Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0012308

Physical Location & Seq

Genomic Coordinates Forward (+)

30097254 .. 30103404

Gene Structure 6151 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00407430.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2055 bp

ATGGAGGCCGTACATTTCCCGACCGTTTCTTCCCGCCATTTTTCCACGACGACCACGAACAGAACCTTCTCCGATTCAAAAAGGATTCCGACGGCCAAACTGGGCTCTTCTTGGACTGCTCCACGCTCTCCTACTCGGCTCTCTTCTAGAAACTTGTTCACTAGAGAGATATGGGGTTGGGTAAATGCCAAGAAAGTTACCACCGGTAGAAGAGAGTTGCGTGGAATTGTGAGAGCTGAAATGTTTGGCCAATTGACCAGTGGCCTCGAATCCGCTTGGAACAAGCTCAAAGGCGAAGAGGTTTTGACCAAGGAAAATATTGTGGAGCCAATGAGAGAAATCAGGAGGGCTCTTTTGGAAGCTGATGTAAGCCTTCCTGTTGTAAGAAGGTTTGTGCAAGCTGTCAGTGACCAGGCTGTTGGTGTTGGGGTTATTCGCGGAGTCAAACCGGATCAGCAATTGGTTAAGATTGTGCGTGATGAGCTAGTGAAATTGATGGGAGGGGAGGTATCTGAACTTGCTTTTGCAAAATCCAGTCCCAGTGTTATTTTATTGGCTGGTTTACAAGGAGTTGGGAAGACAACAGTATGTGCGAAATTGGCTTATTACCTTAAGAAACAGGGGAAGAGTTGTATGCTGGTTGCTGGTGATGTGTACAGACCTGCTGCTATTGACCAACTTGTTATTTTGGGTGAACAGGTAAAAGTGCCTGTATATACAGCAGGGACTGACACCAAACCTTCACAAATAGCTAGGCAAGGTTTAGAGGAGGCCAAAAAGAAGAACATAGATGTAGTAATAATGGATACTGCTGGAAGGCTTCAGATAGACAAAGTACTGATGGATGAGTTGAAAGAAGTAAAGCGGGAATTGAACCCCACAGAAACTTTACTCGTTGTGGATGCAATGACTGGCCAGGAAGCTGCAGCCCTGGTCACGACATTCAATGTAGAGATTGGGATTACTGGCGCTATTTTAACAAAGCTGGATGGAGATTCTAGAGGTGGAGCAGCTTTGAGTGTTAAAGAGGTATCAGGAAAGCCAATCAAGCTTGTTGGCCGAGGAGAGCGGATGGAGGACCTTGAACCTTTTTACCCCGATCGTATGGCAGGACGCATATTGGGAATGGGAGATGTTCTCTCATTTGTCGAGAAGGCACAAGAAGTTATGCGCCAAGAAGATGCTGAAGAATTGCAAAAGAAGATTATGAGTACAAAGTTTGACTTCAATGATTTCCTAAAGCAAACTCGTGCTGTTGCACGTATGGGTTCCATGACTCGGGTTCTTGGAATGATCCCTGGTATGGGGAAGGTTACTCCTGCACAAATTCGAGAGGCAGAAAAGAGTTTAGTGATAATGGAATCTATGATTGAAGCAATGACACCTGAGGAAAGGGAGAAGCCAGAATTGTTGGCCGAATCTCCCATTAGGAGAAAAAGAATTGCTCAAGAGTCTGGGAAAACAGAGCAGCAGGTGAGCCAACTTGTTGCTCAACTGTTCCAAATGCGAGTTCGTATGAAGAATCTAATGGGTGCAATGGAAGGCGGTGGATCTATACCTGGACTGAACAATCTTGAGGAAGCCCTCAAAGTTGATCAGAAGTCTGCCTGCATCAGGCTCCTGCCGGTACTGCAAGGCGTAAGCGACGATCTGAACCAAGGAGGCAGTTTGGTGACTCGGCATCGAGGCCCAGTCCTCGTGGTTTCGGGGCCAGGAACTGAGAGAGCAGAGGAAGGGAGAATCCAGGCCAATGAGCTTTTCAAAATGGCAAGCCCAAAAATGAAGGAGGCAGCTTCAAAATTTCCAGAAGGTGATGCAGATGCAGAATTGAATCCAGGCAAACAGAAGAGTGTTGAAGCGGATCCCAAAGCGTCTGAAGTTACCTCCTTGCAGATGAAGCAACGAGCGGAGGCTGAAGACAACAAGAGAAAGGAAAAGAAGAAAGAGAAGAATGAATCGGTGCAAAAGCTCAAAACAACCATTGTAGTCTCCGGGGTAATTGTGGCTCTGATTGGGGCTATTTTCGCCTTAACCAAGAAAATGAGAGAGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0016043 GO:0019904 GO:0022607 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0051259 GO:0051291 GO:0065003 GO:0070206 GO:0070208 GO:0071840

