Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0016870

Physical Location & Seq

Genomic Coordinates Forward (+)

4677641 .. 4680362

Gene Structure 2722 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG067100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1203 bp

ATGACCACCCTGTCTCCTCCTCCTCCTCCGAGTTTCAATCCTCTAAAACTCGCTCCCAAATCCCTCATTCCACCCAAACCCGCCTCCGCCTCCGAACCCGACCCGTCCGTTACAGAAACCCCAACCCCAGGCCCAAACCCGACTCCATCCCCCACCACCCTCCTCCACCTGGCTTTCAACCAAGACCACACCTGCTTCTCCGCCGCCACCGACTCCGGCTTCCGCGTCTACACCTGCGACCCCTTCCGCCGCTTCCACAGCGACCCCTCCGGTCCACGCGGCGGCGTCGGATTCGTCCAGATGCTCTTCCACTGCCACTACTTCGCCGTCTTCGGCGGCGGACCCGACCCGTTCTGCCCGCCCAACAAGGTCATGATCTACGACGATCGCCAGTCCCGCTGCGTCAGCGAGCTCTTGTTCCGGTCCGAGGTCAAGTCGGTCAGGCTCCGCCGCGACCGCATCGTCGTCGTTGTTCTCCACAAGATCTTCGTCTACGATTTCAACGCTTTGAAGCTGTTGGATTCGATTGTGACCGTGGAAAACCCTAAGGGACTGTGTGAGGTCTCGCATAATACCGGGCCGGCCGTGCTGGCGTGTCCGGGCCTCCACCAGGGGCAAATTCGGGTCGAGCATTACGGGTCGAAGCGGACCAAGTTTATAACGGCACATCGCTCCGGTCTGGCGTGCTTTGCTCTCACTCATGATGGTCAGTTTCTAGCGACGGCGAGTAGTAAAGGGACTCTGGTCAGATTATTCAATACTTTGGATGGTACATTGCTCCAAGAGGTGAGGAGAGGAGCAGACAAAGCGGAGATTTACAGTCTTGCTTTCTCTTCCACTGCCCAATGGCTAGCTGTCTCAAGTGACAAGGGTACTGTCCATGTTTTCAGTGTAAAGGTTGACTCAGGATCTTTGGGGAATGATGGATCATGCAGTACATCAGAAATTAGTGGTTCTAATTCATCAGGCATTTCATCTCTGTCTTACATCAAAGCTGTCCTTCCAAGGTATTTTAGTTCAGAATGGTCAGTGGCCAAATTTCGCTTGCAGGAAGGTGTACGGTACATTGTTGCTTTTGGCCACCAGAAGAACACAGTTATCATTGTTGGCATGGATGGGAGCTTCTATCGATGTCAGTTTGACCCTGTGAATGGAGGAGAAATGATTCAGCTTGAATATTCCAATTTCCTAAAGGCGGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000045 GO:0000407 GO:0000422 GO:0003674 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006497 GO:0006807 GO:0006914 GO:0006996 GO:0007005 GO:0007033 GO:0008104 GO:0008150 GO:0008152 GO:0008289 GO:0009056 GO:0009058 GO:0009059 GO:0009987 GO:0016020 GO:0016043 GO:0016236 GO:0019538 GO:0019898 GO:0022411 GO:0022607 GO:0032266 GO:0033036 GO:0034045 GO:0034497 GO:0034613 GO:0034645 GO:0035091 GO:0036211 GO:0042157 GO:0042158 GO:0043167 GO:0043168 GO:0043170 GO:0043412 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0044804 GO:0051179 GO:0051641 GO:0061726 GO:0061919 GO:0070727 GO:0070925 GO:0071704 GO:0071840 GO:0080025 GO:0098805 GO:1901564 GO:1901566 GO:1901576 GO:1901981 GO:1902936 GO:1903008 GO:1905037

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

400

Amino Acids

43.68

Weight (kDa)

