FvH4_6g39151

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
30982228 .. 30985142
2915 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g39151.t1

Sequence Viewer

Length: 1047 bp
ATGGAGGTAGCGTCGGAGCCCACCAGAGTCCAAACCCTGGCCCAAGCGGGTCTCACCCAAGTTCCACCGCAATACATTCAACCTTCCCACAACCGACCCAACCACCCTTCATCCTCCTCCGCCGTCCCCTGCATCACCCTCTTCGGACTCGACCCGACCCGCCGCGACACCGTCCGAACCTCGATCGCCCAAGCCTGCCGCGACTGGGGCGCCTTCCACGTCACCGACCACGGCATCCCCGCCTCTCTCCTCCACGACATCAGGCGCGTGGGCCTCACCTTCTTCAACGACTCCCCCGTCCAGGACAAGCTCCGCTACGCCTGCGACCCCACCTCCGCCGCGTCGGAGGGATACGGCAGCCGCATGCTGGAGAAGGACGACACCATTTTGGACTGGAGAGACTACTTCGACCACCACACGCTCCCCCTCACGCGCCGGGACCCCACGCGATGGCCGGATTTCCCGCCGGAATATCGGCGGGTGGTTGCGGAGTACAGCGATAAAATCGCGGCGCTGGCGAGGGAGCTGCTGGGGCTGATCGCCGAGAGCCTAGGGCTTAAAACGCAGCGTTTAGAGGAGGCGGTTGGGGAGTTTTACCAGAACATAACGATTAGTTATTACCCGCCATGTCCTCAGCCGGAGCTGACATTGGGCCTTCAGGCCCATTCGGACTTTGGGGCCATTACGTTGCTGGTCCAAGACGAGGTTGGTGGGCTTGAGGTGCTCAAAGACAATGAGTGGGTGCCTGTGACGCCTTTGGGTGGTGATGCCATTGTTGTTCTTCTTGCTGACCAAACTGAGATCATGACCAATGGGAAGTACAAGAGTTCTGTACATAGAGCTATAACCAACTCCAATCGCCCGCGGCTCTCAGTGGCTACATTTCATGATCCGGCCAAAACAGTGAAAGTATCCCCTGCTTCAGAGCTCATCAGTCAATCCACTCCTCCCCTCTACCGGGAAGTTGTTTACGGAGATTATGTGTCGTCATGGTACACAAAGGGTCCAGAAGGAAAACGGAATATCGATGCCCTCTTGCTTGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

349

Amino Acids

38.75

Weight (kDa)

5.51

Isoelectric Point (pI)

46.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 42 - 153 2.6e-21 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 202 - 298 9e-30 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 296
AccB1I GGYRCC 2 cut(s) 209, 742
AccB7I CCANNNNNTGG 2 cut(s) 37, 450
AccII CGCG 8 cut(s) 165, 201, 267, 341, 433, 448, 509, 865
AclWI GGATC 1 cut(s) 884
AcoI YGGCCR 2 cut(s) 452, 894
AcuI CTGAAG 2 cut(s) 641, 906
AcyI GRCGYC 2 cut(s) 210, 752
AfaI GTAC 4 cut(s) 494, 821, 834, 995
AfiI CCNNNNNNNGG 9 cut(s) 37, 205, 301, 367, 450, 703, 761, 957, 958
AgsI TTSAA 3 cut(s) 80, 286, 1043
AjiI CACGTC 1 cut(s) 220
AjnI CCWGG 2 cut(s) 36, 300
AluBI AGCT 5 cut(s) 310, 526, 643, 842, 928
AluI AGCT 5 cut(s) 310, 526, 643, 842, 928
Alw21I GWGCWC 2 cut(s) 726, 930
