Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0016870

Physical Location & Seq

Genomic Coordinates Reverse (-)

45284035 .. 45286652

Gene Structure 2618 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000025361

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1188 bp

ATGACCACCCTCTCTCCTCCTCCTCCGACTTTCAATCCTCTGAAACTCGCTCCCAAATCCCTCATTCCACCCAAACCCGCCTCCGACTCGAAATCCGACCCGTCCGTTACAGAAACCCCAAACCCGACCCAATCCCCCACCACCCTCCTCCACCTGGCTTTCAACCAAGACCACACCTGCTTCTCCGCCGCCACCGACTCCGGCTTCCGCGTCTACACCTGCGACCCCTTCCGCCGCTTCCATAGCGACCCTTCCGGTCCACGCGGCGGCGTCGGATTCGTCCAGATGCTCTTCCACTGCCACTACTTCGCCGTCTTCGGCGGCGGACCCGACCCGTTCTGCCCGCCCAACAAGGTCATGATCTACGACGATCGCCAGTCCCGCTGCGTCAGCGAGCTCTTGTTCCGGTCCGAGGTCAAGTCGGTCAGGCTCCGCCGCGACCGAATCGTCGTCGTTGTTCTCCACAAGATCTTCGTCTACGATTTCAACGCTTTGAAGCTGTTGGATTCGATTGTGACCGTGGAAAACCCTAAGGGACTGTGTGAGGTCTCGCATAAGTCCGGGCCGGCCGTGCTGGCGTGTCCGGGGCTCCACCAGGGGCAAATTCGGGTCGAGCATTACGGGTCGAAGCGGACCAAGTTTATAACGGCTCATTGCTCCGGTCTCGCGTGCTTTGCTCTAACTCATGATGGTCAGTTTCTAGCGACGGCGAGTAGTAAAGGGACTCTGGTTAGAGTTTTCAATACTTTGGATGGTGCATTGCTCCAAGAGGTGAGGAGAGGAGCAGACAAAGCGGAGATTTACAGTCTTGCTTTCTCTTCCACTGCCCAATGGCTAGCTGTCTCAAGTGACAAGGGTACTGTCCATGTTTTCAGCATAAAGGTTGACTCAGGATCTTTGGGGAATGATGGATCATGCAGTACATCAGAAATCAGTGGTTCTAATTCCTCAGGCATTTCATCTCTGTCTTACATCAAAGCTGTCCTTCCAAGGTATTTTAGTTCAGAATGGTCAGTGGCCAAATTTCGCTTGCAGGAAGGTGTACGGTACATTGTTGCCTTTGGCCACCAGAAGAACACAGTTATCATTGTTGGCATGGATGGGAGCTTCTATCGATGTCAATTTGACCCTGTGAATGGAGGAGAAATGATTCAGCTTGAATATTCCAATTTCCTGAAGGCAGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000045 GO:0000407 GO:0000422 GO:0003674 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006497 GO:0006807 GO:0006914 GO:0006996 GO:0007005 GO:0007033 GO:0008104 GO:0008150 GO:0008152 GO:0008289 GO:0009056 GO:0009058 GO:0009059 GO:0009987 GO:0016020 GO:0016043 GO:0016236 GO:0019538 GO:0019898 GO:0022411 GO:0022607 GO:0032266 GO:0033036 GO:0034045 GO:0034497 GO:0034613 GO:0034645 GO:0035091 GO:0036211 GO:0042157 GO:0042158 GO:0043167 GO:0043168 GO:0043170 GO:0043412 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0044804 GO:0051179 GO:0051641 GO:0061726 GO:0061919 GO:0070727 GO:0070925 GO:0071704 GO:0071840 GO:0080025 GO:0098805 GO:1901564 GO:1901566 GO:1901576 GO:1901981 GO:1902936 GO:1903008 GO:1905037

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

396

Amino Acids

43.22

Weight (kDa)

8.69

Isoelectric Point (pI)

