Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0012110

Physical Location & Seq

Genomic Coordinates Forward (+)

28703911 .. 28708992

Gene Structure 5082 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g36490.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2088 bp

ATGTTCCACAACCTTCTTGTGTTGTGGGGTGTTCTCTTTGGATTCTGCACCGTCTGCGTTTATTCGAAGACCAATACTCAGGATGTCACTGCCCTTAATGTGATGTATAACAGTTTAACCTCTAAATCAAAACTAAGTGATTGGAAATCAAGTGGAGGTGACCCTTGTGGTGATTCTTGGAAAGGGATCAAATGCAAAGGCTCAGCTGTAACTGAAATAAATTTGTCTGACCTTGACCTCAGTGGAACAATGGGGTACCAGCTTGCAAGCTTATCATCTGTCACCTCCTTTGACTTAAGCAACAACAAATTCAGCGGCGATATACCATATCAACTGCCTCCTAACGCAAAATATATAGATCTTTCTAACAATGGCTTCACAAATACCGTACCATATTCAGTATCTCAGATGTCTGACCTTGAAACTCTAAATCTTGGTAATAACAAGCTCAACGGACAGTTGACTGATATGTTCAATAAACTTACTAAACTTAAAAAGCTGGACCTATCGCACAACTCACTGACTGGCAACTTGCCTCAGAGTTTTGCAAAGCTCTCAAGCCTCAAGACATTGTATCTGCAGAACAATCAATTTACTGGGACGATAAATGTCCTCCTGTACACTCCAGTTAATGATTTGAATGTTGAAAACAACAAATTTACTGGTTGGGTCCCTAATGATTTGAAGAGCATAAAAATAAAGTATGGAGGAAATAATTGGTCATCTGGGCCATCTCCACCTTCTCCTCCTGGTGTAAACCATAATAGGGGGTCGGGCAGCAGTAGCAGTGGTGGCGGAAGGAAGTCTTCAGTAACCATGGGATTGACAATAGCTGCGATAGCCTTCGCCGTATTGTTTCTGCTTGGAGTTATAATTTTCTTGTTTTCAAGAAAGAAACGTCCTAATAATTCACATCTCCTTGATGATGATAGACTTGACAGGCACAAATCCTTCTCTATGTTTTCATCTAGGGACTTGACTAAAGACATGCATTCTGATTATGATGGCTTGAAATCTTCTGATCCTGCAGCCGTTATTGACATAAAGCCTGTTCAAAAATCTCCATCATCTGGTTTTAAGTCCATCTCTGGCCGATTGCAATCCTTTGCCAGAAGAAGTACCTCTGTGAAAGCTGTATCGTACGCTTTAGCAGACTTGCAGATTGCGACAGGTAATTTTGCACCAGCTCGCCTTCTTGGACAGGGCACAATTGGACGTGTCTACAAGGCTAAATTTGAGAGTGGGAAGATTTTGGCTGTTAAAAAGATCGACTCCTCATTGTTCCAAGGCACATCACCACAAGACTTTTCTGACATCGTTGTGAGCATTTCCAAGATTCGACATGCCAATGTAGCCGAACTTGTTGGTTATTGTGCAGAACACGGGCACAACATGTTAATTTACGAGTATTTCAGGAATGGCTCACTTAATGAGTTCTTACACCAGTCAGATGACTACAGCAATCCTCTAACTTGGAACACAAGAGTCAAGATTGCTATGGGCACTGCGCGTGCTATTGAGCACCTCCATGAGGTTTGCTCTCCACCCGTAATTCACAAGAACATCAAATCATCCAATATCTTTCTAGACCTTGAACTCAATCCTCGTCTCTCTGATTATGGCTTGGCAACCTTTCATCAGCGCACTAGCCAAAACCTAGGGATGGGATACAATGCACCAGAATGCACGAAGCCATCAGCTTATACAATGAAGAGTGATGTTTACAGCTTTGGGGTAGTGATGTTGGAATTATTGACAGGTGAAAAACCAGTCGACAGTTCAAAACCACCTGCACAGCAGTCCCTTGTCCGATGGGCAACTCCACAGCTCCATGATCTCGACAAATTGTCACAAATGGTCGACCCTGGCCTGCGAGGACTCTACGATCCCAAGTCAGTCTCCCGGTTTGCTGATATCATTGCCCTATGCGTTCAGCTAGAGCCGGAGTTCCGGCCACCTATCTCAGAAGTGGTTCAGCAATTGGTGCGGCTAGTTCAGCGTTCCACCGTGGATTTTTCTCGTCATTCTAGTAACATGAGCAGCTACAGAGAAGATCTCCAATCTTCTCGTCGGCTAACCGACTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

696

Amino Acids

76.63

Weight (kDa)

9.1

Isoelectric Point (pI)

41.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	26 - 65	3e-09	Leucine rich repeat N-terminal domain
LRR_8	PF13855	114 - 174	5.3e-09	Leucine rich repeat
LRR_8	PF13855	156 - 198	5.5e-09	Leucine rich repeat
LRR_4	PF12799	162 - 199	2.7e-06	Leucine Rich repeats (2 copies)
Pkinase	PF00069	396 - 660	1.6e-37	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	397 - 661	8.5e-40	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012110)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78980
fragaria_vesca	FvH4_6g36490
malus_domestica	MD09G1168400.v1.1 MD17G1158200.v1.1 MD17G1158500.v1.1
prunus_persica	Prupe.3G026900_v2.0.a1 Prupe.3G026900_v2.0.a1 Prupe.3G026900_v2.0.a1
pyrus_communis	pycom17g15170
rosa_chinensis	RchiOBHm_Chr2g0148621
rosa_laevigata	RLG00000020356
rosa_multiflora	Rmu_sc0000048.1_g000025
rosa_roxburghii	Rroxscaffold_2G00098590
rosa_rugosa	Rorug02G0408200
rosa_samantha	Rh2AG466600 Rh2BG479700 Rh2CG453100 Rh2DG488500
rosa_wichuraiana	Rw2G038050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	872
AarI	CACCTGC	1 cut(s)	1798
Acc36I	ACCTGC	1 cut(s)	1798
Acc65I	GGTACC	1 cut(s)	255
AccB1I	GGYRCC	1 cut(s)	255
AccB7I	CCANNNNNTGG	1 cut(s)	1070
AccI	GTMKAC	3 cut(s)	1221, 1773, 1860
AccII	CGCG	1 cut(s)	1510
AciI	CCGC	3 cut(s)	315, 795, 1987
AclWI	GGATC	3 cut(s)	194, 1016, 1880
AcoI	YGGCCR	2 cut(s)	1090, 1952
AcsI	RAATTY	4 cut(s)	220, 308, 656, 1232
AcuI	CTGAAG	1 cut(s)	792
AfaI	GTAC	5 cut(s)	257, 390, 620, 1120, 1142
AfiI	CCNNNNNNNGG	4 cut(s)	766, 1070, 1531, 1663
AflII	CTTAAG	1 cut(s)	295
AflIII	ACRYGT	2 cut(s)	1216, 1392
AhdI	GACNNNNNGTC	1 cut(s)	1846
