Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0012308

Physical Location & Seq

Genomic Coordinates Reverse (-)

12642509 .. 12649102

Gene Structure 6594 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g19110.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1710 bp

ATGGAGGCCGTTCATTTGCCCACCGTTTCTTCCCGCCATTTCTCCCCCACCACCGCCGCCACCTTCCGCGACTCAAACCATATTCCGGCGCCCAAATTCGGCTCTTCCTGGACCGCTGCTGCTTCACGCTCTCCTACTCGCCTCTCTTCTCGAAACTTGTTCACTAGAGAGATTTGGGGCTGGGTGAATGCCAAGAAAGTTACCAGCGGTAGAAAAGAGTTACGTGGAGTTGTGAGAGCTGAGATGTTTGGCCAGTTGACCAGTGGCCTCGAATCGGCTTGGAACAAGCTCAAGGGCGAAGAGGTTTTGACCAAGGAGAATATAGTGGAGCCAATGAGGGAGATAAGGAGGGCGCTTTTGGAAGCTGATGTGAGTCTTCCTGTTGTAAGAAGGTTTGTGCAAGCTGTTAGTGACCAGGCTGTCGGTGTTGGGGTTATTCGCGGAGTCAAACCGGATCAGCAGTTGGTTAAGATTGTGCGTGATGAGCTAGTGAAACTGATGGGAGGGGAGGTATCTGAACTTGCTTTTGCAAAATCCAAGCCTAGTGTTATTTTATTGGCCGGTTTACAAGGAGTTGGGAAAACAACAGTATGTGCAAAATTGGCTTATTACCTTAAGAAACAGGGGAAGAGTTGTATGCTTGTTGCTGGTGATGTGTACAGACCTGCTGCTATTGATCAACTTGTTATTTTGGGTGAACAGGTAAAAGTGCCTGTATATACAGCAGGGACTGACATTAAACCTTCAGAAATAGCTAGGCAAGGTTTAGGGGAGGCCAAAAAGAAGAACATAGATGTAGTAATAATGGATACTGCTGGAAGGCTTCAGATAGACAAAGTACTGATGGATGAGTTGAAAGAAGTAAAGCGGGAATTGAACCCCACTGAAACTTTACTTGTTGTGGATGCAATGACTGGCCAGGAAGCTGCAGCCCTGGTCACGACATTCAATGTAGAGATTGGGATTACTGGAGCTATTTTAACAAAGCTAGATGGAGATTCTAGAGGTGGAGCAGCTTTAAGTGTTAAAGAGGTATCAGGAAAACCTATCAAGCTTGTTGGCCGAGGAGAGCGGATGGAGGACCTTGAACCTTTTTACCCAGATCGTATGGCAGGACGCATATTGGGAATGGGAGATGTTCTCTCATTTGTGGAGAAGGCACAAGAAGTTATGCGACAAGAAGATGCTGAAGAATTGCAAAAGAAGATTATGAGTACAAAGTTTGACTTCAATGATTTCCTAAAGCAAACTCGTGCTGTTGCACGTATGGGGTCCATGACTCGGGTTCTTGGAATGATCCCTGGTATGGGGAAGGTTACTCCTGCACAAATTCGAGAGGCAGAAAAGAGTTTATTGATAATGGAATCTATGATCGAAGCAATGACACCTGAGGAAAGAGAGAAGCCAGAATTGTTGGCTGAATCTCCCATCAGGAGAAAAAGAATAGCTCAAGAGTCTGGAAAAACAGAGCAGCAGGTGAGCCAACTTGTTGCTCAACTCTTCCAAATGCGAGTTCGTATGAAGAATCTAATGGGTGCAATGGAGGGCGGTGGATCTATACCTGGACTGAACAATCTTGAGGAAGCCCTCAAAGTTGATCAGAAGGCTCCTGCCGGTACTGCAAGGCGTAAGCGACGATCTGAACCAAGGAGGCAGTTTGGTGATTCGGCATCAAGGCCCAGTCCTCGTGGTTTTGGGGTGAGGAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0016043 GO:0019904 GO:0022607 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0051259 GO:0051291 GO:0065003 GO:0070206 GO:0070208 GO:0071840