8.61

Isoelectric Point (pI)

40.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PROPPIN	PF21032	57 - 391	4.5e-32	PROPPIN
Beta-prop_THOC3	PF25174	122 - 299	1e-12	THOC3 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	155 - 299	3e-06	WDR3 first beta-propeller domain
Beta-prop_EML_2	PF23414	204 - 301	6.3e-07	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR5	PF25175	221 - 300	1.4e-07	WDR5 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0016870)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g06351 FvH4_6g06351
rosa_chinensis	RchiOBHm_Chr3g0455451
rosa_laevigata	RLG00000025361
rosa_multiflora	Rmu_sc0003728.1_g000002
rosa_roxburghii	Rroxscaffold_2G00110450 Rroxscaffold_6G00424270
rosa_rugosa	Rorug03G0007700 Rorug03G0007700
rosa_samantha	Rh3AG067100 Rh3BG069400 Rh3CG067900 Rh3DG069400
rosa_wichuraiana	Rw3G005300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	659
AarI	CACCTGC	2 cut(s)	200, 242
AasI	GACNNNNNNGTC	2 cut(s)	10, 461
Acc36I	ACCTGC	2 cut(s)	200, 242
AccI	GTMKAC	2 cut(s)	228, 492
AccII	CGCG	3 cut(s)	225, 279, 453
AclWI	GGATC	2 cut(s)	916, 934
AcoI	YGGCCR	3 cut(s)	582, 1032, 1078
AcsI	RAATTY	2 cut(s)	618, 1037
AcyI	GRCGYC	1 cut(s)	285
AfaI	GTAC	5 cut(s)	772, 874, 937, 1059, 1064
AfiI	CCNNNNNNNGG	7 cut(s)	128, 169, 281, 427, 610, 1151, 1195
AgsI	TTSAA	6 cut(s)	37, 178, 502, 511, 757, 1175
AjnI	CCWGG	3 cut(s)	127, 168, 609
AluBI	AGCT	6 cut(s)	412, 514, 854, 995, 1122, 1171
AluI	AGCT	6 cut(s)	412, 514, 854, 995, 1122, 1171
Alw21I	GWGCWC	1 cut(s)	414
Alw26I	GTCTC	3 cut(s)	18, 568, 862
AlwI	GGATC	2 cut(s)	916, 934
AoxI	GGCC	6 cut(s)	130, 578, 582, 601, 1032, 1078
ApeKI	GCWGC	1 cut(s)	399
ApoI	RAATTY	2 cut(s)	618, 1037
Asp700I	GAANNNNTTC	1 cut(s)	1164
AspS9I	GGNCC	7 cut(s)	131, 272, 341, 423, 578, 601, 648
AsuC2I	CCSGG	2 cut(s)	577, 600
AsuHPI	GGTGA	1 cut(s)	799
AsuNHI	GCTAGC	1 cut(s)	850
AvaII	GGWCC	4 cut(s)	272, 341, 423, 648
AxyI	CCTNAGG	1 cut(s)	546
BalI	TGGCCA	2 cut(s)	1034, 1080
BanII	GRGCYC	1 cut(s)	414
BbsI	GAAGAC	1 cut(s)	322
Bbv12I	GWGCWC	1 cut(s)	414
BbvI	GCAGC	1 cut(s)	386
