Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0016870

Physical Location & Seq

Genomic Coordinates Forward (+)

4432524 .. 4435247

Gene Structure 2724 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G005300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1173 bp

ATGACCACCCTCTCTCCTCCTCCTCCTCCGAGTTTCAATCCTCTAAAACTCGCTCCCAAATCCCTCATTCCACCCAAACCCGCCTCCGCCTCCGAACCCGACCCGTCCATTACAGAAACCCCCACCACCCTCCTCCACCTGGCTTTCAACCAAGACCACACCTGCTTCTCCGCCGCCACCGACTCCGGCTTCCGCGTCTACACCTGCGACCCCTTCCGCCGCGTCCACAGCGACCCCGCCGGTCCACGCGGCGGCGTCGGATTCGTCCAGATGCTCTTCCACTGCCACTACTTCGCCATCTTCGGCGGCGGACCCGACCCGTTCTGCCCGCCCAACAAGGTCATGATCTACGACGATCGCCAGTCCCGCTGCGTCAGCGAGCTCTTGTTCCGGTCCGAGGTCAAGTCGGTCAGGCTCCGCCGCGACCGCATCGTCGTCGTTGTTCTCCACAAGATCTTCGTCTACGATTTCAACGCTTTGAAGCTGTTGGATTCGATTGTGACCGTGGAAAACCCTAAGGGACTTTGTGAGGTCTCGCATAATTCCGGGCCGGCCGTGCTGGCGTGTCCGGGCCTCCACCAGGGGCAAATTCGGGTCGAGCATTACGGGTCGAAGCGGACCAAGTTTATAACGGCACATCGCTCCGGTCTGGCGTGCTTTGCTCTCACTCATGATGGTCAGTTTCTAGCGACGGCCAGTAGTAAAGGGACTCTGGTCAGAGTTTTCAATACTTTGGATGGTACATTGCTCCAAGAGGTGAGGAGAGGAGCAGACAAGGCGGAGATTTACAGTCTTGCTTTCTCTTCCACTGCCCAATGGCTAGCTGTCTCAAGTGACAAGGGTACTGTCCATGTTTTCAGCGTAAAGGTTGACTCAGGATCTTTGGGGAATGATGGATCATGCGGTACATCAGAAATTAGTGGTTCTAATTCATCAGGCATTTCATCTCTGTCTTACATCAAAGCTGTCCTTCCAAGGTATTTTAGTTCAGAATGGTCAGTGGCCAAATTTCGCTTGCAGGAAGGTGTACGGTACATTGTTGCTTTTGGCCACCAGAAGAACACAGTTATCATTGTTGGCATGGATGGGAGCTTCTATCGATGTCAATTTGACCCTGTGAATGGAGGAGAAATGATTCAACTTGAATATTCCAATTTCCTAAAGGCGGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000045 GO:0000407 GO:0000422 GO:0003674 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006497 GO:0006807 GO:0006914 GO:0006996 GO:0007005 GO:0007033 GO:0008104 GO:0008150 GO:0008152 GO:0008289 GO:0009056 GO:0009058 GO:0009059 GO:0009987 GO:0016020 GO:0016043 GO:0016236 GO:0019538 GO:0019898 GO:0022411 GO:0022607 GO:0032266 GO:0033036 GO:0034045 GO:0034497 GO:0034613 GO:0034645 GO:0035091 GO:0036211 GO:0042157 GO:0042158 GO:0043167 GO:0043168 GO:0043170 GO:0043412 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0044804 GO:0051179 GO:0051641 GO:0061726 GO:0061919 GO:0070727 GO:0070925 GO:0071704 GO:0071840 GO:0080025 GO:0098805 GO:1901564 GO:1901566 GO:1901576 GO:1901981 GO:1902936 GO:1903008 GO:1905037

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

390

Amino Acids

42.64

Weight (kDa)

8.61

Isoelectric Point (pI)

