Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0012110

Physical Location & Seq

Genomic Coordinates Forward (+)

70635689 .. 70640541

Gene Structure 4853 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG488500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2100 bp

ATGTTCCACAACCTTCTTGTGTTGTGGGGTGTTCTGTTTGGATTCTTCACCGTCTGCGTTTATTCGAACACCAATTCCCAAGATGTTACTGCCCTTAATGTGATGTATAACAGCTTAACCTCTAAGTCAAAACTAAGTGGTTGGAAATCAAGTGGCGGTGACCCTTGTGGTGATTCTTGGAAAGGGATCAAATGCTCAGGCTCATCTGTAACTGAAATAAAGTTGTCTGACCTTGATCTCAGTGGATCAATGGGGTACCAGCTTGCAAGCTTAACATCCGTCACCTCCTTTGACGTAAGCAACAACAAATTCAGTGGTGATATACCATATCAACTGCCTCCTAACGCAAAGCAAATAGATCTTTCCAACAATGGCTTCACAAATACCGTACCCTATTCAGTATCTCAGATGTCCAACCTTGAAACTCTAAATCTTGGTCATAACAAGCTCAGTGGACAGTTGACTGATATGTTTAATAAACTTACTAAACTTAAAAAGCTGGATCTATCTCACAACTCACTGACTGGCAACTTGCCTCAGAGTTTTGCAAAGCTCTCAAGCCTCAGGACATTGTATCTGCAGAACAATCAATTTACTGGGACGATAAATGTCCTACTGTACACTCCCGTTGATGATTTGAATGTTGAAAACAACCACTTTACTGGCTGGATCCCTAATGATTTGAAGAGCATAAACATAAAGTCTGGAGGAAACAATTGGTCATCTGGGCCATCTCCACCTTCTCCTCCTGGTGTATACCGTAATAGGGGGTCAGGCAGCAGTAGCAGTGGTGGTGGGGAGAAGTCTTCAGTAGCCAAAGGATTGACAATAGCTGGGATAGCTTTCGCCGTGTTGTTTCTGCTTGGAATTCTAATTTTCTGCTGTTCAAGAAAGAAACGTTCTAAAAATTCCCATCTCCTTGAGGATGATAGGTTTGACAAGCGGAAATCCTTCTCTATGTTTTCATCTAGGGACTTGACTAAAGACATGCATTCTGACTATGATGGCTTGAAGTCTACGGATTCTCCAGCCATTATTGACATAAAGCCTGTTCAAAAATCTCCATCAACTGGTTTTAAGTCCCTTTCTGGCCGGTTGCAATCCTTTGCCAGAAGAAGCACCTCTGTGAAAGCTGTATCTTACGCTTTAGCAGACTTGCAGGTTGCGACAGGTAATTTTGCACCAGCTCGCCTTCTTGGGCAGGGCTCCATTGGACGTGTTTATAAGGCCAAATTTGAAAGTGGGAAGATTTTGGCTGTGAAAAAAATTGACTCCTCACTGTTCCAAGGAGCACCACCACAAGAATTTTCTGACATCGTTGTGAGCATCTCCAAGATTCGTCATGCCAACGTTGCCGAACTTGTTGGTTATTGTGCAGAACTAGGGCACCACATGTTAATTTACGAGTATTTCAGGAATGGCTCACTTAATGAGTTCTTACACATGTCAGATGACTACAGCAATCCTCTAACTTGGAACACAAGAGTCAAGATTGCTTTGGGCACTGCGCGTGCTATTGAGTACCTCCATGAGGTTTGCTCTCCATCCGTAATTCACAAGAACATCAAATCATCTAATATTTTTCTTGACCTTGAACTCAATCCTCGTCTCTCTGATTATGGCTTGGCAACCTTTCATCAGCGCACTAGCCAAAACCTAGGGACGGGATACAATGCACCAGAATGCACGAAGCCATCAGCTTATACATTGAAGAGTGATGTTTACAGCTTTGGGGTAGTCATGTTGGAATTATTGACAGGTCGTAAGCCAGTTGACAGTTCAAAACCACGGTCGGAGGAGTGCCTTGTCCGATGGGCAACCCCACAGCTCCATGATCTCGACGCATTGTCAAAAATAGTCGACCCTGCCCTGCGAGGACTCTACGATCCCAAGTCAGTCTCCCGTTTTGCTGATATCATTGCCCTATGCGTTCAGCGAGAGTCCGAATTTCGGCCACCTATCTCAGAAGTTGTTCAGCAGTTGGTGCGGCTAGTTCAGCGCTCGACCGTGAACATGGATCTTGGTCTTTCTCGTCACTCTAGTAACTCGAGCAGCTATAGAGAAGATCTCCAATCTTCTCGTCGGCTGACTGACTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

699

Amino Acids

76.89

Weight (kDa)

9.15

Isoelectric Point (pI)

43.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	26 - 66	3.3e-09	Leucine rich repeat N-terminal domain
LRR_8	PF13855	156 - 198	2e-09	Leucine rich repeat
LRR_4	PF12799	162 - 199	2.6e-06	Leucine Rich repeats (2 copies)
Pkinase	PF00069	396 - 660	3.2e-36	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	397 - 661	9.1e-38	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012110)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78980
fragaria_vesca	FvH4_6g36490
malus_domestica	MD09G1168400.v1.1 MD17G1158200.v1.1 MD17G1158500.v1.1
prunus_persica	Prupe.3G026900_v2.0.a1 Prupe.3G026900_v2.0.a1 Prupe.3G026900_v2.0.a1
pyrus_communis	pycom17g15170
rosa_chinensis	RchiOBHm_Chr2g0148621
rosa_laevigata	RLG00000020356
rosa_multiflora	Rmu_sc0000048.1_g000025
rosa_roxburghii	Rroxscaffold_2G00098590
rosa_rugosa	Rorug02G0408200
rosa_samantha	Rh2AG466600 Rh2BG479700 Rh2CG453100 Rh2DG488500
rosa_wichuraiana	Rw2G038050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1224
Acc36I	ACCTGC	1 cut(s)	1150
Acc65I	GGTACC	1 cut(s)	255
AccB1I	GGYRCC	2 cut(s)	255, 1386
AccB7I	CCANNNNNTGG	1 cut(s)	1070
AccI	GTMKAC	3 cut(s)	756, 1016, 1860
AccII	CGCG	1 cut(s)	1510
AciI	CCGC	3 cut(s)	156, 943, 1987
AclI	AACGTT	2 cut(s)	898, 1350
AclWI	GGATC	7 cut(s)	194, 253, 510, 664, 677, 1880, 2025
AcoI	YGGCCR	2 cut(s)	1090, 1952
AcsI	RAATTY	6 cut(s)	308, 867, 907, 1232, 1304, 1946
AcuI	CTGAAG	1 cut(s)	792
AfaI	GTAC	4 cut(s)	257, 390, 620, 1523
AfeI	AGCGCT	1 cut(s)	2000
AfiI	CCNNNNNNNGG	5 cut(s)	766, 1070, 1531, 1663, 1950
