Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0010360

Physical Location & Seq

Genomic Coordinates Reverse (-)

4327435 .. 4332402

Gene Structure 4968 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g05810.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2415 bp

ATGGAGAGATCTAATGGCACAGATTTCAATGACGTGCTTGAGAGTTCCTCGCCAGAGAATAAACTCTTTGATGCATCACAATATGAATTTTTCGGTCAAAATGTGGTGGACGAAGTTGAGTTGGGGGGTTTGGACTACGAGGAAGGCAGAAAACCTTTGTTTGGGCCTGCTGATAATGAGTACCATTTATTTGAGAAGGATGAGGCTCTTGGTTTGGGATCTTTATCTGACATAGATGATCTGGCAAGCACTTTTGCAAAGTTAAACAAAGTTGTAACAGGACCAAGACATCCAGGTGTTATTGGAGACAGAGGTTCAGGATCCTTTTCACGAGAAAGTTCATCAGCTACTGATTGGGCCCAAGACGGAGATTTCAATAACTGGTTAGATCAGCATATGTTTGATACAGAATTTTCCGAGGAAGGAAAGAGGTGGTCATCACAGCCGCAACCTTCTTCTGCTCGATTTTCAGAATCAAAACAACCAAAACCTTTGTACAGAACATCGTCATACCCAGACCAGCAGCCAGTCCAGCATCACTTCTCCAGTGAACCAATTGTACCGCCCAAGTCAGCATTCACATCATTCCCTCCTCCTGGAAACAAGTCCCCGCAGGGCTCACCACATCAGCTGAATCTTTCTGCTCTTGTGGGTGGTTCCCAGTTGCCTTTTTCTGCACCAAACCTTTCTCCTTTATCTAACTCTAATCTTCATATGGCCGGTTTACCTCATGGGTTGCATTATGGAGGGAACATGCCTCAGTTTGCCAACCCTAGCCTTCCTTTCAATAGCAGGTCACAGAATCATTGGGTTATGCATGCTGGAGTATTGCACGGCGATCATTCCAGCCTCAGAAACAATATGTTGCAGCAACAGCTCCCTCATCAAAATGGACTCCTGTCCCCACAATTACTGTCAGCTCAGCAGCAGCTACAACAGCAGAGATTGCACCATTCGGTTCAGCCATCTTTGGCCCATTTTGCTGCAATGCAGTCTCAATTTTATGGTACTCACCCTTCTTCATCACATAAGTCAATGCATGGGTTGTCTGACATAAGTAATCATAGACCGAAAAGAGGAAAACATCGCTTTTCTCAAGGCTCTGATACTGGTAGTCAGAAAAGTGAGAGTGGGTGGATCCAGTTCACATCTAAGCACATGACATCTGAAGAGATAGAGAGTATTCTTAAAATGCAGCATGCTGCAACACACAGCAATGACCCCTATATTGATGATTATTACCACCAGGCAAGTCTTTCCAAAAAAGCAGCTGGCTCGCGGTCGAAACATCCTTTTTGCCCATCTCATCTTAGAGAGTTCCCTTCCCGCGGCCGTAATAGTACTGATCAGCATACTCATAGTTCTGTCGACGCTCTTGGGAGAATTCCCCTTGCTTCCATACGTAGGCCTCGCCCCCTCCTTGAAGTTGACCCTCCCCCTGGTTCTGGCGATGGCGAGCAGGTCTCTGAGAAGCCTCTGGAGCAGGAACCCATGCTTGCTGCTAGAATTGCCGTTGAGGATGGTCTTTGTCTCCTTCTTGATGTTGATGATATTGATCGACTGCTACAGCATGGTCAGCCCCAAGATGGTGGGGTTCAACTCAGGCGAAGGCGGCAAATACTGCTGGAGGGATTGGCTGCATCACTTCAGCTTGTCGACCCACTTGGTAAAGGCAGCCACTCAGCGGGGCTGGCTCCAAAGGATGACATTGTGTTCCTACGTTTAGTTTCTCTTCCCAAGGGGCGAAAGCTCCTTTCTAAGTTTATTCAGCTTCTCTTCCCTGGTAGCGAGCTTGCCCGTATTGTGTGTATGACAGTATTCCGTCATTTAAGGTTTTTGTATGGTGGCCTACCTTCTGATCCTGGAGCTGCTGAGACAACTAGTAATCTTGCAAAGAGAGTTTCTACATGTGTAAATGGTATGGATCTTCGCGCGTTAAGTGCTTGTCTTGTTGCAGTAGTTTGTTCATCAGAGCAGCCGCCGCTCCGACCCCTTGGAAGCCCTGCTGGAGATGGGGCCACTATTATCCTAAAATCTGTTCTTGAAAGGGCAACTGTACTCTTAAGCGACCCTCACGCTGCTGGGAGCTGTAGCATTTCTAACCGTGCCCTTTGGCAGGCATCATTTGATGAGTTTTTCGGTCTTCTCACTAAGTATTGCCTGAGTAAGTATGAAACTATTGTACAATCAATATTTACGCAGAGTCAGCAAAGCACAGAAGCTATTGGTTCAGAGGCAACCAAGGCGATACATCGTGAAATGCCTGTGGAGCTTCTGCGTGCTAGTCTTTCTCACACAGATGAGCGTCAACGGAAGTTTTTGTCAGATTTTGCTCATCGATCAATGCCCATTTCTGGTCTTAATGGCCATGGCGGGAACGGAGGTCAAATGAACTCTGAATCAGTGAGGGGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000288 GO:0000290 GO:0000932 GO:0000956 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0012505 GO:0016043 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0019827 GO:0022607 GO:0022613 GO:0022618 GO:0032501 GO:0032502 GO:0032991 GO:0033962 GO:0034622 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0060255 GO:0065003 GO:0065007 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097159 GO:0098727 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