KEGG Pathways

Metabolic & Signaling

ko02024 ko03060 ko03070 map02024 map03060 map03070

Pfam Domains

Protein Families

SRP54 SRP54_N SRP_SPB

Protein Analysis

684

Amino Acids

75.12

Weight (kDa)

9.43

Isoelectric Point (pI)

39.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SRP54_N	PF02881	85 - 162	5.3e-19	SRP54-type protein, helical bundle domain
Zeta_toxin	PF06414	176 - 284	6.6e-06	Zeta toxin
SRP54	PF00448	180 - 375	2e-77	SRP54-type protein, GTPase domain
CbiA	PF01656	190 - 333	4.1e-06	CobQ/CobB/MinD/ParA nucleotide binding domain
SRP_SPB	PF02978	406 - 506	3.3e-24	Signal peptide binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0012308)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G03940
fragaria_vesca	FvH4_6g19110 FvH4_6g19110
malus_domestica	MD12G1027100.v1.1 MD14G1027200.v1.1
prunus_persica	Prupe.7G104500_v2.0.a1
pyrus_communis	pycom12g02600 pycom14g02590
rosa_chinensis	RchiOBHm_Chr3g0474211
rosa_laevigata	RLG00000023941
rosa_multiflora	Rmu_sc0004507.1_g000022 Rmu_sc0015051.1_g000004
rosa_roxburghii	Rroxscaffold_6G00407430
rosa_rugosa	Rorug03G0139500
rosa_samantha	Rh3AG190000 Rh3BG219200 Rh3CG214600 Rh3DG214700
rosa_wichuraiana	Rw3G017330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1462
Acc36I	ACCTGC	2 cut(s)	670, 1462
AccBSI	CCGCTC	2 cut(s)	1069, 1907
AccII	CGCG	1 cut(s)	438
AciI	CCGC	8 cut(s)	34, 273, 438, 865, 1069, 1545, 1859, 1907
AclWI	GGATC	5 cut(s)	459, 1288, 1558, 1856, 1869
AcoI	YGGCCR	5 cut(s)	93, 247, 913, 1057, 1413
AcsI	RAATTY	2 cut(s)	1326, 1799
AcuI	CTGAAG	4 cut(s)	806, 1206, 1896, 1935
AfaI	GTAC	5 cut(s)	12, 656, 837, 1213, 1629
AfiI	CCNNNNNNNGG	4 cut(s)	1278, 1303, 1304, 1614
AflII	CTTAAG	1 cut(s)	611
AgeI	ACCGGT	1 cut(s)	203
AjnI	CCWGG	8 cut(s)	411, 915, 930, 1297, 1558, 1711, 1743, 1834
AjuI	GAANNNNNNNTTGG	4 cut(s)	1494, 1526, 1742, 1774
Alw26I	GTCTC	1 cut(s)	1993
AlwI	GGATC	5 cut(s)	459, 1288, 1558, 1856, 1869
AlwNI	CAGNNNCTG	2 cut(s)	728, 1718
Ama87I	CYCGRG	1 cut(s)	1278
ApeKI	GCWGC	6 cut(s)	665, 923, 926, 1010, 1468, 1790
ApoI	RAATTY	2 cut(s)	1326, 1799
AsiGI	ACCGGT	1 cut(s)	203
AspLEI	GCGC	2 cut(s)	971, 1173
AspS9I	GGNCC	3 cut(s)	1078, 1688, 1709
AsuC2I	CCSGG	1 cut(s)	1993