BccI	CCATC	5 cut(s)	154, 698, 761, 917, 1109
BceAI	ACGGC	4 cut(s)	311, 569, 678, 738
BcgI	CGANNNNNNTGC	2 cut(s)	448, 482
BciT130I	CCWGG	3 cut(s)	129, 170, 611
BcnI	CCSGG	2 cut(s)	577, 600
BcoDI	GTCTC	3 cut(s)	18, 568, 862
BfaI	CTAG	2 cut(s)	716, 851
BfuAI	ACCTGC	2 cut(s)	200, 242
BglI	GCCNNNNNGGC	1 cut(s)	590
BglII	AGATCT	1 cut(s)	483
BisI	GCNGC	7 cut(s)	204, 250, 280, 283, 337, 400, 451
BlsI	GCNGC	7 cut(s)	205, 251, 281, 284, 338, 401, 452
Bme1390I	CCNGG	5 cut(s)	129, 170, 577, 600, 611
Bme18I	GGWCC	4 cut(s)	272, 341, 423, 648
BmgT120I	GGNCC	7 cut(s)	131, 272, 341, 423, 578, 601, 648
BmiI	GGNNCC	2 cut(s)	343, 446
BmrFI	CCNGG	5 cut(s)	129, 170, 577, 600, 611
BmsI	GCATC	2 cut(s)	291, 468
BmtI	GCTAGC	1 cut(s)	854
BoxI	GACNNNNGTC	1 cut(s)	743
BpiI	GAAGAC	1 cut(s)	322
BpuEI	CTTGAG	1 cut(s)	844
BpuMI	CCSGG	2 cut(s)	577, 600
Bsa29I	ATCGAT	1 cut(s)	1129
BsaHI	GRCGYC	1 cut(s)	285
BsaI	GGTCTC	1 cut(s)	568
BsaJI	CCNNGG	5 cut(s)	127, 426, 534, 610, 1004
BsaWI	WCCGGW	3 cut(s)	269, 420, 674
BsaXI	ACNNNNNCTCC	1 cut(s)	28
Bsc4I	CCNNNNNNNGG	7 cut(s)	128, 169, 281, 427, 610, 1151, 1195
Bse118I	RCCGGY	1 cut(s)	580
Bse1I	ACTGG	1 cut(s)	391
Bse21I	CCTNAGG	1 cut(s)	546
Bse3DI	GCAATG	1 cut(s)	773
BseBI	CCWGG	3 cut(s)	129, 170, 611
BseCI	ATCGAT	1 cut(s)	1129
BseDI	CCNNGG	5 cut(s)	127, 426, 534, 610, 1004
BseGI	GGATG	3 cut(s)	146, 772, 1120
BseLI	CCNNNNNNNGG	7 cut(s)	128, 169, 281, 427, 610, 1151, 1195
BseMI	GCAATG	1 cut(s)	773
BseMII	CTCAG	1 cut(s)	918
BseNI	ACTGG	1 cut(s)	391
BseRI	GAGGAG	8 cut(s)	6, 9, 12, 15, 152, 805, 810, 1170
BseX3I	CGGCCG	1 cut(s)	582
BseXI	GCAGC	1 cut(s)	386
Bsh1236I	CGCG	3 cut(s)	225, 279, 453
Bsh1285I	CGRYCG	3 cut(s)	388, 457, 585
BshFI	GGCC	6 cut(s)	132, 580, 584, 603, 1034, 1080
BshVI	ATCGAT	1 cut(s)	1129
BsiEI	CGRYCG	3 cut(s)	388, 457, 585
BsiHKAI	GWGCWC	1 cut(s)	414
BsiSI	CCGG	7 cut(s)	216, 270, 421, 576, 581, 599, 675
BslFI	GGGAC	3 cut(s)	379, 564, 751
BslI	CCNNNNNNNGG	7 cut(s)	128, 169, 281, 427, 610, 1151, 1195
BsmAI	GTCTC	3 cut(s)	18, 568, 862
BsmFI	GGGAC	3 cut(s)	379, 564, 751
