Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0010218

Physical Location & Seq

Genomic Coordinates Reverse (-)

4144061 .. 4150292

Gene Structure 6232 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g06870.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2310 bp

ATGTCGTCGCGTAACTCCAGCAACATGTCCACGACCAGAACTCTCAGCGGAATATCCGAAATGGACGCCTTGAAACTCGGCTTGGATCTCGTGTCCGCCGCCAGGCGAAACCTGGGGTTCCTCCGAACTGTGGCTGAGTCTAGGTGGCTGCACCCGAAGGCGACGCTTGTTGAAGCCATAAGAAGGTACAGTGAGCTCTGGTTGCCGTTGATGGCTCATTTGACGGCGGAGTCAACGTCAATGACGACTCCGGTGGTTCATCCTCCCATTGATATTGAGTGGGTTTGGTTATGTCACACACTTAATCCGGTTCATTATAGGCACTACTGTGAGTCCAGGTTTTCAAGACTTATAGGAAAGCCCACCATTTTTGATGAAGAGAATGAAGAGTATGCATTAATGAGGTGCAGAGATTTTTGGGTCAAAATGTACCCAGATGAGCCATTTGAGAATGAATGTGATTCTGATGTGGGGGTATCAGATGTAGCTATTGATGAGGAGCTATTGGAGGAAGTGAGCAAGCATAGGTTTTTGTATTCGAAATTTTCAGAGCCATACAGGTCAGAGATTGTGTATTTGATAGCAGCAAGGCAAAGGTACAAGGGGTTTTTGTTCATGGTGCAGAGGTCTACTGATTTGGCTTCAAATTTGGTTCCTACCTCGGACATTATGCTAATGTGGCTCATCCATCAGAGTTATCCAACTGTATATGCTGAAGATTTGAAAGAGGTGGCGGGTGATTTGGTTAAAGTGTTGACTGTGTGGGACAAAGTCAAGGAAAAAGAGGTGGAGGAGACCAAGAAGTTGTGGGAGAGGACTTTTGATCAACCATATGAGAAAGCTGGTGGGGAAATAGCTTTGACAATGGATGGGGGTGTCTCATTTAAACCACCGGTTTACTGGGAGGTATCAGATACAGATGTCAATACCAAATACAAGCCCCTGCTGCCTAGGTTCTTGCTTGAGGTCTGTGTGTTTGTCAGGCTTAGGGATAAAATGAAGGCTATGCAGGAGAATATAAAACGTGATAACCTTCGTCTTCGAATGGTTAGGTGTCATAGGGAATTAAAGCTTGGAAAACCCATGTCCGACTTTTCTCATCTGTCATGGCGAAAAGCTTGGCATCTCTATTGTGAGTTTGGAACCAAAGGAGTAATGGTGGAGCTTCGTCAGCGTGGTGGCTACTGTTTTAAAGGAAATAGTGTGCAAGACACCGTTACATTCTGTTGGAATGACTTACTGAGAGCACCCTCTCTGTCTTTGGAGAGAGAAGATGATGAAGTGAAAATTGTTACTTCGATAACTCCACCAGTTCAGGCACCGTACCTAATGAAATGTGTGCCAGATCGTGTCACAGATGATTCCGGGGCAATGATATCAGATGTGATTCTGAGAATGAACCAGTATCGTCCCCAAGAAGGACGATGGTTGTCACGCACTGTGCTTGATCATGCAGGGAGAGAGTGTTTTGTGATTAGAATAAGGGTGGGAGAAGGATTTTGGAGGAGAGGAGGCGAAGCTCCCTCAGCTGTGAAATGGGAGGATAGGATTATAGAGATTCGAGAAGGTTCTTGGTCGTATGTTGCGGGTTCAATTGGTAGATCCCCTGTGAAAATGGTTGGAACTGCTTTACCAAAAGAGCCAGAGGAACAATGGAAAGCTGCATGGCACTTTTCAACAGGAGATGAATTAATGATAGGGGGATTGCCATCGTCAGTTTCAGGTCTGAGATTTTTTTTGAAAAATCAATCTGCTGAATCAACGGGTAAGCTCTTGAAAGGACGAAGGATGCAATATCAAGTAAAAAAGAAAGGGTCTGTAACTAAGGATGAGGGATGTCAAGTTTATGAAGAAAGTGAAGAGGTGGAAGAGGAAGATGAAGAAGAGGGGTTTTTAACCCTTGTCAGGATCACTGAAGAGGATCCAAATGGAAGAGCAACGGCTCTTTTGAATTGGAAGTTATTGGTAGTGGAGTTACTGCCTGAAGAAGATGCAGTATTTGTACTTCTTCTATGCATTTGTATACTAAGAAGTGTATCGGAAATGAAAAAAGAAGATATTGGAGGTCTGTTGATTAGAAGAAGACTAAAGGAAGACAAATTTGGGACCAGAGATTGGGGTTCTGTTGCACTCCACCCTTCATCAAGTTCATCGTATTCTTCACCTCACCTTGAACCTTGGTATTGGAATGCAAAGGCAATTATAAAGTCAGAGGGTTCCAGTAACATTAGCAGGCAACCATCTATTACCGTGGGCTATTCACCGGAGGAAGGCGGTGATAAGTTGTACAGACGGGGGATACTAGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRDP-like

Protein Analysis

770

Amino Acids

88.34

Weight (kDa)

6.05

Isoelectric Point (pI)

54.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRDP-like	PF07173	23 - 107	3.8e-06	Glycine-rich domain-containing protein-like
GRDP-like	PF07173	105 - 240	3.5e-40	Glycine-rich domain-containing protein-like
GRDP_C	PF25335	481 - 658	1.2e-46	Glycine Rich Domain Protein C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010218)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G56230 AT1G56230 AT1G56230 AT1G56230
fragaria_vesca	FvH4_6g06870
malus_domestica	MD04G1197900.v1.1
prunus_persica	Prupe.6G318400_v2.0.a1 Prupe.6G318400_v2.0.a1
pyrus_communis	pycom04g17510
rosa_chinensis	RchiOBHm_Chr3g0456361
rosa_laevigata	RLG00000025309
rosa_multiflora	Rmu_sc0002607.1_g000019 Rmu_sc0018054.1_g000001
rosa_roxburghii	Rroxscaffold_6G00422780
rosa_rugosa	Rorug03G0012700 Rorug03G0012700
rosa_samantha	Rh3AG072900 Rh3BG075000 Rh3CG074600 Rh3DG076400
rosa_wichuraiana	Rw3G006260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2204
AasI	GACNNNNNNGTC	1 cut(s)	229
AccB1I	GGYRCC	1 cut(s)	1318
AccB7I	CCANNNNNTGG	1 cut(s)	2115
AccI	GTMKAC	2 cut(s)	629, 2023
AccII	CGCG	1 cut(s)	10
AciI	CCGC	7 cut(s)	48, 96, 99, 227, 734, 1586, 2274
AclWI	GGATC	5 cut(s)	93, 1596, 1916, 1916, 1929
AcsI	RAATTY	3 cut(s)	542, 646, 2099
AcuI	CTGAAG	3 cut(s)	735, 1935, 2004