AjiI	CACGTC	1 cut(s)	1217
AjnI	CCWGG	2 cut(s)	748, 1864
Alw21I	GWGCWC	1 cut(s)	1524
Alw26I	GTCTC	2 cut(s)	1613, 1903
AlwI	GGATC	3 cut(s)	194, 1016, 1880
AoxI	GGCC	4 cut(s)	728, 1090, 1867, 1952
ApeKI	GCWGC	4 cut(s)	777, 833, 1028, 2040
ApoI	RAATTY	4 cut(s)	220, 308, 656, 1232
Asp700I	GAANNNNTTC	1 cut(s)	1971
Asp718I	GGTACC	1 cut(s)	255
AspA2I	CCTAGG	1 cut(s)	1657
AspLEI	GCGC	2 cut(s)	1510, 1644
AspS9I	GGNCC	3 cut(s)	502, 670, 728
AsuC2I	CCSGG	1 cut(s)	1903
AsuHPI	GGTGA	5 cut(s)	170, 182, 274, 1287, 1772
AsuII	TTCGAA	1 cut(s)	65
AvaII	GGWCC	2 cut(s)	502, 670
AvrII	CCTAGG	1 cut(s)	1657
BaeGI	GKGCMC	3 cut(s)	1208, 1389, 1505
BanI	GGYRCC	1 cut(s)	255
BbsI	GAAGAC	2 cut(s)	74, 798
Bbv12I	GWGCWC	1 cut(s)	1524
BbvI	GCAGC	4 cut(s)	789, 820, 1040, 2052
BccI	CCATC	7 cut(s)	739, 998, 1072, 1091, 1657, 1702, 1806
BceAI	ACGGC	2 cut(s)	833, 1016
BciT130I	CCWGG	2 cut(s)	750, 1866
BciVI	GTATCC	1 cut(s)	1661
BcnI	CCSGG	1 cut(s)	1903
BcoDI	GTCTC	2 cut(s)	1613, 1903
BfaI	CTAG	7 cut(s)	969, 1586, 1647, 1658, 1937, 1991, 2028
BfmI	CTRYAG	4 cut(s)	578, 1026, 1456, 2044
BfrI	CTTAAG	1 cut(s)	295
BfuAI	ACCTGC	1 cut(s)	1798
BfuI	GTATCC	1 cut(s)	1661
BglII	AGATCT	2 cut(s)	358, 2053
BisI	GCNGC	6 cut(s)	316, 778, 834, 1029, 1988, 2041
BlnI	CCTAGG	1 cut(s)	1657
BlpI	GCTNAGC	1 cut(s)	202
BlsI	GCNGC	6 cut(s)	317, 779, 835, 1030, 1989, 2042
Bme1390I	CCNGG	3 cut(s)	750, 1866, 1903
Bme18I	GGWCC	2 cut(s)	502, 670
BmeRI	GACNNNNNGTC	1 cut(s)	1846
BmgBI	CACGTC	1 cut(s)	1217
BmgT120I	GGNCC	3 cut(s)	502, 670, 728
BmiI	GGNNCC	3 cut(s)	257, 671, 672
BmrFI	CCNGG	3 cut(s)	750, 1866, 1903
BmrI	ACTGGG	1 cut(s)	606
BmuI	ACTGGG	1 cut(s)	606
BpiI	GAAGAC	2 cut(s)	74, 798
BplI	GAGNNNNNCTC	4 cut(s)	1523, 1555, 2040, 2072
BpmI	CTGGAG	1 cut(s)	609
Bpu1102I	GCTNAGC	1 cut(s)	202
Bpu14I	TTCGAA	1 cut(s)	65
BpuEI	CTTGAG	2 cut(s)	541, 548
BpuMI	CCSGG	1 cut(s)	1903
BsaBI	GATNNNNATC	1 cut(s)	1099
BsaJI	CCNNGG	5 cut(s)	816, 1285, 1657, 1864, 2007
Bsc4I	CCNNNNNNNGG	4 cut(s)	766, 1070, 1531, 1663
Bse1I	ACTGG	6 cut(s)	529, 601, 626, 667, 1444, 1769
Bse3DI	GCAATG	1 cut(s)	1917