BsnI	GGCC	6 cut(s)	132, 580, 584, 603, 1034, 1080
Bso31I	GGTCTC	1 cut(s)	568
Bsp1286I	GDGCHC	1 cut(s)	414
Bsp143I	GATC	5 cut(s)	375, 385, 483, 908, 926
BspANI	GGCC	6 cut(s)	132, 580, 584, 603, 1034, 1080
BspCNI	CTCAG	1 cut(s)	917
BspDI	ATCGAT	1 cut(s)	1129
BspFNI	CGCG	3 cut(s)	225, 279, 453
BspHI	TCATGA	2 cut(s)	372, 700
BspLI	GGNNCC	2 cut(s)	343, 446
BspMI	ACCTGC	2 cut(s)	200, 242
BspOI	GCTAGC	1 cut(s)	854
BspPI	GGATC	2 cut(s)	916, 934
BspQI	GCTCTTC	1 cut(s)	311
BspTNI	GGTCTC	1 cut(s)	568
BsrDI	GCAATG	1 cut(s)	773
BsrFI	RCCGGY	1 cut(s)	580
BsrI	ACTGG	1 cut(s)	391
BssAI	RCCGGY	1 cut(s)	580
BssECI	CCNNGG	5 cut(s)	127, 426, 534, 610, 1004
BssMI	GATC	5 cut(s)	375, 385, 483, 908, 926
BssNI	GRCGYC	1 cut(s)	285
BssT1I	CCWWGG	1 cut(s)	1004
Bst2UI	CCWGG	3 cut(s)	129, 170, 611
Bst4CI	ACNGT	6 cut(s)	535, 555, 821, 877, 1062, 1096
Bst6I	CTCTTC	2 cut(s)	311, 838
BstACI	GRCGYC	1 cut(s)	285
BstC8I	GCNNGC	7 cut(s)	359, 410, 582, 591, 685, 852, 1046
BstDEI	CTNAG	2 cut(s)	546, 904
BstDSI	CCRYGG	1 cut(s)	534
BstENI	CCTNNNNNAGG	1 cut(s)	608
BstF5I	GGATG	3 cut(s)	146, 772, 1120
BstFNI	CGCG	3 cut(s)	225, 279, 453
BstKTI	GATC	5 cut(s)	378, 388, 486, 911, 929
BstMAI	GTCTC	3 cut(s)	18, 568, 862
BstMBI	GATC	5 cut(s)	375, 385, 483, 908, 926
BstMCI	CGRYCG	3 cut(s)	388, 457, 585
BstMWI	GCNNNNNNNGC	8 cut(s)	258, 396, 405, 456, 586, 590, 689, 806
BstNI	CCWGG	3 cut(s)	129, 170, 611
BstPAI	GACNNNNGTC	1 cut(s)	743
BstSCI	CCNGG	5 cut(s)	127, 168, 575, 598, 609
BstUI	CGCG	3 cut(s)	225, 279, 453
BstV1I	GCAGC	1 cut(s)	386
BstV2I	GAAGAC	1 cut(s)	322
BstX2I	RGATCY	2 cut(s)	483, 908
BstYI	RGATCY	2 cut(s)	483, 908
BstZI	CGGCCG	1 cut(s)	582
Bsu15I	ATCGAT	1 cut(s)	1129
Bsu36I	CCTNAGG	1 cut(s)	546
BsuRI	GGCC	6 cut(s)	132, 580, 584, 603, 1034, 1080
BsuTUI	ATCGAT	1 cut(s)	1129
BtgI	CCRYGG	1 cut(s)	534
BtgZI	GCGATG	1 cut(s)	653
BtsCI	GGATG	3 cut(s)	146, 772, 1120
BtsI	GCAGTG	2 cut(s)	310, 837
BtsIMutI	CAGTG	4 cut(s)	310, 837, 895, 1035
BveI	ACCTGC	2 cut(s)	200, 242
Cac8I	GCNNGC	7 cut(s)	359, 410, 582, 591, 685, 852, 1046
CciI	TCATGA	2 cut(s)	372, 700