AflIII	ACRYGT	3 cut(s)	1216, 1392, 1443
AhdI	GACNNNNNGTC	1 cut(s)	1846
AjiI	CACGTC	1 cut(s)	1217
AjnI	CCWGG	1 cut(s)	748
AjuI	GAANNNNNNNTTGG	2 cut(s)	359, 391
AleI	CACNNNNGTG	1 cut(s)	1124
AloI	GAACNNNNNNTCC	2 cut(s)	59, 91
Alw21I	GWGCWC	1 cut(s)	1294
Alw26I	GTCTC	2 cut(s)	1613, 1903
AlwI	GGATC	7 cut(s)	194, 253, 510, 664, 677, 1880, 2025
Ama87I	CYCGRG	1 cut(s)	2047
Aor51HI	AGCGCT	1 cut(s)	2000
AoxI	GGCC	4 cut(s)	728, 1090, 1227, 1952
ApeKI	GCWGC	2 cut(s)	777, 2052
ApoI	RAATTY	6 cut(s)	308, 867, 907, 1232, 1304, 1946
ArsI	GACNNNNNNTTYG	2 cut(s)	1775, 1807
Asp700I	GAANNNNTTC	2 cut(s)	950, 1971
Asp718I	GGTACC	1 cut(s)	255
AspA2I	CCTAGG	1 cut(s)	1657
AspLEI	GCGC	3 cut(s)	1510, 1644, 2001
AspS9I	GGNCC	1 cut(s)	728
AsuHPI	GGTGA	5 cut(s)	40, 170, 182, 274, 329
AsuII	TTCGAA	1 cut(s)	65
AvaI	CYCGRG	1 cut(s)	2047
AvrII	CCTAGG	1 cut(s)	1657
AxyI	CCTNAGG	1 cut(s)	563
BaeGI	GKGCMC	2 cut(s)	1389, 1505
BamHI	GGATCC	1 cut(s)	669
BanI	GGYRCC	2 cut(s)	255, 1386
BanII	GRGCYC	1 cut(s)	1208
BbsI	GAAGAC	1 cut(s)	798
Bbv12I	GWGCWC	1 cut(s)	1294
BbvI	GCAGC	2 cut(s)	789, 2064
BccI	CCATC	7 cut(s)	739, 921, 998, 1072, 1552, 1702, 1806
BceAI	ACGGC	1 cut(s)	833
BciT130I	CCWGG	1 cut(s)	750
BciVI	GTATCC	1 cut(s)	1661
BcoDI	GTCTC	2 cut(s)	1613, 1903
BfaI	CTAG	6 cut(s)	969, 1382, 1647, 1658, 1991, 2040
BfmI	CTRYAG	3 cut(s)	578, 1456, 2056
BfoI	RGCGCY	1 cut(s)	2002
BfuAI	ACCTGC	1 cut(s)	1150
BfuI	GTATCC	1 cut(s)	1661
BglII	AGATCT	2 cut(s)	358, 2065
BisI	GCNGC	3 cut(s)	778, 1988, 2053
BlnI	CCTAGG	1 cut(s)	1657
BlsI	GCNGC	3 cut(s)	779, 1989, 2054
Bme1390I	CCNGG	1 cut(s)	750
BmeRI	GACNNNNNGTC	1 cut(s)	1846
BmeT110I	CYCGRG	1 cut(s)	2047
BmgBI	CACGTC	1 cut(s)	1217
BmgT120I	GGNCC	1 cut(s)	728
BmiI	GGNNCC	4 cut(s)	257, 671, 1207, 1388
BmrFI	CCNGG	1 cut(s)	750
BmrI	ACTGGG	1 cut(s)	606
BmsI	GCATC	1 cut(s)	1335
BmuI	ACTGGG	1 cut(s)	606
BpiI	GAAGAC	1 cut(s)	798
BplI	GAGNNNNNCTC	4 cut(s)	1523, 1555, 2052, 2084
BpmI	CTGGAG	2 cut(s)	726, 1011
Bpu10I	CCTNAGC	1 cut(s)	196
Bpu14I	TTCGAA	1 cut(s)	65
BpuEI	CTTGAG	2 cut(s)	541, 941
