Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0012110

Physical Location & Seq

Genomic Coordinates Reverse (-)

13952716 .. 13957670

Gene Structure 4955 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1168400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2094 bp

ATGATCCACTTCCACAACATTCTGGTGTTGTGGGTTGTTTTATTAGGGTTCTTTGCAACCGGTGTTTATTCCAAGACCAATTCTCAAGATGTATCTGCCCTTAATGTGATGTATAACAGCTTTCAATCTCGTTCTAAACTAAAAGGTTGGAAATCAAGTGGCGGTGACCCTTGCGGCGAGTCATGGAAAGGGATAACATGCTCAGGCTCATCTGTAACCGAAATAGACTTGGCTGACCTAGGGCTCAGCGGATCAATGGGATACCAGCTTGCAAGCTTAACATCTGTCACTAGATTTGATTTAAGCAAGAACAACCTCAACGGTGATATACCCTATCAACTGCCTCCTAGTGCAAAGTACATAGATCTTTCTCAAAATGGTTTTTCGAACACAGTACCATATTCAGTGTCTCAGATGTCTGGCCTTGAAACTCTAAATCTTGGTCGTAACAAGCTTAACGGACAGTTGAGTGATATGTTTGGCAAACTTACGAAACTCAAAGAGTTGGATCTATCTTACAACTCAATAACTGGCAACTTGCCTCAGAGTTTTGGAAAGCTTTCAAGCCTCAAAAAATTATATCTGCAGAACAATCAACTTACCGGTCAAATCAATGTGCTTGTGTACACTCCCGTTGAGGAATTGAATATCGAAAACAACCACTTTTCTGGCTGGATCCCCAACGATTTGAAGGGTATAAACATAAAGTCCGGAGGAAACTCCTGGTCTTCTGGACCATCTCCGCCTTCTCCTCCTGGTGCACACCGCAATAGAGGGTCAGGCAAAAAGAGTGGCAGCAGCAACTCTTCTGTAGTCACTGGAGTAACCATAGCTGGGATAGCTCTTGGCGTATTGTTGCTGCTTGCAATTATAATTGCGCTGTTTTCAAGAAGAAAACGTTCTTCTTCGCATCTCCTCGATGATGACAGGCTTAGCCAGCGCAAGTCGTTTCGCACCTATTCATCTAAGGATTTATCTAAAGAATTGACTTCTGACTACAAGGATTCTGCAGCCGTTTCAATTGACATAAAGCCTGTTTCAAAATCTCCATCAATTGGTTTCATGTCACTGTCTGGCCGTTTGCAATCCTTTGCCAGAAGAAGCACCTCTGTAAAAGCTACCGCTTACGCTTTGGCAGATTTGCAGGTTGCTACTGCTAACTTTTCACCAGCTCGCCTTCTCGGGCAGGGCTCCATTGGACGTGTCTACAGGGCTAAGTATGATGATGGGAAGGTTTTAGCCGTTAAAAAGATTGATTCCTCACTTTTTCAAGGCTCACCACCGCAAGAATTTTCTAACATTGTCGTAAACATCTCCAAGATTCGTCATGCCAACATCGCCGAACTTGTTGGCTATTGTTCAGAACACGGTCACAACATGTTGATTTATGAGTACTTCAGGAATGGCTCGCTTCACAAATTCTTACACATGTCGGATGACTACAGTAATCCCCTAACTTGGAACACAAGAGTCAGAATCGCTTTAGGCACTGCCCGGGCTGTTGAGTACCTCCATGATGGTTGCTCTCCATTCACAGTTCACAAGAACATCAAATCATCCAATATTTTGCTTGACATTGAACTCAATCCCCGTCTTTGCGATCATGGCTTGGCAACATTTCACCAGCGTACTAGCCAAAACCTTGGGATGGGATACAATGCTCCAGAATGCATAAAGCCATCAGCATATACGGCAAAGAGTGATGTTTACAGTTTTGGTGTAGTCATGTTAGAACTATTGACAGGTCGAATGCCTGTTGACAGTTCAAAACGACCAGCGGAGCAGTGCCTTGTGCGTTGGGCAACTCCCCAGCTTCATGATCTCGATGCACTGTCACAAATGGTTGACCCTGCACTGCGTGGACTCTACCCTCCCAAGTCAGTCTCGCGGTTTGCTGATATCGTTGCAATCTGTGTTCAGCGGGAGCCAGAATTTCGGCCACCAATGTCAGAGGTGGTGCAACAGTTGGTGCGGTTAGTGCAGAGCTCTACTGCGAACATGAGGGAGGATTTTGGTATCGGGTCTCGTAACTCTAGTGCCATGAGCAGCAAGAGAGAAGATCTTGCAGCTTCTCGTCGCTTGACTGACTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