AcyI	GRCGYC	1 cut(s)	66
AfaI	GTAC	6 cut(s)	188, 431, 599, 1325, 2004, 2288
AfiI	CCNNNNNNNGG	7 cut(s)	102, 130, 183, 1418, 1905, 2115, 2270
AflIII	ACRYGT	1 cut(s)	24
AgeI	ACCGGT	1 cut(s)	892
AjnI	CCWGG	3 cut(s)	101, 111, 335
AjuI	GAANNNNNNNTTGG	6 cut(s)	65, 97, 1056, 1088, 2085, 2117
AleI	CACNNNNGTG	1 cut(s)	327
Alw21I	GWGCWC	2 cut(s)	198, 1249
Alw26I	GTCTC	2 cut(s)	788, 883
AlwI	GGATC	5 cut(s)	93, 1596, 1916, 1916, 1929
ApeKI	GCWGC	4 cut(s)	148, 584, 946, 1661
ApoI	RAATTY	3 cut(s)	542, 646, 2099
AseI	ATTAAT	2 cut(s)	398, 1691
AsiGI	ACCGGT	1 cut(s)	892
AspA2I	CCTAGG	1 cut(s)	950
AspS9I	GGNCC	1 cut(s)	2106
AsuC2I	CCSGG	1 cut(s)	1366
AsuHPI	GGTGA	5 cut(s)	749, 2154, 2159, 2253, 2288
AsuII	TTCGAA	2 cut(s)	539, 1042
AvaII	GGWCC	1 cut(s)	2106
AvrII	CCTAGG	1 cut(s)	950
BaeI	ACNNNNGTAYC	2 cut(s)	906, 939
BamHI	GGATCC	1 cut(s)	1921
BanI	GGYRCC	1 cut(s)	1318
BanII	GRGCYC	1 cut(s)	198
BarI	GAAGNNNNNNTAC	2 cut(s)	1989, 2021
BauI	CACGAG	1 cut(s)	89
BbsI	GAAGAC	3 cut(s)	1031, 2089, 2100
Bbv12I	GWGCWC	2 cut(s)	198, 1249
BbvCI	CCTCAGC	1 cut(s)	1525
BbvI	GCAGC	4 cut(s)	135, 596, 933, 1648
BccI	CCATC	6 cut(s)	205, 696, 863, 1419, 1717, 2248
BceAI	ACGGC	3 cut(s)	190, 240, 1956
BciT130I	CCWGG	3 cut(s)	103, 113, 337
BciVI	GTATCC	1 cut(s)	2292
BclI	TGATCA	2 cut(s)	823, 1447
BcnI	CCSGG	1 cut(s)	1366
BcoDI	GTCTC	2 cut(s)	788, 883
BfaI	CTAG	3 cut(s)	141, 951, 2303
BfuI	GTATCC	1 cut(s)	2292
BisI	GCNGC	5 cut(s)	99, 149, 585, 947, 1662
BlnI	CCTAGG	1 cut(s)	950
BlsI	GCNGC	5 cut(s)	100, 150, 586, 948, 1663
Bme1390I	CCNGG	4 cut(s)	103, 113, 337, 1366
Bme18I	GGWCC	1 cut(s)	2106
BmgT120I	GGNCC	1 cut(s)	2106
BmiI	GGNNCC	7 cut(s)	119, 654, 1144, 1320, 1923, 2107, 2218
BmrFI	CCNGG	4 cut(s)	103, 113, 337, 1366
BmrI	ACTGGG	1 cut(s)	910
BmsI	GCATC	3 cut(s)	1132, 1779, 1981
BmuI	ACTGGG	1 cut(s)	910
BpiI	GAAGAC	3 cut(s)	1031, 2089, 2100
Bpu10I	CCTNAGC	2 cut(s)	986, 1525
Bpu14I	TTCGAA	2 cut(s)	539, 1042
BpuEI	CTTGAG	1 cut(s)	983
BpuMI	CCSGG	1 cut(s)	1366
BsaBI	GATNNNNATC	1 cut(s)	1708
BsaHI	GRCGYC	1 cut(s)	66
BsaI	GGTCTC	1 cut(s)	788