BsaJI	CCNNGG	3 cut(s)	1285, 1657, 1787
BsaXI	ACNNNNNCTCC	2 cut(s)	1009, 1039
Bsc4I	CCNNNNNNNGG	5 cut(s)	766, 1070, 1531, 1663, 1950
Bse118I	RCCGGY	1 cut(s)	1092
Bse1I	ACTGG	5 cut(s)	529, 601, 667, 1075, 1769
Bse21I	CCTNAGG	1 cut(s)	563
Bse3DI	GCAATG	1 cut(s)	1917
BseBI	CCWGG	1 cut(s)	750
BseDI	CCNNGG	3 cut(s)	1285, 1657, 1787
BseGI	GGATG	3 cut(s)	275, 931, 1544
BseLI	CCNNNNNNNGG	5 cut(s)	766, 1070, 1531, 1663, 1950
BseMI	GCAATG	1 cut(s)	1917
BseMII	CTCAG	7 cut(s)	210, 253, 419, 463, 551, 577, 1977
BseNI	ACTGG	5 cut(s)	529, 601, 667, 1075, 1769
BseRI	GAGGAG	3 cut(s)	735, 1264, 1811
BseSI	GKGCMC	2 cut(s)	1389, 1505
BseXI	GCAGC	2 cut(s)	789, 2064
BseYI	CCCAGC	1 cut(s)	833
BsgI	GTGCAG	1 cut(s)	1395
Bsh1236I	CGCG	1 cut(s)	1510
Bsh1285I	CGRYCG	2 cut(s)	1793, 2007
BshFI	GGCC	4 cut(s)	730, 1092, 1229, 1954
BshNI	GGYRCC	2 cut(s)	255, 1386
BsiEI	CGRYCG	2 cut(s)	1793, 2007
BsiHKAI	GWGCWC	1 cut(s)	1294
BsiHKCI	CYCGRG	1 cut(s)	2047
BsiSI	CCGG	1 cut(s)	1093
BslFI	GGGAC	4 cut(s)	613, 986, 1066, 1675
BslI	CCNNNNNNNGG	5 cut(s)	766, 1070, 1531, 1663, 1950
BsmAI	GTCTC	2 cut(s)	1613, 1903
BsmBI	CGTCTC	1 cut(s)	1613
BsmFI	GGGAC	4 cut(s)	613, 986, 1066, 1675
BsmI	GAATGC	2 cut(s)	991, 1688
BsnI	GGCC	4 cut(s)	730, 1092, 1229, 1954
BsoBI	CYCGRG	1 cut(s)	2047
Bsp119I	TTCGAA	1 cut(s)	65
Bsp1286I	GDGCHC	4 cut(s)	1208, 1294, 1389, 1505
Bsp1407I	TGTACA	1 cut(s)	618
BspACI	CCGC	3 cut(s)	156, 943, 1987
BspANI	GGCC	4 cut(s)	730, 1092, 1229, 1954
BspCNI	CTCAG	7 cut(s)	209, 252, 418, 462, 550, 576, 1976
BspFNI	CGCG	1 cut(s)	1510
BspLI	GGNNCC	4 cut(s)	257, 671, 1207, 1388
BspMAI	CTGCAG	1 cut(s)	582
BspMI	ACCTGC	1 cut(s)	1150
BspPI	GGATC	7 cut(s)	194, 253, 510, 664, 677, 1880, 2025
BspQI	GCTCTTC	1 cut(s)	680
BspT104I	TTCGAA	1 cut(s)	65
BspT107I	GGYRCC	2 cut(s)	255, 1386
BsrDI	GCAATG	1 cut(s)	1917
BsrFI	RCCGGY	1 cut(s)	1092
BsrGI	TGTACA	1 cut(s)	618
BsrI	ACTGG	5 cut(s)	529, 601, 667, 1075, 1769
BssAI	RCCGGY	1 cut(s)	1092
BssECI	CCNNGG	3 cut(s)	1285, 1657, 1787
BssNAI	GTATAC	1 cut(s)	757
BssT1I	CCWWGG	2 cut(s)	1285, 1657
Bst1107I	GTATAC	1 cut(s)	757
