Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0010218

Physical Location & Seq

Genomic Coordinates Forward (+)

19873203 .. 19877354

Gene Structure 4152 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g17510.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2409 bp

ATGATCCAGCTCAAAAAACCAGAACTCCAACCTCTTGTCTCTCTGATTCGCTCGCAGCTCGCTCTCCCTACCACCTACGACATGTCGTTGAGTACTGGCGGCTCCATGTCCGCGGCGAGCAGCCTCAGCGAGATATCGGATATGGAGACGCTGAAACTCGGATTGGATCTTGTATCGGCCGCCAGGCGAAATATCGGGTTCCTGAGAACGGTGGCCGAGTCTCAGTGGCTTCATCAAAAGGCGACGGCTGTTGAAGCCGTGAGAAGGTACAATGAGCTCTGGATGCCGTTAGTTTCTGATCTGACGGCGGAGTCAGCGGCGGTTCCTGTGATTCATCCTCCTATAGACATTGAGTGGGTTTGGTTCTGCCACACTCTGAATCCGGTTTCTTACAGGCAATACTGTGAACAAAAATTCTCAAACTTGATAGGAAAAGCAACCATTTTCAACGAAGAGAACAAAGAGTATGCACTGATGAAGTGCAGAGAAATATGGATTAGAAGGTACCCAAATGAGCCGTTTGAGAACGAAGCTGATTCGGATTCAAATTCAGAATTGAGGGTTTTGGAGGTAGCCGATGAAGAAGCAGAGCTTTTGGAGCAAGTGAAAAAGAATAGGTTTTTGTATTCCAAGTTTTTGGAGCCATACAGGTCTGAAATTGTGTATTTAATAGCAGCAAGGCAGAGGTACAAGAGGTTTTTGTTCATGGTGCAGAGGTCCTCCATTGATTTGGATTCTCCTTTGGTCCCTGCCTCTGATATTATGCTCATGTGGCTCGCCCATCAGAGTTACCCAACAGTGTATGCTGAGGATTTGAAAGGAATGGAGGGTGATTTGGGGAAGGTGGTGACCGTGTGGGCTGTCGTGAAGGAAAAAGAGGTGGAAGAGACCAGGAAGCTTTGGGAGAGGACGTTTGATCAACCTTATGAGAAAGCTGGTGGAGAAATAGCTTTAAAATTGGACGGGGGTGTCTCATTCAAGCCGCTTGTTTACTGGGAGGCATCTGATACAGATGTCAATACCAAATACAAGCCCATGCATCCCAGGTTCTTACTTGAGGTCTGTGTGCTTGTCAGGCTTACGGATAAAACAAAGGTAATGCAAGAGGATACAAAGCGCAATATCCTTCGTCTTCGGATGGTGAGGTGCCACAGGGAGTTAAAGCTTGAAAAACCCATTTCTGATTTTCCGTATGCAACCTGGCAAAAAGCTTGGCACCTCTATTGTGAGTTTGGAACCAAAGGAGTCGTACTTGAGCTTCGCCGGCGAGGTGGCTCCTGTTTTAAAGGGACTAGCGTGCAAGAGACTGTTACATTCCATTGGAATGACTTACTTAGAGCACCGTCTCTAACTTTGGATAAAGAATATCAACAAGTGGATATCGTTGCTTCAATAACTCCACCTGTTCAAGCACCATACCTTTTGAAATGTGTGCCAGACCGTGTTACAGATGACTCGGGGGCAATGATATCAGATGTGATTCTGAGAATGAACCAGTATCGTCCCCAGGAAGGCCGGTGGTTGTCTCGCACTGTTCTTGATCATGCAGGGAGAGAGTGTTTTGTGATCCGAATAAGGATGGGAGAAGGATTTTGGAGAAGAGGAGGAGAAAAACCGTCAGCTGTGAAATGGGAGGATAGGATTATAGAGATTCGAGAAGGTTCTTGGTCTTATGTTGCTGGTTCCATTGGTAGAGCCCCTGCGAAACTGGTAGGAACAGCAATACCCAAAGAACCGCTGGAACAATGGACAGCTGCATGGAATTTTTCAACAGGTGATGAATTGATGATACAGTGGGACTTGTCATCATCGATATCAGGTCTCAGTTTTGGTATACAGAATCAAGATGCAGAATCAACGGTTAAGCTGTTGAAAGGACGGAAAATGCAGTATCGAGTATGGAAAAAAAGGCCAGTGACCGAAGATGAAGATCATCAATATGAGGAAGAAGGTGAAGACGAAGAAGGTGGAGACGAAGAAGAGGGGTTTTTAACGCTAGTACGGTACACAGAAGATAATCCAAATGGAAGAGCAACAGCTCTCTTAAATTGGAAGCTATTGGTAGCCGAATTGCTGCCTGAAGAAGATGCAGTATTGGTGCTTCTTCTATGCATTTCGATACTAAGAAGTGTATCAGAGATGAGAAAAGAAGATCTCGGATGTTTGCTGATTAGAAGAAGACTAAAGGAAGTAAAACTTGGGACTCGAGATTGGGCTTCGGTAGTACTTCACCCTTCCTCAAGTTCTTCCATTTCTTCACCTTACCTTCAACCTTGGTACTGGAATGCAAAGGTAATTATGGCATCAGAGGGTGCAGATCATTTTACTAGGCAACCGGCTATTAGTTATTCGCCGGAGGAAGGCGGCGATAAGTTGTACAAACGAGGGATACTAGCTGAGAGACGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRDP-like

Protein Analysis

803

Amino Acids

92.12

Weight (kDa)

5.81

Isoelectric Point (pI)

50.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010218)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G56230 AT1G56230 AT1G56230 AT1G56230
fragaria_vesca	FvH4_6g06870
malus_domestica	MD04G1197900.v1.1
prunus_persica	Prupe.6G318400_v2.0.a1 Prupe.6G318400_v2.0.a1
pyrus_communis	pycom04g17510
rosa_chinensis	RchiOBHm_Chr3g0456361
rosa_laevigata	RLG00000025309
rosa_multiflora	Rmu_sc0002607.1_g000019 Rmu_sc0018054.1_g000001
rosa_roxburghii	Rroxscaffold_6G00422780
rosa_rugosa	Rorug03G0012700 Rorug03G0012700
rosa_samantha	Rh3AG072900 Rh3BG075000 Rh3CG074600 Rh3DG076400
rosa_wichuraiana	Rw3G006260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	310, 968
Acc65I	GGTACC	1 cut(s)	504
AccB1I	GGYRCC	3 cut(s)	504, 1146, 1215
AccI	GTMKAC	1 cut(s)	1834
AccII	CGCG	1 cut(s)	113
AclWI	GGATC	2 cut(s)	174, 1561
AcoI	YGGCCR	2 cut(s)	177, 213
AcsI	RAATTY	3 cut(s)	413, 547, 1762
AcuI	CTGAAG	1 cut(s)	2100
AfiI	CCNNNNNNNGG	4 cut(s)	208, 264, 1511, 2360
AflIII	ACRYGT	1 cut(s)	81
AjnI	CCWGG	5 cut(s)	182, 890, 1043, 1199, 1506
AjuI	GAANNNNNNNTTGG	4 cut(s)	146, 178, 2181, 2213
Alw21I	GWGCWC	2 cut(s)	279, 1342
AlwI	GGATC	2 cut(s)	174, 1561