698

Amino Acids

76.4

Weight (kDa)

9.39

Isoelectric Point (pI)

49.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	28 - 68	7.5e-10	Leucine rich repeat N-terminal domain
LRR_LRWD1	PF23211	143 - 223	9.8e-07	Leucine-rich repeat and WD repeat-containing protein 1, LRR
LRR_8	PF13855	158 - 200	2.3e-09	Leucine rich repeat
LRR_4	PF12799	164 - 201	4.4e-07	Leucine Rich repeats (2 copies)
Pkinase	PF00069	391 - 655	4e-38	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	392 - 656	7.2e-41	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012110)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78980
fragaria_vesca	FvH4_6g36490
malus_domestica	MD09G1168400.v1.1 MD17G1158200.v1.1 MD17G1158500.v1.1
prunus_persica	Prupe.3G026900_v2.0.a1 Prupe.3G026900_v2.0.a1 Prupe.3G026900_v2.0.a1
pyrus_communis	pycom17g15170
rosa_chinensis	RchiOBHm_Chr2g0148621
rosa_laevigata	RLG00000020356
rosa_multiflora	Rmu_sc0000048.1_g000025
rosa_roxburghii	Rroxscaffold_2G00098590
rosa_rugosa	Rorug02G0408200
rosa_samantha	Rh2AG466600 Rh2BG479700 Rh2CG453100 Rh2DG488500
rosa_wichuraiana	Rw2G038050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	872
Acc36I	ACCTGC	1 cut(s)	1135
AccB7I	CCANNNNNTGG	1 cut(s)	1055
AccI	GTMKAC	1 cut(s)	1206
AccII	CGCG	1 cut(s)	1888
AccIII	TCCGGA	1 cut(s)	710
AclI	AACGTT	1 cut(s)	898
AclWI	GGATC	4 cut(s)	259, 516, 670, 683
AcoI	YGGCCR	2 cut(s)	1075, 1937
AcsI	RAATTY	3 cut(s)	1289, 1418, 1931
AcuI	CTGAAG	1 cut(s)	1381
AdeI	CACNNNGTG	1 cut(s)	1859
AfaI	GTAC	6 cut(s)	359, 396, 626, 1394, 1508, 1630
AfiI	CCNNNNNNNGG	4 cut(s)	834, 1055, 1458, 1648
AflIII	ACRYGT	3 cut(s)	1201, 1377, 1428
AgeI	ACCGGT	2 cut(s)	59, 602
AjiI	CACGTC	1 cut(s)	1202
AjnI	CCWGG	2 cut(s)	722, 754
Alw21I	GWGCWC	2 cut(s)	763, 1988
Alw26I	GTCTC	3 cut(s)	414, 1888, 2028
Alw44I	GTGCAC	1 cut(s)	759
AlwI	GGATC	4 cut(s)	259, 516, 670, 683
Ama87I	CYCGRG	2 cut(s)	1181, 1494
Aor13HI	TCCGGA	1 cut(s)	710
AoxI	GGCC	3 cut(s)	421, 1075, 1937
ApaLI	GTGCAC	1 cut(s)	759
ApeKI	GCWGC	6 cut(s)	795, 798, 859, 1010, 2046, 2066
ApoI	RAATTY	3 cut(s)	1289, 1418, 1931
AsiGI	ACCGGT	2 cut(s)	59, 602
Asp700I	GAANNNNTTC	2 cut(s)	559, 898
AspA2I	CCTAGG	1 cut(s)	238
AspLEI	GCGC	2 cut(s)	880, 942
AspS9I	GGNCC	1 cut(s)	734
AsuC2I	CCSGG	2 cut(s)	1495, 1496