Cfr10I	RCCGGY	1 cut(s)	580
Cfr13I	GGNCC	7 cut(s)	131, 272, 341, 423, 578, 601, 648
ClaI	ATCGAT	1 cut(s)	1129
CpoI	CGGWCCG	1 cut(s)	423
CseI	GACGC	3 cut(s)	214, 274, 391
Csp6I	GTAC	5 cut(s)	771, 873, 936, 1058, 1063
CspI	CGGWCCG	1 cut(s)	423
CviAII	CATG	5 cut(s)	373, 701, 881, 930, 1111
CviQI	GTAC	5 cut(s)	771, 873, 936, 1058, 1063
DdeI	CTNAG	2 cut(s)	546, 904
DpnI	GATC	5 cut(s)	377, 387, 485, 910, 928
DpnII	GATC	5 cut(s)	375, 385, 483, 908, 926
DrdI	GACNNNNNNGTC	2 cut(s)	10, 461
DseDI	GACNNNNNNGTC	2 cut(s)	10, 461
EaeI	YGGCCR	3 cut(s)	582, 1032, 1078
EagI	CGGCCG	1 cut(s)	582
Eam1104I	CTCTTC	2 cut(s)	311, 838
EarI	CTCTTC	2 cut(s)	311, 838
EciI	GGCGGA	5 cut(s)	76, 190, 236, 354, 437
Ecl136II	GAGCTC	1 cut(s)	412
EclXI	CGGCCG	1 cut(s)	582
Eco130I	CCWWGG	1 cut(s)	1004
Eco24I	GRGCYC	1 cut(s)	414
Eco31I	GGTCTC	1 cut(s)	568
Eco47I	GGWCC	4 cut(s)	272, 341, 423, 648
Eco52I	CGGCCG	1 cut(s)	582
Eco53kI	GAGCTC	1 cut(s)	412
Eco81I	CCTNAGG	1 cut(s)	546
EcoICRI	GAGCTC	1 cut(s)	412
EcoNI	CCTNNNNNAGG	1 cut(s)	608
EcoRII	CCWGG	3 cut(s)	127, 168, 609
EcoT14I	CCWWGG	1 cut(s)	1004
EcoT38I	GRGCYC	1 cut(s)	414
ErhI	CCWWGG	1 cut(s)	1004
FaeI	CATG	5 cut(s)	376, 704, 884, 933, 1114
FaiI	YATR	7 cut(s)	374, 570, 659, 702, 882, 931, 1112
FalI	AAGNNNNNCTT	2 cut(s)	984, 1016
FaqI	GGGAC	3 cut(s)	379, 564, 751
FatI	CATG	5 cut(s)	372, 700, 880, 929, 1110
FauI	CCCGC	3 cut(s)	88, 366, 404
FblI	GTMKAC	2 cut(s)	228, 492
Fnu4HI	GCNGC	7 cut(s)	204, 250, 280, 283, 337, 400, 451
FokI	GGATG	3 cut(s)	133, 779, 1127
FriOI	GRGCYC	1 cut(s)	414
FseI	GGCCGGCC	1 cut(s)	584
Fsp4HI	GCNGC	7 cut(s)	204, 250, 280, 283, 337, 400, 451
FspBI	CTAG	2 cut(s)	716, 851
GluI	GCNGC	7 cut(s)	204, 250, 280, 283, 337, 400, 451
HaeIII	GGCC	6 cut(s)	132, 580, 584, 603, 1034, 1080
HapII	CCGG	7 cut(s)	216, 270, 421, 576, 581, 599, 675
HgaI	GACGC	3 cut(s)	214, 274, 391
Hin1I	GRCGYC	1 cut(s)	285
Hin1II	CATG	5 cut(s)	376, 704, 884, 933, 1114
HincII	GTYRAC	1 cut(s)	901
HindII	GTYRAC	1 cut(s)	901
HinfI	GANTC	7 cut(s)	142, 212, 291, 521, 739, 902, 1165
HpaII	CCGG	7 cut(s)	216, 270, 421, 576, 581, 599, 675