AsuHPI	GGTGA	5 cut(s)	659, 704, 1486, 1684, 1823
AvaI	CYCGRG	1 cut(s)	1278
AvaII	GGWCC	1 cut(s)	1078
AxyI	CCTNAGG	1 cut(s)	1386
BalI	TGGCCA	2 cut(s)	249, 915
BamHI	GGATCC	1 cut(s)	1861
BanII	GRGCYC	2 cut(s)	107, 352
BauI	CACGAG	2 cut(s)	1248, 1697
BbsI	GAAGAC	2 cut(s)	584, 1923
BbvI	GCAGC	6 cut(s)	652, 910, 938, 1022, 1480, 1802
BccI	CCATC	4 cut(s)	490, 835, 983, 1066
BceAI	ACGGC	1 cut(s)	108
BciT130I	CCWGG	8 cut(s)	413, 917, 932, 1299, 1560, 1713, 1745, 1836
BciVI	GTATCC	1 cut(s)	799
BclI	TGATCA	1 cut(s)	1594
BcnI	CCSGG	1 cut(s)	1993
BcoDI	GTCTC	1 cut(s)	1993
BfaI	CTAG	5 cut(s)	147, 162, 485, 753, 999
BfmI	CTRYAG	1 cut(s)	924
BfoI	RGCGCY	1 cut(s)	972
BfrI	CTTAAG	1 cut(s)	611
BfuAI	ACCTGC	2 cut(s)	670, 1462
BfuI	GTATCC	1 cut(s)	799
BisI	GCNGC	6 cut(s)	666, 924, 927, 1011, 1469, 1791
BlsI	GCNGC	6 cut(s)	667, 925, 928, 1012, 1470, 1792
BmcAI	AGTACT	1 cut(s)	837
Bme1390I	CCNGG	9 cut(s)	413, 917, 932, 1299, 1560, 1713, 1745, 1836, 1993
Bme18I	GGWCC	1 cut(s)	1078
BmeT110I	CYCGRG	1 cut(s)	1278
BmgT120I	GGNCC	3 cut(s)	1078, 1688, 1709
BmiI	GGNNCC	5 cut(s)	327, 1270, 1619, 1710, 1863
BmrFI	CCNGG	9 cut(s)	413, 917, 932, 1299, 1560, 1713, 1745, 1836, 1993
BmrI	ACTGGG	3 cut(s)	110, 534, 1685
BmsI	GCATC	6 cut(s)	892, 1171, 1620, 1690, 1804, 1810
BmuI	ACTGGG	3 cut(s)	110, 534, 1685
BpiI	GAAGAC	2 cut(s)	584, 1923
BplI	GAGNNNNNCTC	2 cut(s)	1122, 1154
BpuEI	CTTGAG	2 cut(s)	1431, 1595
BpuMI	CCSGG	1 cut(s)	1993
BsaAI	YACGTR	1 cut(s)	1262
BsaJI	CCNNGG	6 cut(s)	309, 930, 1060, 1297, 1657, 1992
BsaWI	WCCGGW	2 cut(s)	203, 448
BsaXI	ACNNNNNCTCC	2 cut(s)	492, 522
Bsc4I	CCNNNNNNNGG	4 cut(s)	1278, 1303, 1304, 1614
Bse118I	RCCGGY	2 cut(s)	203, 1624
Bse1I	ACTGG	7 cut(s)	105, 258, 534, 540, 916, 970, 1691
Bse21I	CCTNAGG	1 cut(s)	1386
Bse3DI	GCAATG	3 cut(s)	912, 1383, 1542
BseBI	CCWGG	8 cut(s)	413, 917, 932, 1299, 1560, 1713, 1745, 1836
BseDI	CCNNGG	6 cut(s)	309, 930, 1060, 1297, 1657, 1992
BseGI	GGATG	4 cut(s)	850, 907, 994, 1077
BseLI	CCNNNNNNNGG	4 cut(s)	1278, 1303, 1304, 1614
BseMI	GCAATG	3 cut(s)	912, 1383, 1542
BseMII	CTCAG	2 cut(s)	1377, 1710
BseNI	ACTGG	7 cut(s)	105, 258, 534, 540, 916, 970, 1691
BseRI	GAGGAG	2 cut(s)	782, 1077