No domains found.

Protein Analysis

805

Amino Acids

88.11

Weight (kDa)

6.5

Isoelectric Point (pI)

57.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010360)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22270 AT4G14990 AT4G14990
fragaria_vesca	FvH4_6g39760 FvH4_6g39760
malus_domestica	MD09G1137000.v1.1 MD17G1127200.v1.1
prunus_persica	Prupe.3G188000_v2.0.a1
pyrus_communis	pycom09g05810 pycom17g11950
rosa_chinensis	RchiOBHm_Chr2g0153871
rosa_laevigata	RLG00000020735
rosa_multiflora	Rmu_sc0003887.1_g000011
rosa_roxburghii	Rroxscaffold_2G00094690
rosa_rugosa	Rorug02G0442800 Rorug02G0442900
rosa_samantha	Rh2AG506600 Rh2BG516600 Rh2CG492300 Rh2DG528700
rosa_wichuraiana	Rw2G041580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	783, 1450
AccBSI	CCGCTC	1 cut(s)	1984
AccI	GTMKAC	2 cut(s)	1368, 1656
AccII	CGCG	4 cut(s)	1279, 1329, 1932, 1934
AclWI	GGATC	7 cut(s)	226, 315, 328, 1132, 1145, 1853, 1932
AcoI	YGGCCR	3 cut(s)	717, 1330, 2365
AcsI	RAATTY	3 cut(s)	86, 410, 1383
AcuI	CTGAAG	2 cut(s)	1188, 1631
AfaI	GTAC	7 cut(s)	182, 497, 561, 1009, 1342, 2058, 2184
AflII	CTTAAG	1 cut(s)	2062
AflIII	ACRYGT	1 cut(s)	1907
AgsI	TTSAA	6 cut(s)	28, 376, 787, 1424, 1598, 2045
AhlI	ACTAGT	1 cut(s)	1880
AjiI	CACGTC	1 cut(s)	34
AjnI	CCWGG	6 cut(s)	292, 595, 1245, 1438, 1780, 1861
AjuI	GAANNNNNNNTTGG	2 cut(s)	560, 592
Alw26I	GTCTC	5 cut(s)	300, 999, 1468, 1535, 1868
AlwI	GGATC	7 cut(s)	226, 315, 328, 1132, 1145, 1853, 1932
AlwNI	CAGNNNCTG	1 cut(s)	350
AoxI	GGCC	9 cut(s)	164, 357, 717, 972, 1330, 1406, 1846, 2016, 2365
ApaI	GGGCCC	1 cut(s)	361
ApoI	RAATTY	3 cut(s)	86, 410, 1383
AspLEI	GCGC	1 cut(s)	1934
AspS9I	GGNCC	6 cut(s)	164, 281, 357, 358, 973, 2016
AsuHPI	GGTGA	2 cut(s)	612, 1004
AvaII	GGWCC	1 cut(s)	281
BaeGI	GKGCMC	2 cut(s)	361, 2110
BalI	TGGCCA	1 cut(s)	2367
BamHI	GGATCC	2 cut(s)	320, 1137
BanII	GRGCYC	2 cut(s)	361, 620
BarI	GAAGNNNNNNTAC	2 cut(s)	1000, 1032
BauI	CACGAG	1 cut(s)	330
BbsI	GAAGAC	1 cut(s)	2135
BccI	CCATC	6 cut(s)	973, 1309, 1445, 1514, 1580, 2006
BceAI	ACGGC	3 cut(s)	850, 1317, 1496
BcgI	CGANNNNNNTGC	2 cut(s)	1257, 1291
BciT130I	CCWGG	6 cut(s)	294, 597, 1247, 1440, 1782, 1863
BclI	TGATCA	1 cut(s)	1345
