut(s)	1047
TauI	GCSGC	5 cut(s)	213, 237, 267, 270, 324
TfiI	GAWTC	3 cut(s)	59, 89, 276
Tru1I	TTAA	1 cut(s)	741
Tru9I	TTAA	1 cut(s)	741
TscAI	CASTG	4 cut(s)	302, 690, 1020, 1084
TseI	GCWGC	4 cut(s)	237, 384, 496, 839
TspDTI	ATGAA	1 cut(s)	948
TspGWI	ACGGA	1 cut(s)	175
TspRI	CASTG	4 cut(s)	302, 690, 1020, 1084
VpaK11BI	GGWCC	4 cut(s)	326, 563, 610, 633
XapI	RAATTY	1 cut(s)	603
XhoI	CTCGAG	1 cut(s)	844
XmiI	GTMKAC	1 cut(s)	477
XspI	CTAG	3 cut(s)	345, 701, 836

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.