BseXI	GCAGC	6 cut(s)	652, 910, 938, 1022, 1480, 1802
BsgI	GTGCAG	1 cut(s)	1305
Bsh1236I	CGCG	1 cut(s)	438
Bsh1285I	CGRYCG	2 cut(s)	24, 1102
BshTI	ACCGGT	1 cut(s)	203
BsiEI	CGRYCG	2 cut(s)	24, 1102
BsiHKCI	CYCGRG	1 cut(s)	1278
BsiSI	CCGG	4 cut(s)	204, 449, 1625, 1992
BslFI	GGGAC	2 cut(s)	522, 739
BslI	CCNNNNNNNGG	4 cut(s)	1278, 1303, 1304, 1614
BsmAI	GTCTC	1 cut(s)	1993
BsmFI	GGGAC	2 cut(s)	522, 739
BsoBI	CYCGRG	1 cut(s)	1278
Bsp1286I	GDGCHC	2 cut(s)	107, 352
Bsp1407I	TGTACA	1 cut(s)	654
Bsp143I	GATC	7 cut(s)	451, 1099, 1293, 1550, 1594, 1648, 1861
BspACI	CCGC	8 cut(s)	34, 273, 438, 865, 1069, 1545, 1859, 1907
BspCNI	CTCAG	2 cut(s)	1378, 1711
BspFNI	CGCG	1 cut(s)	438
BspLI	GGNNCC	5 cut(s)	327, 1270, 1619, 1710, 1863
BspMAI	CTGCAG	1 cut(s)	928
BspMI	ACCTGC	2 cut(s)	670, 1462
BspPI	GGATC	5 cut(s)	459, 1288, 1558, 1856, 1869
BspQI	GCTCTTC	1 cut(s)	112
BspTI	CTTAAG	1 cut(s)	611
BsrBI	CCGCTC	2 cut(s)	1069, 1907
BsrDI	GCAATG	3 cut(s)	912, 1383, 1542
BsrFI	RCCGGY	2 cut(s)	203, 1624
BsrGI	TGTACA	1 cut(s)	654
BsrI	ACTGG	7 cut(s)	105, 258, 534, 540, 916, 970, 1691
BssAI	RCCGGY	2 cut(s)	203, 1624
BssECI	CCNNGG	6 cut(s)	309, 930, 1060, 1297, 1657, 1992
BssMI	GATC	7 cut(s)	451, 1099, 1293, 1550, 1594, 1648, 1861
BssSI	CACGAG	2 cut(s)	1248, 1697
BssT1I	CCWWGG	2 cut(s)	309, 1657
Bst2BI	CACGAG	2 cut(s)	1248, 1697
Bst2UI	CCWGG	8 cut(s)	413, 917, 932, 1299, 1560, 1713, 1745, 1836
Bst4CI	ACNGT	3 cut(s)	25, 586, 1497
Bst6I	CTCTTC	6 cut(s)	112, 148, 205, 291, 620, 1841
BstAFI	CTTAAG	1 cut(s)	611
BstAUI	TGTACA	1 cut(s)	654
BstBAI	YACGTR	1 cut(s)	1262
BstC8I	GCNNGC	3 cut(s)	399, 1609, 1771
BstDEI	CTNAG	2 cut(s)	1386, 1719
BstENI	CCTNNNNNAGG	1 cut(s)	1612
BstF5I	GGATG	4 cut(s)	850, 907, 994, 1077
BstFNI	CGCG	1 cut(s)	438
BstH2I	RGCGCY	1 cut(s)	972
BstHHI	GCGC	2 cut(s)	971, 1173
BstKTI	GATC	7 cut(s)	454, 1102, 1296, 1553, 1597, 1651, 1864
BstMAI	GTCTC	1 cut(s)	1993
BstMBI	GATC	7 cut(s)	451, 1099, 1293, 1550, 1594, 1648, 1861
BstMCI	CGRYCG	2 cut(s)	24, 1102
BstMWI	GCNNNNNNNGC	6 cut(s)	481, 599, 1048, 1630, 1897, 2024
BstNI	CCWGG	8 cut(s)	413, 917, 932, 1299, 1560, 1713, 1745, 1836
BstSCI	CCNGG	9 cut(s)	411, 915, 930, 1297, 1558, 1711, 1743, 1834, 1991
BstSFI	CTRYAG	1 cut(s)	924