AsuHPI	GGTGA	5 cut(s)	176, 335, 1158, 1269, 1613
AsuII	TTCGAA	1 cut(s)	386
AvaI	CYCGRG	2 cut(s)	1181, 1494
AvaII	GGWCC	1 cut(s)	734
AvrII	CCTAGG	1 cut(s)	238
BaeGI	GKGCMC	1 cut(s)	763
BamHI	GGATCC	1 cut(s)	675
BanII	GRGCYC	3 cut(s)	246, 1193, 1988
BbsI	GAAGAC	1 cut(s)	720
Bbv12I	GWGCWC	2 cut(s)	763, 1988
BbvI	GCAGC	6 cut(s)	807, 810, 846, 1022, 2058, 2078
BccI	CCATC	6 cut(s)	745, 1057, 1220, 1511, 1642, 1687
BceAI	ACGGC	4 cut(s)	998, 1062, 1226, 1707
BciT130I	CCWGG	2 cut(s)	724, 756
BciVI	GTATCC	2 cut(s)	254, 1646
BcnI	CCSGG	2 cut(s)	1495, 1496
BcoDI	GTCTC	3 cut(s)	414, 1888, 2028
BfaI	CTAG	5 cut(s)	239, 291, 348, 1632, 2034
BfmI	CTRYAG	5 cut(s)	584, 810, 1008, 1207, 1441
BfuAI	ACCTGC	1 cut(s)	1135
BfuI	GTATCC	2 cut(s)	254, 1646
BglII	AGATCT	2 cut(s)	364, 2059
BisI	GCNGC	7 cut(s)	175, 796, 799, 860, 1011, 2047, 2067
BlnI	CCTAGG	1 cut(s)	238
BlpI	GCTNAGC	2 cut(s)	245, 932
BlsI	GCNGC	7 cut(s)	176, 797, 800, 861, 1012, 2048, 2068
BmcAI	AGTACT	1 cut(s)	1394
Bme1390I	CCNGG	4 cut(s)	724, 756, 1495, 1496
Bme18I	GGWCC	1 cut(s)	734
BmeT110I	CYCGRG	2 cut(s)	1181, 1494
BmgBI	CACGTC	1 cut(s)	1202
BmgT120I	GGNCC	1 cut(s)	734
BmiI	GGNNCC	3 cut(s)	677, 1192, 1926
BmrFI	CCNGG	4 cut(s)	724, 756, 1495, 1496
BmsI	GCATC	2 cut(s)	919, 1816
BpiI	GAAGAC	1 cut(s)	720
BpmI	CTGGAG	2 cut(s)	840, 1647
Bpu10I	CCTNAGC	1 cut(s)	202
Bpu1102I	GCTNAGC	2 cut(s)	245, 932
Bpu14I	TTCGAA	1 cut(s)	386
BpuEI	CTTGAG	1 cut(s)	69
BpuMI	CCSGG	2 cut(s)	1495, 1496
BsaI	GGTCTC	1 cut(s)	2028
BsaJI	CCNNGG	3 cut(s)	238, 1494, 1642
BsaWI	WCCGGW	3 cut(s)	59, 602, 710
Bsc4I	CCNNNNNNNGG	4 cut(s)	834, 1055, 1458, 1648
Bse118I	RCCGGY	2 cut(s)	59, 602
Bse1I	ACTGG	2 cut(s)	535, 823
BseAI	TCCGGA	1 cut(s)	710
BseBI	CCWGG	2 cut(s)	724, 756
BseDI	CCNNGG	3 cut(s)	238, 1494, 1642
BseGI	GGATG	3 cut(s)	1441, 1556, 1653
BseLI	CCNNNNNNNGG	4 cut(s)	834, 1055, 1458, 1648
BseMII	CTCAG	4 cut(s)	216, 259, 425, 557
BseNI	ACTGG	2 cut(s)	535, 823
BseRI	GAGGAG	2 cut(s)	741, 905
BseSI	GKGCMC	1 cut(s)	763
BseXI	GCAGC	6 cut(s)	807, 810, 846, 1022, 2058, 2078
BseYI	CCCAGC	2 cut(s)	833, 1809
BsgI	GTGCAG	2 cut(s)	1836, 2000
Bsh1236I	CGCG	1 cut(s)	1888
BshFI	GGCC	3 cut(s)	423, 1077, 1939
BshTI	ACCGGT	2 cut(s)	59, 602
BsiHKAI	GWGCWC	2 cut(s)	763, 1988
BsiHKCI	CYCGRG	2 cut(s)	1181, 1494