39.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PROPPIN	PF21032	52 - 386	1.1e-31	PROPPIN
Beta-prop_THOC3	PF25174	117 - 294	1.9e-11	THOC3 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	150 - 294	8e-06	WDR3 first beta-propeller domain
Beta-prop_EML_2	PF23414	200 - 295	4e-06	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR5	PF25175	216 - 294	5.5e-07	WDR5 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016870)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g06351 FvH4_6g06351
rosa_chinensis	RchiOBHm_Chr3g0455451
rosa_laevigata	RLG00000025361
rosa_multiflora	Rmu_sc0003728.1_g000002
rosa_roxburghii	Rroxscaffold_2G00110450 Rroxscaffold_6G00424270
rosa_rugosa	Rorug03G0007700 Rorug03G0007700
rosa_samantha	Rh3AG067100 Rh3BG069400 Rh3CG067900 Rh3DG069400
rosa_wichuraiana	Rw3G005300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	644
AarI	CACCTGC	2 cut(s)	185, 227
AasI	GACNNNNNNGTC	1 cut(s)	446
Acc36I	ACCTGC	2 cut(s)	185, 227
AccI	GTMKAC	2 cut(s)	213, 477
AccII	CGCG	4 cut(s)	210, 264, 438, 668
AclWI	GGATC	2 cut(s)	901, 919
AcoI	YGGCCR	3 cut(s)	567, 1017, 1063
AcsI	RAATTY	2 cut(s)	603, 1022
AcyI	GRCGYC	1 cut(s)	270
AfaI	GTAC	4 cut(s)	859, 922, 1044, 1049
AfiI	CCNNNNNNNGG	4 cut(s)	154, 266, 412, 1136
AgsI	TTSAA	6 cut(s)	34, 163, 487, 496, 742, 1160
AjnI	CCWGG	2 cut(s)	153, 594
AluBI	AGCT	6 cut(s)	397, 499, 839, 980, 1107, 1156
AluI	AGCT	6 cut(s)	397, 499, 839, 980, 1107, 1156
Alw21I	GWGCWC	1 cut(s)	399
Alw26I	GTCTC	3 cut(s)	553, 668, 847
AlwI	GGATC	2 cut(s)	901, 919
AoxI	GGCC	4 cut(s)	563, 567, 1017, 1063
ApeKI	GCWGC	1 cut(s)	384
ApoI	RAATTY	2 cut(s)	603, 1022
Asp700I	GAANNNNTTC	1 cut(s)	1149
AspS9I	GGNCC	5 cut(s)	257, 326, 408, 563, 633
AsuC2I	CCSGG	2 cut(s)	562, 585
AsuHPI	GGTGA	1 cut(s)	784
AsuNHI	GCTAGC	1 cut(s)	835
AvaII	GGWCC	4 cut(s)	257, 326, 408, 633
AxyI	CCTNAGG	2 cut(s)	531, 949
BalI	TGGCCA	2 cut(s)	1019, 1065
BanII	GRGCYC	2 cut(s)	399, 591
BbsI	GAAGAC	1 cut(s)	307
Bbv12I	GWGCWC	1 cut(s)	399
BbvI	GCAGC	1 cut(s)	371
BccI	CCATC	4 cut(s)	683, 746, 902, 1094
BceAI	ACGGC	4 cut(s)	296, 554, 663, 723
BciT130I	CCWGG	2 cut(s)	155, 596
BcnI	CCSGG	2 cut(s)	562, 585
BcoDI	GTCTC	3 cut(s)	553, 668, 847
BfaI	CTAG	2 cut(s)	701, 836
BfuAI	ACCTGC	2 cut(s)	185, 227
BglI	GCCNNNNNGGC	1 cut(s)	575
BglII	AGATCT	1 cut(s)	468
BisI	GCNGC	7 cut(s)	189, 235, 265, 268, 322, 385, 436
BlsI	GCNGC	7 cut(s)	190, 236, 266, 269, 323, 386, 437