Bse8I	GATNNNNATC	1 cut(s)	1099
BseBI	CCWGG	2 cut(s)	750, 1866
BseDI	CCNNGG	5 cut(s)	816, 1285, 1657, 1864, 2007
BseGI	GGATG	3 cut(s)	88, 1571, 1668
BseJI	GATNNNNATC	1 cut(s)	1099
BseLI	CCNNNNNNNGG	4 cut(s)	766, 1070, 1531, 1663
BseMI	GCAATG	1 cut(s)	1917
BseMII	CTCAG	6 cut(s)	92, 216, 253, 419, 551, 1977
BseNI	ACTGG	6 cut(s)	529, 601, 626, 667, 1444, 1769
BseRI	GAGGAG	2 cut(s)	735, 1264
BseSI	GKGCMC	3 cut(s)	1208, 1389, 1505
BseXI	GCAGC	4 cut(s)	789, 820, 1040, 2052
BsgI	GTGCAG	3 cut(s)	31, 1395, 1776
Bsh1236I	CGCG	1 cut(s)	1510
BshFI	GGCC	4 cut(s)	730, 1092, 1869, 1954
BshNI	GGYRCC	1 cut(s)	255
BsiHKAI	GWGCWC	1 cut(s)	1524
BsiSI	CCGG	3 cut(s)	1903, 1943, 1951
BsiWI	CGTACG	1 cut(s)	1140
BslFI	GGGAC	4 cut(s)	613, 656, 986, 1786
BslI	CCNNNNNNNGG	4 cut(s)	766, 1070, 1531, 1663
BsmAI	GTCTC	2 cut(s)	1613, 1903
BsmBI	CGTCTC	1 cut(s)	1613
BsmFI	GGGAC	4 cut(s)	613, 656, 986, 1786
BsmI	GAATGC	2 cut(s)	991, 1688
BsnI	GGCC	4 cut(s)	730, 1092, 1869, 1954
Bsp119I	TTCGAA	1 cut(s)	65
Bsp1286I	GDGCHC	4 cut(s)	1208, 1389, 1505, 1524
Bsp1407I	TGTACA	1 cut(s)	618
Bsp143I	GATC	7 cut(s)	186, 358, 1021, 1266, 1834, 1885, 2053
Bsp1720I	GCTNAGC	1 cut(s)	202
Bsp19I	CCATGG	1 cut(s)	816
BspACI	CCGC	3 cut(s)	315, 795, 1987
BspANI	GGCC	4 cut(s)	730, 1092, 1869, 1954
BspCNI	CTCAG	6 cut(s)	91, 215, 252, 418, 550, 1976
BspFNI	CGCG	1 cut(s)	1510
BspLI	GGNNCC	3 cut(s)	257, 671, 672
BspMAI	CTGCAG	2 cut(s)	582, 1030
BspMI	ACCTGC	1 cut(s)	1798
BspPI	GGATC	3 cut(s)	194, 1016, 1880
BspQI	GCTCTTC	1 cut(s)	680
BspT104I	TTCGAA	1 cut(s)	65
BspT107I	GGYRCC	1 cut(s)	255
BspTI	CTTAAG	1 cut(s)	295
BsrDI	GCAATG	1 cut(s)	1917
BsrGI	TGTACA	1 cut(s)	618
BsrI	ACTGG	6 cut(s)	529, 601, 626, 667, 1444, 1769
BssECI	CCNNGG	5 cut(s)	816, 1285, 1657, 1864, 2007
BssMI	GATC	7 cut(s)	186, 358, 1021, 1266, 1834, 1885, 2053
BssT1I	CCWWGG	3 cut(s)	816, 1285, 1657
Bst2UI	CCWGG	2 cut(s)	750, 1866
Bst4CI	ACNGT	6 cut(s)	52, 113, 388, 459, 1778, 2008
Bst6I	CTCTTC	2 cut(s)	680, 1706
BstAFI	CTTAAG	1 cut(s)	295
BstAPI	GCANNNNNTGC	2 cut(s)	54, 1984
BstAUI	TGTACA	1 cut(s)	618