Alw26I GTCTC 2 cut(s) 56, 393
AlwI GGATC 1 cut(s) 884
AoxI GGCC 7 cut(s) 39, 271, 452, 652, 660, 678, 894
ApeKI GCWGC 3 cut(s) 357, 526, 565
AspA2I CCTAGG 1 cut(s) 550
AspLEI GCGC 4 cut(s) 212, 267, 435, 514
AspS9I GGNCC 8 cut(s) 40, 271, 439, 652, 661, 678, 694, 1004
AsuC2I CCSGG 2 cut(s) 437, 959
AsuHPI GGTGA 5 cut(s) 46, 127, 214, 268, 776
AvaII GGWCC 3 cut(s) 439, 694, 1004
AvrII CCTAGG 1 cut(s) 550
BanI GGYRCC 2 cut(s) 209, 742
BanII GRGCYC 2 cut(s) 21, 930
Bbv12I GWGCWC 2 cut(s) 726, 930
BbvCI CCTCAGC 1 cut(s) 633
BbvI GCAGC 3 cut(s) 369, 513, 577
BccI CCATC 1 cut(s) 444
BceAI ACGGC 3 cut(s) 107, 247, 370
BcgI CGANNNNNNTGC 2 cut(s) 508, 542
BciT130I CCWGG 2 cut(s) 38, 302
BciVI GTATCC 2 cut(s) 344, 922
BcnI CCSGG 2 cut(s) 437, 959
BcoDI GTCTC 2 cut(s) 56, 393
BfaI CTAG 1 cut(s) 551
BfoI RGCGCY 2 cut(s) 213, 515
BfuI GTATCC 2 cut(s) 344, 922
BisI GCNGC 9 cut(s) 163, 199, 339, 358, 361, 510, 527, 566, 866
BlnI CCTAGG 1 cut(s) 550
BlsI GCNGC 9 cut(s) 164, 200, 340, 359, 362, 511, 528, 567, 867
Bme1390I CCNGG 4 cut(s) 38, 302, 437, 959
Bme18I GGWCC 3 cut(s) 439, 694, 1004
BmgBI CACGTC 1 cut(s) 220
BmgT120I GGNCC 8 cut(s) 40, 271, 439, 652, 661, 678, 694, 1004
BmiI GGNNCC 7 cut(s) 18, 211, 440, 441, 679, 744, 1005
BmrFI CCNGG 4 cut(s) 38, 302, 437, 959
BmrI ACTGGG 1 cut(s) 214
BmsI GCATC 4 cut(s) 141, 243, 757, 1018
BmuI ACTGGG 1 cut(s) 214
BpmI CTGGAG 2 cut(s) 389, 415
Bpu10I CCTNAGC 1 cut(s) 633
BpuEI CTTGAG 1 cut(s) 737
BpuMI CCSGG 2 cut(s) 437, 959
Bsa29I ATCGAT 1 cut(s) 1026
BsaHI GRCGYC 2 cut(s) 210, 752
BsaI GGTCTC 1 cut(s) 56
BsaJI CCNNGG 4 cut(s) 36, 229, 550, 863
BsaXI ACNNNNNCTCC 5 cut(s) 26, 317, 347, 966, 996
Bsc4I CCNNNNNNNGG 9 cut(s) 37, 205, 301, 367, 450, 703, 761, 957, 958
Bse1I ACTGG 2 cut(s) 209, 398
BseBI CCWGG 2 cut(s) 38, 302
BseCI ATCGAT 1 cut(s) 1026
BseDI CCNNGG 4 cut(s) 36, 229, 550, 863
BseGI GGATG 2 cut(s) 110, 234
BseLI CCNNNNNNNGG 9 cut(s) 37, 205, 301, 367, 450, 703, 761, 957, 958
BseMII CTCAG 3 cut(s) 647, 789, 885
BseNI ACTGG 2 cut(s) 209, 398
BseRI GAGGAG 4 cut(s) 106, 239, 590, 936
BseXI GCAGC 3 cut(s) 369, 513, 577
BseYI CCCAGC 1 cut(s) 529