Ama87I	CYCGRG	2 cut(s)	1456, 2205
AoxI	GGCC	4 cut(s)	177, 213, 1513, 1910
ApeKI	GCWGC	5 cut(s)	55, 120, 674, 1754, 2074
ApoI	RAATTY	3 cut(s)	413, 547, 1762
Asp718I	GGTACC	1 cut(s)	504
AspLEI	GCGC	1 cut(s)	1119
AspS9I	GGNCC	2 cut(s)	717, 745
AsuHPI	GGTGA	7 cut(s)	842, 859, 1153, 1787, 1964, 2222, 2250
AvaI	CYCGRG	2 cut(s)	1456, 2205
AvaII	GGWCC	2 cut(s)	717, 745
BaeI	ACNNNNGTAYC	2 cut(s)	999, 1032
BanI	GGYRCC	3 cut(s)	504, 1146, 1215
BanII	GRGCYC	2 cut(s)	279, 1699
BarI	GAAGNNNNNNTAC	4 cut(s)	1242, 1274, 2085, 2117
BbsI	GAAGAC	3 cut(s)	1124, 1962, 2185
Bbv12I	GWGCWC	2 cut(s)	279, 1342
BbvCI	CCTCAGC	2 cut(s)	125, 807
BbvI	GCAGC	5 cut(s)	67, 132, 686, 1741, 2061
BccI	CCATC	3 cut(s)	789, 1132, 1573
BceAI	ACGGC	5 cut(s)	242, 261, 271, 321, 502
BciT130I	CCWGG	5 cut(s)	184, 892, 1045, 1201, 1508
BciVI	GTATCC	2 cut(s)	1102, 2382
BclI	TGATCA	2 cut(s)	916, 1540
BfaI	CTAG	4 cut(s)	1293, 1997, 2328, 2393
BfmI	CTRYAG	1 cut(s)	342
BfuI	GTATCC	2 cut(s)	1102, 2382
BglII	AGATCT	1 cut(s)	2152
BmcAI	AGTACT	2 cut(s)	94, 2226
Bme1390I	CCNGG	5 cut(s)	184, 892, 1045, 1201, 1508
Bme18I	GGWCC	2 cut(s)	717, 745
BmeT110I	CYCGRG	2 cut(s)	1456, 2205
BmgT120I	GGNCC	2 cut(s)	717, 745
BmrFI	CCNGG	5 cut(s)	184, 892, 1045, 1201, 1508
BmrI	ACTGGG	1 cut(s)	1003
BmsI	GCATC	6 cut(s)	273, 1010, 1048, 1837, 2077, 2312
BmuI	ACTGGG	1 cut(s)	1003
BpiI	GAAGAC	3 cut(s)	1124, 1962, 2185
Bpu10I	CCTNAGC	2 cut(s)	125, 807
BpuEI	CTTGAG	3 cut(s)	1076, 1274, 2224
Bsa29I	ATCGAT	1 cut(s)	1811
BsaBI	GATNNNNATC	1 cut(s)	1929
BsaI	GGTCTC	2 cut(s)	881, 1826
BsaJI	CCNNGG	4 cut(s)	111, 1043, 1506, 2273
BsaWI	WCCGGW	1 cut(s)	382
BsaXI	ACNNNNNCTCC	6 cut(s)	9, 39, 896, 926, 1543, 1573
Bsc4I	CCNNNNNNNGG	4 cut(s)	208, 264, 1511, 2360
Bse118I	RCCGGY	3 cut(s)	1263, 1515, 2335
Bse1I	ACTGG	6 cut(s)	100, 998, 1495, 1713, 1913, 2285
Bse3DI	GCAATG	1 cut(s)	1470
Bse8I	GATNNNNATC	1 cut(s)	1929
BseBI	CCWGG	5 cut(s)	184, 892, 1045, 1201, 1508
BseCI	ATCGAT	1 cut(s)	1811
BseDI	CCNNGG	4 cut(s)	111, 1043, 1506, 2273
BseGI	GGATG	6 cut(s)	288, 334, 1039, 1143, 1584, 2165
