Rroxscaffold_6G00413760

Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
Physical Location & Seq
Reverse (-)
36103975 .. 36109041
5067 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00413760.1

Sequence Viewer

Length: 1317 bp
ATGGACTTTAAGCTTCGCGCCGTTTCAATGTCGGCAACGGAAGTCGCTAATCACGTTCCGGCGGCTCCGATTTCGCTCCCTCAAGGGCCTTGGAAGCAGATTGCCGGCGGAGTTACGGCGGCAGAGGGATTCAAAGCTGCTGGTTTATACGGCGGTTTGCGCGCCAAAGGAGATAAACCTGATCTTGCACTTGTCACTTGTGACGTTGATGCCATTTCTGCTGGATCATTTACTACAAATGTGGTAGCAGCTGCACCTGTCTTATACTGCAAAAGTATATTAAACACTTCGGAAACGGCACGGGCAGTTTTGATAAATGCTGGCCAAGCCAATGCAGCAACGGGTGATGCAGGTTATCAAGATGTAATAGAAAGTGCGAGCAGCCTTGCTAAGCTACTTCAAATAAGGCCAGAGGAAGTGCTGATTGAATCCACTGGCGTGATTGGGCAAAGAATAAAAAAGGAAGCACTTTTGAAGTCTCTTCCAAACCTGGTGAAATCACTATCACCAGCAACTAAGGGAGCAGATGATGCAGCAGTGGCAATCACGACTACTGACCTTGTTAGCAAGAGTGTAGCAATTCAGTCTCAGGTTGGTGGGACGAACATAAGAGTTGGGGGAATGGCAAAAGGTTCCGGGATGATCCACCCAAATATGGCTACCATGCTTGGTGTATTAACAACTGATGCTGTGGTTAGCAGTGATGTTTGGAGAAAAATGGTTCAAATTGCTGTAAATAGAAGCTTCAACCAGATAACAGTAGACGGAGATACCAGTACCAATGATACTGTCATTGCCTTAGCTAGTGGGTTGTCTGGATCAACCAAGATATCAACCTTTAACAGTAATGAGGCAGTACAACTTCAAGCATGTCTTGATGCGGTAATGCAAGGTCTTGCCAAATCAATAGCTTGGGATGGAGAAGGAGCAACATGCCTAATAGAGGTCACAGTGACTGGTGCAGGCAGTGAGGCTGAAGCAGCAAAGATCGCGCGGTCTGTGGCATCTTCTTCGCTTGCTGCTGTATATGGAAGAGATCCAAACTGGGGACGCATCGCCGCTGCTGCAGGTTATGCGGGTATTTCTTTTGATCAAACTAAGCTTCGAGTATTGCTAGGTGATACTCTGCTGATGGATGGTGGGGAACCACAATCCTTCGACAGGGATGCGGCTAGTGCCTACCTTAGGAAAGCCGGTGAGATCCATGGCACAGTTGTAATCAATGTAGCTGTTGGTGATGGACCGGGACATGGTCAAGCATGGGGCTGTGACTTGAGCTATGATTACGTCAAAATAAACGCTGAGTACACAACATAG

Protein Analysis

438

Amino Acids

45.02

Weight (kDa)

5.26

Isoelectric Point (pI)