Bsh1236I CGCG 8 cut(s) 165, 201, 267, 341, 433, 448, 509, 865
Bsh1285I CGRYCG 1 cut(s) 186
BshFI GGCC 7 cut(s) 41, 273, 454, 654, 662, 680, 896
BshNI GGYRCC 2 cut(s) 209, 742
BshVI ATCGAT 1 cut(s) 1026
BsiEI CGRYCG 1 cut(s) 186
BsiHKAI GWGCWC 2 cut(s) 726, 930
BsiSI CCGG 6 cut(s) 436, 455, 467, 638, 893, 958
BslFI GGGAC 2 cut(s) 110, 452
BslI CCNNNNNNNGG 9 cut(s) 37, 205, 301, 367, 450, 703, 761, 957, 958
BsmAI GTCTC 2 cut(s) 56, 393
BsmFI GGGAC 2 cut(s) 110, 452
BsnI GGCC 7 cut(s) 41, 273, 454, 654, 662, 680, 896
Bso31I GGTCTC 1 cut(s) 56
Bsp1286I GDGCHC 3 cut(s) 21, 726, 930
Bsp1407I TGTACA 1 cut(s) 832
Bsp143I GATC 4 cut(s) 183, 537, 801, 889
BspANI GGCC 7 cut(s) 41, 273, 454, 654, 662, 680, 896
BspCNI CTCAG 3 cut(s) 646, 790, 884
BspDI ATCGAT 1 cut(s) 1026
BspFNI CGCG 8 cut(s) 165, 201, 267, 341, 433, 448, 509, 865
BspHI TCATGA 2 cut(s) 804, 886
BspLI GGNNCC 7 cut(s) 18, 211, 440, 441, 679, 744, 1005
BspPI GGATC 1 cut(s) 884
BspT107I GGYRCC 2 cut(s) 209, 742
BspTNI GGTCTC 1 cut(s) 56
BsrGI TGTACA 1 cut(s) 832
BsrI ACTGG 2 cut(s) 209, 398
BssECI CCNNGG 4 cut(s) 36, 229, 550, 863
BssMI GATC 4 cut(s) 183, 537, 801, 889
BssNI GRCGYC 2 cut(s) 210, 752
BssT1I CCWWGG 1 cut(s) 550
Bst2UI CCWGG 2 cut(s) 38, 302
Bst4CI ACNGT 2 cut(s) 172, 904
Bst6I CTCTTC 1 cut(s) 146
BstACI GRCGYC 2 cut(s) 210, 752
BstAUI TGTACA 1 cut(s) 832
BstC8I GCNNGC 5 cut(s) 196, 322, 365, 516, 863
BstDEI CTNAG 3 cut(s) 633, 798, 871
BstDSI CCRYGG 2 cut(s) 229, 863
BstF5I GGATG 2 cut(s) 110, 234
BstFNI CGCG 8 cut(s) 165, 201, 267, 341, 433, 448, 509, 865
BstH2I RGCGCY 2 cut(s) 213, 515
BstHHI GCGC 4 cut(s) 212, 267, 435, 514
BstKTI GATC 4 cut(s) 186, 540, 804, 892
BstMAI GTCTC 2 cut(s) 56, 393
BstMBI GATC 4 cut(s) 183, 537, 801, 889
BstMCI CGRYCG 1 cut(s) 186
BstMWI GCNNNNNNNGC 7 cut(s) 207, 321, 515, 532, 562, 721, 751
BstNI CCWGG 2 cut(s) 38, 302
BstNSI RCATGY 1 cut(s) 367
BstSCI CCNGG 4 cut(s) 36, 300, 435, 957
BstUI CGCG 8 cut(s) 165, 201, 267, 341, 433, 448, 509, 865
BstV1I GCAGC 3 cut(s) 369, 513, 577
Bsu15I ATCGAT 1 cut(s) 1026
BsuI GTATCC 2 cut(s) 344, 922
BsuRI GGCC 7 cut(s) 41, 273, 454, 654, 662, 680, 896