KEGG Pathways

Metabolic & Signaling

ko02024 ko03060 ko03070 map02024 map03060 map03070

Pfam Domains

Protein Families

SRP54 SRP54_N SRP_SPB

Protein Analysis

570

Amino Acids

62.51

Weight (kDa)

9.66

Isoelectric Point (pI)

45.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SRP54_N	PF02881	5 - 82	3.3e-19	SRP54-type protein, helical bundle domain
SRP54	PF00448	100 - 295	2.1e-76	SRP54-type protein, GTPase domain
CbiA	PF01656	110 - 254	1.3e-06	CobQ/CobB/MinD/ParA nucleotide binding domain
SRP_SPB	PF02978	326 - 426	4e-24	Signal peptide binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012308)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G03940
fragaria_vesca	FvH4_6g19110 FvH4_6g19110
malus_domestica	MD12G1027100.v1.1 MD14G1027200.v1.1
prunus_persica	Prupe.7G104500_v2.0.a1
pyrus_communis	pycom12g02600 pycom14g02590
rosa_chinensis	RchiOBHm_Chr3g0474211
rosa_laevigata	RLG00000023941
rosa_multiflora	Rmu_sc0004507.1_g000022 Rmu_sc0015051.1_g000004
rosa_roxburghii	Rroxscaffold_6G00407430
rosa_rugosa	Rorug03G0139500
rosa_samantha	Rh3AG190000 Rh3BG219200 Rh3CG214600 Rh3DG214700
rosa_wichuraiana	Rw3G017330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1465
AasI	GACNNNNNNGTC	1 cut(s)	419
Acc36I	ACCTGC	2 cut(s)	673, 1465
AccB1I	GGYRCC	1 cut(s)	88
AccBSI	CCGCTC	1 cut(s)	1072
AccII	CGCG	2 cut(s)	69, 441
AclWI	GGATC	3 cut(s)	462, 1291, 1561
AcoI	YGGCCR	4 cut(s)	250, 558, 916, 1060
AcsI	RAATTY	2 cut(s)	95, 1329
AcuI	CTGAAG	3 cut(s)	729, 809, 1209
AcyI	GRCGYC	1 cut(s)	89
AfaI	GTAC	4 cut(s)	659, 840, 1216, 1618
AfiI	CCNNNNNNNGG	6 cut(s)	85, 98, 274, 1281, 1306, 1307
AflII	CTTAAG	1 cut(s)	614
AgsI	TTSAA	5 cut(s)	856, 877, 949, 1088, 1231
AjnI	CCWGG	6 cut(s)	107, 414, 918, 933, 1300, 1561
AjuI	GAANNNNNNNTTGG	2 cut(s)	1497, 1529
AlwI	GGATC	3 cut(s)	462, 1291, 1561
AlwNI	CAGNNNCTG	1 cut(s)	731
Ama87I	CYCGRG	1 cut(s)	1281
AoxI	GGCC	8 cut(s)	6, 250, 265, 558, 774, 916, 1060, 1676
ApeKI	GCWGC	7 cut(s)	116, 119, 668, 926, 929, 1013, 1471
ApoI	RAATTY	2 cut(s)	95, 1329
AspLEI	GCGC	2 cut(s)	91, 355
AspS9I	GGNCC	4 cut(s)	111, 1081, 1272, 1677
AsuHPI	GGTGA	5 cut(s)	196, 662, 707, 1489, 1673
AvaI	CYCGRG	1 cut(s)	1281
AvaII	GGWCC	3 cut(s)	111, 1081, 1272