30.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ArgJ PF01960 46 - 438 5.2e-134 ArgJ family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012177)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 341, 1058
AccI GTMKAC 1 cut(s) 762
AccII CGCG 4 cut(s) 18, 162, 992, 994
AciI CCGC 9 cut(s) 62, 108, 119, 153, 881, 994, 1059, 1076, 1169
AclWI GGATC 5 cut(s) 232, 637, 826, 1031, 1195
AcoI YGGCCR 1 cut(s) 322
AcuI CTGAAG 1 cut(s) 996
AfaI GTAC 3 cut(s) 778, 858, 1307
AfiI CCNNNNNNNGG 6 cut(s) 655, 943, 1046, 1161, 1185, 1250
AgsI TTSAA 8 cut(s) 27, 133, 401, 428, 475, 725, 748, 866
AjnI CCWGG 1 cut(s) 489
AleI CACNNNNGTG 1 cut(s) 437
Alw26I GTCTC 2 cut(s) 483, 591
AlwI GGATC 5 cut(s) 232, 637, 826, 1031, 1195
AlwNI CAGNNNCTG 1 cut(s) 956
AoxI GGCC 3 cut(s) 86, 322, 407
AspLEI GCGC 4 cut(s) 20, 162, 164, 994
AspS9I GGNCC 2 cut(s) 86, 1241
AsuC2I CCSGG 2 cut(s) 637, 1245
AsuHPI GGTGA 6 cut(s) 356, 498, 505, 1130, 1208, 1247
AvaII GGWCC 1 cut(s) 1241
AxyI CCTNAGG 1 cut(s) 1184
BalI TGGCCA 1 cut(s) 324
BccI CCATC 4 cut(s) 911, 1126, 1130, 1232
BceAI ACGGC 4 cut(s) 5, 132, 166, 312
BcgI CGANNNNNNTGC 4 cut(s) 993, 1027, 1148, 1182
BciT130I CCWGG 1 cut(s) 491
BclI TGATCA 1 cut(s) 1090
BcnI CCSGG 2 cut(s) 637, 1245
BcoDI GTCTC 2 cut(s) 483, 591
BfaI CTAG 3 cut(s) 804, 1115, 1173
BfmI CTRYAG 1 cut(s) 1065
BfuAI ACCTGC 2 cut(s) 341, 1058
BlpI GCTNAGC 1 cut(s) 390
Bme1390I CCNGG 3 cut(s) 491, 637, 1245
Bme18I GGWCC 1 cut(s) 1241
BmgT120I GGNCC 2 cut(s) 86, 1241
BmiI GGNNCC 3 cut(s) 66, 634, 1146
BmrFI CCNGG 3 cut(s) 491, 637, 1245
BmrI ACTGGG 1 cut(s) 1054
BmsI GCATC 8 cut(s) 199, 337, 520, 676, 868, 1013, 1062, 1156
BmuI ACTGGG 1 cut(s) 1054
Bpu10I CCTNAGC 1 cut(s) 799
Bpu1102I GCTNAGC 1 cut(s) 390
BpuEI CTTGAG 2 cut(s) 66, 1294
BpuMI CCSGG 2 cut(s) 637, 1245
BsaJI CCNNGG 2 cut(s) 89, 1204
Bsc4I CCNNNNNNNGG 6 cut(s) 655, 943, 1046, 1161, 1185, 1250
Bse118I RCCGGY 2 cut(s) 104, 1193
Bse1I ACTGG 4 cut(s) 439, 774, 961, 1049
Bse21I CCTNAGG 1 cut(s) 1184
Bse3DI GCAATG 1 cut(s) 792
BseBI CCWGG 1 cut(s) 491
BseDI CCNNGG 2 cut(s) 89, 1204
BseGI GGATG 4 cut(s) 645, 922, 1141, 1171
BseLI CCNNNNNNNGG 6 cut(s) 655, 943, 1046, 1161, 1185, 1250
BseMI GCAATG 1 cut(s) 792
BseMII CTCAG 2 cut(s) 602, 1293
BseNI ACTGG 4 cut(s) 439, 774, 961, 1049
BsePI GCGCGC 1 cut(s) 160
BsgI GTGCAG 2 cut(s) 237, 981
Bsh1236I CGCG 4 cut(s) 18, 162, 992, 994
BshFI GGCC 3 cut(s) 88, 324, 409
BsiSI CCGG 5 cut(s) 59, 105, 636, 1194, 1244
BslFI GGGAC 3 cut(s) 613, 1062, 1260
BslI CCNNNNNNNGG 6 cut(s) 655, 943, 1046, 1161, 1185, 1250