BsiSI	CCGG	4 cut(s)	60, 603, 711, 1495
BslI	CCNNNNNNNGG	4 cut(s)	834, 1055, 1458, 1648
BsmAI	GTCTC	3 cut(s)	414, 1888, 2028
BsmI	GAATGC	2 cut(s)	1673, 1755
BsnI	GGCC	3 cut(s)	423, 1077, 1939
Bso31I	GGTCTC	1 cut(s)	2028
BsoBI	CYCGRG	2 cut(s)	1181, 1494
Bsp119I	TTCGAA	1 cut(s)	386
Bsp1286I	GDGCHC	4 cut(s)	246, 763, 1193, 1988
Bsp13I	TCCGGA	1 cut(s)	710
Bsp1407I	TGTACA	1 cut(s)	624
Bsp143I	GATC	8 cut(s)	3, 251, 364, 508, 675, 1600, 1819, 2059
Bsp1720I	GCTNAGC	2 cut(s)	245, 932
BspANI	GGCC	3 cut(s)	423, 1077, 1939
BspCNI	CTCAG	4 cut(s)	215, 258, 424, 556
BspEI	TCCGGA	1 cut(s)	710
BspFNI	CGCG	1 cut(s)	1888
BspHI	TCATGA	1 cut(s)	1816
BspLI	GGNNCC	3 cut(s)	677, 1192, 1926
BspMAI	CTGCAG	2 cut(s)	588, 1012
BspMI	ACCTGC	1 cut(s)	1135
BspPI	GGATC	4 cut(s)	259, 516, 670, 683
BspT104I	TTCGAA	1 cut(s)	386
BspTNI	GGTCTC	1 cut(s)	2028
BsrFI	RCCGGY	2 cut(s)	59, 602
BsrGI	TGTACA	1 cut(s)	624
BsrI	ACTGG	2 cut(s)	535, 823
BssAI	RCCGGY	2 cut(s)	59, 602
BssECI	CCNNGG	3 cut(s)	238, 1494, 1642
BssMI	GATC	8 cut(s)	3, 251, 364, 508, 675, 1600, 1819, 2059
BssT1I	CCWWGG	2 cut(s)	238, 1642
Bst2UI	CCWGG	2 cut(s)	724, 756
Bst6I	CTCTTC	1 cut(s)	811
BstAUI	TGTACA	1 cut(s)	624
BstBI	TTCGAA	1 cut(s)	386
BstC8I	GCNNGC	6 cut(s)	270, 274, 864, 938, 1174, 1409
BstDEI	CTNAG	7 cut(s)	202, 245, 411, 543, 932, 966, 1215
BstEII	GGTNACC	1 cut(s)	164
BstF5I	GGATG	3 cut(s)	1441, 1556, 1653
BstFNI	CGCG	1 cut(s)	1888
BstHHI	GCGC	2 cut(s)	880, 942
BstKTI	GATC	8 cut(s)	6, 254, 367, 511, 678, 1603, 1822, 2062
BstMAI	GTCTC	3 cut(s)	414, 1888, 2028
BstMBI	GATC	8 cut(s)	3, 251, 364, 508, 675, 1600, 1819, 2059
BstMWI	GCNNNNNNNGC	6 cut(s)	839, 937, 1337, 1605, 1691, 1978
BstNI	CCWGG	2 cut(s)	724, 756
BstNSI	RCATGY	3 cut(s)	201, 1381, 1432
BstPI	GGTNACC	1 cut(s)	164
BstSCI	CCNGG	4 cut(s)	722, 754, 1493, 1494
BstSFI	CTRYAG	5 cut(s)	584, 810, 1008, 1207, 1441
BstSLI	GKGCMC	1 cut(s)	763
BstUI	CGCG	1 cut(s)	1888
BstV1I	GCAGC	6 cut(s)	807, 810, 846, 1022, 2058, 2078
BstV2I	GAAGAC	1 cut(s)	720
BstX2I	RGATCY	4 cut(s)	364, 508, 675, 2059
BstXI	CCANNNNNNTGG	2 cut(s)	668, 1643
BstYI	RGATCY	4 cut(s)	364, 508, 675, 2059
BsuI	GTATCC	2 cut(s)	254, 1646
BsuRI	GGCC	3 cut(s)	423, 1077, 1939
BtgZI	GCGATG	1 cut(s)	1321
BtrI	CACGTC	1 cut(s)	1202
BtsCI	GGATG	3 cut(s)	1441, 1556, 1653