BseJI	GATNNNNATC	1 cut(s)	1929
BseLI	CCNNNNNNNGG	4 cut(s)	208, 264, 1511, 2360
BseMI	GCAATG	1 cut(s)	1470
BseMII	CTCAG	7 cut(s)	139, 194, 236, 798, 1475, 1837, 2388
BseNI	ACTGG	6 cut(s)	100, 998, 1495, 1713, 1913, 2285
BseRI	GAGGAG	2 cut(s)	1617, 1620
BseX3I	CGGCCG	1 cut(s)	177
BseXI	GCAGC	5 cut(s)	67, 132, 686, 1741, 2061
BsgI	GTGCAG	3 cut(s)	502, 731, 2334
Bsh1236I	CGCG	1 cut(s)	113
Bsh1285I	CGRYCG	1 cut(s)	180
BshFI	GGCC	4 cut(s)	179, 215, 1515, 1912
BshNI	GGYRCC	3 cut(s)	504, 1146, 1215
BshVI	ATCGAT	1 cut(s)	1811
BsiEI	CGRYCG	1 cut(s)	180
BsiHKAI	GWGCWC	2 cut(s)	279, 1342
BsiHKCI	CYCGRG	2 cut(s)	1456, 2205
BsiSI	CCGG	5 cut(s)	383, 1264, 1516, 2336, 2354
BslFI	GGGAC	5 cut(s)	731, 1303, 1488, 1811, 2215
BslI	CCNNNNNNNGG	4 cut(s)	208, 264, 1511, 2360
BsmBI	CGTCTC	4 cut(s)	140, 1350, 1965, 2395
BsmFI	GGGAC	5 cut(s)	731, 1303, 1488, 1811, 2215
BsmI	GAATGC	1 cut(s)	2290
BsnI	GGCC	4 cut(s)	179, 215, 1515, 1912
Bso31I	GGTCTC	2 cut(s)	881, 1826
BsoBI	CYCGRG	2 cut(s)	1456, 2205
Bsp1286I	GDGCHC	3 cut(s)	279, 1342, 1699
Bsp1407I	TGTACA	1 cut(s)	2376
Bsp143I	GATC	9 cut(s)	3, 166, 298, 916, 1540, 1566, 1930, 2152, 2317
BspANI	GGCC	4 cut(s)	179, 215, 1515, 1912
BspCNI	CTCAG	7 cut(s)	138, 195, 235, 799, 1476, 1836, 2389
BspDI	ATCGAT	1 cut(s)	1811
BspFNI	CGCG	1 cut(s)	113
BspPI	GGATC	2 cut(s)	174, 1561
BspQI	GCTCTTC	1 cut(s)	2023
BspT107I	GGYRCC	3 cut(s)	504, 1146, 1215
BspTNI	GGTCTC	2 cut(s)	881, 1826
BsrDI	GCAATG	1 cut(s)	1470
BsrFI	RCCGGY	3 cut(s)	1263, 1515, 2335
BsrGI	TGTACA	1 cut(s)	2376
BsrI	ACTGG	6 cut(s)	100, 998, 1495, 1713, 1913, 2285
BssAI	RCCGGY	3 cut(s)	1263, 1515, 2335
BssECI	CCNNGG	4 cut(s)	111, 1043, 1506, 2273
BssMI	GATC	9 cut(s)	3, 166, 298, 916, 1540, 1566, 1930, 2152, 2317
BssNAI	GTATAC	1 cut(s)	1835
BssT1I	CCWWGG	1 cut(s)	2273
Bst1107I	GTATAC	1 cut(s)	1835
Bst2UI	CCWGG	5 cut(s)	184, 892, 1045, 1201, 1508
Bst6I	CTCTTC	5 cut(s)	447, 879, 1594, 1974, 2023
BstAUI	TGTACA	1 cut(s)	2376
BstC8I	GCNNGC	6 cut(s)	53, 60, 118, 777, 1265, 1298