AxyI	CCTNAGG	1 cut(s)	1389
BalI	TGGCCA	2 cut(s)	252, 918
BanI	GGYRCC	1 cut(s)	88
BauI	CACGAG	2 cut(s)	1251, 1686
BbsI	GAAGAC	1 cut(s)	368
BbvI	GCAGC	7 cut(s)	103, 106, 655, 913, 941, 1025, 1483
BccI	CCATC	5 cut(s)	493, 838, 986, 1069, 1436
BciT130I	CCWGG	6 cut(s)	109, 416, 920, 935, 1302, 1563
BciVI	GTATCC	1 cut(s)	802
BclI	TGATCA	2 cut(s)	676, 1597
BfaI	CTAG	6 cut(s)	165, 488, 543, 756, 989, 1002
BfmI	CTRYAG	1 cut(s)	927
BfoI	RGCGCY	2 cut(s)	92, 356
BfrI	CTTAAG	1 cut(s)	614
BfuAI	ACCTGC	2 cut(s)	673, 1465
BfuI	GTATCC	1 cut(s)	802
BisI	GCNGC	8 cut(s)	57, 117, 120, 669, 927, 930, 1014, 1472
BlsI	GCNGC	8 cut(s)	58, 118, 121, 670, 928, 931, 1015, 1473
BmcAI	AGTACT	1 cut(s)	840
Bme1390I	CCNGG	6 cut(s)	109, 416, 920, 935, 1302, 1563
Bme18I	GGWCC	3 cut(s)	111, 1081, 1272
BmeT110I	CYCGRG	1 cut(s)	1281
BmgT120I	GGNCC	4 cut(s)	111, 1081, 1272, 1677
BmiI	GGNNCC	4 cut(s)	90, 330, 1273, 1608
BmrFI	CCNGG	6 cut(s)	109, 416, 920, 935, 1302, 1563
BmrI	ACTGGG	1 cut(s)	1674
BmsI	GCATC	3 cut(s)	895, 1174, 1679
BmuI	ACTGGG	1 cut(s)	1674
BpiI	GAAGAC	1 cut(s)	368
BplI	GAGNNNNNCTC	2 cut(s)	1125, 1157
BpmI	CTGGAG	1 cut(s)	990
BpuEI	CTTGAG	3 cut(s)	275, 1434, 1598
BsaAI	YACGTR	2 cut(s)	224, 1265
BsaHI	GRCGYC	1 cut(s)	89
BsaJI	CCNNGG	5 cut(s)	312, 933, 1063, 1300, 1646
BsaWI	WCCGGW	1 cut(s)	451
BsaXI	ACNNNNNCTCC	2 cut(s)	495, 525
Bsc4I	CCNNNNNNNGG	6 cut(s)	85, 98, 274, 1281, 1306, 1307
Bse118I	RCCGGY	2 cut(s)	560, 1613
Bse1I	ACTGG	5 cut(s)	253, 261, 919, 973, 1680
Bse21I	CCTNAGG	1 cut(s)	1389
Bse3DI	GCAATG	3 cut(s)	915, 1386, 1545
BseBI	CCWGG	6 cut(s)	109, 416, 920, 935, 1302, 1563
BseDI	CCNNGG	5 cut(s)	312, 933, 1063, 1300, 1646
BseGI	GGATG	3 cut(s)	853, 910, 1080
BseLI	CCNNNNNNNGG	6 cut(s)	85, 98, 274, 1281, 1306, 1307
BseMI	GCAATG	3 cut(s)	915, 1386, 1545
BseMII	CTCAG	2 cut(s)	231, 1380
BseNI	ACTGG	5 cut(s)	253, 261, 919, 973, 1680
BseRI	GAGGAG	1 cut(s)	1080
BseXI	GCAGC	7 cut(s)	103, 106, 655, 913, 941, 1025, 1483
BseYI	CCCAGC	1 cut(s)	180
BsgI	GTGCAG	1 cut(s)	1308
Bsh1236I	CGCG	2 cut(s)	69, 441
BshFI	GGCC	8 cut(s)	8, 252, 267, 560, 776, 918, 1062, 1678
BshNI	GGYRCC	1 cut(s)	88
BsiHKCI	CYCGRG	1 cut(s)	1281
BsiSI	CCGG	4 cut(s)	86, 452, 561, 1614