Bme1390I	CCNGG	4 cut(s)	155, 562, 585, 596
Bme18I	GGWCC	4 cut(s)	257, 326, 408, 633
BmgT120I	GGNCC	5 cut(s)	257, 326, 408, 563, 633
BmiI	GGNNCC	3 cut(s)	328, 431, 590
BmrFI	CCNGG	4 cut(s)	155, 562, 585, 596
BmsI	GCATC	1 cut(s)	276
BmtI	GCTAGC	1 cut(s)	839
BpiI	GAAGAC	1 cut(s)	307
BpuEI	CTTGAG	1 cut(s)	829
BpuMI	CCSGG	2 cut(s)	562, 585
Bsa29I	ATCGAT	1 cut(s)	1114
BsaHI	GRCGYC	1 cut(s)	270
BsaI	GGTCTC	2 cut(s)	553, 668
BsaJI	CCNNGG	5 cut(s)	411, 519, 584, 595, 989
BsaWI	WCCGGW	3 cut(s)	254, 405, 659
BsaXI	ACNNNNNCTCC	1 cut(s)	28
Bsc4I	CCNNNNNNNGG	4 cut(s)	154, 266, 412, 1136
Bse118I	RCCGGY	1 cut(s)	565
Bse1I	ACTGG	1 cut(s)	376
Bse21I	CCTNAGG	2 cut(s)	531, 949
Bse3DI	GCAATG	2 cut(s)	652, 758
BseBI	CCWGG	2 cut(s)	155, 596
BseCI	ATCGAT	1 cut(s)	1114
BseDI	CCNNGG	5 cut(s)	411, 519, 584, 595, 989
BseGI	GGATG	2 cut(s)	757, 1105
BseLI	CCNNNNNNNGG	4 cut(s)	154, 266, 412, 1136
BseMI	GCAATG	2 cut(s)	652, 758
BseMII	CTCAG	2 cut(s)	903, 963
BseNI	ACTGG	1 cut(s)	376
BseRI	GAGGAG	7 cut(s)	6, 9, 12, 137, 790, 795, 1155
BseX3I	CGGCCG	1 cut(s)	567
BseXI	GCAGC	1 cut(s)	371
Bsh1236I	CGCG	4 cut(s)	210, 264, 438, 668
Bsh1285I	CGRYCG	3 cut(s)	373, 442, 570
BshFI	GGCC	4 cut(s)	565, 569, 1019, 1065
BshVI	ATCGAT	1 cut(s)	1114
BsiEI	CGRYCG	3 cut(s)	373, 442, 570
BsiHKAI	GWGCWC	1 cut(s)	399
BsiSI	CCGG	7 cut(s)	201, 255, 406, 561, 566, 584, 660
BslFI	GGGAC	3 cut(s)	364, 549, 736
BslI	CCNNNNNNNGG	4 cut(s)	154, 266, 412, 1136
BsmAI	GTCTC	3 cut(s)	553, 668, 847
BsmFI	GGGAC	3 cut(s)	364, 549, 736
BsnI	GGCC	4 cut(s)	565, 569, 1019, 1065
Bso31I	GGTCTC	2 cut(s)	553, 668
Bsp1286I	GDGCHC	2 cut(s)	399, 591
Bsp143I	GATC	5 cut(s)	360, 370, 468, 893, 911
BspANI	GGCC	4 cut(s)	565, 569, 1019, 1065
BspCNI	CTCAG	2 cut(s)	902, 962
BspDI	ATCGAT	1 cut(s)	1114
BspFNI	CGCG	4 cut(s)	210, 264, 438, 668
BspHI	TCATGA	2 cut(s)	357, 685
BspLI	GGNNCC	3 cut(s)	328, 431, 590
BspMI	ACCTGC	2 cut(s)	185, 227
BspOI	GCTAGC	1 cut(s)	839
BspPI	GGATC	2 cut(s)	901, 919
BspQI	GCTCTTC	1 cut(s)	296
BspTNI	GGTCTC	2 cut(s)	553, 668
BsrDI	GCAATG	2 cut(s)	652, 758
BsrFI	RCCGGY	1 cut(s)	565
BsrI	ACTGG	1 cut(s)	376
BssAI	RCCGGY	1 cut(s)	565
BssECI	CCNNGG	5 cut(s)	411, 519, 584, 595, 989
BssMI	GATC	5 cut(s)	360, 370, 468, 893, 911
BssNI	GRCGYC	1 cut(s)	270
BssT1I	CCWWGG	1 cut(s)	989
Bst2UI	CCWGG	2 cut(s)	155, 596
Bst4CI	ACNGT	6 cut(s)	520, 540, 806, 862, 1047, 1081
Bst6I	CTCTTC	2 cut(s)	296, 823
