No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G27020 |
| fragaria_vesca | FvH4_6g07020 |
| prunus_persica | Prupe.6G317300_v2.0.a1 |
| pyrus_communis | pycom12g19710 |
| rosa_laevigata | RLG00000025295 |
| rosa_roxburghii | Rroxscaffold_6G00422640 |
| rosa_rugosa | Rorug03G0013900 |
| rosa_samantha | Rh3AG074500 Rh3BG076200 Rh3CG075900 Rh3DG078000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 265 |
| AciI | CCGC | 1 cut(s) | 10 |
| AcsI | RAATTY | 1 cut(s) | 588 |
| AcuI | CTGAAG | 1 cut(s) | 323 |
| AfaI | GTAC | 1 cut(s) | 200 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 414 |
| AgsI | TTSAA | 1 cut(s) | 489 |
| AhlI | ACTAGT | 1 cut(s) | 94 |
| AluBI | AGCT | 3 cut(s) | 82, 244, 421 |
| AluI | AGCT | 3 cut(s) | 82, 244, 421 |
| Alw26I | GTCTC | 1 cut(s) | 464 |
| ApoI | RAATTY | 1 cut(s) | 588 |
| AsuHPI | GGTGA | 3 cut(s) | 172, 239, 277 |
| BbvCI | CCTCAGC | 1 cut(s) | 245 |
| BccI | CCATC | 2 cut(s) | 421, 535 |
| BclI | TGATCA | 1 cut(s) | 577 |
| BcoDI | GTCTC | 1 cut(s) | 464 |
| BcuI | ACTAGT | 1 cut(s) | 94 |
| BfaI | CTAG | 2 cut(s) | 18, 95 |
| BglII | AGATCT | 1 cut(s) | 20 |
| BisI | GCNGC | 1 cut(s) | 10 |
| BlsI | GCNGC | 1 cut(s) | 11 |
| BmsI | GCATC | 1 cut(s) | 54 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 106, 138 |
| BpmI | CTGGAG | 1 cut(s) | 357 |
| Bpu10I | CCTNAGC | 2 cut(s) | 245, 422 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 7, 37, 191, 221 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 414 |
| Bse1I | ACTGG | 1 cut(s) | 340 |
| Bse3DI | GCAATG | 1 cut(s) | 438 |
| BseGI | GGATG | 2 cut(s) | 57, 432 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 414 |
| BseMI | GCAATG | 1 cut(s) | 438 |
| BseMII | CTCAG | 1 cut(s) | 236 |
| BseNI | ACTGG | 1 cut(s) | 340 |
| BsgI | GTGCAG | 1 cut(s) | 574 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 414 |
| BsmAI | GTCTC | 1 cut(s) | 464 |
| Bsp143I | GATC | 4 cut(s) | 20, 136, 557, 577 |
| BspACI | CCGC | 1 cut(s) | 10 |
| BspCNI | CTCAG | 1 cut(s) | 237 |
| BspHI | TCATGA | 1 cut(s) | 343 |
| BsrDI | GCAATG | 1 cut(s) | 438 |
| BsrI | ACTGG | 1 cut(s) | 340 |
| BssMI | GATC | 4 cut(s) | 20, 136, 557, 577 |
| BssNAI | GTATAC | 1 cut(s) | 266 |
| Bst1107I | GTATAC | 1 cut(s) | 266 |
| Bst6I | CTCTTC | 1 cut(s) | 524 |
| BstC8I | GCNNGC | 1 cut(s) | 242 |
| BstDEI | CTNAG | 3 cut(s) | 245, 422, 465 |
| BstF5I | GGATG | 2 cut(s) | 57, 432 |
| BstKTI | GATC | 4 cut(s) | 23, 139, 560, 580 |
| BstMAI | GTCTC | 1 cut(s) | 464 |
| BstMBI | GATC | 4 cut(s) | 20, 136, 557, 577 |
| BstX2I | RGATCY | 1 cut(s) | 20 |
| BstYI | RGATCY | 1 cut(s) | 20 |
| BstZ17I | GTATAC | 1 cut(s) | 266 |
| BtsCI | GGATG | 2 cut(s) | 57, 432 |
| Cac8I | GCNNGC | 1 cut(s) | 242 |
| CciI | TCATGA | 1 cut(s) | 343 |
| Csp6I | GTAC | 1 cut(s) | 199 |
| CviAII | CATG | 4 cut(s) | 106, 131, 344, 442 |
| CviJI | RGCY | 7 cut(s) | 64, 82, 224, 244, 300, 421, 567 |
| CviKI_1 | RGCY | 7 cut(s) | 64, 82, 224, 244, 300, 421, 567 |
| CviQI | GTAC | 1 cut(s) | 199 |
| DdeI | CTNAG | 3 cut(s) | 245, 422, 465 |
| DpnI | GATC | 4 cut(s) | 22, 138, 559, 579 |
| DpnII | GATC | 4 cut(s) | 20, 136, 557, 577 |