BcoDI	GTCTC	5 cut(s)	300, 999, 1468, 1535, 1868
BcuI	ACTAGT	1 cut(s)	1880
BfaI	CTAG	4 cut(s)	774, 1503, 1881, 2283
BfmI	CTRYAG	2 cut(s)	1565, 2089
BfrI	CTTAAG	1 cut(s)	2062
BfuAI	ACCTGC	2 cut(s)	783, 1450
BglII	AGATCT	1 cut(s)	8
BlpI	GCTNAGC	1 cut(s)	921
BmcAI	AGTACT	1 cut(s)	1342
Bme1390I	CCNGG	6 cut(s)	294, 597, 1247, 1440, 1782, 1863
Bme18I	GGWCC	1 cut(s)	281
BmgBI	CACGTC	1 cut(s)	34
BmgT120I	GGNCC	6 cut(s)	164, 281, 357, 358, 973, 2016
BmiI	GGNNCC	7 cut(s)	322, 359, 658, 1139, 1488, 1695, 2017
BmrFI	CCNGG	6 cut(s)	294, 597, 1247, 1440, 1782, 1863
BmrI	ACTGGG	1 cut(s)	655
BmsI	GCATC	5 cut(s)	61, 83, 544, 1649, 2129
BmuI	ACTGGG	1 cut(s)	655
BoxI	GACNNNNGTC	1 cut(s)	898
BpiI	GAAGAC	1 cut(s)	2135
BplI	GAGNNNNNCTC	4 cut(s)	32, 64, 1448, 1480
BpmI	CTGGAG	6 cut(s)	529, 843, 1499, 1646, 1884, 2028
Bpu1102I	GCTNAGC	1 cut(s)	921
BpuEI	CTTGAG	2 cut(s)	59, 1080
Bsa29I	ATCGAT	1 cut(s)	2338
BsaAI	YACGTR	1 cut(s)	1403
BsaBI	GATNNNNATC	2 cut(s)	223, 1554
BsaI	GGTCTC	1 cut(s)	1468
BsaJI	CCNNGG	8 cut(s)	417, 1327, 1438, 1737, 1780, 1993, 2241, 2368
Bse118I	RCCGGY	1 cut(s)	719
Bse1I	ACTGG	6 cut(s)	386, 527, 546, 661, 1114, 1141
Bse3DI	GCAATG	2 cut(s)	993, 1222
Bse8I	GATNNNNATC	2 cut(s)	223, 1554
BseBI	CCWGG	6 cut(s)	294, 597, 1247, 1440, 1782, 1863
BseCI	ATCGAT	1 cut(s)	2338
BseDI	CCNNGG	8 cut(s)	417, 1327, 1438, 1737, 1780, 1993, 2241, 2368
BseGI	GGATG	5 cut(s)	205, 289, 1288, 1525, 1708
BseJI	GATNNNNATC	2 cut(s)	223, 1554
BseMI	GCAATG	2 cut(s)	993, 1222
BseMII	CTCAG	8 cut(s)	773, 865, 935, 1458, 1615, 1695, 1863, 2153
BseNI	ACTGG	6 cut(s)	386, 527, 546, 661, 1114, 1141
BseRI	GAGGAG	1 cut(s)	582
BseSI	GKGCMC	2 cut(s)	361, 2110
BseX3I	CGGCCG	1 cut(s)	1330
BseYI	CCCAGC	1 cut(s)	2081
BsgI	GTGCAG	1 cut(s)	660
Bsh1236I	CGCG	4 cut(s)	1279, 1329, 1932, 1934
Bsh1285I	CGRYCG	2 cut(s)	1283, 1333
BshFI	GGCC	9 cut(s)	166, 359, 719, 974, 1332, 1408, 1848, 2018, 2367
BshVI	ATCGAT	1 cut(s)	2338
BsiEI	CGRYCG	2 cut(s)	1283, 1333
BsiSI	CCGG	1 cut(s)	720
BslFI	GGGAC	2 cut(s)	592, 886
BsmAI	GTCTC	5 cut(s)	300, 999, 1468, 1535, 1868
BsmFI	GGGAC	2 cut(s)	592, 886
BsmI	GAATGC	1 cut(s)	575
BsnI	GGCC	9 cut(s)	166, 359, 719, 974, 1332, 1408, 1848, 2018, 2367
Bso31I	GGTCTC	1 cut(s)	1468
Bsp120I	GGGCCC	1 cut(s)	357