BsmAI GTCTC 2 cut(s) 483, 591
BsmFI GGGAC 3 cut(s) 613, 1062, 1260
BsnI GGCC 3 cut(s) 88, 324, 409
Bsp143I GATC 8 cut(s) 181, 224, 642, 818, 987, 1036, 1090, 1200
Bsp1720I GCTNAGC 1 cut(s) 390
Bsp19I CCATGG 1 cut(s) 1204
BspACI CCGC 9 cut(s) 62, 108, 119, 153, 881, 994, 1059, 1076, 1169
BspANI GGCC 3 cut(s) 88, 324, 409
BspCNI CTCAG 2 cut(s) 601, 1294
BspFNI CGCG 4 cut(s) 18, 162, 992, 994
BspLI GGNNCC 3 cut(s) 66, 634, 1146
BspMAI CTGCAG 1 cut(s) 1069
BspMI ACCTGC 2 cut(s) 341, 1058
BspPI GGATC 5 cut(s) 232, 637, 826, 1031, 1195
BsrDI GCAATG 1 cut(s) 792
BsrFI RCCGGY 2 cut(s) 104, 1193
BsrI ACTGG 4 cut(s) 439, 774, 961, 1049
BssAI RCCGGY 2 cut(s) 104, 1193
BssECI CCNNGG 2 cut(s) 89, 1204
BssHII GCGCGC 1 cut(s) 160
BssMI GATC 8 cut(s) 181, 224, 642, 818, 987, 1036, 1090, 1200
BssT1I CCWWGG 2 cut(s) 89, 1204
Bst2UI CCWGG 1 cut(s) 491
Bst4CI ACNGT 5 cut(s) 760, 790, 845, 952, 1213
Bst6I CTCTTC 2 cut(s) 486, 1027
BstAPI GCANNNNNTGC 2 cut(s) 530, 1073
BstC8I GCNNGC 6 cut(s) 106, 162, 322, 379, 964, 1017
BstDEI CTNAG 7 cut(s) 390, 516, 588, 799, 1098, 1184, 1302
BstDSI CCRYGG 1 cut(s) 1204
BstENI CCTNNNNNAGG 3 cut(s) 941, 1159, 1183
BstF5I GGATG 4 cut(s) 645, 922, 1141, 1171
BstFNI CGCG 4 cut(s) 18, 162, 992, 994
BstHHI GCGC 4 cut(s) 20, 162, 164, 994
BstKTI GATC 8 cut(s) 184, 227, 645, 821, 990, 1039, 1093, 1203
BstMAI GTCTC 2 cut(s) 483, 591
BstMBI GATC 8 cut(s) 181, 224, 642, 818, 987, 1036, 1090, 1200
BstNI CCWGG 1 cut(s) 491
BstNSI RCATGY 2 cut(s) 873, 936
BstSCI CCNGG 3 cut(s) 489, 635, 1243
BstSFI CTRYAG 1 cut(s) 1065
BstUI CGCG 4 cut(s) 18, 162, 992, 994
BstX2I RGATCY 2 cut(s) 1036, 1200
BstYI RGATCY 2 cut(s) 1036, 1200
Bsu36I CCTNAGG 1 cut(s) 1184
BsuRI GGCC 3 cut(s) 88, 324, 409
BtgI CCRYGG 1 cut(s) 1204
BtgZI GCGATG 1 cut(s) 1039
BtsCI GGATG 4 cut(s) 645, 922, 1141, 1171
BtsI GCAGTG 3 cut(s) 543, 706, 973
BtsIMutI CAGTG 5 cut(s) 432, 543, 706, 957, 973
BveI ACCTGC 2 cut(s) 341, 1058
Cac8I GCNNGC 6 cut(s) 106, 162, 322, 379, 964, 1017
CaiI CAGNNNCTG 1 cut(s) 956
CfoI GCGC 4 cut(s) 20, 162, 164, 994
Cfr10I RCCGGY 2 cut(s) 104, 1193
Cfr13I GGNCC 2 cut(s) 86, 1241
CseI GACGC 1 cut(s) 1059
CsiI ACCWGGT 1 cut(s) 489
Csp6I GTAC 3 cut(s) 777, 857, 1306
CviAII CATG 6 cut(s) 664, 870, 933, 1205, 1250, 1260
CviQI GTAC 3 cut(s) 777, 857, 1306
DdeI CTNAG 7 cut(s) 390, 516, 588, 799, 1098, 1184, 1302
DpnI GATC 8 cut(s) 183, 226, 644, 820, 989, 1038, 1092, 1202
DpnII GATC 8 cut(s) 181, 224, 642, 818, 987, 1036, 1090, 1200
EaeI YGGCCR 1 cut(s) 322
Eam1104I CTCTTC 2 cut(s) 486, 1027
