Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0010360

Physical Location & Seq

Genomic Coordinates Forward (+)

31382915 .. 31389558

Gene Structure 6644 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g39760.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2493 bp

ATGGAGAGATCTGGTAGCGGCGGCGGCGCGGATTTCCGGGACTTGCTTCGGAGCTCCTCAGAGAATAATGCACTCTTTGATGCATCACAGTATGAGTTTTTCGGCCAAAACGTGGCGGAAGAAGTTGAGTTGGGGGGTTTAGACGATGAGAACGACAGAAAATCGTTATTTGGGTCCGTTGATAATGAGTACCATTTATTCGAAAAGGATGAGGGCCTAGGGTTGGGATCTTTATCTGATGTGGATGATCTGGCGACTACTTTTGCAAAGTTGAACAAAGTTGTAACTGGACCTAGACACCCGGGCGTTATTGGAGATAGAGGTTCTGGATCATTTTCACGGGAAAGTTCATCTGCTACTGACTGGGCCCAAGATGGAGATTTCGGTAGCTGGTTGGACCAGCAGATGTTTGATACAGATAATTCTCTGGACGGAAAAAGATGGTCATCACAGCCACAATCTTCCGCTCGATTTCCAGAATCAAAACCTTTGCACAGAACATCCTCATACCCTGAGCAGCCCCCTCCTGTCCTACAGCACTACAACAGTGAACCAATTATAGTTCCCAAATCAGCTTTCACATCATTCCCTCCCCCTGGAAATAGGTCCCAGGGGGGATCACCACAGCATCTGAGTCTTTCTACTCTATCTGGTGCTTCCCAGTCGCCTTTTTCTTCACCAAGTCTTTCTTTATCTAACTCTAATCTTCATCTGGCTGGTGGTTTACCTCATGGGTTGCATTATGGAGCGAACATGCCTCAGTTCACAAACCCTGCCCTTTCTTTCAATAGCAGGTCACAAAATAATTGGGTCAACCATGCTGGAGTATTGCATGGGGATCATTCCAACCTCTTGAACAATATATTGCAGCAACAGCTACCTCATCAAAATGGACTTTTGTCCGCACAGTTACTATCAGCTCAGCAGCAGCTACAACAGCAGAGATTGCACCGACCGGTCCCGCCATCTTTGGCCCATTTTGCAGCAATGCAGTCTCAACTATATAATACCCATCCTTCGCCCTCACACAAGCCAATGCACGGATTGCCTGACATAAGAGAGCATAGACCTAAACATAGAGGTAAACACAATCGGTTTTCTCAAGGCTCTGATACTGGTAGTCAGAAAAGTGAGAGTGGGTTTATCCAGTTCAGGTCTAAGCATATGACATCCGAAGAGATAGAGAGTATTCTTAAAATGCAACATGCTGCAACACATAGCAACGACCCCTACATAGATGATTATTACCACCAGGCAAGTCTTTCCAAGAAAGCTGCTGGGTCGAGGTCAAAAAACTCTTTCTGCCCATCTCATCTGAGGGAGTTCTCTTCCAGAGGTCGTAATAGTAGTGATCAGCATTCTCATTCTTCTGTTGATTCTCTTGGGAGGATTCCTCTCTCATCCATCCGTAGGCCACGTCCTCTCCTTGAAGTTGATCCCCCTCCTGGTGAAGGCAATTCTGAACATGCCTCTGAGAAGCCTTTGGAACAGGAACCAATGCTTGCTGCTAGGATAACCATTGAAGATGGCCTTTGTCTCCTTCTTGATGTTGATGATATTGATCGACTTATACAATGCGGTCAGCCCCAAGACGGTGGAGTTCAACTTCGGCGAAGGCGGCAAATGCTGCTGGAAGGGTTGGCGGCGTCACTTCAGCTTGTAGATCCACTTGGGAAAGGCAGTCATGCAGTTGGGTTGTCCCCAAAGGATGACCTTGTGTTCCTAAGGTTGGTTGCTCTTCCTAAAGGCCGAAAGCTCCTTACTAGGTTTATCCAGCTTCTTTTCCATGGTAGTGAGCTTGCCCGAATTGTCTGCATGACTGTATTCCGGCACTTAAGATTTTTGTTTGGAGGTCTTCCATCTGATCCTGCAGCTGCTGATACAACTACCAGTCTTGCAAAAACGGTTTCTGCATGTATAAGTGGTATGGATCTTCGTGCTCTAAGTGCCTGCCTTGTTGCAGTCGTTTGTTCATCAGAGCAGCCACCTCTTCGTCCCCTTGGAAGCCCTGCTGGAGATGGGGCCACTATTATATTGAAATCTGTTCTTGAAAGGGCAACTGTACTCTTAACTGATCCTCATGCTGTTGGAAACTGTAGTGTTTCTAATCGTGCCCTCTGGCAGGCTTCCTTCGATGAATTCTTTGGTCTTCTTACCAAATATTGTTTGAGTAAATATGAAACTATCCTGCAGTCAATATTTACGCAGACCCAGCAAAGTTCAGAAGTTATTGGTTCAGAGGCCACCAAGGCAATACACCGGGAAATGCCTGTGGAGCTTCTACGTGCCAGTCTTCCTCACACTAATGAGAACCAACGCAAGCTTTTGTCAGATTTTGCTCATCGTTCCATGCCCATTTCTGGTCTTAATGCTCATGGTGGCAGTGGGGGTCAAATGAACTCTGAATCAGGTAATGTGAGTCTGCTTAAAGTGGAAGGGGTGTGCAACTTGGGGAGTGAAAGGATACTGCTCCCAATCGAAGTAATTTTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000288 GO:0000290 GO:0000932 GO:0000956 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0012505 GO:0016043 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0019827 GO:0022607 GO:0022613 GO:0022618 GO:0032501 GO:0032502 GO:0032991 GO:0033962 GO:0034622 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0060255 GO:0065003 GO:0065007 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097159 GO:0098727 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