BslFI	GGGAC	1 cut(s)	742
BslI	CCNNNNNNNGG	6 cut(s)	85, 98, 274, 1281, 1306, 1307
BsmFI	GGGAC	1 cut(s)	742
BsmI	GAATGC	1 cut(s)	193
BsnI	GGCC	8 cut(s)	8, 252, 267, 560, 776, 918, 1062, 1678
BsoBI	CYCGRG	1 cut(s)	1281
Bsp1407I	TGTACA	1 cut(s)	657
Bsp143I	GATC	8 cut(s)	454, 676, 1102, 1296, 1371, 1553, 1597, 1637
BspANI	GGCC	8 cut(s)	8, 252, 267, 560, 776, 918, 1062, 1678
BspCNI	CTCAG	2 cut(s)	232, 1381
BspFNI	CGCG	2 cut(s)	69, 441
BspLI	GGNNCC	4 cut(s)	90, 330, 1273, 1608
BspMAI	CTGCAG	1 cut(s)	931
BspMI	ACCTGC	2 cut(s)	673, 1465
BspPI	GGATC	3 cut(s)	462, 1291, 1561
BspQI	GCTCTTC	1 cut(s)	109
BspT107I	GGYRCC	1 cut(s)	88
BspTI	CTTAAG	1 cut(s)	614
BsrBI	CCGCTC	1 cut(s)	1072
BsrDI	GCAATG	3 cut(s)	915, 1386, 1545
BsrFI	RCCGGY	2 cut(s)	560, 1613
BsrGI	TGTACA	1 cut(s)	657
BsrI	ACTGG	5 cut(s)	253, 261, 919, 973, 1680
BssAI	RCCGGY	2 cut(s)	560, 1613
BssECI	CCNNGG	5 cut(s)	312, 933, 1063, 1300, 1646
BssMI	GATC	8 cut(s)	454, 676, 1102, 1296, 1371, 1553, 1597, 1637
BssNI	GRCGYC	1 cut(s)	89
BssSI	CACGAG	2 cut(s)	1251, 1686
BssT1I	CCWWGG	2 cut(s)	312, 1646
Bst2BI	CACGAG	2 cut(s)	1251, 1686
Bst2UI	CCWGG	6 cut(s)	109, 416, 920, 935, 1302, 1563
Bst4CI	ACNGT	2 cut(s)	25, 589
Bst6I	CTCTTC	5 cut(s)	109, 151, 294, 623, 1505
BstACI	GRCGYC	1 cut(s)	89
BstAFI	CTTAAG	1 cut(s)	614
BstAUI	TGTACA	1 cut(s)	657
BstBAI	YACGTR	2 cut(s)	224, 1265
BstC8I	GCNNGC	1 cut(s)	402
BstDEI	CTNAG	2 cut(s)	240, 1389
BstF5I	GGATG	3 cut(s)	853, 910, 1080
BstFNI	CGCG	2 cut(s)	69, 441
BstH2I	RGCGCY	2 cut(s)	92, 356
BstHHI	GCGC	2 cut(s)	91, 355
BstKTI	GATC	8 cut(s)	457, 679, 1105, 1299, 1374, 1556, 1600, 1640
BstMBI	GATC	8 cut(s)	454, 676, 1102, 1296, 1371, 1553, 1597, 1637
BstMWI	GCNNNNNNNGC	3 cut(s)	484, 602, 1619
BstNI	CCWGG	6 cut(s)	109, 416, 920, 935, 1302, 1563
BstSCI	CCNGG	6 cut(s)	107, 414, 918, 933, 1300, 1561
BstSFI	CTRYAG	1 cut(s)	927
BstUI	CGCG	2 cut(s)	69, 441
BstV1I	GCAGC	7 cut(s)	103, 106, 655, 913, 941, 1025, 1483
BstV2I	GAAGAC	1 cut(s)	368
BstX2I	RGATCY	1 cut(s)	1553
BstYI	RGATCY	1 cut(s)	1553
Bsu36I	CCTNAGG	1 cut(s)	1389
BsuI	GTATCC	1 cut(s)	802
BsuRI	GGCC	8 cut(s)	8, 252, 267, 560, 776, 918, 1062, 1678
BtsCI	GGATG	3 cut(s)	853, 910, 1080
BtsIMutI	CAGTG	2 cut(s)	268, 882