EarI CTCTTC 2 cut(s) 486, 1027
EciI GGCGGA 1 cut(s) 123
Eco130I CCWWGG 2 cut(s) 89, 1204
Eco32I GATATC 1 cut(s) 831
Eco47I GGWCC 1 cut(s) 1241
Eco57I CTGAAG 1 cut(s) 996
Eco81I CCTNAGG 1 cut(s) 1184
EcoNI CCTNNNNNAGG 3 cut(s) 941, 1159, 1183
EcoO109I RGGNCCY 1 cut(s) 86
EcoRII CCWGG 1 cut(s) 489
EcoRV GATATC 1 cut(s) 831
EcoT14I CCWWGG 2 cut(s) 89, 1204
ErhI CCWWGG 2 cut(s) 89, 1204
FaeI CATG 6 cut(s) 667, 873, 936, 1208, 1253, 1263
FalI AAGNNNNNCTT 2 cut(s) 858, 890
FaqI GGGAC 3 cut(s) 613, 1062, 1260
FatI CATG 6 cut(s) 663, 869, 932, 1204, 1249, 1259
FauI CCCGC 1 cut(s) 1069
FbaI TGATCA 1 cut(s) 1090
FblI GTMKAC 1 cut(s) 762
FokI GGATG 4 cut(s) 652, 929, 1148, 1178
FspBI CTAG 3 cut(s) 804, 1115, 1173
GlaI GCGC 4 cut(s) 19, 161, 163, 993
HaeIII GGCC 3 cut(s) 88, 324, 409
HapII CCGG 5 cut(s) 59, 105, 636, 1194, 1244
HgaI GACGC 1 cut(s) 1059
HhaI GCGC 4 cut(s) 20, 162, 164, 994
Hin1II CATG 6 cut(s) 667, 873, 936, 1208, 1253, 1263
Hin6I GCGC 4 cut(s) 18, 160, 162, 992
HinP1I GCGC 4 cut(s) 18, 160, 162, 992
HindIII AAGCTT 3 cut(s) 11, 742, 1100
HinfI GANTC 2 cut(s) 129, 428
HpaII CCGG 5 cut(s) 59, 105, 636, 1194, 1244
HphI GGTGA 6 cut(s) 356, 498, 505, 1130, 1208, 1247
Hpy166II GTNNAC 2 cut(s) 763, 1308
Hpy188I TCNGA 2 cut(s) 69, 292
Hpy188III TCNNGA 4 cut(s) 359, 547, 816, 875
Hpy8I GTNNAC 2 cut(s) 763, 1308
HpyAV CCTTC 2 cut(s) 917, 1165
HpyCH4III ACNGT 5 cut(s) 760, 790, 845, 952, 1213
HpyCH4IV ACGT 3 cut(s) 54, 204, 1287
HpyCH4V TGCA 9 cut(s) 188, 254, 270, 335, 350, 533, 889, 962, 1067
HpyF3I CTNAG 7 cut(s) 390, 516, 588, 799, 1098, 1184, 1302
HpySE526I ACGT 3 cut(s) 54, 204, 1287
Hsp92II CATG 6 cut(s) 667, 873, 936, 1208, 1253, 1263
HspAI GCGC 4 cut(s) 18, 160, 162, 992
KroI GCCGGC 1 cut(s) 104
KroNI GCCGGC 1 cut(s) 106
Ksp22I TGATCA 1 cut(s) 1090
Kzo9I GATC 8 cut(s) 181, 224, 642, 818, 987, 1036, 1090, 1200
LmnI GCTCC 4 cut(s) 70, 81, 521, 926
LweI GCATC 8 cut(s) 199, 337, 520, 676, 868, 1013, 1062, 1156
MabI ACCWGGT 1 cut(s) 489
MaeI CTAG 3 cut(s) 804, 1115, 1173
MaeII ACGT 3 cut(s) 54, 204, 1287
MaeIII GTNAC 6 cut(s) 112, 193, 200, 946, 952, 1268
MalI GATC 8 cut(s) 183, 226, 644, 820, 989, 1038, 1092, 1202
MboI GATC 8 cut(s) 181, 224, 642, 818, 987, 1036, 1090, 1200
MboII GAAGA 4 cut(s) 473, 999, 1002, 1044
MflI RGATCY 2 cut(s) 1036, 1200
MlsI TGGCCA 1 cut(s) 324
MluCI AATT 2 cut(s) 579, 726
MluNI TGGCCA 1 cut(s) 324
MnlI CCTC 6 cut(s) 90, 118, 406, 844, 937, 964
Mox20I TGGCCA 1 cut(s) 324
MroNI GCCGGC 1 cut(s) 104
MscI TGGCCA 1 cut(s) 324
MseI TTAA 4 cut(s) 9, 281, 677, 840
