FvH4_6g14300

Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
8764486 .. 8769481
4996 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g14300.t2

Sequence Viewer

Length: 1383 bp
ATGTATCTCTGTCTTCCTCACTACGTCTCTATCAAATTGCCTGCATTTCACTCTCCACAGAGGGACTTTAAGCTTCGCGCGGTTTCAATGTCCGCAACTGAAGTCGCCAATCACGTTCCGCCGGCTCCGATTTCGCTCCCTCATGGGCCTTGGAAGCAGATTCCCGGCGGAGTTACGGCGGCGGAGGGGTTTAAAGCGGCTGGTTTATACGGCGGATTGCGCGCCAAAGGTGACAAACCTGATCTTGCACTTGTCACCTGTGACGTTGATGCCATTTCTGCTGGATCATTTACTACAAATGTGGTAGCAGCTGCACCGGTGTTATACTGCAAAAGTATATTAAACACTTCGAAAACGGCGCGGGCAGTTTTGATAAATGCTGGCCAAGCCAATGCAGCAACGGGTGATGCAGGTTATCAAGATGTAATAGAAAGTGCCAGCGGCCTTGCAAAGCTACTTCACATAAGACCAGAGGAAGTGCTGATTGAATCCACTGGCGTGATTGGGCAAAGAATAAAAAAGGAAGCACTTTTAAAGTCTCTACCGAACCTGGTGAAATCACTATCACCTGCAACTAAGGGAGCAGATGATGCAGCAGTGGCAATCACAACTACTGACCTTGTTAGCAAGAGTGTAGCAATTCAGTCTCAGGTTGGAGGGACAAGCATTAGAGTCGGGGGAATGGCAAAAGGTTCCGGGATGATCCACCCAAATATGGCTACCATGCTTGGTGTAGTAACAACTGATGCCGTGGTTAGCAGTGATGTTTGGAGAAAAATGGTTCAAATTGCTGTAAATAGAAGCTTCAACCAGATAACAGTAGACGGAGATACCAGTACCAATGATACTGTCATTGCCTTAGCTAGTGGATTGTCTGGATCAACCAAGATATCAACCTTTAACAGTAATGAGGCAGTACAACTTCAAGCATGTCTTGATGTGGTAATGCAAGGTCTTGCCAAATCAATAGCTTGGGATGGAGAAGGAGCAACATGCCTAATTGAGGTCACAGTGACTGGTGCAGGCAGTGAGGCTGAAGCAGCAAAGATAGCGCGGTCTGTGGCATCTTCTTCGCTTGTCAAGGCTGCAGTATATGGAAGAGATCCAAACTGGGGACGCATCGCCGCTGCAGCAGGCTATGCGGGCATTTCTTTTGATCAAACTAAACTCCGAGTATTGCTAGGTGATACTCTGCTCATGGATGGTGGGGAACCACAATCCTTCGACAGGAATGCTGCTAGTGACTACCTCAGGAAAGCCGGTGAGATCCATGGCACAGTTGTAATCAATGTCACTGTAGGTGATGGACCGGGGTGTGGTCAAGCCTGGGGCTGTGACCTGAGCTACGATTACGTCAAAATAAATGCCGAGTACACAACATAG

Protein Analysis

461

Amino Acids

47.67

Weight (kDa)

6.4

Isoelectric Point (pI)