BsuTUI ATCGAT 1 cut(s) 1026
BtgI CCRYGG 2 cut(s) 229, 863
BtgZI GCGATG 1 cut(s) 463
BtrI CACGTC 1 cut(s) 220
BtsCI GGATG 2 cut(s) 110, 234
BtsIMutI CAGTG 2 cut(s) 879, 909
Cac8I GCNNGC 5 cut(s) 196, 322, 365, 516, 863
CciI TCATGA 2 cut(s) 804, 886
CfoI GCGC 4 cut(s) 212, 267, 435, 514
Cfr13I GGNCC 8 cut(s) 40, 271, 439, 652, 661, 678, 694, 1004
Cfr42I CCGCGG 1 cut(s) 866
ClaI ATCGAT 1 cut(s) 1026
CseI GACGC 2 cut(s) 330, 760
Csp6I GTAC 4 cut(s) 493, 820, 833, 994
CviAII CATG 5 cut(s) 364, 627, 805, 887, 990
CviQI GTAC 4 cut(s) 493, 820, 833, 994
DdeI CTNAG 3 cut(s) 633, 798, 871
DinI GGCGCC 1 cut(s) 211
DpnI GATC 4 cut(s) 185, 539, 803, 891
DpnII GATC 4 cut(s) 183, 537, 801, 889
DrdI GACNNNNNNGTC 1 cut(s) 296
DseDI GACNNNNNNGTC 1 cut(s) 296
EaeI YGGCCR 2 cut(s) 452, 894
Eam1104I CTCTTC 1 cut(s) 146
EarI CTCTTC 1 cut(s) 146
EciI GGCGGA 2 cut(s) 109, 325
Ecl136II GAGCTC 1 cut(s) 928
Eco130I CCWWGG 1 cut(s) 550
Eco24I GRGCYC 2 cut(s) 21, 930
Eco31I GGTCTC 1 cut(s) 56
Eco47I GGWCC 3 cut(s) 439, 694, 1004
Eco53kI GAGCTC 1 cut(s) 928
Eco57I CTGAAG 2 cut(s) 641, 906
EcoICRI GAGCTC 1 cut(s) 928
EcoO109I RGGNCCY 1 cut(s) 439
EcoRII CCWGG 2 cut(s) 36, 300
EcoT14I CCWWGG 1 cut(s) 550
EcoT38I GRGCYC 2 cut(s) 21, 930
EgeI GGCGCC 1 cut(s) 211
EheI GGCGCC 1 cut(s) 211
ErhI CCWWGG 1 cut(s) 550
FaeI CATG 5 cut(s) 367, 630, 808, 890, 993
FaiI YATR 9 cut(s) 365, 605, 628, 806, 837, 845, 888, 981, 991
FaqI GGGAC 2 cut(s) 110, 452
FatI CATG 5 cut(s) 363, 626, 804, 886, 989
FauI CCCGC 7 cut(s) 40, 167, 247, 471, 471, 630, 870
Fnu4HI GCNGC 9 cut(s) 163, 199, 339, 358, 361, 510, 527, 566, 866
FokI GGATG 2 cut(s) 97, 221
FriOI GRGCYC 2 cut(s) 21, 930
Fsp4HI GCNGC 9 cut(s) 163, 199, 339, 358, 361, 510, 527, 566, 866
FspBI CTAG 1 cut(s) 551
GlaI GCGC 4 cut(s) 211, 266, 434, 513
GluI GCNGC 9 cut(s) 163, 199, 339, 358, 361, 510, 527, 566, 866
GsaI CCCAGC 1 cut(s) 533
GsuI CTGGAG 2 cut(s) 389, 415
HaeII RGCGCY 2 cut(s) 213, 515
HaeIII GGCC 7 cut(s) 41, 273, 454, 654, 662, 680, 896
HapII CCGG 6 cut(s) 436, 455, 467, 638, 893, 958
HgaI GACGC 2 cut(s) 330, 760
HhaI GCGC 4 cut(s) 212, 267, 435, 514