HphI	GGTGA	1 cut(s)	799
Hpy166II	GTNNAC	5 cut(s)	229, 275, 493, 901, 1058
Hpy188I	TCNGA	7 cut(s)	30, 94, 290, 427, 749, 943, 1021
Hpy188III	TCNNGA	4 cut(s)	298, 373, 701, 906
Hpy8I	GTNNAC	5 cut(s)	229, 275, 493, 901, 1058
Hpy99I	CGWCG	5 cut(s)	290, 386, 467, 470, 724
HpyAV	CCTTC	3 cut(s)	253, 1010, 1046
HpyCH4III	ACNGT	6 cut(s)	535, 555, 821, 877, 1062, 1096
HpyCH4V	TGCA	2 cut(s)	933, 1048
HpyF10VI	GCNNNNNNNGC	8 cut(s)	258, 396, 405, 456, 586, 590, 689, 806
HpyF3I	CTNAG	2 cut(s)	546, 904
Hsp92I	GRCGYC	1 cut(s)	285
Hsp92II	CATG	5 cut(s)	376, 704, 884, 933, 1114
KroI	GCCGGC	1 cut(s)	580
KroNI	GCCGGC	1 cut(s)	582
Kzo9I	GATC	5 cut(s)	375, 385, 483, 908, 926
LguI	GCTCTTC	1 cut(s)	311
LmnI	GCTCC	6 cut(s)	58, 450, 677, 783, 797, 1119
Lsp1109I	GCAGC	1 cut(s)	386
LweI	GCATC	2 cut(s)	291, 468
MaeI	CTAG	2 cut(s)	716, 851
MaeIII	GTNAC	3 cut(s)	109, 529, 863
MalI	GATC	5 cut(s)	377, 387, 485, 910, 928
MboI	GATC	5 cut(s)	375, 385, 483, 908, 926
MboII	GAAGA	5 cut(s)	298, 322, 478, 825, 1099
MflI	RGATCY	2 cut(s)	483, 908
MhlI	GDGCHC	1 cut(s)	414
MlsI	TGGCCA	2 cut(s)	1034, 1080
MluCI	AATT	5 cut(s)	618, 945, 958, 1037, 1183
MluNI	TGGCCA	2 cut(s)	1034, 1080
MlyI	GAGTC	4 cut(s)	136, 206, 733, 896
MmeI	TCCRAC	2 cut(s)	268, 498
Mox20I	TGGCCA	2 cut(s)	1034, 1080
MroNI	GCCGGC	1 cut(s)	580
MroXI	GAANNNNTTC	1 cut(s)	1164
MscI	TGGCCA	2 cut(s)	1034, 1080
Msp20I	TGGCCA	2 cut(s)	1034, 1080
MspA1I	CMGCKG	1 cut(s)	399
MspI	CCGG	7 cut(s)	216, 270, 421, 576, 581, 599, 675
MspR9I	CCNGG	5 cut(s)	129, 170, 577, 600, 611
MvaI	CCWGG	3 cut(s)	129, 170, 611
MvnI	CGCG	3 cut(s)	225, 279, 453
MwoI	GCNNNNNNNGC	8 cut(s)	258, 396, 405, 456, 586, 590, 689, 806
NaeI	GCCGGC	1 cut(s)	582
NciI	CCSGG	2 cut(s)	577, 600
NdeII	GATC	5 cut(s)	375, 385, 483, 908, 926
NgoMIV	GCCGGC	1 cut(s)	580
NheI	GCTAGC	1 cut(s)	850
NlaIII	CATG	5 cut(s)	376, 704, 884, 933, 1114
NlaIV	GGNNCC	2 cut(s)	343, 446
NmuCI	GTSAC	2 cut(s)	529, 863
PagI	TCATGA	2 cut(s)	372, 700
PaqCI	CACCTGC	2 cut(s)	200, 242
PciSI	GCTCTTC	1 cut(s)	311
PdiI	GCCGGC	1 cut(s)	582
PdmI	GAANNNNTTC	1 cut(s)	1164