32.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ArgJ PF01960 66 - 429 1e-122 ArgJ family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012177)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 577
Acc36I ACCTGC 2 cut(s) 401, 577
AccI GTMKAC 1 cut(s) 822
AccII CGCG 5 cut(s) 78, 80, 222, 361, 1054
AclWI GGATC 5 cut(s) 292, 697, 886, 1097, 1261
AcoI YGGCCR 1 cut(s) 382
AcuI CTGAAG 2 cut(s) 120, 1056
AfaI GTAC 3 cut(s) 838, 918, 1373
AfiI CCNNNNNNNGG 5 cut(s) 715, 1003, 1112, 1227, 1316
AgeI ACCGGT 1 cut(s) 316
AgsI TTSAA 5 cut(s) 87, 488, 785, 808, 926
AjnI CCWGG 2 cut(s) 549, 1325
AleI CACNNNNGTG 1 cut(s) 497
AluBI AGCT 7 cut(s) 73, 311, 454, 804, 863, 971, 1344
AluI AGCT 7 cut(s) 73, 311, 454, 804, 863, 971, 1344
Alw26I GTCTC 3 cut(s) 31, 543, 651
AlwI GGATC 5 cut(s) 292, 697, 886, 1097, 1261
AlwNI CAGNNNCTG 1 cut(s) 1016
AoxI GGCC 3 cut(s) 146, 382, 442
ApeKI GCWGC 9 cut(s) 308, 311, 395, 593, 1040, 1085, 1127, 1130, 1235
AsiGI ACCGGT 1 cut(s) 316
AspLEI GCGC 5 cut(s) 80, 222, 224, 361, 1054
AspS9I GGNCC 2 cut(s) 146, 1307
AsuC2I CCSGG 3 cut(s) 165, 697, 1311
AsuHPI GGTGA 8 cut(s) 242, 247, 416, 558, 565, 1196, 1274, 1313
AsuII TTCGAA 1 cut(s) 350
AvaII GGWCC 1 cut(s) 1307
AxyI CCTNAGG 1 cut(s) 1250
BalI TGGCCA 1 cut(s) 384
BbsI GAAGAC 1 cut(s) 5
BbvI GCAGC 9 cut(s) 298, 320, 407, 605, 1052, 1072, 1114, 1142, 1222
BccI CCATC 3 cut(s) 971, 1196, 1298
BceAI ACGGC 4 cut(s) 192, 226, 372, 734
BcgI CGANNNNNNTGC 6 cut(s) 655, 689, 1053, 1087, 1214, 1248
BciT130I CCWGG 2 cut(s) 551, 1327
BclI TGATCA 1 cut(s) 1156
BcnI CCSGG 3 cut(s) 165, 697, 1311
BcoDI GTCTC 3 cut(s) 31, 543, 651
BfaI CTAG 3 cut(s) 864, 1181, 1239
BfmI CTRYAG 3 cut(s) 1086, 1128, 1296
BfuAI ACCTGC 2 cut(s) 401, 577
Bme1390I CCNGG 5 cut(s) 165, 551, 697, 1311, 1327
Bme18I GGWCC 1 cut(s) 1307
BmgT120I GGNCC 2 cut(s) 146, 1307
BmiI GGNNCC 3 cut(s) 126, 694, 1212
BmrFI CCNGG 5 cut(s) 165, 551, 697, 1311, 1327
BmrI ACTGGG 1 cut(s) 1120
BmsI GCATC 6 cut(s) 259, 397, 580, 736, 1073, 1128
BmuI ACTGGG 1 cut(s) 1120
BpiI GAAGAC 1 cut(s) 5
Bpu10I CCTNAGC 2 cut(s) 859, 1340
Bpu14I TTCGAA 1 cut(s) 350
BpuMI CCSGG 3 cut(s) 165, 697, 1311
BsaJI CCNNGG 5 cut(s) 149, 750, 1270, 1310, 1326
BsaWI WCCGGW 1 cut(s) 316
Bsc4I CCNNNNNNNGG 5 cut(s) 715, 1003, 1112, 1227, 1316
