Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0010360

Physical Location & Seq

Genomic Coordinates Reverse (-)

11157556 .. 11163655

Gene Structure 6100 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1127200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2412 bp

ATGGAGAGATCTAATGGTACAGATTTCAGGGACTTGCTTGATCGTTCCTCATCAGAGAATAAACTCTTTGATGCGTCACAATATGAATTTTTTGGTCAAAATCTGGTGGACGAGGTTGAGTTGGGGGGTTTGGACGATGAGGAAGACAGGAAACCTTTATTCGGGCCTGTTGATAATGAGTACCATTTATTTGAGAAAGAAGAGGGTCTTGGTTTGGGATCTTTATCTGACATCGATGATCTGGCAAGTACTTTTGCAAAGTTAAACAAAGTTGTAACAGGACCAAGACATCCAGGAGTTATTGGCGACAGAGGTTCAGGATCTTTTTCACGGGAAAGTTCATCAGCTACTGATTGGGCCCAAGACGGAGATTTCAATAACTGGTTAGATCAGCATATGTTTGATACAGAAATTTCCCAGGAAGGAAAGAGGTGGTCTTCACAGCCCCAACCTTCTTCTGCTCTATTTTCAGAATCAAAACAGCAAAAGCCTTTGTACAGAACATCTTCATACCCAGACCAGCAGCCAGTCCAGCATCACTTCTCTAGTGAGCCAATTGTACTGCCCAAGTCAGCATTCACATCATTCCCTCCTCCTGGAAACAAGTTCCAGCAGGGTTCACCACATCAGCTGAATCTTTCTGCTGTTGCTGGTGGTTCCCAGTTGCCTTTTTCTGCACCAAACCTTTCTCCTTTATCTAACTCTAATCTTCATATGGCCGGTTTACCTCTTGGGTTGCATTATGGAGGGAACATGCCTCAGTTTGCCAACCCTGGCCTTCCTTTCAATAGCAGGTCACAAAATCATTGGGTTACCCATGCTGGAGTATTGCACAGCGATCATTCCAGCCTCATAAACAATATATTGCAGCAACAGCTCCCTCATCAAGATGGACTTATTTCCCCACAATTACTGGCAGCTCAGCAGCAGCTACAACAGCAGAGATTGCACCACTCGGTTCAGCCATCTTTGGCCCATTTTGCTGCAATGCAGTCTCAGTTTTATGGTACTCATCCTTCTTCATCTCATAAGTCAATGCATGGGTTGTCCGACGTAAGAGATCATAGACCGAAAAGAGGAAAACAACGTTTTTCTCAAGGCTCTGATGCTGGTAGTCAGAAAAGTGAGACTGGGTGGATCCAGTTCAGGTCTAAGCACATGACATCTGAAGAGATAGAGAGTATTCTTAAAATGCAGCATGCAGCAACACATAGCAATGACCCCTATATTGATGATTACTACCACCAGGCAAGTCTTTCCAAAAAAGCAGCTGGCTCGCGATCGAAACATCCTTTTTGCCCATCTCATCTTAGAGAGTCCCCCTCCCGAGGTCGTAATAGTACTGATCAGCATACTCATAGTTCTGTTGACGCTCTTGGGAGAATTCCTCTCGCTTCCATACGTAGGCCTCGCCCTCTCCTTGAAGTTGATCCTCCCCCTGGTTCTGGTGACGGCAAACAGGCCTCTGAGAAGCCTCTGGAGCAGGAACCCATGCTTGCTGCTAGAATTGCCATTGAGGATGGCCTTTGTCTCCTTCTTGATGTTGATGACATTGATCGACTGCTACAAGGTCAGCCCCAAGATGGTGGGGTTCAACTCAGGCGAAGGCGGCAAATACTGCTAGAAGGGTTGGCAGCATCGCTTCAGCTTGTCGACCCACTTGGTAAAGGCAGCCACTCAGCGGGTTTGGCTCCAAAGGATGACCTTGTGTTCCTACGTATAGTTTCTCTTCCTAAGGGGCGCAAGCTCCTTTCTAGGTTTATTCAGCTTCTCTTCCCTGGTAGCGAGCTTGCCCGTATTGTCTGTATGACAGTTTTCCGTCATTTAAGGTTTTTGTATGGTGGTCTACCCTCTGATCCTGCAGCTGCTGAGACAACTACTAATCTTGCAAAGACAGTTTCTACATGCATAAATGGTGTGGATCTTCGTGCATTAAGTGCTTGTCTTGTTGCAGTTGTTTGTTCATCAGAGCAGCCACCACTTCGACCCCTTGGAAGCCCTGCTGGAGATGGGGCCACTATTATTCTAAAATCTGTTCTTGAAAGGGCAACTGTACTCTTAAGCGACCCTCACGCTGCTGGAAGCTGTAGCATTTCTAACCGCACCCTTTGGCAGGCATCCTTTGATGAATTTTTTGGTCTGCTCACCAAGTATTGCCTGAGTAAGTATGAAACTATAGTACAATCAATATTTACACAGAGTCAGCAAAGTGCAGAAGTTATTGGTTCAGAGGCCACCAGGGCAATACATCGTGAAATGCCTGTGGAGCTTCTGCGTGCTAGTCTTCCTCACACAGATGAGCATCAGCGGAAGCTTTTGTCAGATTTTTCTCATCGATCAATGCCCATTTCTGGTCTTAATGCCCATGGTGGGAGCGGAGGTCAAATGAACTCTGAATCAGTGAGGGGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000288 GO:0000290 GO:0000932 GO:0000956 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0012505 GO:0016043 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0019827 GO:0022607 GO:0022613 GO:0022618 GO:0032501 GO:0032502 GO:0032991 GO:0033962 GO:0034622 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0060255 GO:0065003 GO:0065007 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097159 GO:0098727 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