Bst2UI	CCWGG	1 cut(s)	750
Bst4CI	ACNGT	9 cut(s)	52, 388, 459, 618, 761, 1281, 1778, 1791, 2008
Bst6I	CTCTTC	2 cut(s)	680, 1706
BstAPI	GCANNNNNTGC	1 cut(s)	1984
BstAUI	TGTACA	1 cut(s)	618
BstBI	TTCGAA	1 cut(s)	65
BstC8I	GCNNGC	4 cut(s)	264, 268, 1189, 1512
BstDEI	CTNAG	9 cut(s)	123, 134, 196, 239, 405, 449, 537, 563, 1963
BstDSI	CCRYGG	1 cut(s)	1787
BstEII	GGTNACC	1 cut(s)	158
BstENI	CCTNNNNNAGG	1 cut(s)	1529
BstF5I	GGATG	3 cut(s)	275, 931, 1544
BstFNI	CGCG	1 cut(s)	1510
BstH2I	RGCGCY	1 cut(s)	2002
BstHHI	GCGC	3 cut(s)	1510, 1644, 2001
BstMAI	GTCTC	2 cut(s)	1613, 1903
BstMCI	CGRYCG	2 cut(s)	1793, 2007
BstMWI	GCNNNNNNNGC	5 cut(s)	783, 839, 1352, 1984, 1996
BstNI	CCWGG	1 cut(s)	750
BstNSI	RCATGY	3 cut(s)	991, 1396, 1447
BstPI	GGTNACC	1 cut(s)	158
BstSCI	CCNGG	1 cut(s)	748
BstSFI	CTRYAG	3 cut(s)	578, 1456, 2056
BstSLI	GKGCMC	2 cut(s)	1389, 1505
BstUI	CGCG	1 cut(s)	1510
BstV1I	GCAGC	2 cut(s)	789, 2064
BstV2I	GAAGAC	1 cut(s)	798
BstX2I	RGATCY	5 cut(s)	358, 502, 669, 2017, 2065
BstXI	CCANNNNNNTGG	1 cut(s)	662
BstYI	RGATCY	5 cut(s)	358, 502, 669, 2017, 2065
BstZ17I	GTATAC	1 cut(s)	757
Bsu36I	CCTNAGG	1 cut(s)	563
BsuI	GTATCC	1 cut(s)	1661
BsuRI	GGCC	4 cut(s)	730, 1092, 1229, 1954
BtgI	CCRYGG	1 cut(s)	1787
BtrI	CACGTC	1 cut(s)	1217
BtsCI	GGATG	3 cut(s)	275, 931, 1544
BtsI	GCAGTG	2 cut(s)	793, 1503
BtsIMutI	CAGTG	7 cut(s)	247, 319, 457, 518, 793, 1277, 1503
BveI	ACCTGC	1 cut(s)	1150
Cac8I	GCNNGC	4 cut(s)	264, 268, 1189, 1512
CfoI	GCGC	3 cut(s)	1510, 1644, 2001
Cfr10I	RCCGGY	1 cut(s)	1092
Cfr13I	GGNCC	1 cut(s)	728
CseI	GACGC	1 cut(s)	1850
Csp6I	GTAC	4 cut(s)	256, 389, 619, 1522
CspCI	CAANNNNNGTGG	4 cut(s)	295, 330, 433, 468
CviAII	CATG	8 cut(s)	988, 1343, 1393, 1444, 1529, 1741, 1832, 2014
CviQI	GTAC	4 cut(s)	256, 389, 619, 1522
DdeI	CTNAG	9 cut(s)	123, 134, 196, 239, 405, 449, 537, 563, 1963
DriI	GACNNNNNGTC	1 cut(s)	1846
EaeI	YGGCCR	2 cut(s)	1090, 1952
Eam1104I	CTCTTC	2 cut(s)	680, 1706
Eam1105I	GACNNNNNGTC	1 cut(s)	1846
EarI	CTCTTC	2 cut(s)	680, 1706
Eco130I	CCWWGG	2 cut(s)	1285, 1657