Bse118I RCCGGY 3 cut(s) 121, 316, 1259
Bse1I ACTGG 4 cut(s) 499, 834, 1021, 1115
Bse21I CCTNAGG 1 cut(s) 1250
Bse3DI GCAATG 1 cut(s) 852
BseBI CCWGG 2 cut(s) 551, 1327
BseDI CCNNGG 5 cut(s) 149, 750, 1270, 1310, 1326
BseGI GGATG 3 cut(s) 705, 982, 1207
BseLI CCNNNNNNNGG 5 cut(s) 715, 1003, 1112, 1227, 1316
BseMI GCAATG 1 cut(s) 852
BseMII CTCAG 3 cut(s) 662, 1264, 1331
BseNI ACTGG 4 cut(s) 499, 834, 1021, 1115
BsePI GCGCGC 1 cut(s) 220
BseXI GCAGC 9 cut(s) 298, 320, 407, 605, 1052, 1072, 1114, 1142, 1222
BsgI GTGCAG 2 cut(s) 297, 1041
Bsh1236I CGCG 5 cut(s) 78, 80, 222, 361, 1054
BshFI GGCC 3 cut(s) 148, 384, 444
BshTI ACCGGT 1 cut(s) 316
BsiSI CCGG 6 cut(s) 122, 165, 317, 696, 1260, 1310
BslFI GGGAC 3 cut(s) 77, 673, 1128
BslI CCNNNNNNNGG 5 cut(s) 715, 1003, 1112, 1227, 1316
BsmAI GTCTC 3 cut(s) 31, 543, 651
BsmBI CGTCTC 1 cut(s) 31
BsmFI GGGAC 3 cut(s) 77, 673, 1128
BsmI GAATGC 1 cut(s) 1237
BsnI GGCC 3 cut(s) 148, 384, 444
Bsp119I TTCGAA 1 cut(s) 350
Bsp143I GATC 7 cut(s) 241, 284, 702, 878, 1102, 1156, 1266
Bsp19I CCATGG 1 cut(s) 1270
BspANI GGCC 3 cut(s) 148, 384, 444
BspCNI CTCAG 3 cut(s) 661, 1263, 1332
BspFNI CGCG 5 cut(s) 78, 80, 222, 361, 1054
BspLI GGNNCC 3 cut(s) 126, 694, 1212
BspMAI CTGCAG 2 cut(s) 1090, 1132
BspMI ACCTGC 2 cut(s) 401, 577
BspPI GGATC 5 cut(s) 292, 697, 886, 1097, 1261
BspT104I TTCGAA 1 cut(s) 350
BsrDI GCAATG 1 cut(s) 852
BsrFI RCCGGY 3 cut(s) 121, 316, 1259
BsrI ACTGG 4 cut(s) 499, 834, 1021, 1115
BssAI RCCGGY 3 cut(s) 121, 316, 1259
BssECI CCNNGG 5 cut(s) 149, 750, 1270, 1310, 1326
BssHII GCGCGC 1 cut(s) 220
BssMI GATC 7 cut(s) 241, 284, 702, 878, 1102, 1156, 1266
BssT1I CCWWGG 2 cut(s) 149, 1270
Bst2UI CCWGG 2 cut(s) 551, 1327
Bst4CI ACNGT 6 cut(s) 820, 850, 905, 1012, 1279, 1297
Bst6I CTCTTC 1 cut(s) 1093
BstAPI GCANNNNNTGC 2 cut(s) 590, 1139
BstBI TTCGAA 1 cut(s) 350
BstC8I GCNNGC 9 cut(s) 42, 123, 222, 363, 382, 439, 1024, 1135, 1144
BstDEI CTNAG 5 cut(s) 576, 648, 859, 1250, 1340
BstDSI CCRYGG 2 cut(s) 750, 1270
BstENI CCTNNNNNAGG 2 cut(s) 1001, 1225
BstF5I GGATG 3 cut(s) 705, 982, 1207
BstFNI CGCG 5 cut(s) 78, 80, 222, 361, 1054
BstHHI GCGC 5 cut(s) 80, 222, 224, 361, 1054
BstKTI GATC 7 cut(s) 244, 287, 705, 881, 1105, 1159, 1269