BsaJI	CCNNGG	6 cut(s)	112, 660, 950, 1365, 2177, 2250
BsaWI	WCCGGW	4 cut(s)	250, 307, 892, 2263
BsaXI	ACNNNNNCTCC	6 cut(s)	221, 251, 1143, 1173, 1450, 1480
Bsc4I	CCNNNNNNNGG	7 cut(s)	102, 130, 183, 1418, 1905, 2115, 2270
Bse118I	RCCGGY	1 cut(s)	892
Bse1I	ACTGG	4 cut(s)	905, 1310, 1402, 2220
Bse3DI	GCAATG	1 cut(s)	1377
Bse8I	GATNNNNATC	1 cut(s)	1708
BseBI	CCWGG	3 cut(s)	103, 113, 337
BseDI	CCNNGG	6 cut(s)	112, 660, 950, 1365, 2177, 2250
BseGI	GGATG	6 cut(s)	259, 684, 874, 1794, 1834, 1841
BseJI	GATNNNNATC	1 cut(s)	1708
BseLI	CCNNNNNNNGG	7 cut(s)	102, 130, 183, 1418, 1905, 2115, 2270
BseMI	GCAATG	1 cut(s)	1377
BseMII	CTCAG	6 cut(s)	58, 126, 1232, 1382, 1539, 1718
BseNI	ACTGG	4 cut(s)	905, 1310, 1402, 2220
BseRI	GAGGAG	4 cut(s)	512, 806, 1519, 1524
BseXI	GCAGC	4 cut(s)	135, 596, 933, 1648
BsgI	GTGCAG	3 cut(s)	134, 427, 641
Bsh1236I	CGCG	1 cut(s)	10
BshNI	GGYRCC	1 cut(s)	1318
BshTI	ACCGGT	1 cut(s)	892
BsiHKAI	GWGCWC	2 cut(s)	198, 1249
BsiSI	CCGG	5 cut(s)	251, 308, 893, 1365, 2264
BslFI	GGGAC	3 cut(s)	779, 1395, 2119
BslI	CCNNNNNNNGG	7 cut(s)	102, 130, 183, 1418, 1905, 2115, 2270
BsmAI	GTCTC	2 cut(s)	788, 883
BsmFI	GGGAC	3 cut(s)	779, 1395, 2119
BsmI	GAATGC	1 cut(s)	2194
Bso31I	GGTCTC	1 cut(s)	788
Bsp119I	TTCGAA	2 cut(s)	539, 1042
Bsp1286I	GDGCHC	2 cut(s)	198, 1249
Bsp1407I	TGTACA	1 cut(s)	2286
Bsp143I	GATC	7 cut(s)	85, 823, 1345, 1447, 1601, 1908, 1921
BspACI	CCGC	7 cut(s)	48, 96, 99, 227, 734, 1586, 2274
BspCNI	CTCAG	6 cut(s)	57, 127, 1233, 1383, 1538, 1719
BspFNI	CGCG	1 cut(s)	10
BspLI	GGNNCC	7 cut(s)	119, 654, 1144, 1320, 1923, 2107, 2218
BspPI	GGATC	5 cut(s)	93, 1596, 1916, 1916, 1929
BspQI	GCTCTTC	1 cut(s)	1927
BspT104I	TTCGAA	2 cut(s)	539, 1042
BspT107I	GGYRCC	1 cut(s)	1318
BspTNI	GGTCTC	1 cut(s)	788
BsrDI	GCAATG	1 cut(s)	1377
BsrFI	RCCGGY	1 cut(s)	892
BsrGI	TGTACA	1 cut(s)	2286
BsrI	ACTGG	4 cut(s)	905, 1310, 1402, 2220
BssAI	RCCGGY	1 cut(s)	892
BssECI	CCNNGG	6 cut(s)	112, 660, 950, 1365, 2177, 2250
BssMI	GATC	7 cut(s)	85, 823, 1345, 1447, 1601, 1908, 1921