BstUI	CGCG	1 cut(s)	438
BstV1I	GCAGC	6 cut(s)	652, 910, 938, 1022, 1480, 1802
BstV2I	GAAGAC	2 cut(s)	584, 1923
BstX2I	RGATCY	2 cut(s)	1550, 1861
BstXI	CCANNNNNNTGG	1 cut(s)	419
BstYI	RGATCY	2 cut(s)	1550, 1861
Bsu36I	CCTNAGG	1 cut(s)	1386
BsuI	GTATCC	1 cut(s)	799
BtsCI	GGATG	4 cut(s)	850, 907, 994, 1077
BtsIMutI	CAGTG	3 cut(s)	265, 412, 547
BveI	ACCTGC	2 cut(s)	670, 1462
Cac8I	GCNNGC	3 cut(s)	399, 1609, 1771
CaiI	CAGNNNCTG	2 cut(s)	728, 1718
CfoI	GCGC	2 cut(s)	971, 1173
Cfr10I	RCCGGY	2 cut(s)	203, 1624
Cfr13I	GGNCC	3 cut(s)	1078, 1688, 1709
CseI	GACGC	2 cut(s)	1122, 1860
Csp6I	GTAC	5 cut(s)	11, 655, 836, 1212, 1628
CspAI	ACCGGT	1 cut(s)	203
CviAII	CATG	1 cut(s)	1273
CviQI	GTAC	5 cut(s)	11, 655, 836, 1212, 1628
DdeI	CTNAG	2 cut(s)	1386, 1719
DpnI	GATC	7 cut(s)	453, 1101, 1295, 1552, 1596, 1650, 1863
DpnII	GATC	7 cut(s)	451, 1099, 1293, 1550, 1594, 1648, 1861
EaeI	YGGCCR	5 cut(s)	93, 247, 913, 1057, 1413
Eam1104I	CTCTTC	6 cut(s)	112, 148, 205, 291, 620, 1841
EarI	CTCTTC	6 cut(s)	112, 148, 205, 291, 620, 1841
Eco130I	CCWWGG	2 cut(s)	309, 1657
Eco24I	GRGCYC	2 cut(s)	107, 352
Eco47I	GGWCC	1 cut(s)	1078
Eco57I	CTGAAG	4 cut(s)	806, 1206, 1896, 1935
Eco81I	CCTNAGG	1 cut(s)	1386
Eco88I	CYCGRG	1 cut(s)	1278
EcoNI	CCTNNNNNAGG	1 cut(s)	1612
EcoO109I	RGGNCCY	1 cut(s)	1078
EcoRII	CCWGG	8 cut(s)	411, 915, 930, 1297, 1558, 1711, 1743, 1834
EcoT14I	CCWWGG	2 cut(s)	309, 1657
EcoT38I	GRGCYC	2 cut(s)	107, 352
ErhI	CCWWGG	2 cut(s)	309, 1657
FaeI	CATG	1 cut(s)	1276
FalI	AAGNNNNNCTT	2 cut(s)	1208, 1240
FaqI	GGGAC	2 cut(s)	522, 739
FatI	CATG	1 cut(s)	1272
FauI	CCCGC	2 cut(s)	41, 858
FbaI	TGATCA	1 cut(s)	1594
Fnu4HI	GCNGC	6 cut(s)	666, 924, 927, 1011, 1469, 1791
FokI	GGATG	4 cut(s)	857, 914, 1001, 1084
FriOI	GRGCYC	2 cut(s)	107, 352
Fsp4HI	GCNGC	6 cut(s)	666, 924, 927, 1011, 1469, 1791
FspBI	CTAG	5 cut(s)	147, 162, 485, 753, 999
GlaI	GCGC	2 cut(s)	970, 1172
GluI	GCNGC	6 cut(s)	666, 924, 927, 1011, 1469, 1791
HaeII	RGCGCY	1 cut(s)	972
HapII	CCGG	4 cut(s)	204, 449, 1625, 1992
HgaI	GACGC	2 cut(s)	1122, 1860
HhaI	GCGC	2 cut(s)	971, 1173
Hin1II	CATG	1 cut(s)	1276
Hin6I	GCGC	2 cut(s)	969, 1171
HinP1I	GCGC	2 cut(s)	969, 1171
HindIII	AAGCTT	1 cut(s)	1049