BstDEI	CTNAG	9 cut(s)	125, 203, 222, 807, 1334, 1484, 1823, 2123, 2397
BstDSI	CCRYGG	1 cut(s)	111
BstEII	GGTNACC	1 cut(s)	847
BstF5I	GGATG	6 cut(s)	288, 334, 1039, 1143, 1584, 2165
BstFNI	CGCG	1 cut(s)	113
BstHHI	GCGC	1 cut(s)	1119
BstKTI	GATC	9 cut(s)	6, 169, 301, 919, 1543, 1569, 1933, 2155, 2320
BstMBI	GATC	9 cut(s)	3, 166, 298, 916, 1540, 1566, 1930, 2152, 2317
BstMCI	CGRYCG	1 cut(s)	180
BstMWI	GCNNNNNNNGC	8 cut(s)	126, 254, 283, 314, 598, 772, 1075, 1264
BstNI	CCWGG	5 cut(s)	184, 892, 1045, 1201, 1508
BstNSI	RCATGY	1 cut(s)	85
BstPI	GGTNACC	1 cut(s)	847
BstSCI	CCNGG	5 cut(s)	182, 890, 1043, 1199, 1506
BstSFI	CTRYAG	1 cut(s)	342
BstUI	CGCG	1 cut(s)	113
BstV1I	GCAGC	5 cut(s)	67, 132, 686, 1741, 2061
BstV2I	GAAGAC	3 cut(s)	1124, 1962, 2185
BstX2I	RGATCY	2 cut(s)	166, 2152
BstXI	CCANNNNNNTGG	2 cut(s)	637, 730
BstYI	RGATCY	2 cut(s)	166, 2152
BstZ17I	GTATAC	1 cut(s)	1835
BstZI	CGGCCG	1 cut(s)	177
Bsu15I	ATCGAT	1 cut(s)	1811
BsuI	GTATCC	2 cut(s)	1102, 2382
BsuRI	GGCC	4 cut(s)	179, 215, 1515, 1912
BsuTUI	ATCGAT	1 cut(s)	1811
BtgI	CCRYGG	1 cut(s)	111
BtsCI	GGATG	6 cut(s)	288, 334, 1039, 1143, 1584, 2165
BtsIMutI	CAGTG	6 cut(s)	230, 470, 804, 1530, 1799, 1920
Cac8I	GCNNGC	6 cut(s)	53, 60, 118, 777, 1265, 1298
CfoI	GCGC	1 cut(s)	1119
Cfr10I	RCCGGY	3 cut(s)	1263, 1515, 2335
Cfr13I	GGNCC	2 cut(s)	717, 745
Cfr42I	CCGCGG	1 cut(s)	114
ClaI	ATCGAT	1 cut(s)	1811
CseI	GACGC	1 cut(s)	157
CviAII	CATG	7 cut(s)	82, 106, 706, 769, 1036, 1544, 1758
DdeI	CTNAG	9 cut(s)	125, 203, 222, 807, 1334, 1484, 1823, 2123, 2397
DpnI	GATC	9 cut(s)	5, 168, 300, 918, 1542, 1568, 1932, 2154, 2319
DpnII	GATC	9 cut(s)	3, 166, 298, 916, 1540, 1566, 1930, 2152, 2317
DraI	TTTAAA	2 cut(s)	954, 1285
DrdI	GACNNNNNNGTC	2 cut(s)	310, 968
DseDI	GACNNNNNNGTC	2 cut(s)	310, 968
EaeI	YGGCCR	2 cut(s)	177, 213
EagI	CGGCCG	1 cut(s)	177
Eam1104I	CTCTTC	5 cut(s)	447, 879, 1594, 1974, 2023
EarI	CTCTTC	5 cut(s)	447, 879, 1594, 1974, 2023
EciI	GGCGGA	1 cut(s)	323
Ecl136II	GAGCTC	1 cut(s)	277
EclXI	CGGCCG	1 cut(s)	177