BveI	ACCTGC	2 cut(s)	673, 1465
Cac8I	GCNNGC	1 cut(s)	402
CaiI	CAGNNNCTG	1 cut(s)	731
CfoI	GCGC	2 cut(s)	91, 355
Cfr10I	RCCGGY	2 cut(s)	560, 1613
Cfr13I	GGNCC	4 cut(s)	111, 1081, 1272, 1677
CseI	GACGC	1 cut(s)	1125
Csp6I	GTAC	4 cut(s)	658, 839, 1215, 1617
CviAII	CATG	1 cut(s)	1276
CviQI	GTAC	4 cut(s)	658, 839, 1215, 1617
DdeI	CTNAG	2 cut(s)	240, 1389
DinI	GGCGCC	1 cut(s)	90
DpnI	GATC	8 cut(s)	456, 678, 1104, 1298, 1373, 1555, 1599, 1639
DpnII	GATC	8 cut(s)	454, 676, 1102, 1296, 1371, 1553, 1597, 1637
DrdI	GACNNNNNNGTC	1 cut(s)	419
DseDI	GACNNNNNNGTC	1 cut(s)	419
EaeI	YGGCCR	4 cut(s)	250, 558, 916, 1060
Eam1104I	CTCTTC	5 cut(s)	109, 151, 294, 623, 1505
EarI	CTCTTC	5 cut(s)	109, 151, 294, 623, 1505
Eco130I	CCWWGG	2 cut(s)	312, 1646
Eco47I	GGWCC	3 cut(s)	111, 1081, 1272
Eco57I	CTGAAG	3 cut(s)	729, 809, 1209
Eco81I	CCTNAGG	1 cut(s)	1389
Eco88I	CYCGRG	1 cut(s)	1281
EcoO109I	RGGNCCY	1 cut(s)	1081
EcoRII	CCWGG	6 cut(s)	107, 414, 918, 933, 1300, 1561
EcoT14I	CCWWGG	2 cut(s)	312, 1646
EgeI	GGCGCC	1 cut(s)	90
EheI	GGCGCC	1 cut(s)	90
ErhI	CCWWGG	2 cut(s)	312, 1646
FaeI	CATG	1 cut(s)	1279
FalI	AAGNNNNNCTT	2 cut(s)	1211, 1243
FaqI	GGGAC	1 cut(s)	742
FatI	CATG	1 cut(s)	1275
FauI	CCCGC	2 cut(s)	41, 861
FbaI	TGATCA	2 cut(s)	676, 1597
Fnu4HI	GCNGC	8 cut(s)	57, 117, 120, 669, 927, 930, 1014, 1472
FokI	GGATG	3 cut(s)	860, 917, 1087
Fsp4HI	GCNGC	8 cut(s)	57, 117, 120, 669, 927, 930, 1014, 1472
FspBI	CTAG	6 cut(s)	165, 488, 543, 756, 989, 1002
GlaI	GCGC	2 cut(s)	90, 354
GluI	GCNGC	8 cut(s)	57, 117, 120, 669, 927, 930, 1014, 1472
GsaI	CCCAGC	1 cut(s)	184
GsuI	CTGGAG	1 cut(s)	990
HaeII	RGCGCY	2 cut(s)	92, 356
HaeIII	GGCC	8 cut(s)	8, 252, 267, 560, 776, 918, 1062, 1678
HapII	CCGG	4 cut(s)	86, 452, 561, 1614
HgaI	GACGC	1 cut(s)	1125
HhaI	GCGC	2 cut(s)	91, 355
Hin1I	GRCGYC	1 cut(s)	89
Hin1II	CATG	1 cut(s)	1279
Hin6I	GCGC	2 cut(s)	89, 353
HinP1I	GCGC	2 cut(s)	89, 353
HincII	GTYRAC	1 cut(s)	258
HindII	GTYRAC	1 cut(s)	258
HindIII	AAGCTT	1 cut(s)	1052
HpaII	CCGG	4 cut(s)	86, 452, 561, 1614
HphI	GGTGA	5 cut(s)	196, 662, 707, 1489, 1673
Hpy166II	GTNNAC	5 cut(s)	162, 258, 566, 658, 698
Hpy188I	TCNGA	5 cut(s)	517, 748, 828, 1602, 1642