Bsp1286I	GDGCHC	3 cut(s)	361, 620, 2110
Bsp1407I	TGTACA	2 cut(s)	495, 2182
Bsp1720I	GCTNAGC	1 cut(s)	921
Bsp19I	CCATGG	1 cut(s)	2368
BspANI	GGCC	9 cut(s)	166, 359, 719, 974, 1332, 1408, 1848, 2018, 2367
BspCNI	CTCAG	8 cut(s)	772, 864, 934, 1459, 1614, 1694, 1864, 2154
BspDI	ATCGAT	1 cut(s)	2338
BspFNI	CGCG	4 cut(s)	1279, 1329, 1932, 1934
BspLI	GGNNCC	7 cut(s)	322, 359, 658, 1139, 1488, 1695, 2017
BspMI	ACCTGC	2 cut(s)	783, 1450
BspPI	GGATC	7 cut(s)	226, 315, 328, 1132, 1145, 1853, 1932
BspTI	CTTAAG	1 cut(s)	2062
BspTNI	GGTCTC	1 cut(s)	1468
BsrBI	CCGCTC	1 cut(s)	1984
BsrDI	GCAATG	2 cut(s)	993, 1222
BsrFI	RCCGGY	1 cut(s)	719
BsrGI	TGTACA	2 cut(s)	495, 2182
BsrI	ACTGG	6 cut(s)	386, 527, 546, 661, 1114, 1141
BssAI	RCCGGY	1 cut(s)	719
BssECI	CCNNGG	8 cut(s)	417, 1327, 1438, 1737, 1780, 1993, 2241, 2368
BssSI	CACGAG	1 cut(s)	330
BssT1I	CCWWGG	4 cut(s)	1737, 1993, 2241, 2368
Bst2BI	CACGAG	1 cut(s)	330
Bst2UI	CCWGG	6 cut(s)	294, 597, 1247, 1440, 1782, 1863
Bst4CI	ACNGT	4 cut(s)	915, 1816, 2056, 2105
Bst6I	CTCTTC	3 cut(s)	1164, 1737, 1781
BstAFI	CTTAAG	1 cut(s)	2062
BstAPI	GCANNNNNTGC	2 cut(s)	946, 1621
BstAUI	TGTACA	2 cut(s)	495, 2182
BstBAI	YACGTR	1 cut(s)	1403
BstDSI	CCRYGG	2 cut(s)	1327, 2368
BstENI	CCTNNNNNAGG	1 cut(s)	2114
BstF5I	GGATG	5 cut(s)	205, 289, 1288, 1525, 1708
BstFNI	CGCG	4 cut(s)	1279, 1329, 1932, 1934
BstHHI	GCGC	1 cut(s)	1934
BstMAI	GTCTC	5 cut(s)	300, 999, 1468, 1535, 1868
BstMCI	CGRYCG	2 cut(s)	1283, 1333
BstNI	CCWGG	6 cut(s)	294, 597, 1247, 1440, 1782, 1863
BstNSI	RCATGY	4 cut(s)	757, 821, 1202, 1911
BstPAI	GACNNNNGTC	1 cut(s)	898
BstSCI	CCNGG	6 cut(s)	292, 595, 1245, 1438, 1780, 1861
BstSFI	CTRYAG	2 cut(s)	1565, 2089
BstSLI	GKGCMC	2 cut(s)	361, 2110
BstSNI	TACGTA	1 cut(s)	1403
BstUI	CGCG	4 cut(s)	1279, 1329, 1932, 1934
BstV2I	GAAGAC	1 cut(s)	2135
BstX2I	RGATCY	5 cut(s)	8, 218, 320, 1137, 1924
BstXI	CCANNNNNNTGG	1 cut(s)	1589
BstYI	RGATCY	5 cut(s)	8, 218, 320, 1137, 1924
BstZI	CGGCCG	1 cut(s)	1330
Bsu15I	ATCGAT	1 cut(s)	2338
BsuRI	GGCC	9 cut(s)	166, 359, 719, 974, 1332, 1408, 1848, 2018, 2367
BsuTUI	ATCGAT	1 cut(s)	2338
BtgI	CCRYGG	2 cut(s)	1327, 2368
BtgZI	GCGATG	2 cut(s)	1070, 1464
BtrI	CACGTC	1 cut(s)	34