BstBI	TTCGAA	1 cut(s)	65
BstC8I	GCNNGC	5 cut(s)	264, 268, 1189, 1512, 1871
BstDEI	CTNAG	7 cut(s)	78, 134, 202, 239, 405, 537, 1963
BstDSI	CCRYGG	2 cut(s)	816, 2007
BstEII	GGTNACC	1 cut(s)	158
BstENI	CCTNNNNNAGG	1 cut(s)	1529
BstF5I	GGATG	3 cut(s)	88, 1571, 1668
BstFNI	CGCG	1 cut(s)	1510
BstHHI	GCGC	2 cut(s)	1510, 1644
BstKTI	GATC	7 cut(s)	189, 361, 1024, 1269, 1837, 1888, 2056
BstMAI	GTCTC	2 cut(s)	1613, 1903
BstMBI	GATC	7 cut(s)	186, 358, 1021, 1266, 1834, 1885, 2053
BstMWI	GCNNNNNNNGC	7 cut(s)	54, 783, 792, 839, 1352, 1984, 1996
BstNI	CCWGG	2 cut(s)	750, 1866
BstNSI	RCATGY	3 cut(s)	991, 1346, 1396
BstPI	GGTNACC	1 cut(s)	158
BstSCI	CCNGG	3 cut(s)	748, 1864, 1901
BstSFI	CTRYAG	4 cut(s)	578, 1026, 1456, 2044
BstSLI	GKGCMC	3 cut(s)	1208, 1389, 1505
BstUI	CGCG	1 cut(s)	1510
BstV1I	GCAGC	4 cut(s)	789, 820, 1040, 2052
BstV2I	GAAGAC	2 cut(s)	74, 798
BstX2I	RGATCY	2 cut(s)	358, 2053
BstYI	RGATCY	2 cut(s)	358, 2053
BsuI	GTATCC	1 cut(s)	1661
BsuRI	GGCC	4 cut(s)	730, 1092, 1869, 1954
BtgI	CCRYGG	2 cut(s)	816, 2007
BtrI	CACGTC	1 cut(s)	1217
BtsCI	GGATG	3 cut(s)	88, 1571, 1668
BtsI	GCAGTG	3 cut(s)	87, 793, 1503
BtsIMutI	CAGTG	5 cut(s)	87, 247, 518, 793, 1503
BveI	ACCTGC	1 cut(s)	1798
Cac8I	GCNNGC	5 cut(s)	264, 268, 1189, 1512, 1871
CfoI	GCGC	2 cut(s)	1510, 1644
Cfr13I	GGNCC	3 cut(s)	502, 670, 728
Csp6I	GTAC	5 cut(s)	256, 389, 619, 1119, 1141
CviAII	CATG	7 cut(s)	817, 988, 1343, 1393, 1529, 1832, 2035
CviQI	GTAC	5 cut(s)	256, 389, 619, 1119, 1141
DdeI	CTNAG	7 cut(s)	78, 134, 202, 239, 405, 537, 1963
DpnI	GATC	7 cut(s)	188, 360, 1023, 1268, 1836, 1887, 2055
DpnII	GATC	7 cut(s)	186, 358, 1021, 1266, 1834, 1885, 2053
DriI	GACNNNNNGTC	1 cut(s)	1846
EaeI	YGGCCR	2 cut(s)	1090, 1952
Eam1104I	CTCTTC	2 cut(s)	680, 1706
Eam1105I	GACNNNNNGTC	1 cut(s)	1846
EarI	CTCTTC	2 cut(s)	680, 1706
EciI	GGCGGA	1 cut(s)	810
Eco130I	CCWWGG	3 cut(s)	816, 1285, 1657
Eco32I	GATATC	1 cut(s)	1915
Eco47I	GGWCC	2 cut(s)	502, 670
Eco57I	CTGAAG	1 cut(s)	792
Eco91I	GGTNACC	1 cut(s)	158
EcoNI	CCTNNNNNAGG	1 cut(s)	1529
EcoO109I	RGGNCCY	1 cut(s)	670