HpaII	CCGG	4 cut(s)	204, 449, 1625, 1992
HphI	GGTGA	5 cut(s)	659, 704, 1486, 1684, 1823
Hpy166II	GTNNAC	4 cut(s)	159, 563, 655, 695
Hpy188I	TCNGA	8 cut(s)	73, 90, 514, 825, 1599, 1653, 1876, 2010
Hpy8I	GTNNAC	4 cut(s)	159, 563, 655, 695
Hpy99I	CGWCG	3 cut(s)	52, 94, 1649
HpyCH4III	ACNGT	3 cut(s)	25, 586, 1497
HpyCH4IV	ACGT	1 cut(s)	1261
HpyF10VI	GCNNNNNNNGC	6 cut(s)	481, 599, 1048, 1630, 1897, 2024
HpyF3I	CTNAG	2 cut(s)	1386, 1719
HpySE526I	ACGT	1 cut(s)	1261
Hsp92II	CATG	1 cut(s)	1276
HspAI	GCGC	2 cut(s)	969, 1171
Ksp22I	TGATCA	1 cut(s)	1594
Kzo9I	GATC	7 cut(s)	451, 1099, 1293, 1550, 1594, 1648, 1861
LguI	GCTCTTC	1 cut(s)	112
LmnI	GCTCC	4 cut(s)	124, 325, 1007, 1623
Lsp1109I	GCAGC	6 cut(s)	652, 910, 938, 1022, 1480, 1802
LweI	GCATC	6 cut(s)	892, 1171, 1620, 1690, 1804, 1810
MaeI	CTAG	5 cut(s)	147, 162, 485, 753, 999
MaeII	ACGT	1 cut(s)	1261
MaeIII	GTNAC	6 cut(s)	196, 407, 934, 1312, 1672, 1879
MalI	GATC	7 cut(s)	453, 1101, 1295, 1552, 1596, 1650, 1863
MbiI	CCGCTC	2 cut(s)	1069, 1907
MboI	GATC	7 cut(s)	451, 1099, 1293, 1550, 1594, 1648, 1861
MfeI	CAATTG	2 cut(s)	251, 458
MflI	RGATCY	2 cut(s)	1550, 1861
MhlI	GDGCHC	2 cut(s)	107, 352
MlsI	TGGCCA	2 cut(s)	249, 915
MluNI	TGGCCA	2 cut(s)	249, 915
MlyI	GAGTC	4 cut(s)	450, 1270, 1460, 1669
MmeI	TCCRAC	1 cut(s)	113
Mox20I	TGGCCA	2 cut(s)	249, 915
MscI	TGGCCA	2 cut(s)	249, 915
MseI	TTAA	5 cut(s)	465, 612, 977, 1023, 2030
Msp20I	TGGCCA	2 cut(s)	249, 915
MspCI	CTTAAG	1 cut(s)	611
MspI	CCGG	4 cut(s)	204, 449, 1625, 1992
MspR9I	CCNGG	9 cut(s)	413, 917, 932, 1299, 1560, 1713, 1745, 1836, 1993
MunI	CAATTG	2 cut(s)	251, 458
MvaI	CCWGG	8 cut(s)	413, 917, 932, 1299, 1560, 1713, 1745, 1836
MvnI	CGCG	1 cut(s)	438
MwoI	GCNNNNNNNGC	6 cut(s)	481, 599, 1048, 1630, 1897, 2024
NciI	CCSGG	1 cut(s)	1993
NdeII	GATC	7 cut(s)	451, 1099, 1293, 1550, 1594, 1648, 1861
NlaIII	CATG	1 cut(s)	1276
NlaIV	GGNNCC	5 cut(s)	327, 1270, 1619, 1710, 1863
NmeAIII	GCCGAG	3 cut(s)	115, 1085, 1657
NmuCI	GTSAC	3 cut(s)	407, 934, 1672
PaqCI	CACCTGC	1 cut(s)	1462
PciSI	GCTCTTC	1 cut(s)	112
PcsI	WCGNNNNNNNCGW	1 cut(s)	53
PinAI	ACCGGT	1 cut(s)	203
PkrI	GCNGC	6 cut(s)	667, 925, 928, 1012, 1470, 1792
Ple19I	CGATCG	1 cut(s)	1102
PleI	GAGTC	4 cut(s)	449, 1270, 1459, 1669