40.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PROPPIN	PF21032	47 - 381	1.7e-32	PROPPIN
Beta-prop_THOC3	PF25174	112 - 289	2e-12	THOC3 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	145 - 289	8.1e-07	WDR3 first beta-propeller domain
WD40_WDHD1_1st	PF24817	159 - 283	8.1e-06	WDHD1 first WD40 domain
Beta-prop_EML_2	PF23414	194 - 290	4.7e-07	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR5	PF25175	211 - 290	9e-08	WDR5 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0016870)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g06351 FvH4_6g06351
rosa_chinensis	RchiOBHm_Chr3g0455451
rosa_laevigata	RLG00000025361
rosa_multiflora	Rmu_sc0003728.1_g000002
rosa_roxburghii	Rroxscaffold_2G00110450 Rroxscaffold_6G00424270
rosa_rugosa	Rorug03G0007700 Rorug03G0007700
rosa_samantha	Rh3AG067100 Rh3BG069400 Rh3CG067900 Rh3DG069400
rosa_wichuraiana	Rw3G005300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	629
AarI	CACCTGC	2 cut(s)	170, 212
AasI	GACNNNNNNGTC	1 cut(s)	431
Acc36I	ACCTGC	2 cut(s)	170, 212
AccI	GTMKAC	2 cut(s)	198, 462
AccII	CGCG	4 cut(s)	195, 222, 249, 423
AclWI	GGATC	2 cut(s)	886, 904
AcoI	YGGCCR	4 cut(s)	552, 693, 1002, 1048
AcsI	RAATTY	2 cut(s)	588, 1007
AcyI	GRCGYC	1 cut(s)	255
AfaI	GTAC	5 cut(s)	742, 844, 907, 1029, 1034
AfiI	CCNNNNNNNGG	6 cut(s)	139, 251, 397, 580, 1121, 1165
AgsI	TTSAA	7 cut(s)	37, 148, 472, 481, 727, 1139, 1145
AjnI	CCWGG	2 cut(s)	138, 579
AluBI	AGCT	5 cut(s)	382, 484, 824, 965, 1092
AluI	AGCT	5 cut(s)	382, 484, 824, 965, 1092
Alw21I	GWGCWC	1 cut(s)	384
Alw26I	GTCTC	2 cut(s)	538, 832
AlwI	GGATC	2 cut(s)	886, 904
AoxI	GGCC	6 cut(s)	548, 552, 571, 693, 1002, 1048
ApeKI	GCWGC	1 cut(s)	369
ApoI	RAATTY	2 cut(s)	588, 1007
Asp700I	GAANNNNTTC	1 cut(s)	1134
AspS9I	GGNCC	6 cut(s)	242, 311, 393, 548, 571, 618
AsuC2I	CCSGG	2 cut(s)	547, 570
AsuHPI	GGTGA	1 cut(s)	769
AsuNHI	GCTAGC	1 cut(s)	820
AvaII	GGWCC	4 cut(s)	242, 311, 393, 618
AxyI	CCTNAGG	1 cut(s)	516
BalI	TGGCCA	2 cut(s)	1004, 1050
BanII	GRGCYC	1 cut(s)	384
Bbv12I	GWGCWC	1 cut(s)	384
BbvI	GCAGC	1 cut(s)	356
BccI	CCATC	5 cut(s)	305, 668, 731, 887, 1079
BceAI	ACGGC	3 cut(s)	539, 648, 708
BcgI	CGANNNNNNTGC	2 cut(s)	418, 452
BciT130I	CCWGG	2 cut(s)	140, 581
BcnI	CCSGG	2 cut(s)	547, 570
BcoDI	GTCTC	2 cut(s)	538, 832
BfaI	CTAG	2 cut(s)	686, 821
BfuAI	ACCTGC	2 cut(s)	170, 212
BglI	GCCNNNNNGGC	1 cut(s)	560
BglII	AGATCT	1 cut(s)	453
BisI	GCNGC	7 cut(s)	174, 220, 250, 253, 307, 370, 421