BtsCI	GGATG	5 cut(s)	205, 289, 1288, 1525, 1708
BtsIMutI	CAGTG	2 cut(s)	553, 2409
BveI	ACCTGC	2 cut(s)	783, 1450
CaiI	CAGNNNCTG	1 cut(s)	350
CfoI	GCGC	1 cut(s)	1934
Cfr10I	RCCGGY	1 cut(s)	719
Cfr13I	GGNCC	6 cut(s)	164, 281, 357, 358, 973, 2016
Cfr42I	CCGCGG	1 cut(s)	1330
ClaI	ATCGAT	1 cut(s)	2338
CseI	GACGC	2 cut(s)	1379, 2294
Csp6I	GTAC	7 cut(s)	181, 496, 560, 1008, 1341, 2057, 2183
CviQI	GTAC	7 cut(s)	181, 496, 560, 1008, 1341, 2057, 2183
EaeI	YGGCCR	3 cut(s)	717, 1330, 2365
EagI	CGGCCG	1 cut(s)	1330
Eam1104I	CTCTTC	3 cut(s)	1164, 1737, 1781
EarI	CTCTTC	3 cut(s)	1164, 1737, 1781
EclXI	CGGCCG	1 cut(s)	1330
Eco105I	TACGTA	1 cut(s)	1403
Eco130I	CCWWGG	4 cut(s)	1737, 1993, 2241, 2368
Eco147I	AGGCCT	1 cut(s)	1408
Eco24I	GRGCYC	2 cut(s)	361, 620
Eco31I	GGTCTC	1 cut(s)	1468
Eco47I	GGWCC	1 cut(s)	281
Eco52I	CGGCCG	1 cut(s)	1330
Eco57I	CTGAAG	2 cut(s)	1188, 1631
EcoNI	CCTNNNNNAGG	1 cut(s)	2114
EcoRI	GAATTC	1 cut(s)	1383
EcoRII	CCWGG	6 cut(s)	292, 595, 1245, 1438, 1780, 1861
EcoT14I	CCWWGG	4 cut(s)	1737, 1993, 2241, 2368
EcoT22I	ATGCAT	3 cut(s)	76, 819, 1041
EcoT38I	GRGCYC	2 cut(s)	361, 620
ErhI	CCWWGG	4 cut(s)	1737, 1993, 2241, 2368
FaqI	GGGAC	2 cut(s)	592, 886
FauI	CCCGC	4 cut(s)	618, 1334, 1678, 2366
FauNDI	CATATG	2 cut(s)	396, 714
FbaI	TGATCA	1 cut(s)	1345
FblI	GTMKAC	2 cut(s)	1368, 1656
FokI	GGATG	5 cut(s)	212, 276, 1275, 1532, 1715
FriOI	GRGCYC	2 cut(s)	361, 620
FspBI	CTAG	4 cut(s)	774, 1503, 1881, 2283
GlaI	GCGC	1 cut(s)	1933
GsaI	CCCAGC	1 cut(s)	2085
GsuI	CTGGAG	6 cut(s)	529, 843, 1499, 1646, 1884, 2028
HaeIII	GGCC	9 cut(s)	166, 359, 719, 974, 1332, 1408, 1848, 2018, 2367
HapII	CCGG	1 cut(s)	720
HgaI	GACGC	2 cut(s)	1379, 2294
HhaI	GCGC	1 cut(s)	1934
Hin6I	GCGC	1 cut(s)	1932
HinP1I	GCGC	1 cut(s)	1932
HincII	GTYRAC	4 cut(s)	1369, 1429, 1657, 2309
HindII	GTYRAC	4 cut(s)	1369, 1429, 1657, 2309
HinfI	GANTC	6 cut(s)	473, 634, 802, 894, 2203, 2399
HpaII	CCGG	1 cut(s)	720
HphI	GGTGA	2 cut(s)	612, 1004
Hpy166II	GTNNAC	8 cut(s)	109, 551, 725, 1146, 1369, 1429, 1657, 2309
Hpy188III	TCNNGA	6 cut(s)	318, 330, 1478, 1538, 2042, 2255
Hpy8I	GTNNAC	8 cut(s)	109, 551, 725, 1146, 1369, 1429, 1657, 2309
Hpy99I	CGWCG	1 cut(s)	1373
HpyCH4III	ACNGT	4 cut(s)	915, 1816, 2056, 2105