BssNAI	GTATAC	1 cut(s)	2024
BssNI	GRCGYC	1 cut(s)	66
BssSI	CACGAG	1 cut(s)	89
BssT1I	CCWWGG	2 cut(s)	950, 2177
Bst1107I	GTATAC	1 cut(s)	2024
Bst2BI	CACGAG	1 cut(s)	89
Bst2UI	CCWGG	3 cut(s)	103, 113, 337
Bst6I	CTCTTC	7 cut(s)	372, 381, 1854, 1863, 1878, 1911, 1927
BstACI	GRCGYC	1 cut(s)	66
BstAUI	TGTACA	1 cut(s)	2286
BstBI	TTCGAA	2 cut(s)	539, 1042
BstC8I	GCNNGC	2 cut(s)	521, 2234
BstDEI	CTNAG	9 cut(s)	44, 135, 986, 1241, 1391, 1525, 1727, 1824, 2027
BstDSI	CCRYGG	1 cut(s)	2250
BstF5I	GGATG	6 cut(s)	259, 684, 874, 1794, 1834, 1841
BstFNI	CGCG	1 cut(s)	10
BstKTI	GATC	7 cut(s)	88, 826, 1348, 1450, 1604, 1911, 1924
BstMAI	GTCTC	2 cut(s)	788, 883
BstMBI	GATC	7 cut(s)	85, 823, 1345, 1447, 1601, 1908, 1921
BstMWI	GCNNNNNNNGC	5 cut(s)	202, 679, 946, 1171, 1526
BstNI	CCWGG	3 cut(s)	103, 113, 337
BstNSI	RCATGY	1 cut(s)	28
BstSCI	CCNGG	4 cut(s)	101, 111, 335, 1364
BstUI	CGCG	1 cut(s)	10
BstV1I	GCAGC	4 cut(s)	135, 596, 933, 1648
BstV2I	GAAGAC	3 cut(s)	1031, 2089, 2100
BstX2I	RGATCY	3 cut(s)	85, 1601, 1921
BstYI	RGATCY	3 cut(s)	85, 1601, 1921
BstZ17I	GTATAC	1 cut(s)	2024
BsuI	GTATCC	1 cut(s)	2292
BtgI	CCRYGG	1 cut(s)	2250
BtsCI	GGATG	6 cut(s)	259, 684, 874, 1794, 1834, 1841
BtsIMutI	CAGTG	3 cut(s)	196, 1437, 1911
Cac8I	GCNNGC	2 cut(s)	521, 2234
Cfr10I	RCCGGY	1 cut(s)	892
Cfr13I	GGNCC	1 cut(s)	2106
CseI	GACGC	2 cut(s)	74, 172
Csp6I	GTAC	6 cut(s)	187, 430, 598, 1324, 2003, 2287
CspAI	ACCGGT	1 cut(s)	892
CspCI	CAANNNNNGTGG	2 cut(s)	352, 387
CviAII	CATG	7 cut(s)	25, 616, 1084, 1107, 1451, 1665, 2307
CviQI	GTAC	6 cut(s)	187, 430, 598, 1324, 2003, 2287
DdeI	CTNAG	9 cut(s)	44, 135, 986, 1241, 1391, 1525, 1727, 1824, 2027
DpnI	GATC	7 cut(s)	87, 825, 1347, 1449, 1603, 1910, 1923
DpnII	GATC	7 cut(s)	85, 823, 1345, 1447, 1601, 1908, 1921
DraI	TTTAAA	2 cut(s)	886, 1192
DrdI	GACNNNNNNGTC	1 cut(s)	229
DseDI	GACNNNNNNGTC	1 cut(s)	229
Eam1104I	CTCTTC	7 cut(s)	372, 381, 1854, 1863, 1878, 1911, 1927
EarI	CTCTTC	7 cut(s)	372, 381, 1854, 1863, 1878, 1911, 1927
EciI	GGCGGA	2 cut(s)	85, 242