BlsI	GCNGC	7 cut(s)	175, 221, 251, 254, 308, 371, 422
Bme1390I	CCNGG	4 cut(s)	140, 547, 570, 581
Bme18I	GGWCC	4 cut(s)	242, 311, 393, 618
BmgT120I	GGNCC	6 cut(s)	242, 311, 393, 548, 571, 618
BmiI	GGNNCC	2 cut(s)	313, 416
BmrFI	CCNGG	4 cut(s)	140, 547, 570, 581
BmsI	GCATC	2 cut(s)	261, 438
BmtI	GCTAGC	1 cut(s)	824
BoxI	GACNNNNGTC	1 cut(s)	713
BpuEI	CTTGAG	1 cut(s)	814
BpuMI	CCSGG	2 cut(s)	547, 570
Bsa29I	ATCGAT	1 cut(s)	1099
BsaHI	GRCGYC	1 cut(s)	255
BsaI	GGTCTC	1 cut(s)	538
BsaJI	CCNNGG	4 cut(s)	396, 504, 580, 974
BsaWI	WCCGGW	2 cut(s)	390, 644
BsaXI	ACNNNNNCTCC	1 cut(s)	28
Bsc4I	CCNNNNNNNGG	6 cut(s)	139, 251, 397, 580, 1121, 1165
Bse118I	RCCGGY	2 cut(s)	239, 550
Bse1I	ACTGG	2 cut(s)	361, 696
Bse21I	CCTNAGG	1 cut(s)	516
Bse3DI	GCAATG	1 cut(s)	743
BseBI	CCWGG	2 cut(s)	140, 581
BseCI	ATCGAT	1 cut(s)	1099
BseDI	CCNNGG	4 cut(s)	396, 504, 580, 974
BseGI	GGATG	2 cut(s)	742, 1090
BseLI	CCNNNNNNNGG	6 cut(s)	139, 251, 397, 580, 1121, 1165
BseMI	GCAATG	1 cut(s)	743
BseMII	CTCAG	1 cut(s)	888
BseNI	ACTGG	2 cut(s)	361, 696
BseRI	GAGGAG	8 cut(s)	6, 9, 12, 15, 122, 775, 780, 1140
BseX3I	CGGCCG	1 cut(s)	552
BseXI	GCAGC	1 cut(s)	356
Bsh1236I	CGCG	4 cut(s)	195, 222, 249, 423
Bsh1285I	CGRYCG	3 cut(s)	358, 427, 555
BshFI	GGCC	6 cut(s)	550, 554, 573, 695, 1004, 1050
BshVI	ATCGAT	1 cut(s)	1099
BsiEI	CGRYCG	3 cut(s)	358, 427, 555
BsiHKAI	GWGCWC	1 cut(s)	384
BsiSI	CCGG	7 cut(s)	186, 240, 391, 546, 551, 569, 645
BslFI	GGGAC	3 cut(s)	349, 534, 721
BslI	CCNNNNNNNGG	6 cut(s)	139, 251, 397, 580, 1121, 1165
BsmAI	GTCTC	2 cut(s)	538, 832
BsmFI	GGGAC	3 cut(s)	349, 534, 721
BsnI	GGCC	6 cut(s)	550, 554, 573, 695, 1004, 1050
Bso31I	GGTCTC	1 cut(s)	538
Bsp1286I	GDGCHC	1 cut(s)	384
Bsp143I	GATC	5 cut(s)	345, 355, 453, 878, 896
BspANI	GGCC	6 cut(s)	550, 554, 573, 695, 1004, 1050
BspCNI	CTCAG	1 cut(s)	887
BspDI	ATCGAT	1 cut(s)	1099
BspFNI	CGCG	4 cut(s)	195, 222, 249, 423
BspHI	TCATGA	2 cut(s)	342, 670
BspLI	GGNNCC	2 cut(s)	313, 416
BspMI	ACCTGC	2 cut(s)	170, 212
BspOI	GCTAGC	1 cut(s)	824
BspPI	GGATC	2 cut(s)	886, 904
BspQI	GCTCTTC	1 cut(s)	281
BspTNI	GGTCTC	1 cut(s)	538
BsrDI	GCAATG	1 cut(s)	743
BsrFI	RCCGGY	2 cut(s)	239, 550
BsrI	ACTGG	2 cut(s)	361, 696
BssAI	RCCGGY	2 cut(s)	239, 550
BssECI	CCNNGG	4 cut(s)	396, 504, 580, 974
BssMI	GATC	5 cut(s)	345, 355, 453, 878, 896
BssNI	GRCGYC	1 cut(s)	255
BssT1I	CCWWGG	1 cut(s)	974
Bst2UI	CCWGG	2 cut(s)	140, 581
Bst4CI	ACNGT	5 cut(s)	505, 791, 847, 1032, 1066