EcoO65I	GGTNACC	1 cut(s)	158
EcoRII	CCWGG	2 cut(s)	748, 1864
EcoRV	GATATC	1 cut(s)	1915
EcoT14I	CCWWGG	3 cut(s)	816, 1285, 1657
EcoT22I	ATGCAT	1 cut(s)	993
ErhI	CCWWGG	3 cut(s)	816, 1285, 1657
Esp3I	CGTCTC	1 cut(s)	1613
FaeI	CATG	7 cut(s)	820, 991, 1346, 1396, 1532, 1835, 2038
FalI	AAGNNNNNCTT	2 cut(s)	790, 822
FaqI	GGGAC	4 cut(s)	613, 656, 986, 1786
FatI	CATG	7 cut(s)	816, 987, 1342, 1392, 1528, 1831, 2034
FblI	GTMKAC	3 cut(s)	1221, 1773, 1860
Fnu4HI	GCNGC	6 cut(s)	316, 778, 834, 1029, 1988, 2041
FokI	GGATG	3 cut(s)	95, 1558, 1675
Fsp4HI	GCNGC	6 cut(s)	316, 778, 834, 1029, 1988, 2041
FspBI	CTAG	7 cut(s)	969, 1586, 1647, 1658, 1937, 1991, 2028
GlaI	GCGC	2 cut(s)	1509, 1643
GluI	GCNGC	6 cut(s)	316, 778, 834, 1029, 1988, 2041
GsuI	CTGGAG	1 cut(s)	609
HaeIII	GGCC	4 cut(s)	730, 1092, 1869, 1954
HapII	CCGG	3 cut(s)	1903, 1943, 1951
HhaI	GCGC	2 cut(s)	1510, 1644
Hin1II	CATG	7 cut(s)	820, 991, 1346, 1396, 1532, 1835, 2038
Hin6I	GCGC	2 cut(s)	1508, 1642
HinP1I	GCGC	2 cut(s)	1508, 1642
HincII	GTYRAC	3 cut(s)	462, 1774, 1861
HindII	GTYRAC	3 cut(s)	462, 1774, 1861
HindIII	AAGCTT	1 cut(s)	268
HinfI	GANTC	6 cut(s)	42, 173, 1271, 1336, 1485, 1878
HpaII	CCGG	3 cut(s)	1903, 1943, 1951
HphI	GGTGA	5 cut(s)	170, 182, 274, 1287, 1772
Hpy166II	GTNNAC	7 cut(s)	462, 621, 757, 1222, 1723, 1774, 1861
Hpy188III	TCNNGA	7 cut(s)	80, 565, 888, 1414, 1489, 1586, 1838
Hpy8I	GTNNAC	7 cut(s)	462, 621, 757, 1222, 1723, 1774, 1861
Hpy99I	CGWCG	1 cut(s)	2073
HpyAV	CCTTC	6 cut(s)	23, 750, 792, 853, 961, 1202
HpyCH4III	ACNGT	6 cut(s)	52, 113, 388, 459, 1778, 2008
HpyCH4IV	ACGT	2 cut(s)	898, 1216
HpyF10VI	GCNNNNNNNGC	7 cut(s)	54, 783, 792, 839, 1352, 1984, 1996
HpyF3I	CTNAG	7 cut(s)	78, 134, 202, 239, 405, 537, 1963
HpySE526I	ACGT	2 cut(s)	898, 1216
Hsp92II	CATG	7 cut(s)	820, 991, 1346, 1396, 1532, 1835, 2038
HspAI	GCGC	2 cut(s)	1508, 1642
KflI	GGGWCCC	1 cut(s)	670
KpnI	GGTACC	1 cut(s)	259
Kzo9I	GATC	7 cut(s)	186, 358, 1021, 1266, 1834, 1885, 2053
LguI	GCTCTTC	1 cut(s)	680
LmnI	GCTCC	1 cut(s)	1833
Lsp1109I	GCAGC	4 cut(s)	789, 820, 1040, 2052