PfeI	GAWTC	3 cut(s)	291, 521, 1165
PkrI	GCNGC	7 cut(s)	205, 251, 281, 284, 338, 401, 452
Ple19I	CGATCG	1 cut(s)	388
PleI	GAGTC	4 cut(s)	136, 206, 733, 896
PpsI	GAGTC	4 cut(s)	136, 206, 733, 896
PshAI	GACNNNNGTC	1 cut(s)	743
PsiI	TTATAA	1 cut(s)	659
Psp124BI	GAGCTC	1 cut(s)	414
Psp6I	CCWGG	3 cut(s)	127, 168, 609
PspGI	CCWGG	3 cut(s)	127, 168, 609
PspN4I	GGNNCC	2 cut(s)	343, 446
PspPI	GGNCC	7 cut(s)	131, 272, 341, 423, 578, 601, 648
PsuI	RGATCY	2 cut(s)	483, 908
PvuI	CGATCG	1 cut(s)	388
RigI	GGCCGGCC	1 cut(s)	584
RsaI	GTAC	5 cut(s)	772, 874, 937, 1059, 1064
RsaNI	GTAC	5 cut(s)	771, 873, 936, 1058, 1063
Rsr2I	CGGWCCG	1 cut(s)	423
RsrII	CGGWCCG	1 cut(s)	423
SacI	GAGCTC	1 cut(s)	414
SapI	GCTCTTC	1 cut(s)	311
SatI	GCNGC	7 cut(s)	204, 250, 280, 283, 337, 400, 451
Sau3AI	GATC	5 cut(s)	375, 385, 483, 908, 926
Sau96I	GGNCC	7 cut(s)	131, 272, 341, 423, 578, 601, 648
SchI	GAGTC	4 cut(s)	136, 206, 733, 896
ScrFI	CCNGG	5 cut(s)	129, 170, 577, 600, 611
SduI	GDGCHC	1 cut(s)	414
SfaNI	GCATC	2 cut(s)	291, 468
SinI	GGWCC	4 cut(s)	272, 341, 423, 648
SmlI	CTYRAG	1 cut(s)	859
SmoI	CTYRAG	1 cut(s)	859
Sse9I	AATT	5 cut(s)	618, 945, 958, 1037, 1183
SspI	AATATT	1 cut(s)	1178
SspMI	CTAG	2 cut(s)	716, 851
SstI	GAGCTC	1 cut(s)	414
StyD4I	CCNGG	5 cut(s)	127, 168, 575, 598, 609
StyI	CCWWGG	1 cut(s)	1004
TaaI	ACNGT	6 cut(s)	535, 555, 821, 877, 1062, 1096
TaqI	TCGA	4 cut(s)	524, 627, 641, 1129
TaqII	GACCGA	1 cut(s)	427
TasI	AATT	5 cut(s)	618, 945, 958, 1037, 1183
TatI	WGTACW	1 cut(s)	935
TauI	GCSGC	6 cut(s)	206, 252, 282, 285, 339, 453
TfiI	GAWTC	3 cut(s)	291, 521, 1165
TscAI	CASTG	4 cut(s)	317, 844, 895, 1035
TseFI	GTSAC	2 cut(s)	529, 863
TseI	GCWGC	1 cut(s)	399
Tsp45I	GTSAC	2 cut(s)	529, 863
TspDTI	ATGAA	2 cut(s)	951, 963
TspGWI	ACGGA	1 cut(s)	97
TspRI	CASTG	4 cut(s)	317, 844, 895, 1035
VpaK11BI	GGWCC	4 cut(s)	272, 341, 423, 648
XagI	CCTNNNNNAGG	1 cut(s)	608
XapI	RAATTY	2 cut(s)	618, 1037
XmiI	GTMKAC	2 cut(s)	228, 492
XmnI	GAANNNNTTC	1 cut(s)	1164
XspI	CTAG	2 cut(s)	716, 851

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.