Bst6I	CTCTTC	2 cut(s)	281, 808
BstACI	GRCGYC	1 cut(s)	255
BstC8I	GCNNGC	7 cut(s)	329, 380, 552, 561, 655, 822, 1016
BstDEI	CTNAG	2 cut(s)	516, 874
BstDSI	CCRYGG	1 cut(s)	504
BstENI	CCTNNNNNAGG	1 cut(s)	578
BstF5I	GGATG	2 cut(s)	742, 1090
BstFNI	CGCG	4 cut(s)	195, 222, 249, 423
BstKTI	GATC	5 cut(s)	348, 358, 456, 881, 899
BstMAI	GTCTC	2 cut(s)	538, 832
BstMBI	GATC	5 cut(s)	345, 355, 453, 878, 896
BstMCI	CGRYCG	3 cut(s)	358, 427, 555
BstMWI	GCNNNNNNNGC	8 cut(s)	228, 366, 375, 426, 556, 560, 659, 776
BstNI	CCWGG	2 cut(s)	140, 581
BstPAI	GACNNNNGTC	1 cut(s)	713
BstSCI	CCNGG	4 cut(s)	138, 545, 568, 579
BstUI	CGCG	4 cut(s)	195, 222, 249, 423
BstV1I	GCAGC	1 cut(s)	356
BstX2I	RGATCY	2 cut(s)	453, 878
BstYI	RGATCY	2 cut(s)	453, 878
BstZI	CGGCCG	1 cut(s)	552
Bsu15I	ATCGAT	1 cut(s)	1099
Bsu36I	CCTNAGG	1 cut(s)	516
BsuRI	GGCC	6 cut(s)	550, 554, 573, 695, 1004, 1050
BsuTUI	ATCGAT	1 cut(s)	1099
BtgI	CCRYGG	1 cut(s)	504
BtgZI	GCGATG	1 cut(s)	623
BtsCI	GGATG	2 cut(s)	742, 1090
BtsI	GCAGTG	2 cut(s)	280, 807
BtsIMutI	CAGTG	3 cut(s)	280, 807, 1005
BveI	ACCTGC	2 cut(s)	170, 212
Cac8I	GCNNGC	7 cut(s)	329, 380, 552, 561, 655, 822, 1016
CciI	TCATGA	2 cut(s)	342, 670
Cfr10I	RCCGGY	2 cut(s)	239, 550
Cfr13I	GGNCC	6 cut(s)	242, 311, 393, 548, 571, 618
ClaI	ATCGAT	1 cut(s)	1099
CpoI	CGGWCCG	1 cut(s)	393
CseI	GACGC	4 cut(s)	184, 211, 244, 361
Csp6I	GTAC	5 cut(s)	741, 843, 906, 1028, 1033
CspI	CGGWCCG	1 cut(s)	393
CviAII	CATG	5 cut(s)	343, 671, 851, 900, 1081
CviQI	GTAC	5 cut(s)	741, 843, 906, 1028, 1033
DdeI	CTNAG	2 cut(s)	516, 874
DpnI	GATC	5 cut(s)	347, 357, 455, 880, 898
DpnII	GATC	5 cut(s)	345, 355, 453, 878, 896
DrdI	GACNNNNNNGTC	1 cut(s)	431
DseDI	GACNNNNNNGTC	1 cut(s)	431
EaeI	YGGCCR	4 cut(s)	552, 693, 1002, 1048
EagI	CGGCCG	1 cut(s)	552
Eam1104I	CTCTTC	2 cut(s)	281, 808
EarI	CTCTTC	2 cut(s)	281, 808
EciI	GGCGGA	6 cut(s)	76, 160, 206, 324, 407, 794
Ecl136II	GAGCTC	1 cut(s)	382
EclXI	CGGCCG	1 cut(s)	552
Eco130I	CCWWGG	1 cut(s)	974
Eco24I	GRGCYC	1 cut(s)	384
Eco31I	GGTCTC	1 cut(s)	538
Eco47I	GGWCC	4 cut(s)	242, 311, 393, 618
Eco52I	CGGCCG	1 cut(s)	552
Eco53kI	GAGCTC	1 cut(s)	382
Eco81I	CCTNAGG	1 cut(s)	516
EcoICRI	GAGCTC	1 cut(s)	382
EcoNI	CCTNNNNNAGG	1 cut(s)	578
EcoRII	CCWGG	2 cut(s)	138, 579
EcoT14I	CCWWGG	1 cut(s)	974
EcoT38I	GRGCYC	1 cut(s)	384
ErhI	CCWWGG	1 cut(s)	974
FaeI	CATG	5 cut(s)	346, 674, 854, 903, 1084
FaiI	YATR	7 cut(s)	344, 540, 629, 672, 852, 901, 1082