BtsI	GCAGTG	3 cut(s)	1488, 1790, 1853
BtsIMutI	CAGTG	7 cut(s)	411, 816, 1067, 1488, 1790, 1829, 1853
BveI	ACCTGC	1 cut(s)	1135
Cac8I	GCNNGC	6 cut(s)	270, 274, 864, 938, 1174, 1409
CciI	TCATGA	1 cut(s)	1816
CfoI	GCGC	2 cut(s)	880, 942
Cfr10I	RCCGGY	2 cut(s)	59, 602
Cfr13I	GGNCC	1 cut(s)	734
Cfr9I	CCCGGG	1 cut(s)	1494
Csp6I	GTAC	6 cut(s)	358, 395, 625, 1393, 1507, 1629
CspAI	ACCGGT	2 cut(s)	59, 602
CspCI	CAANNNNNGTGG	2 cut(s)	772, 807
CviQI	GTAC	6 cut(s)	358, 395, 625, 1393, 1507, 1629
DdeI	CTNAG	7 cut(s)	202, 245, 411, 543, 932, 966, 1215
DpnI	GATC	8 cut(s)	5, 253, 366, 510, 677, 1602, 1821, 2061
DpnII	GATC	8 cut(s)	3, 251, 364, 508, 675, 1600, 1819, 2059
DraIII	CACNNNGTG	1 cut(s)	1859
EaeI	YGGCCR	2 cut(s)	1075, 1937
Eam1104I	CTCTTC	1 cut(s)	811
EarI	CTCTTC	1 cut(s)	811
EciI	GGCGGA	1 cut(s)	732
Ecl136II	GAGCTC	1 cut(s)	1986
Eco130I	CCWWGG	2 cut(s)	238, 1642
Eco24I	GRGCYC	3 cut(s)	246, 1193, 1988
Eco31I	GGTCTC	1 cut(s)	2028
Eco32I	GATATC	1 cut(s)	1900
Eco47I	GGWCC	1 cut(s)	734
Eco53kI	GAGCTC	1 cut(s)	1986
Eco57I	CTGAAG	1 cut(s)	1381
Eco88I	CYCGRG	2 cut(s)	1181, 1494
Eco91I	GGTNACC	1 cut(s)	164
EcoICRI	GAGCTC	1 cut(s)	1986
EcoO65I	GGTNACC	1 cut(s)	164
EcoRII	CCWGG	2 cut(s)	722, 754
EcoRV	GATATC	1 cut(s)	1900
EcoT14I	CCWWGG	2 cut(s)	238, 1642
EcoT22I	ATGCAT	1 cut(s)	1673
EcoT38I	GRGCYC	3 cut(s)	246, 1193, 1988
ErhI	CCWWGG	2 cut(s)	238, 1642
FauI	CCCGC	1 cut(s)	1914
FblI	GTMKAC	1 cut(s)	1206
Fnu4HI	GCNGC	7 cut(s)	175, 796, 799, 860, 1011, 2047, 2067
FokI	GGATG	3 cut(s)	1448, 1543, 1660
FriOI	GRGCYC	3 cut(s)	246, 1193, 1988
Fsp4HI	GCNGC	7 cut(s)	175, 796, 799, 860, 1011, 2047, 2067
FspBI	CTAG	5 cut(s)	239, 291, 348, 1632, 2034
GlaI	GCGC	2 cut(s)	879, 941
GluI	GCNGC	7 cut(s)	175, 796, 799, 860, 1011, 2047, 2067
GsaI	CCCAGC	2 cut(s)	837, 1813
GsuI	CTGGAG	2 cut(s)	840, 1647
HaeIII	GGCC	3 cut(s)	423, 1077, 1939
HapII	CCGG	4 cut(s)	60, 603, 711, 1495
HhaI	GCGC	2 cut(s)	880, 942
Hin6I	GCGC	2 cut(s)	878, 940
HinP1I	GCGC	2 cut(s)	878, 940
HincII	GTYRAC	2 cut(s)	1759, 1846
HindII	GTYRAC	2 cut(s)	1759, 1846
HindIII	AAGCTT	3 cut(s)	274, 452, 557
HinfI	GANTC	7 cut(s)	179, 1004, 1256, 1321, 1470, 1476, 1863
HpaII	CCGG	4 cut(s)	60, 603, 711, 1495
HphI	GGTGA	5 cut(s)	176, 335, 1158, 1269, 1613
Hpy188I	TCNGA	7 cut(s)	414, 546, 994, 1363, 1435, 1475, 1951