Eco130I	CCWWGG	1 cut(s)	2273
Eco24I	GRGCYC	2 cut(s)	279, 1699
Eco31I	GGTCTC	2 cut(s)	881, 1826
Eco32I	GATATC	4 cut(s)	135, 1381, 1470, 1815
Eco47I	GGWCC	2 cut(s)	717, 745
Eco52I	CGGCCG	1 cut(s)	177
Eco53kI	GAGCTC	1 cut(s)	277
Eco57I	CTGAAG	1 cut(s)	2100
Eco88I	CYCGRG	2 cut(s)	1456, 2205
Eco91I	GGTNACC	1 cut(s)	847
EcoICRI	GAGCTC	1 cut(s)	277
EcoO109I	RGGNCCY	1 cut(s)	717
EcoO65I	GGTNACC	1 cut(s)	847
EcoRII	CCWGG	5 cut(s)	182, 890, 1043, 1199, 1506
EcoRV	GATATC	4 cut(s)	135, 1381, 1470, 1815
EcoT14I	CCWWGG	1 cut(s)	2273
EcoT22I	ATGCAT	2 cut(s)	1041, 2114
EcoT38I	GRGCYC	2 cut(s)	279, 1699
ErhI	CCWWGG	1 cut(s)	2273
Esp3I	CGTCTC	4 cut(s)	140, 1350, 1965, 2395
FaeI	CATG	7 cut(s)	85, 109, 709, 772, 1039, 1547, 1761
FalI	AAGNNNNNCTT	4 cut(s)	576, 608, 2181, 2213
FaqI	GGGAC	5 cut(s)	731, 1303, 1488, 1811, 2215
FatI	CATG	7 cut(s)	81, 105, 705, 768, 1035, 1543, 1757
FbaI	TGATCA	2 cut(s)	916, 1540
FblI	GTMKAC	1 cut(s)	1834
FokI	GGATG	6 cut(s)	295, 321, 1026, 1150, 1591, 2172
FriOI	GRGCYC	2 cut(s)	279, 1699
FspBI	CTAG	4 cut(s)	1293, 1997, 2328, 2393
GlaI	GCGC	1 cut(s)	1118
HaeIII	GGCC	4 cut(s)	179, 215, 1515, 1912
HapII	CCGG	5 cut(s)	383, 1264, 1516, 2336, 2354
HgaI	GACGC	1 cut(s)	157
HhaI	GCGC	1 cut(s)	1119
Hin1II	CATG	7 cut(s)	85, 109, 709, 772, 1039, 1547, 1761
Hin6I	GCGC	1 cut(s)	1117
HinP1I	GCGC	1 cut(s)	1117
HindIII	AAGCTT	3 cut(s)	896, 1163, 1209
HpaII	CCGG	5 cut(s)	383, 1264, 1516, 2336, 2354
HphI	GGTGA	7 cut(s)	842, 859, 1153, 1787, 1964, 2222, 2250
Hpy166II	GTNNAC	4 cut(s)	407, 991, 1835, 2007
Hpy188III	TCNNGA	7 cut(s)	202, 280, 865, 1538, 1655, 1844, 2207
Hpy8I	GTNNAC	4 cut(s)	407, 991, 1835, 2007
Hpy99I	CGWCG	1 cut(s)	247
HpyCH4IV	ACGT	1 cut(s)	911
HpyF10VI	GCNNNNNNNGC	8 cut(s)	126, 254, 283, 314, 598, 772, 1075, 1264
HpyF3I	CTNAG	9 cut(s)	125, 203, 222, 807, 1334, 1484, 1823, 2123, 2397
HpySE526I	ACGT	1 cut(s)	911
Hsp92II	CATG	7 cut(s)	85, 109, 709, 772, 1039, 1547, 1761
HspAI	GCGC	1 cut(s)	1117
KpnI	GGTACC	1 cut(s)	508
KroI	GCCGGC	1 cut(s)	1263
KroNI	GCCGGC	1 cut(s)	1265