HpyCH4IV	ACGT	3 cut(s)	33, 1402, 1720
HpySE526I	ACGT	3 cut(s)	33, 1402, 1720
HspAI	GCGC	1 cut(s)	1932
Ksp22I	TGATCA	1 cut(s)	1345
KspI	CCGCGG	1 cut(s)	1330
LmnI	GCTCC	8 cut(s)	882, 1480, 1699, 1755, 1865, 1989, 2085, 2269
LweI	GCATC	5 cut(s)	61, 83, 544, 1649, 2129
MaeI	CTAG	4 cut(s)	774, 1503, 1881, 2283
MaeII	ACGT	3 cut(s)	33, 1402, 1720
MaeIII	GTNAC	2 cut(s)	274, 795
MbiI	CCGCTC	1 cut(s)	1984
MboII	GAAGA	8 cut(s)	447, 701, 1011, 1181, 1724, 1768, 1919, 2135
MfeI	CAATTG	1 cut(s)	555
MflI	RGATCY	5 cut(s)	8, 218, 320, 1137, 1924
MhlI	GDGCHC	3 cut(s)	361, 620, 2110
MlsI	TGGCCA	1 cut(s)	2367
MluCI	AATT	7 cut(s)	86, 410, 555, 908, 998, 1383, 1506
MluNI	TGGCCA	1 cut(s)	2367
MlyI	GAGTC	2 cut(s)	888, 2212
MmeI	TCCRAC	1 cut(s)	2011
Mox20I	TGGCCA	1 cut(s)	2367
Mph1103I	ATGCAT	3 cut(s)	76, 819, 1041
MscI	TGGCCA	1 cut(s)	2367
MseI	TTAA	6 cut(s)	263, 1188, 1829, 1937, 2063, 2361
MslI	CAYNNNNRTG	4 cut(s)	294, 888, 1215, 2298
Msp20I	TGGCCA	1 cut(s)	2367
MspA1I	CMGCKG	4 cut(s)	631, 1271, 1329, 1685
MspCI	CTTAAG	1 cut(s)	2062
MspI	CCGG	1 cut(s)	720
MspR9I	CCNGG	6 cut(s)	294, 597, 1247, 1440, 1782, 1863
MunI	CAATTG	1 cut(s)	555
Mva1269I	GAATGC	1 cut(s)	575
MvaI	CCWGG	6 cut(s)	294, 597, 1247, 1440, 1782, 1863
MvnI	CGCG	4 cut(s)	1279, 1329, 1932, 1934
NcoI	CCATGG	1 cut(s)	2368
NdeI	CATATG	2 cut(s)	396, 714
NlaIV	GGNNCC	7 cut(s)	322, 359, 658, 1139, 1488, 1695, 2017
NmuCI	GTSAC	1 cut(s)	795
NsiI	ATGCAT	3 cut(s)	76, 819, 1041
NspI	RCATGY	4 cut(s)	757, 821, 1202, 1911
PaeI	GCATGC	2 cut(s)	821, 1202
PceI	AGGCCT	1 cut(s)	1408
PciI	ACATGT	1 cut(s)	1907
PctI	GAATGC	1 cut(s)	575
PfeI	GAWTC	4 cut(s)	473, 634, 802, 2399
PfoI	TCCNGGA	2 cut(s)	595, 1861
PleI	GAGTC	2 cut(s)	888, 2211
PpsI	GAGTC	2 cut(s)	888, 2211
Ppu21I	YACGTR	1 cut(s)	1403
PscI	ACATGT	1 cut(s)	1907
PshAI	GACNNNNGTC	1 cut(s)	898
Psp6I	CCWGG	6 cut(s)	292, 595, 1245, 1438, 1780, 1861
PspFI	CCCAGC	1 cut(s)	2081
PspGI	CCWGG	6 cut(s)	292, 595, 1245, 1438, 1780, 1861
PspN4I	GGNNCC	7 cut(s)	322, 359, 658, 1139, 1488, 1695, 2017
PspOMI	GGGCCC	1 cut(s)	357
PspPI	GGNCC	6 cut(s)	164, 281, 357, 358, 973, 2016
PsrI	GAACNNNNNNTAC	2 cut(s)	543, 575
PstNI	CAGNNNCTG	1 cut(s)	350
PsuI	RGATCY	5 cut(s)	8, 218, 320, 1137, 1924