Hpy188III	TCNNGA	8 cut(s)	86, 711, 732, 888, 1399, 1664, 1817, 1823
Hpy99I	CGWCG	1 cut(s)	2079
HpyAV	CCTTC	4 cut(s)	685, 756, 1187, 1225
HpyCH4IV	ACGT	2 cut(s)	898, 1201
HpyF10VI	GCNNNNNNNGC	6 cut(s)	839, 937, 1337, 1605, 1691, 1978
HpyF3I	CTNAG	7 cut(s)	202, 245, 411, 543, 932, 966, 1215
HpySE526I	ACGT	2 cut(s)	898, 1201
HspAI	GCGC	2 cut(s)	878, 940
Kpn2I	TCCGGA	1 cut(s)	710
Kzo9I	GATC	8 cut(s)	3, 251, 364, 508, 675, 1600, 1819, 2059
LmnI	GCTCC	4 cut(s)	1196, 1666, 1780, 1924
Lsp1109I	GCAGC	6 cut(s)	807, 810, 846, 1022, 2058, 2078
LweI	GCATC	2 cut(s)	919, 1816
MaeI	CTAG	5 cut(s)	239, 291, 348, 1632, 2034
MaeII	ACGT	2 cut(s)	898, 1201
MalI	GATC	8 cut(s)	5, 253, 366, 510, 677, 1602, 1821, 2061
MboI	GATC	8 cut(s)	3, 251, 364, 508, 675, 1600, 1819, 2059
MboII	GAAGA	7 cut(s)	720, 798, 894, 897, 903, 1110, 2069
MfeI	CAATTG	2 cut(s)	1020, 1053
MflI	RGATCY	4 cut(s)	364, 508, 675, 2059
MhlI	GDGCHC	4 cut(s)	246, 763, 1193, 1988
MlyI	GAGTC	3 cut(s)	188, 1479, 1857
MmeI	TCCRAC	3 cut(s)	128, 486, 1413
Mph1103I	ATGCAT	1 cut(s)	1673
MroI	TCCGGA	1 cut(s)	710
MroXI	GAANNNNTTC	2 cut(s)	559, 898
MseI	TTAA	5 cut(s)	102, 278, 302, 456, 1245
MslI	CAYNNNNRTG	1 cut(s)	23
MspA1I	CMGCKG	3 cut(s)	249, 1778, 1921
MspI	CCGG	4 cut(s)	60, 603, 711, 1495
MspR9I	CCNGG	4 cut(s)	724, 756, 1495, 1496
MunI	CAATTG	2 cut(s)	1020, 1053
Mva1269I	GAATGC	2 cut(s)	1673, 1755
MvaI	CCWGG	2 cut(s)	724, 756
MvnI	CGCG	1 cut(s)	1888
MwoI	GCNNNNNNNGC	6 cut(s)	839, 937, 1337, 1605, 1691, 1978
NciI	CCSGG	2 cut(s)	1495, 1496
NdeII	GATC	8 cut(s)	3, 251, 364, 508, 675, 1600, 1819, 2059
NlaIV	GGNNCC	3 cut(s)	677, 1192, 1926
NmuCI	GTSAC	6 cut(s)	164, 286, 814, 1065, 1370, 1833
NsiI	ATGCAT	1 cut(s)	1673
NspI	RCATGY	3 cut(s)	201, 1381, 1432
NspV	TTCGAA	1 cut(s)	386
PagI	TCATGA	1 cut(s)	1816
PciI	ACATGT	2 cut(s)	1377, 1428
PctI	GAATGC	2 cut(s)	1673, 1755
PdmI	GAANNNNTTC	2 cut(s)	559, 898
PfeI	GAWTC	4 cut(s)	1004, 1256, 1321, 1476
PflMI	CCANNNNNTGG	1 cut(s)	1055
PinAI	ACCGGT	2 cut(s)	59, 602
PkrI	GCNGC	7 cut(s)	176, 797, 800, 861, 1012, 2048, 2068
PleI	GAGTC	3 cut(s)	187, 1478, 1857
PpsI	GAGTC	3 cut(s)	187, 1478, 1857
PscI	ACATGT	2 cut(s)	1377, 1428
PsiI	TTATAA	1 cut(s)	872
Psp124BI	GAGCTC	1 cut(s)	1988
Psp1406I	AACGTT	1 cut(s)	898