Ksp22I	TGATCA	2 cut(s)	916, 1540
KspI	CCGCGG	1 cut(s)	114
Kzo9I	GATC	9 cut(s)	3, 166, 298, 916, 1540, 1566, 1930, 2152, 2317
LguI	GCTCTTC	1 cut(s)	2023
LmnI	GCTCC	4 cut(s)	107, 598, 640, 1280
Lsp1109I	GCAGC	5 cut(s)	67, 132, 686, 1741, 2061
LweI	GCATC	6 cut(s)	273, 1010, 1048, 1837, 2077, 2312
MaeI	CTAG	4 cut(s)	1293, 1997, 2328, 2393
MaeII	ACGT	1 cut(s)	911
MaeIII	GTNAC	5 cut(s)	788, 847, 1309, 1444, 1915
MalI	GATC	9 cut(s)	5, 168, 300, 918, 1542, 1568, 1932, 2154, 2319
MboI	GATC	9 cut(s)	3, 166, 298, 916, 1540, 1566, 1930, 2152, 2317
MflI	RGATCY	2 cut(s)	166, 2152
MhlI	GDGCHC	3 cut(s)	279, 1342, 1699
MlyI	GAGTC	5 cut(s)	227, 320, 1254, 1448, 2197
MmeI	TCCRAC	1 cut(s)	52
Mph1103I	ATGCAT	2 cut(s)	1041, 2114
MreI	CGCCGGCG	1 cut(s)	1263
MroNI	GCCGGC	1 cut(s)	1263
MseI	TTAA	7 cut(s)	668, 953, 1160, 1284, 1863, 1991, 2045
MslI	CAYNNNNRTG	2 cut(s)	1323, 1938
MspA1I	CMGCKG	5 cut(s)	113, 317, 1622, 1738, 1754
MspI	CCGG	5 cut(s)	383, 1264, 1516, 2336, 2354
MspR9I	CCNGG	5 cut(s)	184, 892, 1045, 1201, 1508
Mva1269I	GAATGC	1 cut(s)	2290
MvaI	CCWGG	5 cut(s)	184, 892, 1045, 1201, 1508
MvnI	CGCG	1 cut(s)	113
MwoI	GCNNNNNNNGC	8 cut(s)	126, 254, 283, 314, 598, 772, 1075, 1264
NaeI	GCCGGC	1 cut(s)	1265
NdeII	GATC	9 cut(s)	3, 166, 298, 916, 1540, 1566, 1930, 2152, 2317
NgoMIV	GCCGGC	1 cut(s)	1263
NlaIII	CATG	7 cut(s)	85, 109, 709, 772, 1039, 1547, 1761
NmeAIII	GCCGAG	1 cut(s)	241
NmuCI	GTSAC	2 cut(s)	847, 1915
NsiI	ATGCAT	2 cut(s)	1041, 2114
NspI	RCATGY	1 cut(s)	85
PaeR7I	CTCGAG	1 cut(s)	2205
PciI	ACATGT	1 cut(s)	81
PciSI	GCTCTTC	1 cut(s)	2023
PctI	GAATGC	1 cut(s)	2290
PdiI	GCCGGC	1 cut(s)	1265
PleI	GAGTC	5 cut(s)	226, 319, 1253, 1448, 2197
PpsI	GAGTC	5 cut(s)	226, 319, 1253, 1448, 2197
PpuMI	RGGWCCY	1 cut(s)	717
PscI	ACATGT	1 cut(s)	81
Psp124BI	GAGCTC	1 cut(s)	279
Psp5II	RGGWCCY	1 cut(s)	717
Psp6I	CCWGG	5 cut(s)	182, 890, 1043, 1199, 1506
PspEI	GGTNACC	1 cut(s)	847
PspGI	CCWGG	5 cut(s)	182, 890, 1043, 1199, 1506
PspPI	GGNCC	2 cut(s)	717, 745
PspPPI	RGGWCCY	1 cut(s)	717