Ecl136II	GAGCTC	1 cut(s)	196
Eco130I	CCWWGG	2 cut(s)	950, 2177
Eco24I	GRGCYC	1 cut(s)	198
Eco31I	GGTCTC	1 cut(s)	788
Eco32I	GATATC	1 cut(s)	1377
Eco47I	GGWCC	1 cut(s)	2106
Eco53kI	GAGCTC	1 cut(s)	196
Eco57I	CTGAAG	3 cut(s)	735, 1935, 2004
EcoICRI	GAGCTC	1 cut(s)	196
EcoRII	CCWGG	3 cut(s)	101, 111, 335
EcoRV	GATATC	1 cut(s)	1377
EcoT14I	CCWWGG	2 cut(s)	950, 2177
EcoT22I	ATGCAT	2 cut(s)	397, 2018
EcoT38I	GRGCYC	1 cut(s)	198
ErhI	CCWWGG	2 cut(s)	950, 2177
FaeI	CATG	7 cut(s)	28, 619, 1087, 1110, 1454, 1668, 2310
FaqI	GGGAC	3 cut(s)	779, 1395, 2119
FatI	CATG	7 cut(s)	24, 615, 1083, 1106, 1450, 1664, 2306
FauI	CCCGC	2 cut(s)	727, 1579
FauNDI	CATATG	1 cut(s)	832
FbaI	TGATCA	2 cut(s)	823, 1447
FblI	GTMKAC	2 cut(s)	629, 2023
Fnu4HI	GCNGC	5 cut(s)	99, 149, 585, 947, 1662
FokI	GGATG	6 cut(s)	246, 671, 881, 1801, 1841, 1848
FriOI	GRGCYC	1 cut(s)	198
Fsp4HI	GCNGC	5 cut(s)	99, 149, 585, 947, 1662
FspBI	CTAG	3 cut(s)	141, 951, 2303
GluI	GCNGC	5 cut(s)	99, 149, 585, 947, 1662
HapII	CCGG	5 cut(s)	251, 308, 893, 1365, 2264
HgaI	GACGC	2 cut(s)	74, 172
Hin1I	GRCGYC	1 cut(s)	66
Hin1II	CATG	7 cut(s)	28, 619, 1087, 1110, 1454, 1668, 2310
HincII	GTYRAC	2 cut(s)	234, 756
HindII	GTYRAC	2 cut(s)	234, 756
HindIII	AAGCTT	2 cut(s)	1070, 1116
HinfI	GANTC	9 cut(s)	137, 230, 247, 332, 461, 1361, 1387, 1558, 1757
HpaII	CCGG	5 cut(s)	251, 308, 893, 1365, 2264
HphI	GGTGA	5 cut(s)	749, 2154, 2159, 2253, 2288
Hpy166II	GTNNAC	6 cut(s)	30, 234, 630, 756, 898, 2024
Hpy188III	TCNNGA	4 cut(s)	345, 1562, 1774, 1906
Hpy8I	GTNNAC	6 cut(s)	30, 234, 630, 756, 898, 2024
Hpy99I	CGWCG	2 cut(s)	10, 166
HpyCH4IV	ACGT	2 cut(s)	236, 1024
HpyF10VI	GCNNNNNNNGC	5 cut(s)	202, 679, 946, 1171, 1526
HpyF3I	CTNAG	9 cut(s)	44, 135, 986, 1241, 1391, 1525, 1727, 1824, 2027
HpySE526I	ACGT	2 cut(s)	236, 1024
Hsp92I	GRCGYC	1 cut(s)	66
Hsp92II	CATG	7 cut(s)	28, 619, 1087, 1110, 1454, 1668, 2310
Ksp22I	TGATCA	2 cut(s)	823, 1447
Kzo9I	GATC	7 cut(s)	85, 823, 1345, 1447, 1601, 1908, 1921
LguI	GCTCTTC	1 cut(s)	1927
LmnI	GCTCC	3 cut(s)	499, 1162, 1525