PvuII	CAGCTG	2 cut(s)	631, 1271
RsaI	GTAC	7 cut(s)	182, 497, 561, 1009, 1342, 2058, 2184
RsaNI	GTAC	7 cut(s)	181, 496, 560, 1008, 1341, 2057, 2183
RseI	CAYNNNNRTG	4 cut(s)	294, 888, 1215, 2298
SacII	CCGCGG	1 cut(s)	1330
SalI	GTCGAC	2 cut(s)	1367, 1655
SaqAI	TTAA	6 cut(s)	263, 1188, 1829, 1937, 2063, 2361
Sau96I	GGNCC	6 cut(s)	164, 281, 357, 358, 973, 2016
ScaI	AGTACT	1 cut(s)	1342
SchI	GAGTC	2 cut(s)	888, 2212
ScrFI	CCNGG	6 cut(s)	294, 597, 1247, 1440, 1782, 1863
SduI	GDGCHC	3 cut(s)	361, 620, 2110
SfaNI	GCATC	5 cut(s)	61, 83, 544, 1649, 2129
SfcI	CTRYAG	2 cut(s)	1565, 2089
Sfr303I	CCGCGG	1 cut(s)	1330
SgrBI	CCGCGG	1 cut(s)	1330
SinI	GGWCC	1 cut(s)	281
SmiMI	CAYNNNNRTG	4 cut(s)	294, 888, 1215, 2298
SmlI	CTYRAG	3 cut(s)	38, 1095, 2062
SmoI	CTYRAG	3 cut(s)	38, 1095, 2062
SnaBI	TACGTA	1 cut(s)	1403
SpeI	ACTAGT	1 cut(s)	1880
SphI	GCATGC	2 cut(s)	821, 1202
Sse9I	AATT	7 cut(s)	86, 410, 555, 908, 998, 1383, 1506
SseBI	AGGCCT	1 cut(s)	1408
SspI	AATATT	1 cut(s)	2193
SspMI	CTAG	4 cut(s)	774, 1503, 1881, 2283
StuI	AGGCCT	1 cut(s)	1408
StyD4I	CCNGG	6 cut(s)	292, 595, 1245, 1438, 1780, 1861
StyI	CCWWGG	4 cut(s)	1737, 1993, 2241, 2368
TaaI	ACNGT	4 cut(s)	915, 1816, 2056, 2105
TaiI	ACGT	3 cut(s)	36, 1405, 1723
TaqI	TCGA	6 cut(s)	463, 1283, 1368, 1558, 1656, 2338
TaqII	GACCGA	3 cut(s)	83, 1084, 2129
TasI	AATT	7 cut(s)	86, 410, 555, 908, 998, 1383, 1506
TatI	WGTACW	4 cut(s)	495, 1340, 2056, 2182
TauI	GCSGC	5 cut(s)	448, 1332, 1615, 1981, 1984
TfiI	GAWTC	4 cut(s)	473, 634, 802, 2399
Tru1I	TTAA	6 cut(s)	263, 1188, 1829, 1937, 2063, 2361
Tru9I	TTAA	6 cut(s)	263, 1188, 1829, 1937, 2063, 2361
TscAI	CASTG	2 cut(s)	553, 2409
TseFI	GTSAC	1 cut(s)	795
Tsp45I	GTSAC	1 cut(s)	795
TspDTI	ATGAA	7 cut(s)	99, 330, 701, 1011, 1956, 2187, 2405
TspGWI	ACGGA	4 cut(s)	381, 1811, 2326, 2394
TspRI	CASTG	2 cut(s)	553, 2409
Vha464I	CTTAAG	1 cut(s)	2062
VpaK11BI	GGWCC	1 cut(s)	281
XagI	CCTNNNNNAGG	1 cut(s)	2114
XapI	RAATTY	3 cut(s)	86, 410, 1383
XceI	RCATGY	4 cut(s)	757, 821, 1202, 1911
XmiI	GTMKAC	2 cut(s)	1368, 1656
XspI	CTAG	4 cut(s)	774, 1503, 1881, 2283
ZrmI	AGTACT	1 cut(s)	1342
Zsp2I	ATGCAT	3 cut(s)	76, 819, 1041

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.