MaeI	CTAG	7 cut(s)	969, 1586, 1647, 1658, 1937, 1991, 2028
MaeII	ACGT	2 cut(s)	898, 1216
MaeIII	GTNAC	7 cut(s)	85, 158, 208, 280, 811, 1848, 2030
MalI	GATC	7 cut(s)	188, 360, 1023, 1268, 1836, 1887, 2055
MboI	GATC	7 cut(s)	186, 358, 1021, 1266, 1834, 1885, 2053
MboII	GAAGA	9 cut(s)	79, 697, 798, 1008, 1125, 1258, 1723, 2055, 2063
MfeI	CAATTG	2 cut(s)	1209, 1979
MflI	RGATCY	2 cut(s)	358, 2053
MhlI	GDGCHC	4 cut(s)	1208, 1389, 1505, 1524
MlyI	GAGTC	3 cut(s)	1265, 1494, 1872
MmeI	TCCRAC	1 cut(s)	1725
Mph1103I	ATGCAT	1 cut(s)	993
MroXI	GAANNNNTTC	1 cut(s)	1971
MseI	TTAA	9 cut(s)	96, 116, 296, 492, 630, 1077, 1260, 1397, 1428
MslI	CAYNNNNRTG	4 cut(s)	1319, 1347, 1527, 1681
MspA1I	CMGCKG	2 cut(s)	206, 315
MspCI	CTTAAG	1 cut(s)	295
MspI	CCGG	3 cut(s)	1903, 1943, 1951
MspR9I	CCNGG	3 cut(s)	750, 1866, 1903
MunI	CAATTG	2 cut(s)	1209, 1979
Mva1269I	GAATGC	2 cut(s)	991, 1688
MvaI	CCWGG	2 cut(s)	750, 1866
MvnI	CGCG	1 cut(s)	1510
MwoI	GCNNNNNNNGC	7 cut(s)	54, 783, 792, 839, 1352, 1984, 1996
NciI	CCSGG	1 cut(s)	1903
NcoI	CCATGG	1 cut(s)	816
NdeII	GATC	7 cut(s)	186, 358, 1021, 1266, 1834, 1885, 2053
NlaIII	CATG	7 cut(s)	820, 991, 1346, 1396, 1532, 1835, 2038
NlaIV	GGNNCC	3 cut(s)	257, 671, 672
NmuCI	GTSAC	4 cut(s)	85, 158, 280, 1848
NsiI	ATGCAT	1 cut(s)	993
NspI	RCATGY	3 cut(s)	991, 1346, 1396
NspV	TTCGAA	1 cut(s)	65
PaqCI	CACCTGC	1 cut(s)	1798
PciI	ACATGT	1 cut(s)	1392
PciSI	GCTCTTC	1 cut(s)	680
PctI	GAATGC	2 cut(s)	991, 1688
PdmI	GAANNNNTTC	1 cut(s)	1971
PfeI	GAWTC	3 cut(s)	42, 173, 1336
Pfl23II	CGTACG	1 cut(s)	1140
PflMI	CCANNNNNTGG	1 cut(s)	1070
PkrI	GCNGC	6 cut(s)	317, 779, 835, 1030, 1989, 2042
PleI	GAGTC	3 cut(s)	1265, 1493, 1872
PpsI	GAGTC	3 cut(s)	1265, 1493, 1872
PpuMI	RGGWCCY	1 cut(s)	670
PscI	ACATGT	1 cut(s)	1392
PsiI	TTATAA	1 cut(s)	872
Psp5II	RGGWCCY	1 cut(s)	670
Psp6I	CCWGG	2 cut(s)	748, 1864
PspEI	GGTNACC	1 cut(s)	158
PspGI	CCWGG	2 cut(s)	748, 1864
PspLI	CGTACG	1 cut(s)	1140
PspN4I	GGNNCC	3 cut(s)	257, 671, 672
PspPI	GGNCC	3 cut(s)	502, 670, 728
PspPPI	RGGWCCY	1 cut(s)	670
PstI	CTGCAG	2 cut(s)	582, 1030
PsuI	RGATCY	2 cut(s)	358, 2053