No domains found.

Protein Analysis

831

Amino Acids

90.52

Weight (kDa)

6.42

Isoelectric Point (pI)

57.55

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010360)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22270 AT4G14990 AT4G14990
fragaria_vesca	FvH4_6g39760 FvH4_6g39760
malus_domestica	MD09G1137000.v1.1 MD17G1127200.v1.1
prunus_persica	Prupe.3G188000_v2.0.a1
pyrus_communis	pycom09g05810 pycom17g11950
rosa_chinensis	RchiOBHm_Chr2g0153871
rosa_laevigata	RLG00000020735
rosa_multiflora	Rmu_sc0003887.1_g000011
rosa_roxburghii	Rroxscaffold_2G00094690
rosa_rugosa	Rorug02G0442800 Rorug02G0442900
rosa_samantha	Rh2AG506600 Rh2BG516600 Rh2CG492300 Rh2DG528700
rosa_wichuraiana	Rw2G041580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2491
Acc36I	ACCTGC	1 cut(s)	783
AccB7I	CCANNNNNTGG	1 cut(s)	112
AccBSI	CCGCTC	1 cut(s)	467
AccII	CGCG	1 cut(s)	29
AclWI	GGATC	9 cut(s)	235, 337, 625, 846, 1430, 1658, 1859, 1938, 2069
AcoI	YGGCCR	1 cut(s)	103
AcsI	RAATTY	1 cut(s)	2138
AcuI	CTGAAG	1 cut(s)	1637
AcyI	GRCGYC	1 cut(s)	1646
AfaI	GTAC	2 cut(s)	191, 2064
AflII	CTTAAG	1 cut(s)	1834
AgeI	ACCGGT	1 cut(s)	955
AgsI	TTSAA	8 cut(s)	274, 787, 856, 1430, 1523, 1604, 2038, 2051
AjiI	CACGTC	1 cut(s)	1418
AjnI	CCWGG	4 cut(s)	595, 609, 1251, 1444
AjuI	GAANNNNNNNTTGG	2 cut(s)	560, 592
Alw21I	GWGCWC	2 cut(s)	56, 1942
Alw26I	GTCTC	2 cut(s)	999, 1541
AlwI	GGATC	9 cut(s)	235, 337, 625, 846, 1430, 1658, 1859, 1938, 2069
AlwNI	CAGNNNCTG	2 cut(s)	631, 1877
Ama87I	CYCGRG	1 cut(s)	301
AoxI	GGCC	9 cut(s)	103, 214, 366, 972, 1412, 1528, 1747, 2022, 2241
ApaI	GGGCCC	1 cut(s)	370
ApoI	RAATTY	1 cut(s)	2138
AsiGI	ACCGGT	1 cut(s)	955
AspA2I	CCTAGG	1 cut(s)	217
AspLEI	GCGC	1 cut(s)	29
AsuC2I	CCSGG	4 cut(s)	38, 302, 303, 2261
AsuHPI	GGTGA	3 cut(s)	612, 669, 1460
AsuII	TTCGAA	1 cut(s)	201
AvaI	CYCGRG	1 cut(s)	301
AvaII	GGWCC	5 cut(s)	174, 290, 397, 606, 958
AvrII	CCTAGG	1 cut(s)	217
AxyI	CCTNAGG	1 cut(s)	1724
BaeGI	GKGCMC	2 cut(s)	370, 2116
BanII	GRGCYC	2 cut(s)	56, 370
BbsI	GAAGAC	3 cut(s)	1847, 2141, 2285
Bbv12I	GWGCWC	2 cut(s)	56, 1942
BccI	CCATC	9 cut(s)	368, 435, 973, 1020, 1315, 1412, 1520, 1867, 2012
BcgI	CGANNNNNNTGC	2 cut(s)	1794, 1828