Hpy188III	TCNNGA	9 cut(s)	150, 940, 1002, 1038, 1334, 1432, 1451, 1458, 1577
Hpy8I	GTNNAC	5 cut(s)	162, 258, 566, 658, 698
Hpy99I	CGWCG	1 cut(s)	1638
HpyAV	CCTTC	7 cut(s)	73, 384, 753, 813, 1150, 1306, 1597
HpyCH4III	ACNGT	2 cut(s)	25, 589
HpyCH4IV	ACGT	2 cut(s)	223, 1264
HpyF10VI	GCNNNNNNNGC	3 cut(s)	484, 602, 1619
HpyF3I	CTNAG	2 cut(s)	240, 1389
HpySE526I	ACGT	2 cut(s)	223, 1264
Hsp92I	GRCGYC	1 cut(s)	89
Hsp92II	CATG	1 cut(s)	1279
HspAI	GCGC	2 cut(s)	89, 353
KasI	GGCGCC	1 cut(s)	88
Ksp22I	TGATCA	2 cut(s)	676, 1597
Kzo9I	GATC	8 cut(s)	454, 676, 1102, 1296, 1371, 1553, 1597, 1637
LguI	GCTCTTC	1 cut(s)	109
LmnI	GCTCC	4 cut(s)	328, 971, 1010, 1612
Lsp1109I	GCAGC	7 cut(s)	103, 106, 655, 913, 941, 1025, 1483
LweI	GCATC	3 cut(s)	895, 1174, 1679
MaeI	CTAG	6 cut(s)	165, 488, 543, 756, 989, 1002
MaeII	ACGT	2 cut(s)	223, 1264
MaeIII	GTNAC	5 cut(s)	199, 219, 410, 937, 1315
MalI	GATC	8 cut(s)	456, 678, 1104, 1298, 1373, 1555, 1599, 1639
MbiI	CCGCTC	1 cut(s)	1072
MboI	GATC	8 cut(s)	454, 676, 1102, 1296, 1371, 1553, 1597, 1637
MflI	RGATCY	1 cut(s)	1553
MlsI	TGGCCA	2 cut(s)	252, 918
MluCI	AATT	6 cut(s)	95, 599, 872, 1193, 1329, 1409
MluNI	TGGCCA	2 cut(s)	252, 918
Mly113I	GGCGCC	1 cut(s)	89
MlyI	GAGTC	5 cut(s)	65, 382, 453, 1273, 1463
Mox20I	TGGCCA	2 cut(s)	252, 918
MscI	TGGCCA	2 cut(s)	252, 918
MseI	TTAA	6 cut(s)	468, 615, 738, 980, 1019, 1026
Msp20I	TGGCCA	2 cut(s)	252, 918
MspA1I	CMGCKG	2 cut(s)	116, 207
MspCI	CTTAAG	1 cut(s)	614
MspI	CCGG	4 cut(s)	86, 452, 561, 1614
MspR9I	CCNGG	6 cut(s)	109, 416, 920, 935, 1302, 1563
Mva1269I	GAATGC	1 cut(s)	193
MvaI	CCWGG	6 cut(s)	109, 416, 920, 935, 1302, 1563
MvnI	CGCG	2 cut(s)	69, 441
MwoI	GCNNNNNNNGC	3 cut(s)	484, 602, 1619
NarI	GGCGCC	1 cut(s)	89
NdeII	GATC	8 cut(s)	454, 676, 1102, 1296, 1371, 1553, 1597, 1637
NlaIII	CATG	1 cut(s)	1279
NlaIV	GGNNCC	4 cut(s)	90, 330, 1273, 1608
NmeAIII	GCCGAG	1 cut(s)	1088
NmuCI	GTSAC	2 cut(s)	410, 937
PaqCI	CACCTGC	1 cut(s)	1465
PciSI	GCTCTTC	1 cut(s)	109
PctI	GAATGC	1 cut(s)	193
PfeI	GAWTC	6 cut(s)	272, 998, 1364, 1421, 1525, 1664
PfoI	TCCNGGA	1 cut(s)	107
PkrI	GCNGC	8 cut(s)	58, 118, 121, 670, 928, 931, 1015, 1473
PleI	GAGTC	5 cut(s)	65, 381, 452, 1273, 1462
PluTI	GGCGCC	1 cut(s)	92