PvuII	CAGCTG	1 cut(s)	206
RsaI	GTAC	5 cut(s)	257, 390, 620, 1120, 1142
RsaNI	GTAC	5 cut(s)	256, 389, 619, 1119, 1141
RseI	CAYNNNNRTG	4 cut(s)	1319, 1347, 1527, 1681
SalI	GTCGAC	2 cut(s)	1772, 1859
SapI	GCTCTTC	1 cut(s)	680
SaqAI	TTAA	9 cut(s)	96, 116, 296, 492, 630, 1077, 1260, 1397, 1428
SatI	GCNGC	6 cut(s)	316, 778, 834, 1029, 1988, 2041
Sau3AI	GATC	7 cut(s)	186, 358, 1021, 1266, 1834, 1885, 2053
Sau96I	GGNCC	3 cut(s)	502, 670, 728
SchI	GAGTC	3 cut(s)	1265, 1494, 1872
ScrFI	CCNGG	3 cut(s)	750, 1866, 1903
SduI	GDGCHC	4 cut(s)	1208, 1389, 1505, 1524
SfcI	CTRYAG	4 cut(s)	578, 1026, 1456, 2044
SfuI	TTCGAA	1 cut(s)	65
SinI	GGWCC	2 cut(s)	502, 670
SmiMI	CAYNNNNRTG	4 cut(s)	1319, 1347, 1527, 1681
SmlI	CTYRAG	3 cut(s)	295, 556, 563
SmoI	CTYRAG	3 cut(s)	295, 556, 563
SsiI	CCGC	3 cut(s)	315, 795, 1987
SspMI	CTAG	7 cut(s)	969, 1586, 1647, 1658, 1937, 1991, 2028
StyD4I	CCNGG	3 cut(s)	748, 1864, 1901
StyI	CCWWGG	3 cut(s)	816, 1285, 1657
TaaI	ACNGT	6 cut(s)	52, 113, 388, 459, 1778, 2008
TaiI	ACGT	2 cut(s)	901, 1219
TaqI	TCGA	6 cut(s)	65, 1269, 1339, 1773, 1839, 1860
TatI	WGTACW	1 cut(s)	618
TauI	GCSGC	2 cut(s)	318, 1990
TfiI	GAWTC	3 cut(s)	42, 173, 1336
Tru1I	TTAA	9 cut(s)	96, 116, 296, 492, 630, 1077, 1260, 1397, 1428
Tru9I	TTAA	9 cut(s)	96, 116, 296, 492, 630, 1077, 1260, 1397, 1428
TscAI	CASTG	5 cut(s)	94, 247, 525, 793, 1510
TseFI	GTSAC	4 cut(s)	85, 158, 280, 1848
TseI	GCWGC	4 cut(s)	777, 833, 1028, 2040
Tsp45I	GTSAC	4 cut(s)	85, 158, 280, 1848
TspDTI	ATGAA	3 cut(s)	954, 1625, 1724
TspGWI	ACGGA	1 cut(s)	468
TspRI	CASTG	5 cut(s)	94, 247, 525, 793, 1510
Van91I	CCANNNNNTGG	1 cut(s)	1070
Vha464I	CTTAAG	1 cut(s)	295
VpaK11BI	GGWCC	2 cut(s)	502, 670
XagI	CCTNNNNNAGG	1 cut(s)	1529
XapI	RAATTY	4 cut(s)	220, 308, 656, 1232
XbaI	TCTAGA	1 cut(s)	1585
XceI	RCATGY	3 cut(s)	991, 1346, 1396
XmaJI	CCTAGG	1 cut(s)	1657
XmiI	GTMKAC	3 cut(s)	1221, 1773, 1860
XmnI	GAANNNNTTC	1 cut(s)	1971
XspI	CTAG	7 cut(s)	969, 1586, 1647, 1658, 1937, 1991, 2028
Zsp2I	ATGCAT	1 cut(s)	993

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.