PpsI	GAGTC	4 cut(s)	449, 1270, 1459, 1669
Ppu21I	YACGTR	1 cut(s)	1262
PpuMI	RGGWCCY	1 cut(s)	1078
Psp5II	RGGWCCY	1 cut(s)	1078
Psp6I	CCWGG	8 cut(s)	411, 915, 930, 1297, 1558, 1711, 1743, 1834
PspGI	CCWGG	8 cut(s)	411, 915, 930, 1297, 1558, 1711, 1743, 1834
PspN4I	GGNNCC	5 cut(s)	327, 1270, 1619, 1710, 1863
PspPI	GGNCC	3 cut(s)	1078, 1688, 1709
PspPPI	RGGWCCY	1 cut(s)	1078
PstI	CTGCAG	1 cut(s)	928
PstNI	CAGNNNCTG	2 cut(s)	728, 1718
PsuI	RGATCY	2 cut(s)	1550, 1861
PvuI	CGATCG	1 cut(s)	1102
RsaI	GTAC	5 cut(s)	12, 656, 837, 1213, 1629
RsaNI	GTAC	5 cut(s)	11, 655, 836, 1212, 1628
SapI	GCTCTTC	1 cut(s)	112
SaqAI	TTAA	5 cut(s)	465, 612, 977, 1023, 2030
SatI	GCNGC	6 cut(s)	666, 924, 927, 1011, 1469, 1791
Sau3AI	GATC	7 cut(s)	451, 1099, 1293, 1550, 1594, 1648, 1861
Sau96I	GGNCC	3 cut(s)	1078, 1688, 1709
ScaI	AGTACT	1 cut(s)	837
SchI	GAGTC	4 cut(s)	450, 1270, 1460, 1669
ScrFI	CCNGG	9 cut(s)	413, 917, 932, 1299, 1560, 1713, 1745, 1836, 1993
SduI	GDGCHC	2 cut(s)	107, 352
SfaNI	GCATC	6 cut(s)	892, 1171, 1620, 1690, 1804, 1810
SfcI	CTRYAG	1 cut(s)	924
SinI	GGWCC	1 cut(s)	1078
SmlI	CTYRAG	3 cut(s)	611, 1446, 1574
SmoI	CTYRAG	3 cut(s)	611, 1446, 1574
SsiI	CCGC	8 cut(s)	34, 273, 438, 865, 1069, 1545, 1859, 1907
SspI	AATATT	1 cut(s)	319
SspMI	CTAG	5 cut(s)	147, 162, 485, 753, 999
StyD4I	CCNGG	9 cut(s)	411, 915, 930, 1297, 1558, 1711, 1743, 1834, 1991
StyI	CCWWGG	2 cut(s)	309, 1657
TaaI	ACNGT	3 cut(s)	25, 586, 1497
TaiI	ACGT	1 cut(s)	1264
TaqI	TCGA	4 cut(s)	267, 1149, 1330, 1684
TatI	WGTACW	3 cut(s)	654, 835, 1211
Tru1I	TTAA	5 cut(s)	465, 612, 977, 1023, 2030
Tru9I	TTAA	5 cut(s)	465, 612, 977, 1023, 2030
TscAI	CASTG	3 cut(s)	265, 412, 547
TseFI	GTSAC	3 cut(s)	407, 934, 1672
TseI	GCWGC	6 cut(s)	665, 923, 926, 1010, 1468, 1790
Tsp45I	GTSAC	3 cut(s)	407, 934, 1672
TspDTI	ATGAA	4 cut(s)	1532, 1796, 1910, 1968
TspRI	CASTG	3 cut(s)	265, 412, 547
Vha464I	CTTAAG	1 cut(s)	611
VpaK11BI	GGWCC	1 cut(s)	1078
XagI	CCTNNNNNAGG	1 cut(s)	1612
XapI	RAATTY	2 cut(s)	1326, 1799
XbaI	TCTAGA	2 cut(s)	146, 998
XcmI	CCANNNNNNNNNTGG	1 cut(s)	257
XspI	CTAG	5 cut(s)	147, 162, 485, 753, 999
ZrmI	AGTACT	1 cut(s)	837

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.