BciT130I	CCWGG	4 cut(s)	597, 611, 1253, 1446
BciVI	GTATCC	1 cut(s)	2457
BclI	TGATCA	1 cut(s)	1351
BcnI	CCSGG	4 cut(s)	38, 302, 303, 2261
BcoDI	GTCTC	2 cut(s)	999, 1541
BfaI	CTAG	4 cut(s)	218, 294, 1509, 1764
BfmI	CTRYAG	4 cut(s)	533, 1869, 2095, 2189
BfrI	CTTAAG	1 cut(s)	1834
BfuAI	ACCTGC	1 cut(s)	783
BfuI	GTATCC	1 cut(s)	2457
BglI	GCCNNNNNGGC	1 cut(s)	2249
BglII	AGATCT	1 cut(s)	8
BlnI	CCTAGG	1 cut(s)	217
BlpI	GCTNAGC	1 cut(s)	921
Bme1390I	CCNGG	8 cut(s)	38, 302, 303, 597, 611, 1253, 1446, 2261
Bme18I	GGWCC	5 cut(s)	174, 290, 397, 606, 958
BmeT110I	CYCGRG	1 cut(s)	301
BmgBI	CACGTC	1 cut(s)	1418
BmiI	GGNNCC	6 cut(s)	175, 368, 608, 960, 1494, 2023
BmrFI	CCNGG	8 cut(s)	38, 302, 303, 597, 611, 1253, 1446, 2261
BmrI	ACTGGG	2 cut(s)	373, 655
BmsI	GCATC	3 cut(s)	70, 92, 637
BmuI	ACTGGG	2 cut(s)	373, 655
BoxI	GACNNNNGTC	1 cut(s)	898
BpiI	GAAGAC	3 cut(s)	1847, 2141, 2285
BplI	GAGNNNNNCTC	2 cut(s)	1378, 1410
BpmI	CTGGAG	2 cut(s)	843, 2034
Bpu10I	CCTNAGC	1 cut(s)	513
Bpu1102I	GCTNAGC	1 cut(s)	921
Bpu14I	TTCGAA	1 cut(s)	201
BpuEI	CTTGAG	1 cut(s)	1086
BpuMI	CCSGG	4 cut(s)	38, 302, 303, 2261
BsaAI	YACGTR	1 cut(s)	2285
BsaBI	GATNNNNATC	3 cut(s)	232, 445, 1560
BsaHI	GRCGYC	1 cut(s)	1646
BsaJI	CCNNGG	8 cut(s)	217, 301, 595, 609, 610, 1786, 1999, 2247
BsaWI	WCCGGW	1 cut(s)	955
BsaXI	ACNNNNNCTCC	2 cut(s)	1407, 1437
Bse118I	RCCGGY	1 cut(s)	955
Bse1I	ACTGG	7 cut(s)	292, 368, 661, 1120, 1147, 1890, 2289
Bse21I	CCTNAGG	1 cut(s)	1724
Bse3DI	GCAATG	1 cut(s)	993
Bse8I	GATNNNNATC	3 cut(s)	232, 445, 1560
BseBI	CCWGG	4 cut(s)	597, 611, 1253, 1446
BseDI	CCNNGG	8 cut(s)	217, 301, 595, 609, 610, 1786, 1999, 2247
BseGI	GGATG	8 cut(s)	214, 250, 500, 1012, 1169, 1400, 1404, 1714
BseJI	GATNNNNATC	3 cut(s)	232, 445, 1560
BseMI	GCAATG	1 cut(s)	993
BseMII	CTCAG	7 cut(s)	72, 504, 623, 773, 935, 1307, 1464
BseNI	ACTGG	7 cut(s)	292, 368, 661, 1120, 1147, 1890, 2289
BseRI	GAGGAG	1 cut(s)	46
BseSI	GKGCMC	2 cut(s)	370, 2116
BseYI	CCCAGC	2 cut(s)	1277, 2211
Bsh1236I	CGCG	1 cut(s)	29
Bsh1285I	CGRYCG	1 cut(s)	956
BshFI	GGCC	9 cut(s)	105, 216, 368, 974, 1414, 1530, 1749, 2024, 2243
BshTI	ACCGGT	1 cut(s)	955
BsiEI	CGRYCG	1 cut(s)	956
BsiHKAI	GWGCWC	2 cut(s)	56, 1942
BsiHKCI	CYCGRG	1 cut(s)	301