BstMAI GTCTC 3 cut(s) 31, 543, 651
BstMBI GATC 7 cut(s) 241, 284, 702, 878, 1102, 1156, 1266
BstNI CCWGG 2 cut(s) 551, 1327
BstNSI RCATGY 2 cut(s) 933, 996
BstSCI CCNGG 5 cut(s) 163, 549, 695, 1309, 1325
BstSFI CTRYAG 3 cut(s) 1086, 1128, 1296
BstUI CGCG 5 cut(s) 78, 80, 222, 361, 1054
BstV1I GCAGC 9 cut(s) 298, 320, 407, 605, 1052, 1072, 1114, 1142, 1222
BstV2I GAAGAC 1 cut(s) 5
BstX2I RGATCY 2 cut(s) 1102, 1266
BstYI RGATCY 2 cut(s) 1102, 1266
Bsu36I CCTNAGG 1 cut(s) 1250
BsuRI GGCC 3 cut(s) 148, 384, 444
BtgI CCRYGG 2 cut(s) 750, 1270
BtgZI GCGATG 1 cut(s) 1105
BtsCI GGATG 3 cut(s) 705, 982, 1207
BtsI GCAGTG 3 cut(s) 603, 766, 1033
BtsIMutI CAGTG 6 cut(s) 492, 603, 766, 1017, 1033, 1293
BveI ACCTGC 2 cut(s) 401, 577
Cac8I GCNNGC 9 cut(s) 42, 123, 222, 363, 382, 439, 1024, 1135, 1144
CaiI CAGNNNCTG 1 cut(s) 1016
CfoI GCGC 5 cut(s) 80, 222, 224, 361, 1054
Cfr10I RCCGGY 3 cut(s) 121, 316, 1259
Cfr13I GGNCC 2 cut(s) 146, 1307
CseI GACGC 1 cut(s) 1125
CsiI ACCWGGT 1 cut(s) 549
Csp6I GTAC 3 cut(s) 837, 917, 1372
CspAI ACCGGT 1 cut(s) 316
CviAII CATG 6 cut(s) 143, 724, 930, 993, 1198, 1271
CviQI GTAC 3 cut(s) 837, 917, 1372
DdeI CTNAG 5 cut(s) 576, 648, 859, 1250, 1340
DpnI GATC 7 cut(s) 243, 286, 704, 880, 1104, 1158, 1268
DpnII GATC 7 cut(s) 241, 284, 702, 878, 1102, 1156, 1266
DraI TTTAAA 2 cut(s) 193, 534
EaeI YGGCCR 1 cut(s) 382
Eam1104I CTCTTC 1 cut(s) 1093
EarI CTCTTC 1 cut(s) 1093
EciI GGCGGA 4 cut(s) 108, 183, 197, 228
Eco130I CCWWGG 2 cut(s) 149, 1270
Eco32I GATATC 1 cut(s) 891
Eco47I GGWCC 1 cut(s) 1307
Eco57I CTGAAG 2 cut(s) 120, 1056
Eco81I CCTNAGG 1 cut(s) 1250
EcoNI CCTNNNNNAGG 2 cut(s) 1001, 1225
EcoRII CCWGG 2 cut(s) 549, 1325
EcoRV GATATC 1 cut(s) 891
EcoT14I CCWWGG 2 cut(s) 149, 1270
ErhI CCWWGG 2 cut(s) 149, 1270
Esp3I CGTCTC 1 cut(s) 31
FaeI CATG 6 cut(s) 146, 727, 933, 996, 1201, 1274
FalI AAGNNNNNCTT 2 cut(s) 918, 950
FaqI GGGAC 3 cut(s) 77, 673, 1128
FatI CATG 6 cut(s) 142, 723, 929, 992, 1197, 1270
FauI CCCGC 2 cut(s) 354, 1135
FbaI TGATCA 1 cut(s) 1156
FblI GTMKAC 1 cut(s) 822
FokI GGATG 3 cut(s) 712, 989, 1214
FspBI CTAG 3 cut(s) 864, 1181, 1239
GlaI GCGC 5 cut(s) 79, 221, 223, 360, 1053
HaeIII GGCC 3 cut(s) 148, 384, 444
HapII CCGG 6 cut(s) 122, 165, 317, 696, 1260, 1310
HgaI GACGC 1 cut(s) 1125