BstACI	GRCGYC	1 cut(s)	270
BstC8I	GCNNGC	7 cut(s)	344, 395, 567, 576, 670, 837, 1031
BstDEI	CTNAG	3 cut(s)	531, 889, 949
BstDSI	CCRYGG	1 cut(s)	519
BstF5I	GGATG	2 cut(s)	757, 1105
BstFNI	CGCG	4 cut(s)	210, 264, 438, 668
BstKTI	GATC	5 cut(s)	363, 373, 471, 896, 914
BstMAI	GTCTC	3 cut(s)	553, 668, 847
BstMBI	GATC	5 cut(s)	360, 370, 468, 893, 911
BstMCI	CGRYCG	3 cut(s)	373, 442, 570
BstMWI	GCNNNNNNNGC	7 cut(s)	243, 381, 390, 571, 575, 674, 791
BstNI	CCWGG	2 cut(s)	155, 596
BstSCI	CCNGG	4 cut(s)	153, 560, 583, 594
BstUI	CGCG	4 cut(s)	210, 264, 438, 668
BstV1I	GCAGC	1 cut(s)	371
BstV2I	GAAGAC	1 cut(s)	307
BstX2I	RGATCY	2 cut(s)	468, 893
BstYI	RGATCY	2 cut(s)	468, 893
BstZI	CGGCCG	1 cut(s)	567
Bsu15I	ATCGAT	1 cut(s)	1114
Bsu36I	CCTNAGG	2 cut(s)	531, 949
BsuRI	GGCC	4 cut(s)	565, 569, 1019, 1065
BsuTUI	ATCGAT	1 cut(s)	1114
BtgI	CCRYGG	1 cut(s)	519
BtsCI	GGATG	2 cut(s)	757, 1105
BtsI	GCAGTG	2 cut(s)	295, 822
BtsIMutI	CAGTG	4 cut(s)	295, 822, 940, 1020
BveI	ACCTGC	2 cut(s)	185, 227
Cac8I	GCNNGC	7 cut(s)	344, 395, 567, 576, 670, 837, 1031
CciI	TCATGA	2 cut(s)	357, 685
Cfr10I	RCCGGY	1 cut(s)	565
Cfr13I	GGNCC	5 cut(s)	257, 326, 408, 563, 633
ClaI	ATCGAT	1 cut(s)	1114
CpoI	CGGWCCG	1 cut(s)	408
CseI	GACGC	3 cut(s)	199, 259, 376
Csp6I	GTAC	4 cut(s)	858, 921, 1043, 1048
CspI	CGGWCCG	1 cut(s)	408
CviAII	CATG	5 cut(s)	358, 686, 866, 915, 1096
CviQI	GTAC	4 cut(s)	858, 921, 1043, 1048
DdeI	CTNAG	3 cut(s)	531, 889, 949
DpnI	GATC	5 cut(s)	362, 372, 470, 895, 913
DpnII	GATC	5 cut(s)	360, 370, 468, 893, 911
DrdI	GACNNNNNNGTC	1 cut(s)	446
DseDI	GACNNNNNNGTC	1 cut(s)	446
EaeI	YGGCCR	3 cut(s)	567, 1017, 1063
EagI	CGGCCG	1 cut(s)	567
Eam1104I	CTCTTC	2 cut(s)	296, 823
EarI	CTCTTC	2 cut(s)	296, 823
EciI	GGCGGA	4 cut(s)	175, 221, 339, 422
Ecl136II	GAGCTC	1 cut(s)	397
EclXI	CGGCCG	1 cut(s)	567
Eco130I	CCWWGG	1 cut(s)	989
Eco24I	GRGCYC	2 cut(s)	399, 591
Eco31I	GGTCTC	2 cut(s)	553, 668
Eco47I	GGWCC	4 cut(s)	257, 326, 408, 633
Eco52I	CGGCCG	1 cut(s)	567
Eco53kI	GAGCTC	1 cut(s)	397
Eco81I	CCTNAGG	2 cut(s)	531, 949
EcoICRI	GAGCTC	1 cut(s)	397
EcoRII	CCWGG	2 cut(s)	153, 594
EcoT14I	CCWWGG	1 cut(s)	989
EcoT38I	GRGCYC	2 cut(s)	399, 591
ErhI	CCWWGG	1 cut(s)	989
FaeI	CATG	5 cut(s)	361, 689, 869, 918, 1099
FaiI	YATR	9 cut(s)	243, 359, 555, 644, 687, 867, 878, 916, 1097
FalI	AAGNNNNNCTT	2 cut(s)	969, 1001
FaqI	GGGAC	3 cut(s)	364, 549, 736
FatI	CATG	5 cut(s)	357, 685, 865, 914, 1095