Eco24I	GRGCYC	1 cut(s)	1208
Eco32I	GATATC	1 cut(s)	1915
Eco47III	AGCGCT	1 cut(s)	2000
Eco57I	CTGAAG	1 cut(s)	792
Eco81I	CCTNAGG	1 cut(s)	563
Eco88I	CYCGRG	1 cut(s)	2047
Eco91I	GGTNACC	1 cut(s)	158
EcoNI	CCTNNNNNAGG	1 cut(s)	1529
EcoO65I	GGTNACC	1 cut(s)	158
EcoRI	GAATTC	1 cut(s)	867
EcoRII	CCWGG	1 cut(s)	748
EcoRV	GATATC	1 cut(s)	1915
EcoT14I	CCWWGG	2 cut(s)	1285, 1657
EcoT22I	ATGCAT	1 cut(s)	993
EcoT38I	GRGCYC	1 cut(s)	1208
ErhI	CCWWGG	2 cut(s)	1285, 1657
Esp3I	CGTCTC	1 cut(s)	1613
FaeI	CATG	8 cut(s)	991, 1346, 1396, 1447, 1532, 1744, 1835, 2017
FaqI	GGGAC	4 cut(s)	613, 986, 1066, 1675
FatI	CATG	8 cut(s)	987, 1342, 1392, 1443, 1528, 1740, 1831, 2013
FblI	GTMKAC	3 cut(s)	756, 1016, 1860
Fnu4HI	GCNGC	3 cut(s)	778, 1988, 2053
FokI	GGATG	3 cut(s)	262, 938, 1531
FriOI	GRGCYC	1 cut(s)	1208
Fsp4HI	GCNGC	3 cut(s)	778, 1988, 2053
FspBI	CTAG	6 cut(s)	969, 1382, 1647, 1658, 1991, 2040
GlaI	GCGC	3 cut(s)	1509, 1643, 2000
GluI	GCNGC	3 cut(s)	778, 1988, 2053
GsaI	CCCAGC	1 cut(s)	837
GsuI	CTGGAG	2 cut(s)	726, 1011
HaeII	RGCGCY	1 cut(s)	2002
HaeIII	GGCC	4 cut(s)	730, 1092, 1229, 1954
HapII	CCGG	1 cut(s)	1093
HgaI	GACGC	1 cut(s)	1850
HhaI	GCGC	3 cut(s)	1510, 1644, 2001
Hin1II	CATG	8 cut(s)	991, 1346, 1396, 1447, 1532, 1744, 1835, 2017
Hin6I	GCGC	3 cut(s)	1508, 1642, 1999
HinP1I	GCGC	3 cut(s)	1508, 1642, 1999
HincII	GTYRAC	3 cut(s)	462, 1774, 1861
HindII	GTYRAC	3 cut(s)	462, 1774, 1861
HindIII	AAGCTT	1 cut(s)	268
HinfI	GANTC	8 cut(s)	42, 173, 1022, 1271, 1336, 1485, 1878, 1940
HpaII	CCGG	1 cut(s)	1093
HphI	GGTGA	5 cut(s)	40, 170, 182, 274, 329
Hpy166II	GTNNAC	9 cut(s)	455, 462, 621, 757, 1017, 1723, 1774, 1861, 2011
Hpy188III	TCNNGA	7 cut(s)	565, 705, 888, 1414, 1489, 1586, 1838
Hpy8I	GTNNAC	9 cut(s)	455, 462, 621, 757, 1017, 1723, 1774, 1861, 2011
Hpy99I	CGWCG	2 cut(s)	1844, 2085
HpyAV	CCTTC	4 cut(s)	23, 750, 961, 1202
HpyCH4III	ACNGT	9 cut(s)	52, 388, 459, 618, 761, 1281, 1778, 1791, 2008
HpyCH4IV	ACGT	4 cut(s)	294, 898, 1216, 1350
HpyF10VI	GCNNNNNNNGC	5 cut(s)	783, 839, 1352, 1984, 1996