BsiSI	CCGG	5 cut(s)	37, 302, 956, 1828, 2260
BslFI	GGGAC	5 cut(s)	53, 592, 944, 1684, 1980
BsmAI	GTCTC	2 cut(s)	999, 1541
BsmFI	GGGAC	5 cut(s)	53, 592, 944, 1684, 1980
BsmI	GAATGC	1 cut(s)	1357
BsnI	GGCC	9 cut(s)	105, 216, 368, 974, 1414, 1530, 1749, 2024, 2243
BsoBI	CYCGRG	1 cut(s)	301
Bsp119I	TTCGAA	1 cut(s)	201
Bsp120I	GGGCCC	1 cut(s)	366
Bsp1286I	GDGCHC	4 cut(s)	56, 370, 1942, 2116
Bsp1720I	GCTNAGC	1 cut(s)	921
Bsp19I	CCATGG	1 cut(s)	1786
BspANI	GGCC	9 cut(s)	105, 216, 368, 974, 1414, 1530, 1749, 2024, 2243
BspCNI	CTCAG	7 cut(s)	71, 505, 624, 772, 934, 1308, 1465
BspFNI	CGCG	1 cut(s)	29
BspLI	GGNNCC	6 cut(s)	175, 368, 608, 960, 1494, 2023
BspMAI	CTGCAG	2 cut(s)	1873, 2193
BspMI	ACCTGC	1 cut(s)	783
BspPI	GGATC	9 cut(s)	235, 337, 625, 846, 1430, 1658, 1859, 1938, 2069
BspQI	GCTCTTC	1 cut(s)	1743
BspT104I	TTCGAA	1 cut(s)	201
BspTI	CTTAAG	1 cut(s)	1834
BsrBI	CCGCTC	1 cut(s)	467
BsrDI	GCAATG	1 cut(s)	993
BsrFI	RCCGGY	1 cut(s)	955
BsrI	ACTGG	7 cut(s)	292, 368, 661, 1120, 1147, 1890, 2289
BssAI	RCCGGY	1 cut(s)	955
BssECI	CCNNGG	8 cut(s)	217, 301, 595, 609, 610, 1786, 1999, 2247
BssNI	GRCGYC	1 cut(s)	1646
BssT1I	CCWWGG	4 cut(s)	217, 1786, 1999, 2247
Bst2UI	CCWGG	4 cut(s)	597, 611, 1253, 1446
Bst4CI	ACNGT	8 cut(s)	90, 548, 909, 1595, 1822, 1906, 2062, 2096
Bst6I	CTCTTC	4 cut(s)	1170, 1333, 1743, 1995
BstACI	GRCGYC	1 cut(s)	1646
BstAFI	CTTAAG	1 cut(s)	1834
BstAPI	GCANNNNNTGC	3 cut(s)	946, 1045, 1627
BstBAI	YACGTR	1 cut(s)	2285
BstBI	TTCGAA	1 cut(s)	201
BstC8I	GCNNGC	5 cut(s)	1503, 1800, 1951, 2124, 2321
BstDSI	CCRYGG	1 cut(s)	1786
BstENI	CCTNNNNNAGG	2 cut(s)	1449, 2120
BstF5I	GGATG	8 cut(s)	214, 250, 500, 1012, 1169, 1400, 1404, 1714
BstFNI	CGCG	1 cut(s)	29
BstHHI	GCGC	1 cut(s)	29
BstMAI	GTCTC	2 cut(s)	999, 1541
BstMCI	CGRYCG	1 cut(s)	956
BstNI	CCWGG	4 cut(s)	597, 611, 1253, 1446
BstNSI	RCATGY	4 cut(s)	757, 1208, 1469, 1917
BstPAI	GACNNNNGTC	1 cut(s)	898
BstSCI	CCNGG	8 cut(s)	36, 300, 301, 595, 609, 1251, 1444, 2259
BstSFI	CTRYAG	4 cut(s)	533, 1869, 2095, 2189
BstSLI	GKGCMC	2 cut(s)	370, 2116
BstUI	CGCG	1 cut(s)	29
BstV2I	GAAGAC	3 cut(s)	1847, 2141, 2285
BstX2I	RGATCY	4 cut(s)	8, 227, 1663, 1930
BstXI	CCANNNNNNTGG	1 cut(s)	1595