FauI	CCCGC	3 cut(s)	85, 351, 389
FblI	GTMKAC	2 cut(s)	213, 477
Fnu4HI	GCNGC	7 cut(s)	189, 235, 265, 268, 322, 385, 436
FokI	GGATG	2 cut(s)	764, 1112
FriOI	GRGCYC	2 cut(s)	399, 591
FseI	GGCCGGCC	1 cut(s)	569
Fsp4HI	GCNGC	7 cut(s)	189, 235, 265, 268, 322, 385, 436
FspBI	CTAG	2 cut(s)	701, 836
GluI	GCNGC	7 cut(s)	189, 235, 265, 268, 322, 385, 436
HaeIII	GGCC	4 cut(s)	565, 569, 1019, 1065
HapII	CCGG	7 cut(s)	201, 255, 406, 561, 566, 584, 660
HgaI	GACGC	3 cut(s)	199, 259, 376
Hin1I	GRCGYC	1 cut(s)	270
Hin1II	CATG	5 cut(s)	361, 689, 869, 918, 1099
HincII	GTYRAC	1 cut(s)	886
HindII	GTYRAC	1 cut(s)	886
HinfI	GANTC	8 cut(s)	86, 197, 276, 444, 506, 724, 887, 1150
HpaII	CCGG	7 cut(s)	201, 255, 406, 561, 566, 584, 660
HphI	GGTGA	1 cut(s)	784
Hpy166II	GTNNAC	5 cut(s)	214, 260, 478, 886, 1043
Hpy188I	TCNGA	8 cut(s)	27, 42, 85, 97, 275, 412, 928, 1006
Hpy188III	TCNNGA	5 cut(s)	283, 358, 686, 891, 1174
Hpy8I	GTNNAC	5 cut(s)	214, 260, 478, 886, 1043
Hpy99I	CGWCG	5 cut(s)	275, 371, 452, 455, 709
HpyAV	CCTTC	5 cut(s)	238, 261, 995, 1031, 1171
HpyCH4III	ACNGT	6 cut(s)	520, 540, 806, 862, 1047, 1081
HpyCH4V	TGCA	3 cut(s)	758, 918, 1033
HpyF10VI	GCNNNNNNNGC	7 cut(s)	243, 381, 390, 571, 575, 674, 791
HpyF3I	CTNAG	3 cut(s)	531, 889, 949
Hsp92I	GRCGYC	1 cut(s)	270
Hsp92II	CATG	5 cut(s)	361, 689, 869, 918, 1099
KroI	GCCGGC	1 cut(s)	565
KroNI	GCCGGC	1 cut(s)	567
Kzo9I	GATC	5 cut(s)	360, 370, 468, 893, 911
LguI	GCTCTTC	1 cut(s)	296
LmnI	GCTCC	7 cut(s)	55, 435, 594, 662, 768, 782, 1104
Lsp1109I	GCAGC	1 cut(s)	371
LweI	GCATC	1 cut(s)	276
MaeI	CTAG	2 cut(s)	701, 836
MaeIII	GTNAC	3 cut(s)	106, 514, 848
MalI	GATC	5 cut(s)	362, 372, 470, 895, 913
MboI	GATC	5 cut(s)	360, 370, 468, 893, 911
MboII	GAAGA	5 cut(s)	283, 307, 463, 810, 1084
MflI	RGATCY	2 cut(s)	468, 893
MhlI	GDGCHC	2 cut(s)	399, 591
MlsI	TGGCCA	2 cut(s)	1019, 1065
MluCI	AATT	5 cut(s)	603, 943, 1022, 1121, 1168
MluNI	TGGCCA	2 cut(s)	1019, 1065
MlyI	GAGTC	4 cut(s)	80, 191, 718, 881
MmeI	TCCRAC	5 cut(s)	50, 108, 120, 253, 483
Mox20I	TGGCCA	2 cut(s)	1019, 1065
MroNI	GCCGGC	1 cut(s)	565
MroXI	GAANNNNTTC	1 cut(s)	1149
MscI	TGGCCA	2 cut(s)	1019, 1065
Msp20I	TGGCCA	2 cut(s)	1019, 1065
MspA1I	CMGCKG	1 cut(s)	384
MspI	CCGG	7 cut(s)	201, 255, 406, 561, 566, 584, 660
MspR9I	CCNGG	4 cut(s)	155, 562, 585, 596
MvaI	CCWGG	2 cut(s)	155, 596
MvnI	CGCG	4 cut(s)	210, 264, 438, 668
MwoI	GCNNNNNNNGC	7 cut(s)	243, 381, 390, 571, 575, 674, 791