FalI	AAGNNNNNCTT	2 cut(s)	954, 986
FaqI	GGGAC	3 cut(s)	349, 534, 721
FatI	CATG	5 cut(s)	342, 670, 850, 899, 1080
FauI	CCCGC	4 cut(s)	88, 244, 336, 374
FblI	GTMKAC	2 cut(s)	198, 462
Fnu4HI	GCNGC	7 cut(s)	174, 220, 250, 253, 307, 370, 421
FokI	GGATG	2 cut(s)	749, 1097
FriOI	GRGCYC	1 cut(s)	384
FseI	GGCCGGCC	1 cut(s)	554
Fsp4HI	GCNGC	7 cut(s)	174, 220, 250, 253, 307, 370, 421
FspBI	CTAG	2 cut(s)	686, 821
GluI	GCNGC	7 cut(s)	174, 220, 250, 253, 307, 370, 421
HaeIII	GGCC	6 cut(s)	550, 554, 573, 695, 1004, 1050
HapII	CCGG	7 cut(s)	186, 240, 391, 546, 551, 569, 645
HgaI	GACGC	4 cut(s)	184, 211, 244, 361
Hin1I	GRCGYC	1 cut(s)	255
Hin1II	CATG	5 cut(s)	346, 674, 854, 903, 1084
HincII	GTYRAC	1 cut(s)	871
HindII	GTYRAC	1 cut(s)	871
HinfI	GANTC	6 cut(s)	182, 261, 491, 709, 872, 1135
HpaII	CCGG	7 cut(s)	186, 240, 391, 546, 551, 569, 645
HphI	GGTGA	1 cut(s)	769
Hpy166II	GTNNAC	6 cut(s)	199, 226, 245, 463, 871, 1028
Hpy188I	TCNGA	7 cut(s)	30, 94, 260, 397, 719, 913, 991
Hpy188III	TCNNGA	4 cut(s)	268, 343, 671, 876
Hpy8I	GTNNAC	6 cut(s)	199, 226, 245, 463, 871, 1028
Hpy99I	CGWCG	5 cut(s)	260, 356, 437, 440, 694
HpyAV	CCTTC	3 cut(s)	223, 980, 1016
HpyCH4III	ACNGT	5 cut(s)	505, 791, 847, 1032, 1066
HpyCH4V	TGCA	1 cut(s)	1018
HpyF10VI	GCNNNNNNNGC	8 cut(s)	228, 366, 375, 426, 556, 560, 659, 776
HpyF3I	CTNAG	2 cut(s)	516, 874
Hsp92I	GRCGYC	1 cut(s)	255
Hsp92II	CATG	5 cut(s)	346, 674, 854, 903, 1084
KroI	GCCGGC	1 cut(s)	550
KroNI	GCCGGC	1 cut(s)	552
Kzo9I	GATC	5 cut(s)	345, 355, 453, 878, 896
LguI	GCTCTTC	1 cut(s)	281
LmnI	GCTCC	6 cut(s)	58, 420, 647, 753, 767, 1089
Lsp1109I	GCAGC	1 cut(s)	356
LweI	GCATC	2 cut(s)	261, 438
MaeI	CTAG	2 cut(s)	686, 821
MaeIII	GTNAC	2 cut(s)	499, 833
MalI	GATC	5 cut(s)	347, 357, 455, 880, 898
MboI	GATC	5 cut(s)	345, 355, 453, 878, 896
MboII	GAAGA	5 cut(s)	268, 292, 448, 795, 1069
MflI	RGATCY	2 cut(s)	453, 878
MhlI	GDGCHC	1 cut(s)	384
MlsI	TGGCCA	2 cut(s)	1004, 1050
MluCI	AATT	7 cut(s)	541, 588, 915, 928, 1007, 1106, 1153
MluNI	TGGCCA	2 cut(s)	1004, 1050
MlyI	GAGTC	3 cut(s)	176, 703, 866
MmeI	TCCRAC	2 cut(s)	238, 468
Mox20I	TGGCCA	2 cut(s)	1004, 1050
MroNI	GCCGGC	1 cut(s)	550
MroXI	GAANNNNTTC	1 cut(s)	1134
MscI	TGGCCA	2 cut(s)	1004, 1050
Msp20I	TGGCCA	2 cut(s)	1004, 1050
MspA1I	CMGCKG	1 cut(s)	369
MspI	CCGG	7 cut(s)	186, 240, 391, 546, 551, 569, 645
MspR9I	CCNGG	4 cut(s)	140, 547, 570, 581
MvaI	CCWGG	2 cut(s)	140, 581
MvnI	CGCG	4 cut(s)	195, 222, 249, 423