BstYI	RGATCY	4 cut(s)	8, 227, 1663, 1930
Bsu36I	CCTNAGG	1 cut(s)	1724
BsuI	GTATCC	1 cut(s)	2457
BsuRI	GGCC	9 cut(s)	105, 216, 368, 974, 1414, 1530, 1749, 2024, 2243
BtgI	CCRYGG	1 cut(s)	1786
BtrI	CACGTC	1 cut(s)	1418
BtsCI	GGATG	8 cut(s)	214, 250, 500, 1012, 1169, 1400, 1404, 1714
BtsI	GCAGTG	1 cut(s)	2389
BtsIMutI	CAGTG	2 cut(s)	553, 2389
BveI	ACCTGC	1 cut(s)	783
Cac8I	GCNNGC	5 cut(s)	1503, 1800, 1951, 2124, 2321
CaiI	CAGNNNCTG	2 cut(s)	631, 1877
CfoI	GCGC	1 cut(s)	29
Cfr10I	RCCGGY	1 cut(s)	955
Cfr9I	CCCGGG	1 cut(s)	301
CseI	GACGC	1 cut(s)	1635
Csp6I	GTAC	2 cut(s)	190, 2063
CspAI	ACCGGT	1 cut(s)	955
CviQI	GTAC	2 cut(s)	190, 2063
EaeI	YGGCCR	1 cut(s)	103
Eam1104I	CTCTTC	4 cut(s)	1170, 1333, 1743, 1995
EarI	CTCTTC	4 cut(s)	1170, 1333, 1743, 1995
EciI	GGCGGA	1 cut(s)	131
Ecl136II	GAGCTC	1 cut(s)	54
Eco130I	CCWWGG	4 cut(s)	217, 1786, 1999, 2247
Eco24I	GRGCYC	2 cut(s)	56, 370
Eco47I	GGWCC	5 cut(s)	174, 290, 397, 606, 958
Eco53kI	GAGCTC	1 cut(s)	54
Eco57I	CTGAAG	1 cut(s)	1637
Eco81I	CCTNAGG	1 cut(s)	1724
Eco88I	CYCGRG	1 cut(s)	301
EcoICRI	GAGCTC	1 cut(s)	54
EcoNI	CCTNNNNNAGG	2 cut(s)	1449, 2120
EcoO109I	RGGNCCY	2 cut(s)	214, 606
EcoRI	GAATTC	1 cut(s)	2138
EcoRII	CCWGG	4 cut(s)	595, 609, 1251, 1444
EcoT14I	CCWWGG	4 cut(s)	217, 1786, 1999, 2247
EcoT22I	ATGCAT	1 cut(s)	85
EcoT38I	GRGCYC	2 cut(s)	56, 370
ErhI	CCWWGG	4 cut(s)	217, 1786, 1999, 2247
FalI	AAGNNNNNCTT	4 cut(s)	673, 705, 1515, 1547
FaqI	GGGAC	5 cut(s)	53, 592, 944, 1684, 1980
FauI	CCCGC	1 cut(s)	969
FauNDI	CATATG	1 cut(s)	1164
FbaI	TGATCA	1 cut(s)	1351
FokI	GGATG	8 cut(s)	221, 257, 487, 999, 1156, 1387, 1391, 1721
FriOI	GRGCYC	2 cut(s)	56, 370
FspBI	CTAG	4 cut(s)	218, 294, 1509, 1764
GlaI	GCGC	1 cut(s)	28
GsaI	CCCAGC	2 cut(s)	1281, 2215
GsuI	CTGGAG	2 cut(s)	843, 2034
HaeIII	GGCC	9 cut(s)	105, 216, 368, 974, 1414, 1530, 1749, 2024, 2243
HapII	CCGG	5 cut(s)	37, 302, 956, 1828, 2260
HgaI	GACGC	1 cut(s)	1635
HhaI	GCGC	1 cut(s)	29
Hin1I	GRCGYC	1 cut(s)	1646
Hin6I	GCGC	1 cut(s)	27
HinP1I	GCGC	1 cut(s)	27
HincII	GTYRAC	1 cut(s)	814
HindII	GTYRAC	1 cut(s)	814
HindIII	AAGCTT	1 cut(s)	2321
HinfI	GANTC	6 cut(s)	479, 634, 1376, 1390, 2405, 2419
HpaII	CCGG	5 cut(s)	37, 302, 956, 1828, 2260