PpsI	GAGTC	5 cut(s)	65, 381, 452, 1273, 1462
Ppu21I	YACGTR	2 cut(s)	224, 1265
PpuMI	RGGWCCY	1 cut(s)	1081
Psp5II	RGGWCCY	1 cut(s)	1081
Psp6I	CCWGG	6 cut(s)	107, 414, 918, 933, 1300, 1561
PspFI	CCCAGC	1 cut(s)	180
PspGI	CCWGG	6 cut(s)	107, 414, 918, 933, 1300, 1561
PspN4I	GGNNCC	4 cut(s)	90, 330, 1273, 1608
PspPI	GGNCC	4 cut(s)	111, 1081, 1272, 1677
PspPPI	RGGWCCY	1 cut(s)	1081
PstI	CTGCAG	1 cut(s)	931
PstNI	CAGNNNCTG	1 cut(s)	731
PsuI	RGATCY	1 cut(s)	1553
RsaI	GTAC	4 cut(s)	659, 840, 1216, 1618
RsaNI	GTAC	4 cut(s)	658, 839, 1215, 1617
SapI	GCTCTTC	1 cut(s)	109
SaqAI	TTAA	6 cut(s)	468, 615, 738, 980, 1019, 1026
SatI	GCNGC	8 cut(s)	57, 117, 120, 669, 927, 930, 1014, 1472
Sau3AI	GATC	8 cut(s)	454, 676, 1102, 1296, 1371, 1553, 1597, 1637
Sau96I	GGNCC	4 cut(s)	111, 1081, 1272, 1677
ScaI	AGTACT	1 cut(s)	840
SchI	GAGTC	5 cut(s)	65, 382, 453, 1273, 1463
ScrFI	CCNGG	6 cut(s)	109, 416, 920, 935, 1302, 1563
SfaNI	GCATC	3 cut(s)	895, 1174, 1679
SfcI	CTRYAG	1 cut(s)	927
SfoI	GGCGCC	1 cut(s)	90
SinI	GGWCC	3 cut(s)	111, 1081, 1272
SmlI	CTYRAG	4 cut(s)	290, 614, 1449, 1577
SmoI	CTYRAG	4 cut(s)	290, 614, 1449, 1577
Sse9I	AATT	6 cut(s)	95, 599, 872, 1193, 1329, 1409
SspDI	GGCGCC	1 cut(s)	88
SspMI	CTAG	6 cut(s)	165, 488, 543, 756, 989, 1002
StyD4I	CCNGG	6 cut(s)	107, 414, 918, 933, 1300, 1561
StyI	CCWWGG	2 cut(s)	312, 1646
TaaI	ACNGT	2 cut(s)	25, 589
TaiI	ACGT	2 cut(s)	226, 1267
TaqI	TCGA	4 cut(s)	151, 270, 1333, 1374
TasI	AATT	6 cut(s)	95, 599, 872, 1193, 1329, 1409
TatI	WGTACW	3 cut(s)	657, 838, 1214
TauI	GCSGC	1 cut(s)	59
TfiI	GAWTC	6 cut(s)	272, 998, 1364, 1421, 1525, 1664
Tru1I	TTAA	6 cut(s)	468, 615, 738, 980, 1019, 1026
Tru9I	TTAA	6 cut(s)	468, 615, 738, 980, 1019, 1026
TscAI	CASTG	2 cut(s)	268, 889
TseFI	GTSAC	2 cut(s)	410, 937
TseI	GCWGC	7 cut(s)	116, 119, 668, 926, 929, 1013, 1471
Tsp45I	GTSAC	2 cut(s)	410, 937
TspDTI	ATGAA	1 cut(s)	1535
TspRI	CASTG	2 cut(s)	268, 889
Vha464I	CTTAAG	1 cut(s)	614
VpaK11BI	GGWCC	3 cut(s)	111, 1081, 1272
XapI	RAATTY	2 cut(s)	95, 1329
XbaI	TCTAGA	1 cut(s)	1001
XcmI	CCANNNNNNNNNTGG	1 cut(s)	260
XspI	CTAG	6 cut(s)	165, 488, 543, 756, 989, 1002
ZrmI	AGTACT	1 cut(s)	840

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.