NaeI	GCCGGC	1 cut(s)	567
NciI	CCSGG	2 cut(s)	562, 585
NdeII	GATC	5 cut(s)	360, 370, 468, 893, 911
NgoMIV	GCCGGC	1 cut(s)	565
NheI	GCTAGC	1 cut(s)	835
NlaIII	CATG	5 cut(s)	361, 689, 869, 918, 1099
NlaIV	GGNNCC	3 cut(s)	328, 431, 590
NmuCI	GTSAC	2 cut(s)	514, 848
PagI	TCATGA	2 cut(s)	357, 685
PaqCI	CACCTGC	2 cut(s)	185, 227
PciSI	GCTCTTC	1 cut(s)	296
PdiI	GCCGGC	1 cut(s)	567
PdmI	GAANNNNTTC	1 cut(s)	1149
PfeI	GAWTC	4 cut(s)	276, 444, 506, 1150
PkrI	GCNGC	7 cut(s)	190, 236, 266, 269, 323, 386, 437
Ple19I	CGATCG	1 cut(s)	373
PleI	GAGTC	4 cut(s)	80, 191, 718, 881
PpsI	GAGTC	4 cut(s)	80, 191, 718, 881
PsiI	TTATAA	1 cut(s)	644
Psp124BI	GAGCTC	1 cut(s)	399
Psp6I	CCWGG	2 cut(s)	153, 594
PspGI	CCWGG	2 cut(s)	153, 594
PspN4I	GGNNCC	3 cut(s)	328, 431, 590
PspPI	GGNCC	5 cut(s)	257, 326, 408, 563, 633
PsuI	RGATCY	2 cut(s)	468, 893
PvuI	CGATCG	1 cut(s)	373
RigI	GGCCGGCC	1 cut(s)	569
RsaI	GTAC	4 cut(s)	859, 922, 1044, 1049
RsaNI	GTAC	4 cut(s)	858, 921, 1043, 1048
Rsr2I	CGGWCCG	1 cut(s)	408
RsrII	CGGWCCG	1 cut(s)	408
SacI	GAGCTC	1 cut(s)	399
SapI	GCTCTTC	1 cut(s)	296
SatI	GCNGC	7 cut(s)	189, 235, 265, 268, 322, 385, 436
Sau3AI	GATC	5 cut(s)	360, 370, 468, 893, 911
Sau96I	GGNCC	5 cut(s)	257, 326, 408, 563, 633
SchI	GAGTC	4 cut(s)	80, 191, 718, 881
ScrFI	CCNGG	4 cut(s)	155, 562, 585, 596
SduI	GDGCHC	2 cut(s)	399, 591
SfaNI	GCATC	1 cut(s)	276
SinI	GGWCC	4 cut(s)	257, 326, 408, 633
SmlI	CTYRAG	1 cut(s)	844
SmoI	CTYRAG	1 cut(s)	844
Sse9I	AATT	5 cut(s)	603, 943, 1022, 1121, 1168
SspI	AATATT	1 cut(s)	1163
SspMI	CTAG	2 cut(s)	701, 836
SstI	GAGCTC	1 cut(s)	399
StyD4I	CCNGG	4 cut(s)	153, 560, 583, 594
StyI	CCWWGG	1 cut(s)	989
TaaI	ACNGT	6 cut(s)	520, 540, 806, 862, 1047, 1081
TaqI	TCGA	5 cut(s)	89, 509, 612, 626, 1114
TaqII	GACCGA	2 cut(s)	412, 456
TasI	AATT	5 cut(s)	603, 943, 1022, 1121, 1168
TatI	WGTACW	1 cut(s)	920
TauI	GCSGC	6 cut(s)	191, 237, 267, 270, 324, 438
TfiI	GAWTC	4 cut(s)	276, 444, 506, 1150
TscAI	CASTG	4 cut(s)	302, 829, 940, 1020
TseFI	GTSAC	2 cut(s)	514, 848
TseI	GCWGC	1 cut(s)	384
Tsp45I	GTSAC	2 cut(s)	514, 848
TspDTI	ATGAA	1 cut(s)	948
TspGWI	ACGGA	1 cut(s)	94
TspRI	CASTG	4 cut(s)	302, 829, 940, 1020
VpaK11BI	GGWCC	4 cut(s)	257, 326, 408, 633
XapI	RAATTY	2 cut(s)	603, 1022
XmiI	GTMKAC	2 cut(s)	213, 477
XmnI	GAANNNNTTC	1 cut(s)	1149
XspI	CTAG	2 cut(s)	701, 836

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.