Psp6I	CCWGG	2 cut(s)	722, 754
PspEI	GGTNACC	1 cut(s)	164
PspFI	CCCAGC	2 cut(s)	833, 1809
PspGI	CCWGG	2 cut(s)	722, 754
PspN4I	GGNNCC	3 cut(s)	677, 1192, 1926
PspPI	GGNCC	1 cut(s)	734
PstI	CTGCAG	2 cut(s)	588, 1012
PsuI	RGATCY	4 cut(s)	364, 508, 675, 2059
RsaI	GTAC	6 cut(s)	359, 396, 626, 1394, 1508, 1630
RsaNI	GTAC	6 cut(s)	358, 395, 625, 1393, 1507, 1629
RseI	CAYNNNNRTG	1 cut(s)	23
SacI	GAGCTC	1 cut(s)	1988
SaqAI	TTAA	5 cut(s)	102, 278, 302, 456, 1245
SatI	GCNGC	7 cut(s)	175, 796, 799, 860, 1011, 2047, 2067
Sau3AI	GATC	8 cut(s)	3, 251, 364, 508, 675, 1600, 1819, 2059
Sau96I	GGNCC	1 cut(s)	734
ScaI	AGTACT	1 cut(s)	1394
SchI	GAGTC	3 cut(s)	188, 1479, 1857
ScrFI	CCNGG	4 cut(s)	724, 756, 1495, 1496
SduI	GDGCHC	4 cut(s)	246, 763, 1193, 1988
SfaNI	GCATC	2 cut(s)	919, 1816
SfcI	CTRYAG	5 cut(s)	584, 810, 1008, 1207, 1441
SfuI	TTCGAA	1 cut(s)	386
SinI	GGWCC	1 cut(s)	734
SmaI	CCCGGG	1 cut(s)	1496
SmiMI	CAYNNNNRTG	1 cut(s)	23
SmlI	CTYRAG	1 cut(s)	84
SmoI	CTYRAG	1 cut(s)	84
SrfI	GCCCGGGC	1 cut(s)	1496
SspI	AATATT	1 cut(s)	1564
SspMI	CTAG	5 cut(s)	239, 291, 348, 1632, 2034
SstI	GAGCTC	1 cut(s)	1988
StyD4I	CCNGG	4 cut(s)	722, 754, 1493, 1494
StyI	CCWWGG	2 cut(s)	238, 1642
TaiI	ACGT	2 cut(s)	901, 1204
TaqI	TCGA	5 cut(s)	386, 651, 918, 1747, 1824
TatI	WGTACW	3 cut(s)	357, 624, 1392
TauI	GCSGC	1 cut(s)	177
TfiI	GAWTC	4 cut(s)	1004, 1256, 1321, 1476
Tru1I	TTAA	5 cut(s)	102, 278, 302, 456, 1245
Tru9I	TTAA	5 cut(s)	102, 278, 302, 456, 1245
TscAI	CASTG	7 cut(s)	411, 823, 1074, 1495, 1790, 1836, 1860
TseFI	GTSAC	6 cut(s)	164, 286, 814, 1065, 1370, 1833
TseI	GCWGC	6 cut(s)	795, 798, 859, 1010, 2046, 2066
Tsp45I	GTSAC	6 cut(s)	164, 286, 814, 1065, 1370, 1833
TspDTI	ATGAA	3 cut(s)	951, 1051, 1805
TspGWI	ACGGA	1 cut(s)	474
TspMI	CCCGGG	1 cut(s)	1494
TspRI	CASTG	7 cut(s)	411, 823, 1074, 1495, 1790, 1836, 1860
Van91I	CCANNNNNTGG	1 cut(s)	1055
VneI	GTGCAC	1 cut(s)	759
VpaK11BI	GGWCC	1 cut(s)	734
XapI	RAATTY	3 cut(s)	1289, 1418, 1931
XceI	RCATGY	3 cut(s)	201, 1381, 1432
XmaI	CCCGGG	1 cut(s)	1494
XmaJI	CCTAGG	1 cut(s)	238
XmiI	GTMKAC	1 cut(s)	1206
XmnI	GAANNNNTTC	2 cut(s)	559, 898
XspI	CTAG	5 cut(s)	239, 291, 348, 1632, 2034
ZrmI	AGTACT	1 cut(s)	1394
Zsp2I	ATGCAT	1 cut(s)	1673

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.