Lsp1109I	GCAGC	4 cut(s)	135, 596, 933, 1648
LweI	GCATC	3 cut(s)	1132, 1779, 1981
MaeI	CTAG	3 cut(s)	141, 951, 2303
MaeII	ACGT	2 cut(s)	236, 1024
MaeIII	GTNAC	9 cut(s)	11, 293, 1216, 1291, 1351, 1431, 1819, 1974, 2222
MalI	GATC	7 cut(s)	87, 825, 1347, 1449, 1603, 1910, 1923
MboI	GATC	7 cut(s)	85, 823, 1345, 1447, 1601, 1908, 1921
MfeI	CAATTG	1 cut(s)	1593
MflI	RGATCY	3 cut(s)	85, 1601, 1921
MhlI	GDGCHC	2 cut(s)	198, 1249
MluCI	AATT	9 cut(s)	542, 646, 1064, 1287, 1593, 1688, 1951, 2099, 2199
MlyI	GAGTC	4 cut(s)	146, 239, 241, 341
MmeI	TCCRAC	4 cut(s)	725, 1113, 1208, 1600
Mph1103I	ATGCAT	2 cut(s)	397, 2018
MseI	TTAA	8 cut(s)	303, 398, 747, 885, 1067, 1191, 1691, 1895
MslI	CAYNNNNRTG	1 cut(s)	327
MspA1I	CMGCKG	2 cut(s)	48, 1529
MspI	CCGG	5 cut(s)	251, 308, 893, 1365, 2264
MspR9I	CCNGG	4 cut(s)	103, 113, 337, 1366
MunI	CAATTG	1 cut(s)	1593
Mva1269I	GAATGC	1 cut(s)	2194
MvaI	CCWGG	3 cut(s)	103, 113, 337
MvnI	CGCG	1 cut(s)	10
MwoI	GCNNNNNNNGC	5 cut(s)	202, 679, 946, 1171, 1526
NciI	CCSGG	1 cut(s)	1366
NdeI	CATATG	1 cut(s)	832
NdeII	GATC	7 cut(s)	85, 823, 1345, 1447, 1601, 1908, 1921
NlaIII	CATG	7 cut(s)	28, 619, 1087, 1110, 1454, 1668, 2310
NlaIV	GGNNCC	7 cut(s)	119, 654, 1144, 1320, 1923, 2107, 2218
NmeAIII	GCCGAG	1 cut(s)	57
NmuCI	GTSAC	3 cut(s)	293, 1351, 1431
NsiI	ATGCAT	2 cut(s)	397, 2018
NspI	RCATGY	1 cut(s)	28
NspV	TTCGAA	2 cut(s)	539, 1042
OliI	CACNNNNGTG	1 cut(s)	327
PciI	ACATGT	1 cut(s)	24
PciSI	GCTCTTC	1 cut(s)	1927
PcsI	WCGNNNNNNNCGW	1 cut(s)	242
PctI	GAATGC	1 cut(s)	2194
PfeI	GAWTC	5 cut(s)	461, 1361, 1387, 1558, 1757
PflFI	GACNNNGTC	1 cut(s)	770
PflMI	CCANNNNNTGG	1 cut(s)	2115
PinAI	ACCGGT	1 cut(s)	892
PkrI	GCNGC	5 cut(s)	100, 150, 586, 948, 1663
PleI	GAGTC	4 cut(s)	145, 238, 241, 340
PpsI	GAGTC	4 cut(s)	145, 238, 241, 340
PscI	ACATGT	1 cut(s)	24
PshBI	ATTAAT	2 cut(s)	398, 1691
PsiI	TTATAA	1 cut(s)	2204
Psp124BI	GAGCTC	1 cut(s)	198
Psp6I	CCWGG	3 cut(s)	101, 111, 335
PspGI	CCWGG	3 cut(s)	101, 111, 335
PspN4I	GGNNCC	7 cut(s)	119, 654, 1144, 1320, 1923, 2107, 2218