PsuI	RGATCY	2 cut(s)	166, 2152
PvuII	CAGCTG	2 cut(s)	1622, 1754
RseI	CAYNNNNRTG	2 cut(s)	1323, 1938
SacI	GAGCTC	1 cut(s)	279
SacII	CCGCGG	1 cut(s)	114
SapI	GCTCTTC	1 cut(s)	2023
SaqAI	TTAA	7 cut(s)	668, 953, 1160, 1284, 1863, 1991, 2045
Sau3AI	GATC	9 cut(s)	3, 166, 298, 916, 1540, 1566, 1930, 2152, 2317
Sau96I	GGNCC	2 cut(s)	717, 745
ScaI	AGTACT	2 cut(s)	94, 2226
SchI	GAGTC	5 cut(s)	227, 320, 1254, 1448, 2197
ScrFI	CCNGG	5 cut(s)	184, 892, 1045, 1201, 1508
SduI	GDGCHC	3 cut(s)	279, 1342, 1699
SfaNI	GCATC	6 cut(s)	273, 1010, 1048, 1837, 2077, 2312
SfcI	CTRYAG	1 cut(s)	342
Sfr274I	CTCGAG	1 cut(s)	2205
Sfr303I	CCGCGG	1 cut(s)	114
SgrAI	CRCCGGYG	1 cut(s)	1263
SgrBI	CCGCGG	1 cut(s)	114
SinI	GGWCC	2 cut(s)	717, 745
SlaI	CTCGAG	1 cut(s)	2205
SmiMI	CAYNNNNRTG	2 cut(s)	1323, 1938
SmlI	CTYRAG	4 cut(s)	1055, 1253, 2205, 2239
SmoI	CTYRAG	4 cut(s)	1055, 1253, 2205, 2239
SspMI	CTAG	4 cut(s)	1293, 1997, 2328, 2393
SstI	GAGCTC	1 cut(s)	279
StyD4I	CCNGG	5 cut(s)	182, 890, 1043, 1199, 1506
StyI	CCWWGG	1 cut(s)	2273
TaiI	ACGT	1 cut(s)	914
TaqI	TCGA	5 cut(s)	1654, 1811, 1894, 2117, 2206
TaqII	GACCGA	1 cut(s)	1934
TatI	WGTACW	3 cut(s)	92, 2224, 2376
TauI	GCSGC	6 cut(s)	102, 116, 182, 320, 985, 2367
Tru1I	TTAA	7 cut(s)	668, 953, 1160, 1284, 1863, 1991, 2045
Tru9I	TTAA	7 cut(s)	668, 953, 1160, 1284, 1863, 1991, 2045
TscAI	CASTG	6 cut(s)	230, 477, 804, 1537, 1799, 1920
TseFI	GTSAC	2 cut(s)	847, 1915
TseI	GCWGC	5 cut(s)	55, 120, 674, 1754, 2074
Tsp45I	GTSAC	2 cut(s)	847, 1915
TspDTI	ATGAA	8 cut(s)	221, 323, 491, 594, 694, 1505, 1794, 1941
TspGWI	ACGGA	3 cut(s)	1097, 1179, 1894
TspRI	CASTG	6 cut(s)	230, 477, 804, 1537, 1799, 1920
VpaK11BI	GGWCC	2 cut(s)	717, 745
XapI	RAATTY	3 cut(s)	413, 547, 1762
XceI	RCATGY	1 cut(s)	85
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1735
XhoI	CTCGAG	1 cut(s)	2205
XmiI	GTMKAC	1 cut(s)	1834
XspI	CTAG	4 cut(s)	1293, 1997, 2328, 2393
ZrmI	AGTACT	2 cut(s)	94, 2226
Zsp2I	ATGCAT	2 cut(s)	1041, 2114

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.