Hin1I GRCGYC 2 cut(s) 210, 752
Hin1II CATG 5 cut(s) 367, 630, 808, 890, 993
Hin6I GCGC 4 cut(s) 210, 265, 433, 512
HinP1I GCGC 4 cut(s) 210, 265, 433, 512
HinfI GANTC 3 cut(s) 27, 147, 290
HpaII CCGG 6 cut(s) 436, 455, 467, 638, 893, 958
HphI GGTGA 5 cut(s) 46, 127, 214, 268, 776
Hpy166II GTNNAC 2 cut(s) 970, 996
Hpy188I TCNGA 6 cut(s) 16, 146, 176, 346, 670, 925
Hpy188III TCNNGA 3 cut(s) 805, 887, 1007
Hpy8I GTNNAC 2 cut(s) 970, 996
Hpy99I CGWCG 2 cut(s) 16, 346
HpyAV CCTTC 7 cut(s) 93, 117, 223, 289, 367, 665, 1004
HpyCH4III ACNGT 2 cut(s) 172, 904
HpyCH4IV ACGT 2 cut(s) 219, 686
HpyCH4V TGCA 1 cut(s) 132
HpyF10VI GCNNNNNNNGC 7 cut(s) 207, 321, 515, 532, 562, 721, 751
HpyF3I CTNAG 3 cut(s) 633, 798, 871
HpySE526I ACGT 2 cut(s) 219, 686
Hsp92I GRCGYC 2 cut(s) 210, 752
Hsp92II CATG 5 cut(s) 367, 630, 808, 890, 993
HspAI GCGC 4 cut(s) 210, 265, 433, 512
KasI GGCGCC 1 cut(s) 209
KflI GGGWCCC 1 cut(s) 439
KspI CCGCGG 1 cut(s) 866
Kzo9I GATC 4 cut(s) 183, 537, 801, 889
LmnI GCTCC 5 cut(s) 16, 315, 426, 523, 640
Lsp1109I GCAGC 3 cut(s) 369, 513, 577
LweI GCATC 4 cut(s) 141, 243, 757, 1018
MaeI CTAG 1 cut(s) 551
MaeII ACGT 2 cut(s) 219, 686
MaeIII GTNAC 2 cut(s) 220, 748
MalI GATC 4 cut(s) 185, 539, 803, 891
MboI GATC 4 cut(s) 183, 537, 801, 889
MboII GAAGA 3 cut(s) 133, 274, 773
MhlI GDGCHC 3 cut(s) 21, 726, 930
Mly113I GGCGCC 1 cut(s) 210
MlyI GAGTC 3 cut(s) 36, 141, 284
MmeI TCCRAC 1 cut(s) 324
MseI TTAA 1 cut(s) 558
MspA1I CMGCKG 1 cut(s) 865
MspI CCGG 6 cut(s) 436, 455, 467, 638, 893, 958
MspR9I CCNGG 4 cut(s) 38, 302, 437, 959
MvaI CCWGG 2 cut(s) 38, 302
MvnI CGCG 8 cut(s) 165, 201, 267, 341, 433, 448, 509, 865
MwoI GCNNNNNNNGC 7 cut(s) 207, 321, 515, 532, 562, 721, 751
NarI GGCGCC 1 cut(s) 210
NciI CCSGG 2 cut(s) 437, 959
NdeII GATC 4 cut(s) 183, 537, 801, 889
NlaIII CATG 5 cut(s) 367, 630, 808, 890, 993
NlaIV GGNNCC 7 cut(s) 18, 211, 440, 441, 679, 744, 1005
NmeAIII GCCGAG 1 cut(s) 568
NmuCI GTSAC 2 cut(s) 220, 748
NspI RCATGY 1 cut(s) 367
PaeI GCATGC 1 cut(s) 367
PagI TCATGA 2 cut(s) 804, 886
PcsI WCGNNNNNNNCGW 1 cut(s) 294
PflFI GACNNNGTC 1 cut(s) 170