HpyF3I	CTNAG	9 cut(s)	123, 134, 196, 239, 405, 449, 537, 563, 1963
HpySE526I	ACGT	4 cut(s)	294, 898, 1216, 1350
Hsp92II	CATG	8 cut(s)	991, 1346, 1396, 1447, 1532, 1744, 1835, 2017
HspAI	GCGC	3 cut(s)	1508, 1642, 1999
KpnI	GGTACC	1 cut(s)	259
LguI	GCTCTTC	1 cut(s)	680
LmnI	GCTCC	3 cut(s)	1211, 1289, 1833
Lsp1109I	GCAGC	2 cut(s)	789, 2064
LweI	GCATC	1 cut(s)	1335
MaeI	CTAG	6 cut(s)	969, 1382, 1647, 1658, 1991, 2040
MaeII	ACGT	4 cut(s)	294, 898, 1216, 1350
MaeIII	GTNAC	6 cut(s)	85, 158, 208, 280, 2033, 2042
MboII	GAAGA	8 cut(s)	37, 697, 798, 1125, 1258, 1723, 2067, 2075
MfeI	CAATTG	1 cut(s)	715
MflI	RGATCY	5 cut(s)	358, 502, 669, 2017, 2065
MhlI	GDGCHC	4 cut(s)	1208, 1294, 1389, 1505
MlyI	GAGTC	4 cut(s)	1265, 1494, 1872, 1949
MmeI	TCCRAC	5 cut(s)	122, 390, 438, 1725, 1773
Mph1103I	ATGCAT	1 cut(s)	993
MroXI	GAANNNNTTC	2 cut(s)	950, 1971
MseI	TTAA	8 cut(s)	96, 116, 272, 474, 492, 1077, 1397, 1428
MslI	CAYNNNNRTG	3 cut(s)	1124, 1319, 1681
MspI	CCGG	1 cut(s)	1093
MspR9I	CCNGG	1 cut(s)	750
MunI	CAATTG	1 cut(s)	715
Mva1269I	GAATGC	2 cut(s)	991, 1688
MvaI	CCWGG	1 cut(s)	750
MvnI	CGCG	1 cut(s)	1510
MwoI	GCNNNNNNNGC	5 cut(s)	783, 839, 1352, 1984, 1996
NlaIII	CATG	8 cut(s)	991, 1346, 1396, 1447, 1532, 1744, 1835, 2017
NlaIV	GGNNCC	4 cut(s)	257, 671, 1207, 1388
NmuCI	GTSAC	3 cut(s)	158, 280, 2033
NsiI	ATGCAT	1 cut(s)	993
NspI	RCATGY	3 cut(s)	991, 1396, 1447
NspV	TTCGAA	1 cut(s)	65
OliI	CACNNNNGTG	1 cut(s)	1124
PaeR7I	CTCGAG	1 cut(s)	2047
PciI	ACATGT	2 cut(s)	1392, 1443
PciSI	GCTCTTC	1 cut(s)	680
PctI	GAATGC	2 cut(s)	991, 1688
PdmI	GAANNNNTTC	2 cut(s)	950, 1971
PfeI	GAWTC	4 cut(s)	42, 173, 1022, 1336
PflMI	CCANNNNNTGG	1 cut(s)	1070
PkrI	GCNGC	3 cut(s)	779, 1989, 2054
PleI	GAGTC	4 cut(s)	1265, 1493, 1872, 1948
PpsI	GAGTC	4 cut(s)	1265, 1493, 1872, 1948
PscI	ACATGT	2 cut(s)	1392, 1443
PsiI	TTATAA	1 cut(s)	1224
Psp1406I	AACGTT	2 cut(s)	898, 1350
Psp6I	CCWGG	1 cut(s)	748
PspEI	GGTNACC	1 cut(s)	158
PspFI	CCCAGC	1 cut(s)	833
PspGI	CCWGG	1 cut(s)	748
PspN4I	GGNNCC	4 cut(s)	257, 671, 1207, 1388