MwoI	GCNNNNNNNGC	8 cut(s)	228, 366, 375, 426, 556, 560, 659, 776
NaeI	GCCGGC	1 cut(s)	552
NciI	CCSGG	2 cut(s)	547, 570
NdeII	GATC	5 cut(s)	345, 355, 453, 878, 896
NgoMIV	GCCGGC	1 cut(s)	550
NheI	GCTAGC	1 cut(s)	820
NlaIII	CATG	5 cut(s)	346, 674, 854, 903, 1084
NlaIV	GGNNCC	2 cut(s)	313, 416
NmuCI	GTSAC	2 cut(s)	499, 833
PagI	TCATGA	2 cut(s)	342, 670
PaqCI	CACCTGC	2 cut(s)	170, 212
PciSI	GCTCTTC	1 cut(s)	281
PdiI	GCCGGC	1 cut(s)	552
PdmI	GAANNNNTTC	1 cut(s)	1134
PfeI	GAWTC	3 cut(s)	261, 491, 1135
PkrI	GCNGC	7 cut(s)	175, 221, 251, 254, 308, 371, 422
Ple19I	CGATCG	1 cut(s)	358
PleI	GAGTC	3 cut(s)	176, 703, 866
PpsI	GAGTC	3 cut(s)	176, 703, 866
PshAI	GACNNNNGTC	1 cut(s)	713
PsiI	TTATAA	1 cut(s)	629
Psp124BI	GAGCTC	1 cut(s)	384
Psp6I	CCWGG	2 cut(s)	138, 579
PspGI	CCWGG	2 cut(s)	138, 579
PspN4I	GGNNCC	2 cut(s)	313, 416
PspPI	GGNCC	6 cut(s)	242, 311, 393, 548, 571, 618
PsuI	RGATCY	2 cut(s)	453, 878
PvuI	CGATCG	1 cut(s)	358
RigI	GGCCGGCC	1 cut(s)	554
RsaI	GTAC	5 cut(s)	742, 844, 907, 1029, 1034
RsaNI	GTAC	5 cut(s)	741, 843, 906, 1028, 1033
Rsr2I	CGGWCCG	1 cut(s)	393
RsrII	CGGWCCG	1 cut(s)	393
SacI	GAGCTC	1 cut(s)	384
SapI	GCTCTTC	1 cut(s)	281
SatI	GCNGC	7 cut(s)	174, 220, 250, 253, 307, 370, 421
Sau3AI	GATC	5 cut(s)	345, 355, 453, 878, 896
Sau96I	GGNCC	6 cut(s)	242, 311, 393, 548, 571, 618
SchI	GAGTC	3 cut(s)	176, 703, 866
ScrFI	CCNGG	4 cut(s)	140, 547, 570, 581
SduI	GDGCHC	1 cut(s)	384
SfaNI	GCATC	2 cut(s)	261, 438
SinI	GGWCC	4 cut(s)	242, 311, 393, 618
SmlI	CTYRAG	1 cut(s)	829
SmoI	CTYRAG	1 cut(s)	829
Sse9I	AATT	7 cut(s)	541, 588, 915, 928, 1007, 1106, 1153
SspI	AATATT	1 cut(s)	1148
SspMI	CTAG	2 cut(s)	686, 821
SstI	GAGCTC	1 cut(s)	384
StyD4I	CCNGG	4 cut(s)	138, 545, 568, 579
StyI	CCWWGG	1 cut(s)	974
TaaI	ACNGT	5 cut(s)	505, 791, 847, 1032, 1066
TaqI	TCGA	4 cut(s)	494, 597, 611, 1099
TaqII	GACCGA	1 cut(s)	397
TasI	AATT	7 cut(s)	541, 588, 915, 928, 1007, 1106, 1153
TauI	GCSGC	6 cut(s)	176, 222, 252, 255, 309, 423
TfiI	GAWTC	3 cut(s)	261, 491, 1135
TscAI	CASTG	3 cut(s)	287, 814, 1005
TseFI	GTSAC	2 cut(s)	499, 833
TseI	GCWGC	1 cut(s)	369
Tsp45I	GTSAC	2 cut(s)	499, 833
TspDTI	ATGAA	2 cut(s)	921, 933
TspRI	CASTG	3 cut(s)	287, 814, 1005
VpaK11BI	GGWCC	4 cut(s)	242, 311, 393, 618
XagI	CCTNNNNNAGG	1 cut(s)	578
XapI	RAATTY	2 cut(s)	588, 1007
XmiI	GTMKAC	2 cut(s)	198, 462
XmnI	GAANNNNTTC	1 cut(s)	1134
XspI	CTAG	2 cut(s)	686, 821

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.