HphI	GGTGA	3 cut(s)	612, 669, 1460
Hpy166II	GTNNAC	5 cut(s)	551, 725, 765, 814, 1085
Hpy188III	TCNNGA	7 cut(s)	327, 428, 476, 853, 1332, 1544, 2048
Hpy8I	GTNNAC	5 cut(s)	551, 725, 765, 814, 1085
HpyAV	CCTTC	7 cut(s)	1026, 1445, 1550, 1608, 1628, 2140, 2429
HpyCH4III	ACNGT	8 cut(s)	90, 548, 909, 1595, 1822, 1906, 2062, 2096
HpyCH4IV	ACGT	3 cut(s)	111, 1417, 2284
HpySE526I	ACGT	3 cut(s)	111, 1417, 2284
Hsp92I	GRCGYC	1 cut(s)	1646
HspAI	GCGC	1 cut(s)	27
Ksp22I	TGATCA	1 cut(s)	1351
LguI	GCTCTTC	1 cut(s)	1743
LmnI	GCTCC	6 cut(s)	51, 59, 746, 1761, 2275, 2475
LweI	GCATC	3 cut(s)	70, 92, 637
MaeI	CTAG	4 cut(s)	218, 294, 1509, 1764
MaeII	ACGT	3 cut(s)	111, 1417, 2284
MaeIII	GTNAC	4 cut(s)	283, 795, 909, 1647
MbiI	CCGCTC	1 cut(s)	467
MflI	RGATCY	4 cut(s)	8, 227, 1663, 1930
MhlI	GDGCHC	4 cut(s)	56, 370, 1942, 2116
MluCI	AATT	7 cut(s)	421, 555, 805, 1456, 1806, 2138, 2484
MlyI	GAGTC	2 cut(s)	643, 2428
MmeI	TCCRAC	3 cut(s)	375, 870, 2068
Mph1103I	ATGCAT	1 cut(s)	85
MseI	TTAA	5 cut(s)	1194, 1835, 2069, 2367, 2427
MslI	CAYNNNNRTG	3 cut(s)	888, 1791, 2304
MspA1I	CMGCKG	1 cut(s)	1874
MspCI	CTTAAG	1 cut(s)	1834
MspI	CCGG	5 cut(s)	37, 302, 956, 1828, 2260
MspR9I	CCNGG	8 cut(s)	38, 302, 303, 597, 611, 1253, 1446, 2261
Mva1269I	GAATGC	1 cut(s)	1357
MvaI	CCWGG	4 cut(s)	597, 611, 1253, 1446
MvnI	CGCG	1 cut(s)	29
NciI	CCSGG	4 cut(s)	38, 302, 303, 2261
NcoI	CCATGG	1 cut(s)	1786
NdeI	CATATG	1 cut(s)	1164
NlaIV	GGNNCC	6 cut(s)	175, 368, 608, 960, 1494, 2023
NmuCI	GTSAC	2 cut(s)	795, 1647
NsiI	ATGCAT	1 cut(s)	85
NspI	RCATGY	4 cut(s)	757, 1208, 1469, 1917
NspV	TTCGAA	1 cut(s)	201
PasI	CCCWGGG	1 cut(s)	610
PciSI	GCTCTTC	1 cut(s)	1743
PcsI	WCGNNNNNNNCGW	2 cut(s)	108, 150
PctI	GAATGC	1 cut(s)	1357
PfeI	GAWTC	4 cut(s)	479, 1376, 1390, 2405
PflMI	CCANNNNNTGG	1 cut(s)	112
PfoI	TCCNGGA	1 cut(s)	36
PinAI	ACCGGT	1 cut(s)	955
PleI	GAGTC	2 cut(s)	642, 2427
PpsI	GAGTC	2 cut(s)	642, 2427
Ppu21I	YACGTR	1 cut(s)	2285
PpuMI	RGGWCCY	1 cut(s)	606
PshAI	GACNNNNGTC	1 cut(s)	898
PsiI	TTATAA	1 cut(s)	2491
Psp124BI	GAGCTC	1 cut(s)	56
Psp5II	RGGWCCY	1 cut(s)	606
Psp6I	CCWGG	4 cut(s)	595, 609, 1251, 1444
PspFI	CCCAGC	2 cut(s)	1277, 2211
PspGI	CCWGG	4 cut(s)	595, 609, 1251, 1444