PspPI	GGNCC	1 cut(s)	728
PspXI	VCTCGAGB	1 cut(s)	2047
PstI	CTGCAG	1 cut(s)	582
PsuI	RGATCY	5 cut(s)	358, 502, 669, 2017, 2065
RsaI	GTAC	4 cut(s)	257, 390, 620, 1523
RsaNI	GTAC	4 cut(s)	256, 389, 619, 1522
RseI	CAYNNNNRTG	3 cut(s)	1124, 1319, 1681
SalI	GTCGAC	1 cut(s)	1859
SapI	GCTCTTC	1 cut(s)	680
SaqAI	TTAA	8 cut(s)	96, 116, 272, 474, 492, 1077, 1397, 1428
SatI	GCNGC	3 cut(s)	778, 1988, 2053
Sau96I	GGNCC	1 cut(s)	728
SchI	GAGTC	4 cut(s)	1265, 1494, 1872, 1949
ScrFI	CCNGG	1 cut(s)	750
SduI	GDGCHC	4 cut(s)	1208, 1294, 1389, 1505
SfaNI	GCATC	1 cut(s)	1335
SfcI	CTRYAG	3 cut(s)	578, 1456, 2056
Sfr274I	CTCGAG	1 cut(s)	2047
SfuI	TTCGAA	1 cut(s)	65
SlaI	CTCGAG	1 cut(s)	2047
SmiMI	CAYNNNNRTG	3 cut(s)	1124, 1319, 1681
SmlI	CTYRAG	3 cut(s)	556, 920, 2047
SmoI	CTYRAG	3 cut(s)	556, 920, 2047
SsiI	CCGC	3 cut(s)	156, 943, 1987
SspI	AATATT	1 cut(s)	1579
SspMI	CTAG	6 cut(s)	969, 1382, 1647, 1658, 1991, 2040
StyD4I	CCNGG	1 cut(s)	748
StyI	CCWWGG	2 cut(s)	1285, 1657
TaaI	ACNGT	9 cut(s)	52, 388, 459, 618, 761, 1281, 1778, 1791, 2008
TaiI	ACGT	4 cut(s)	297, 901, 1219, 1353
TaqI	TCGA	5 cut(s)	65, 1839, 1860, 2003, 2048
TatI	WGTACW	1 cut(s)	618
TauI	GCSGC	1 cut(s)	1990
TfiI	GAWTC	4 cut(s)	42, 173, 1022, 1336
Tru1I	TTAA	8 cut(s)	96, 116, 272, 474, 492, 1077, 1397, 1428
Tru9I	TTAA	8 cut(s)	96, 116, 272, 474, 492, 1077, 1397, 1428
TscAI	CASTG	7 cut(s)	247, 319, 457, 525, 793, 1284, 1510
TseFI	GTSAC	3 cut(s)	158, 280, 2033
TseI	GCWGC	2 cut(s)	777, 2052
Tsp45I	GTSAC	3 cut(s)	158, 280, 2033
TspDTI	ATGAA	2 cut(s)	954, 1625
TspGWI	ACGGA	3 cut(s)	268, 1034, 1537
TspRI	CASTG	7 cut(s)	247, 319, 457, 525, 793, 1284, 1510
Van91I	CCANNNNNTGG	1 cut(s)	1070
XagI	CCTNNNNNAGG	1 cut(s)	1529
XapI	RAATTY	6 cut(s)	308, 867, 907, 1232, 1304, 1946
XceI	RCATGY	3 cut(s)	991, 1396, 1447
XhoI	CTCGAG	1 cut(s)	2047
XmaJI	CCTAGG	1 cut(s)	1657
XmiI	GTMKAC	3 cut(s)	756, 1016, 1860
XmnI	GAANNNNTTC	2 cut(s)	950, 1971
XspI	CTAG	6 cut(s)	969, 1382, 1647, 1658, 1991, 2040
Zsp2I	ATGCAT	1 cut(s)	993

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.