PspPI	GGNCC	1 cut(s)	2106
PsuI	RGATCY	3 cut(s)	85, 1601, 1921
PsyI	GACNNNGTC	1 cut(s)	770
PvuII	CAGCTG	1 cut(s)	1529
RsaI	GTAC	6 cut(s)	188, 431, 599, 1325, 2004, 2288
RsaNI	GTAC	6 cut(s)	187, 430, 598, 1324, 2003, 2287
RseI	CAYNNNNRTG	1 cut(s)	327
SacI	GAGCTC	1 cut(s)	198
SapI	GCTCTTC	1 cut(s)	1927
SaqAI	TTAA	8 cut(s)	303, 398, 747, 885, 1067, 1191, 1691, 1895
SatI	GCNGC	5 cut(s)	99, 149, 585, 947, 1662
Sau3AI	GATC	7 cut(s)	85, 823, 1345, 1447, 1601, 1908, 1921
Sau96I	GGNCC	1 cut(s)	2106
SchI	GAGTC	4 cut(s)	146, 239, 241, 341
ScrFI	CCNGG	4 cut(s)	103, 113, 337, 1366
SduI	GDGCHC	2 cut(s)	198, 1249
SfaNI	GCATC	3 cut(s)	1132, 1779, 1981
SfuI	TTCGAA	2 cut(s)	539, 1042
SinI	GGWCC	1 cut(s)	2106
SmiMI	CAYNNNNRTG	1 cut(s)	327
SmlI	CTYRAG	1 cut(s)	962
SmoI	CTYRAG	1 cut(s)	962
Sse9I	AATT	9 cut(s)	542, 646, 1064, 1287, 1593, 1688, 1951, 2099, 2199
SsiI	CCGC	7 cut(s)	48, 96, 99, 227, 734, 1586, 2274
SspMI	CTAG	3 cut(s)	141, 951, 2303
SstI	GAGCTC	1 cut(s)	198
StyD4I	CCNGG	4 cut(s)	101, 111, 335, 1364
StyI	CCWWGG	2 cut(s)	950, 2177
TaiI	ACGT	2 cut(s)	239, 1027
TaqI	TCGA	4 cut(s)	539, 1042, 1298, 1561
TasI	AATT	9 cut(s)	542, 646, 1064, 1287, 1593, 1688, 1951, 2099, 2199
TatI	WGTACW	2 cut(s)	2002, 2286
TauI	GCSGC	1 cut(s)	101
TfiI	GAWTC	5 cut(s)	461, 1361, 1387, 1558, 1757
Tru1I	TTAA	8 cut(s)	303, 398, 747, 885, 1067, 1191, 1691, 1895
Tru9I	TTAA	8 cut(s)	303, 398, 747, 885, 1067, 1191, 1691, 1895
TscAI	CASTG	3 cut(s)	196, 1444, 1918
TseFI	GTSAC	3 cut(s)	293, 1351, 1431
TseI	GCWGC	4 cut(s)	148, 584, 946, 1661
Tsp45I	GTSAC	3 cut(s)	293, 1351, 1431
TspRI	CASTG	3 cut(s)	196, 1444, 1918
Tth111I	GACNNNGTC	1 cut(s)	770
Van91I	CCANNNNNTGG	1 cut(s)	2115
VpaK11BI	GGWCC	1 cut(s)	2106
VspI	ATTAAT	2 cut(s)	398, 1691
XapI	RAATTY	3 cut(s)	542, 646, 2099
XceI	RCATGY	1 cut(s)	28
XcmI	CCANNNNNNNNNTGG	4 cut(s)	109, 897, 1153, 1650
XmaJI	CCTAGG	1 cut(s)	950
XmiI	GTMKAC	2 cut(s)	629, 2023
XspI	CTAG	3 cut(s)	141, 951, 2303
Zsp2I	ATGCAT	2 cut(s)	397, 2018

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.