HhaI GCGC 5 cut(s) 80, 222, 224, 361, 1054
Hin1II CATG 6 cut(s) 146, 727, 933, 996, 1201, 1274
Hin6I GCGC 5 cut(s) 78, 220, 222, 359, 1052
HinP1I GCGC 5 cut(s) 78, 220, 222, 359, 1052
HindIII AAGCTT 2 cut(s) 71, 802
HinfI GANTC 3 cut(s) 160, 488, 672
HpaII CCGG 6 cut(s) 122, 165, 317, 696, 1260, 1310
HphI GGTGA 8 cut(s) 242, 247, 416, 558, 565, 1196, 1274, 1313
Hpy166II GTNNAC 2 cut(s) 823, 1374
Hpy188I TCNGA 2 cut(s) 129, 1172
Hpy188III TCNNGA 4 cut(s) 419, 876, 935, 1252
Hpy8I GTNNAC 2 cut(s) 823, 1374
HpyAV CCTTC 2 cut(s) 977, 1231
HpyCH4III ACNGT 6 cut(s) 820, 850, 905, 1012, 1279, 1297
HpyCH4IV ACGT 4 cut(s) 24, 114, 264, 1353
HpyF3I CTNAG 5 cut(s) 576, 648, 859, 1250, 1340
HpySE526I ACGT 4 cut(s) 24, 114, 264, 1353
Hsp92II CATG 6 cut(s) 146, 727, 933, 996, 1201, 1274
HspAI GCGC 5 cut(s) 78, 220, 222, 359, 1052
KroI GCCGGC 1 cut(s) 121
KroNI GCCGGC 1 cut(s) 123
Ksp22I TGATCA 1 cut(s) 1156
Kzo9I GATC 7 cut(s) 241, 284, 702, 878, 1102, 1156, 1266
LmnI GCTCC 4 cut(s) 130, 141, 581, 986
Lsp1109I GCAGC 9 cut(s) 298, 320, 407, 605, 1052, 1072, 1114, 1142, 1222
LweI GCATC 6 cut(s) 259, 397, 580, 736, 1073, 1128
MabI ACCWGGT 1 cut(s) 549
MaeI CTAG 3 cut(s) 864, 1181, 1239
MaeII ACGT 4 cut(s) 24, 114, 264, 1353
MalI GATC 7 cut(s) 243, 286, 704, 880, 1104, 1158, 1268
MboI GATC 7 cut(s) 241, 284, 702, 878, 1102, 1156, 1266
MboII GAAGA 4 cut(s) 5, 1059, 1062, 1110
MflI RGATCY 2 cut(s) 1102, 1266
MlsI TGGCCA 1 cut(s) 384
MluCI AATT 4 cut(s) 35, 639, 786, 999
MluNI TGGCCA 1 cut(s) 384
MlyI GAGTC 1 cut(s) 681
MmeI TCCRAC 1 cut(s) 634
Mox20I TGGCCA 1 cut(s) 384
MroNI GCCGGC 1 cut(s) 121
MscI TGGCCA 1 cut(s) 384
MseI TTAA 5 cut(s) 69, 192, 341, 533, 900
MslI CAYNNNNRTG 1 cut(s) 497
Msp20I TGGCCA 1 cut(s) 384
MspA1I CMGCKG 3 cut(s) 311, 441, 1127
MspI CCGG 6 cut(s) 122, 165, 317, 696, 1260, 1310
MspR9I CCNGG 5 cut(s) 165, 551, 697, 1311, 1327
Mva1269I GAATGC 1 cut(s) 1237
MvaI CCWGG 2 cut(s) 551, 1327
MvnI CGCG 5 cut(s) 78, 80, 222, 361, 1054
NaeI GCCGGC 1 cut(s) 123
NciI CCSGG 3 cut(s) 165, 697, 1311
NcoI CCATGG 1 cut(s) 1270
NdeII GATC 7 cut(s) 241, 284, 702, 878, 1102, 1156, 1266
NgoMIV GCCGGC 1 cut(s) 121
NlaIII CATG 6 cut(s) 146, 727, 933, 996, 1201, 1274
NlaIV GGNNCC 3 cut(s) 126, 694, 1212