MslI CAYNNNNRTG 1 cut(s) 437
Msp20I TGGCCA 1 cut(s) 324
MspA1I CMGCKG 2 cut(s) 251, 1061
MspI CCGG 5 cut(s) 59, 105, 636, 1194, 1244
MspR9I CCNGG 3 cut(s) 491, 637, 1245
MvaI CCWGG 1 cut(s) 491
MvnI CGCG 4 cut(s) 18, 162, 992, 994
NaeI GCCGGC 1 cut(s) 106
NciI CCSGG 2 cut(s) 637, 1245
NcoI CCATGG 1 cut(s) 1204
NdeII GATC 8 cut(s) 181, 224, 642, 818, 987, 1036, 1090, 1200
NgoMIV GCCGGC 1 cut(s) 104
NlaIII CATG 6 cut(s) 667, 873, 936, 1208, 1253, 1263
NlaIV GGNNCC 3 cut(s) 66, 634, 1146
NmuCI GTSAC 5 cut(s) 193, 200, 946, 952, 1268
NspI RCATGY 2 cut(s) 873, 936
OliI CACNNNNGTG 1 cut(s) 437
PauI GCGCGC 1 cut(s) 160
PcsI WCGNNNNNNNCGW 1 cut(s) 51
PdiI GCCGGC 1 cut(s) 106
PfeI GAWTC 2 cut(s) 129, 428
PflFI GACNNNGTC 1 cut(s) 1251
PfoI TCCNGGA 1 cut(s) 635
Psp6I CCWGG 1 cut(s) 489
PspGI CCWGG 1 cut(s) 489
PspN4I GGNNCC 3 cut(s) 66, 634, 1146
PspPI GGNCC 2 cut(s) 86, 1241
PstI CTGCAG 1 cut(s) 1069
PstNI CAGNNNCTG 1 cut(s) 956
PsuI RGATCY 2 cut(s) 1036, 1200
PsyI GACNNNGTC 1 cut(s) 1251
PteI GCGCGC 1 cut(s) 160
PvuII CAGCTG 1 cut(s) 251
RsaI GTAC 3 cut(s) 778, 858, 1307
RsaNI GTAC 3 cut(s) 777, 857, 1306
RseI CAYNNNNRTG 1 cut(s) 437
SaqAI TTAA 4 cut(s) 9, 281, 677, 840
Sau3AI GATC 8 cut(s) 181, 224, 642, 818, 987, 1036, 1090, 1200
Sau96I GGNCC 2 cut(s) 86, 1241
ScrFI CCNGG 3 cut(s) 491, 637, 1245
SexAI ACCWGGT 1 cut(s) 489
SfaNI GCATC 8 cut(s) 199, 337, 520, 676, 868, 1013, 1062, 1156
SfcI CTRYAG 1 cut(s) 1065
SinI GGWCC 1 cut(s) 1241
SmiMI CAYNNNNRTG 1 cut(s) 437
SmlI CTYRAG 2 cut(s) 81, 1273
SmoI CTYRAG 2 cut(s) 81, 1273
Sse9I AATT 2 cut(s) 579, 726
SsiI CCGC 9 cut(s) 62, 108, 119, 153, 881, 994, 1059, 1076, 1169
SspMI CTAG 3 cut(s) 804, 1115, 1173
StyD4I CCNGG 3 cut(s) 489, 635, 1243
StyI CCWWGG 2 cut(s) 89, 1204
TaaI ACNGT 5 cut(s) 760, 790, 845, 952, 1213
TaiI ACGT 3 cut(s) 57, 207, 1290
TaqI TCGA 2 cut(s) 1105, 1158
TasI AATT 2 cut(s) 579, 726
TatI WGTACW 2 cut(s) 856, 1305
TauI GCSGC 4 cut(s) 65, 122, 1061, 1172
TfiI GAWTC 2 cut(s) 129, 428
Tru1I TTAA 4 cut(s) 9, 281, 677, 840
Tru9I TTAA 4 cut(s) 9, 281, 677, 840
TscAI CASTG 5 cut(s) 439, 543, 706, 957, 973
TseFI GTSAC 5 cut(s) 193, 200, 946, 952, 1268
Tsp45I GTSAC 5 cut(s) 193, 200, 946, 952, 1268
TspGWI ACGGA 2 cut(s) 53, 780
TspRI CASTG 5 cut(s) 439, 543, 706, 957, 973
Tth111I GACNNNGTC 1 cut(s) 1251
VpaK11BI GGWCC 1 cut(s) 1241
XagI CCTNNNNNAGG 3 cut(s) 941, 1159, 1183
XceI RCATGY 2 cut(s) 873, 936
XmiI GTMKAC 1 cut(s) 762
XspI CTAG 3 cut(s) 804, 1115, 1173
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.