PspN4I	GGNNCC	6 cut(s)	175, 368, 608, 960, 1494, 2023
PspOMI	GGGCCC	1 cut(s)	366
PspPPI	RGGWCCY	1 cut(s)	606
PstI	CTGCAG	2 cut(s)	1873, 2193
PstNI	CAGNNNCTG	2 cut(s)	631, 1877
PsuI	RGATCY	4 cut(s)	8, 227, 1663, 1930
PvuII	CAGCTG	1 cut(s)	1874
RsaI	GTAC	2 cut(s)	191, 2064
RsaNI	GTAC	2 cut(s)	190, 2063
RseI	CAYNNNNRTG	3 cut(s)	888, 1791, 2304
SacI	GAGCTC	1 cut(s)	56
SapI	GCTCTTC	1 cut(s)	1743
SaqAI	TTAA	5 cut(s)	1194, 1835, 2069, 2367, 2427
SchI	GAGTC	2 cut(s)	643, 2428
ScrFI	CCNGG	8 cut(s)	38, 302, 303, 597, 611, 1253, 1446, 2261
SduI	GDGCHC	4 cut(s)	56, 370, 1942, 2116
SfaNI	GCATC	3 cut(s)	70, 92, 637
SfcI	CTRYAG	4 cut(s)	533, 1869, 2095, 2189
SfuI	TTCGAA	1 cut(s)	201
SinI	GGWCC	5 cut(s)	174, 290, 397, 606, 958
SmaI	CCCGGG	1 cut(s)	303
SmiMI	CAYNNNNRTG	3 cut(s)	888, 1791, 2304
SmlI	CTYRAG	2 cut(s)	1101, 1834
SmoI	CTYRAG	2 cut(s)	1101, 1834
Sse9I	AATT	7 cut(s)	421, 555, 805, 1456, 1806, 2138, 2484
SspI	AATATT	2 cut(s)	2162, 2199
SspMI	CTAG	4 cut(s)	218, 294, 1509, 1764
SstI	GAGCTC	1 cut(s)	56
StyD4I	CCNGG	8 cut(s)	36, 300, 301, 595, 609, 1251, 1444, 2259
StyI	CCWWGG	4 cut(s)	217, 1786, 1999, 2247
TaaI	ACNGT	8 cut(s)	90, 548, 909, 1595, 1822, 1906, 2062, 2096
TaiI	ACGT	3 cut(s)	114, 1420, 2287
TaqI	TCGA	6 cut(s)	201, 469, 1283, 1564, 2133, 2478
TasI	AATT	7 cut(s)	421, 555, 805, 1456, 1806, 2138, 2484
TatI	WGTACW	1 cut(s)	2062
TauI	GCSGC	5 cut(s)	21, 24, 27, 1621, 1646
TfiI	GAWTC	4 cut(s)	479, 1376, 1390, 2405
Tru1I	TTAA	5 cut(s)	1194, 1835, 2069, 2367, 2427
Tru9I	TTAA	5 cut(s)	1194, 1835, 2069, 2367, 2427
TscAI	CASTG	2 cut(s)	553, 2389
TseFI	GTSAC	2 cut(s)	795, 1647
Tsp45I	GTSAC	2 cut(s)	795, 1647
TspDTI	ATGAA	6 cut(s)	339, 698, 1962, 2151, 2193, 2411
TspGWI	ACGGA	4 cut(s)	166, 447, 1056, 1397
TspMI	CCCGGG	1 cut(s)	301
TspRI	CASTG	2 cut(s)	553, 2389
Van91I	CCANNNNNTGG	1 cut(s)	112
Vha464I	CTTAAG	1 cut(s)	1834
VpaK11BI	GGWCC	5 cut(s)	174, 290, 397, 606, 958
XagI	CCTNNNNNAGG	2 cut(s)	1449, 2120
XapI	RAATTY	1 cut(s)	2138
XceI	RCATGY	4 cut(s)	757, 1208, 1469, 1917
XmaI	CCCGGG	1 cut(s)	301
XmaJI	CCTAGG	1 cut(s)	217
XspI	CTAG	4 cut(s)	218, 294, 1509, 1764
Zsp2I	ATGCAT	1 cut(s)	85

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.