NmuCI GTSAC 8 cut(s) 230, 253, 260, 1006, 1012, 1241, 1291, 1334
NspI RCATGY 2 cut(s) 933, 996
NspV TTCGAA 1 cut(s) 350
OliI CACNNNNGTG 1 cut(s) 497
PaqCI CACCTGC 1 cut(s) 577
PauI GCGCGC 1 cut(s) 220
PcsI WCGNNNNNNNCGW 1 cut(s) 111
PctI GAATGC 1 cut(s) 1237
PdiI GCCGGC 1 cut(s) 123
PfeI GAWTC 2 cut(s) 160, 488
PfoI TCCNGGA 1 cut(s) 695
PinAI ACCGGT 1 cut(s) 316
PleI GAGTC 1 cut(s) 680
PpsI GAGTC 1 cut(s) 680
Psp6I CCWGG 2 cut(s) 549, 1325
PspGI CCWGG 2 cut(s) 549, 1325
PspN4I GGNNCC 3 cut(s) 126, 694, 1212
PspPI GGNCC 2 cut(s) 146, 1307
PstI CTGCAG 2 cut(s) 1090, 1132
PstNI CAGNNNCTG 1 cut(s) 1016
PsuI RGATCY 2 cut(s) 1102, 1266
PteI GCGCGC 1 cut(s) 220
PvuII CAGCTG 1 cut(s) 311
RsaI GTAC 3 cut(s) 838, 918, 1373
RsaNI GTAC 3 cut(s) 837, 917, 1372
RseI CAYNNNNRTG 1 cut(s) 497
SaqAI TTAA 5 cut(s) 69, 192, 341, 533, 900
Sau3AI GATC 7 cut(s) 241, 284, 702, 878, 1102, 1156, 1266
Sau96I GGNCC 2 cut(s) 146, 1307
SchI GAGTC 1 cut(s) 681
ScrFI CCNGG 5 cut(s) 165, 551, 697, 1311, 1327
SexAI ACCWGGT 1 cut(s) 549
SfaNI GCATC 6 cut(s) 259, 397, 580, 736, 1073, 1128
SfcI CTRYAG 3 cut(s) 1086, 1128, 1296
SfuI TTCGAA 1 cut(s) 350
SgrAI CRCCGGYG 1 cut(s) 316
SinI GGWCC 1 cut(s) 1307
SmiMI CAYNNNNRTG 1 cut(s) 497
Sse9I AATT 4 cut(s) 35, 639, 786, 999
SspMI CTAG 3 cut(s) 864, 1181, 1239
StyD4I CCNGG 5 cut(s) 163, 549, 695, 1309, 1325
StyI CCWWGG 2 cut(s) 149, 1270
TaaI ACNGT 6 cut(s) 820, 850, 905, 1012, 1279, 1297
TaiI ACGT 4 cut(s) 27, 117, 267, 1356
TaqI TCGA 2 cut(s) 350, 1224
TasI AATT 4 cut(s) 35, 639, 786, 999
TatI WGTACW 2 cut(s) 916, 1371
TauI GCSGC 4 cut(s) 182, 200, 444, 1127
TfiI GAWTC 2 cut(s) 160, 488
Tru1I TTAA 5 cut(s) 69, 192, 341, 533, 900
Tru9I TTAA 5 cut(s) 69, 192, 341, 533, 900
TscAI CASTG 6 cut(s) 499, 603, 766, 1017, 1033, 1300
TseFI GTSAC 8 cut(s) 230, 253, 260, 1006, 1012, 1241, 1291, 1334
TseI GCWGC 9 cut(s) 308, 311, 395, 593, 1040, 1085, 1127, 1130, 1235
Tsp45I GTSAC 8 cut(s) 230, 253, 260, 1006, 1012, 1241, 1291, 1334
TspGWI ACGGA 1 cut(s) 840
TspRI CASTG 6 cut(s) 499, 603, 766, 1017, 1033, 1300
VpaK11BI GGWCC 1 cut(s) 1307
XagI CCTNNNNNAGG 2 cut(s) 1001, 1225
XceI RCATGY 2 cut(s) 933, 996
XmiI GTMKAC 1 cut(s) 822
XspI CTAG 3 cut(s) 864, 1181, 1239
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.