| Eam1104I | CTCTTC | 1 cut(s) | 524 |
| EarI | CTCTTC | 1 cut(s) | 524 |
| Eco57I | CTGAAG | 1 cut(s) | 323 |
| FaeI | CATG | 4 cut(s) | 109, 134, 347, 445 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 156, 188 |
| FatI | CATG | 4 cut(s) | 105, 130, 343, 441 |
| FbaI | TGATCA | 1 cut(s) | 577 |
| FblI | GTMKAC | 1 cut(s) | 265 |
| Fnu4HI | GCNGC | 1 cut(s) | 10 |
| FokI | GGATG | 2 cut(s) | 64, 439 |
| Fsp4HI | GCNGC | 1 cut(s) | 10 |
| FspBI | CTAG | 2 cut(s) | 18, 95 |
| GluI | GCNGC | 1 cut(s) | 10 |
| GsuI | CTGGAG | 1 cut(s) | 357 |
| Hin1II | CATG | 4 cut(s) | 109, 134, 347, 445 |
| HindIII | AAGCTT | 1 cut(s) | 419 |
| HinfI | GANTC | 4 cut(s) | 75, 250, 485, 535 |
| HphI | GGTGA | 3 cut(s) | 172, 239, 277 |
| Hpy166II | GTNNAC | 2 cut(s) | 100, 266 |
| Hpy188I | TCNGA | 2 cut(s) | 255, 540 |
| Hpy188III | TCNNGA | 2 cut(s) | 49, 344 |
| Hpy8I | GTNNAC | 2 cut(s) | 100, 266 |
| HpyAV | CCTTC | 1 cut(s) | 578 |
| HpyCH4IV | ACGT | 1 cut(s) | 348 |
| HpyCH4V | TGCA | 5 cut(s) | 109, 414, 441, 525, 555 |
| HpyF3I | CTNAG | 3 cut(s) | 245, 422, 465 |
| HpySE526I | ACGT | 1 cut(s) | 348 |
| Hsp92II | CATG | 4 cut(s) | 109, 134, 347, 445 |
| Ksp22I | TGATCA | 1 cut(s) | 577 |
| Kzo9I | GATC | 4 cut(s) | 20, 136, 557, 577 |
| LmnI | GCTCC | 2 cut(s) | 87, 237 |
| LpnPI | CCDG | 7 cut(s) | 34, 210, 314, 321, 354, 362, 400 |
| LweI | GCATC | 1 cut(s) | 54 |
| MaeI | CTAG | 2 cut(s) | 18, 95 |
| MaeII | ACGT | 1 cut(s) | 348 |
| MaeIII | GTNAC | 1 cut(s) | 90 |
| MalI | GATC | 4 cut(s) | 22, 138, 559, 579 |
| MboI | GATC | 4 cut(s) | 20, 136, 557, 577 |
| MboII | GAAGA | 5 cut(s) | 316, 466, 494, 509, 541 |
| MfeI | CAATTG | 1 cut(s) | 409 |
| MflI | RGATCY | 1 cut(s) | 20 |
| MluCI | AATT | 2 cut(s) | 409, 588 |
| MlyI | GAGTC | 1 cut(s) | 244 |
| MmeI | TCCRAC | 1 cut(s) | 240 |
| MnlI | CCTC | 7 cut(s) | 214, 217, 240, 293, 472, 525, 539 |
| MslI | CAYNNNNRTG | 2 cut(s) | 50, 129 |
| MunI | CAATTG | 1 cut(s) | 409 |
| NdeII | GATC | 4 cut(s) | 20, 136, 557, 577 |
| NlaIII | CATG | 4 cut(s) | 109, 134, 347, 445 |
| PagI | TCATGA | 1 cut(s) | 343 |
| PfeI | GAWTC | 3 cut(s) | 75, 485, 535 |
| PkrI | GCNGC | 1 cut(s) | 11 |
| PleI | GAGTC | 1 cut(s) | 244 |
| PpsI | GAGTC | 1 cut(s) | 244 |
| PsuI | RGATCY | 1 cut(s) | 20 |
| RsaI | GTAC | 1 cut(s) | 200 |
| RsaNI | GTAC | 1 cut(s) | 199 |
| RseI | CAYNNNNRTG | 2 cut(s) | 50, 129 |
| SatI | GCNGC | 1 cut(s) | 10 |
| Sau3AI | GATC | 4 cut(s) | 20, 136, 557, 577 |
| SchI | GAGTC | 1 cut(s) | 244 |
| SetI | ASST | 7 cut(s) | 84, 246, 271, 351, 373, 400, 423 |
| SfaNI | GCATC | 1 cut(s) | 54 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 50, 129 |
| SpeI | ACTAGT | 1 cut(s) | 94 |
| Sse9I | AATT | 2 cut(s) | 409, 588 |
| SsiI | CCGC | 1 cut(s) | 10 |
| SspMI | CTAG | 2 cut(s) | 18, 95 |
| TaiI | ACGT | 1 cut(s) | 351 |
| TasI | AATT | 2 cut(s) | 409, 588 |
| TatI | WGTACW | 1 cut(s) | 198 |
| TauI | GCSGC | 1 cut(s) | 12 |
| TfiI | GAWTC | 3 cut(s) | 75, 485, 535 |
| TspDTI | ATGAA | 6 cut(s) | 28, 68, 332, 473, 531, 600 |
| XapI | RAATTY | 1 cut(s) | 588 |
| XmiI | GTMKAC | 1 cut(s) | 265 |
| XspI | CTAG | 2 cut(s) | 18, 95 |