PflMI CCANNNNNTGG 2 cut(s) 37, 450
PfoI TCCNGGA 1 cut(s) 300
PkrI GCNGC 9 cut(s) 164, 200, 340, 359, 362, 511, 528, 567, 867
Ple19I CGATCG 1 cut(s) 186
PleI GAGTC 3 cut(s) 35, 141, 284
PluTI GGCGCC 1 cut(s) 213
PpsI GAGTC 3 cut(s) 35, 141, 284
PpuMI RGGWCCY 1 cut(s) 439
Psp124BI GAGCTC 1 cut(s) 930
Psp5II RGGWCCY 1 cut(s) 439
Psp6I CCWGG 2 cut(s) 36, 300
PspFI CCCAGC 1 cut(s) 529
PspGI CCWGG 2 cut(s) 36, 300
PspN4I GGNNCC 7 cut(s) 18, 211, 440, 441, 679, 744, 1005
PspPI GGNCC 8 cut(s) 40, 271, 439, 652, 661, 678, 694, 1004
PspPPI RGGWCCY 1 cut(s) 439
PsyI GACNNNGTC 1 cut(s) 170
PvuI CGATCG 1 cut(s) 186
RsaI GTAC 4 cut(s) 494, 821, 834, 995
RsaNI GTAC 4 cut(s) 493, 820, 833, 994
SacI GAGCTC 1 cut(s) 930
SacII CCGCGG 1 cut(s) 866
SaqAI TTAA 1 cut(s) 558
SatI GCNGC 9 cut(s) 163, 199, 339, 358, 361, 510, 527, 566, 866
Sau3AI GATC 4 cut(s) 183, 537, 801, 889
Sau96I GGNCC 8 cut(s) 40, 271, 439, 652, 661, 678, 694, 1004
SchI GAGTC 3 cut(s) 36, 141, 284
ScrFI CCNGG 4 cut(s) 38, 302, 437, 959
SduI GDGCHC 3 cut(s) 21, 726, 930
SfaNI GCATC 4 cut(s) 141, 243, 757, 1018
SfoI GGCGCC 1 cut(s) 211
Sfr303I CCGCGG 1 cut(s) 866
SgrBI CCGCGG 1 cut(s) 866
SinI GGWCC 3 cut(s) 439, 694, 1004
SmlI CTYRAG 1 cut(s) 716
SmoI CTYRAG 1 cut(s) 716
SphI GCATGC 1 cut(s) 367
SspDI GGCGCC 1 cut(s) 209
SspMI CTAG 1 cut(s) 551
SstI GAGCTC 1 cut(s) 930
StyD4I CCNGG 4 cut(s) 36, 300, 435, 957
StyI CCWWGG 1 cut(s) 550
TaaI ACNGT 2 cut(s) 172, 904
TaiI ACGT 2 cut(s) 222, 689
TaqI TCGA 4 cut(s) 150, 182, 408, 1026
TatI WGTACW 3 cut(s) 492, 819, 832
TauI GCSGC 6 cut(s) 165, 201, 341, 363, 512, 868
Tru1I TTAA 1 cut(s) 558
Tru9I TTAA 1 cut(s) 558
TscAI CASTG 2 cut(s) 879, 909
TseFI GTSAC 2 cut(s) 220, 748
TseI GCWGC 3 cut(s) 357, 526, 565
Tsp45I GTSAC 2 cut(s) 220, 748
TspDTI ATGAA 2 cut(s) 99, 875
TspGWI ACGGA 2 cut(s) 987, 1033
TspRI CASTG 2 cut(s) 879, 909
Tth111I GACNNNGTC 1 cut(s) 170
Van91I CCANNNNNTGG 2 cut(s) 37, 450
VpaK11BI GGWCC 3 cut(s) 439, 694, 1004
XceI RCATGY 1 cut(s) 367
XcmI CCANNNNNNNNNTGG 3 cut(s) 671, 688, 704
XmaJI CCTAGG 1 cut(s) 550
XspI CTAG 1 cut(s) 551
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.