No domains found.

Protein Analysis

804

Amino Acids

88.03

Weight (kDa)

6.42

Isoelectric Point (pI)

58.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010360)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22270 AT4G14990 AT4G14990
fragaria_vesca	FvH4_6g39760 FvH4_6g39760
malus_domestica	MD09G1137000.v1.1 MD17G1127200.v1.1
prunus_persica	Prupe.3G188000_v2.0.a1
pyrus_communis	pycom09g05810 pycom17g11950
rosa_chinensis	RchiOBHm_Chr2g0153871
rosa_laevigata	RLG00000020735
rosa_multiflora	Rmu_sc0003887.1_g000011
rosa_roxburghii	Rroxscaffold_2G00094690
rosa_rugosa	Rorug02G0442800 Rorug02G0442900
rosa_samantha	Rh2AG506600 Rh2BG516600 Rh2CG492300 Rh2DG528700
rosa_wichuraiana	Rw2G041580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	783
AccBSI	CCGCTC	1 cut(s)	2376
AccI	GTMKAC	2 cut(s)	1653, 1846
AccII	CGCG	1 cut(s)	1279
AciI	CCGC	5 cut(s)	1609, 1682, 2101, 2308, 2376
AclI	AACGTT	1 cut(s)	1087
AclWI	GGATC	7 cut(s)	226, 328, 1132, 1145, 1424, 1850, 1929
AcoI	YGGCCR	1 cut(s)	717
AcsI	RAATTY	4 cut(s)	86, 411, 1383, 2129
AcuI	CTGAAG	2 cut(s)	1188, 1628
AfaI	GTAC	9 cut(s)	19, 182, 250, 497, 561, 1009, 1342, 2055, 2181
AflII	CTTAAG	1 cut(s)	2059
AgsI	TTSAA	5 cut(s)	376, 787, 1424, 1595, 2042
AjnI	CCWGG	8 cut(s)	292, 417, 595, 772, 1245, 1438, 1777, 2237
AjuI	GAANNNNNNNTTGG	4 cut(s)	192, 224, 560, 592
Alw26I	GTCTC	4 cut(s)	999, 1121, 1535, 1865
AlwI	GGATC	7 cut(s)	226, 328, 1132, 1145, 1424, 1850, 1929
AlwNI	CAGNNNCTG	2 cut(s)	350, 1868
Ama87I	CYCGRG	1 cut(s)	1326
ApaI	GGGCCC	1 cut(s)	361
ApoI	RAATTY	4 cut(s)	86, 411, 1383, 2129
Asp700I	GAANNNNTTC	1 cut(s)	505
AspLEI	GCGC	1 cut(s)	1743
AspS9I	GGNCC	6 cut(s)	164, 281, 357, 358, 973, 2013
AsuHPI	GGTGA	3 cut(s)	612, 1460, 2137
AvaI	CYCGRG	1 cut(s)	1326
AvaII	GGWCC	1 cut(s)	281
AxyI	CCTNAGG	1 cut(s)	1734
BaeGI	GKGCMC	1 cut(s)	361
BamHI	GGATCC	1 cut(s)	1137
BanII	GRGCYC	1 cut(s)	361
BarI	GAAGNNNNNNTAC	2 cut(s)	1000, 1032
BbsI	GAAGAC	3 cut(s)	150, 429, 2276
BccI	CCATC	6 cut(s)	884, 973, 1309, 1514, 1577, 2003
BceAI	ACGGC	1 cut(s)	1468
BcgI	CGANNNNNNTGC	2 cut(s)	1257, 1291
BciT130I	CCWGG	8 cut(s)	294, 419, 597, 774, 1247, 1440, 1779, 2239
BclI	TGATCA	1 cut(s)	1345
BcoDI	GTCTC	4 cut(s)	999, 1121, 1535, 1865
BfaI	CTAG	5 cut(s)	546, 1503, 1622, 1755, 2280
BfmI	CTRYAG	3 cut(s)	1860, 2086, 2175
BfrI	CTTAAG	1 cut(s)	2059
BfuAI	ACCTGC	1 cut(s)	783
BglI	GCCNNNNNGGC	1 cut(s)	2240
BglII	AGATCT	1 cut(s)	8
BlpI	GCTNAGC	1 cut(s)	921
BmcAI	AGTACT	2 cut(s)	250, 1342
Bme1390I	CCNGG	8 cut(s)	294, 419, 597, 774, 1247, 1440, 1779, 2239
Bme18I	GGWCC	1 cut(s)	281
BmeT110I	CYCGRG	1 cut(s)	1326
BmgT120I	GGNCC	6 cut(s)	164, 281, 357, 358, 973, 2013
BmiI	GGNNCC	6 cut(s)	359, 658, 1139, 1488, 1692, 2014
BmrFI	CCNGG	8 cut(s)	294, 419, 597, 774, 1247, 1440, 1779, 2239
BmrI	ACTGGG	2 cut(s)	655, 1140
BmsI	GCATC	6 cut(s)	61, 544, 1096, 1646, 2126, 2311
BmuI	ACTGGG	2 cut(s)	655, 1140
BpiI	GAAGAC	3 cut(s)	150, 429, 2276
BplI	GAGNNNNNCTC	4 cut(s)	1307, 1339, 1372, 1404
BpmI	CTGGAG	3 cut(s)	843, 1499, 2025
Bpu1102I	GCTNAGC	1 cut(s)	921
BpuEI	CTTGAG	1 cut(s)	1080
Bsa29I	ATCGAT	2 cut(s)	234, 2335
BsaAI	YACGTR	2 cut(s)	1403, 1718
BsaBI	GATNNNNATC	2 cut(s)	223, 2301
BsaJI	CCNNGG	8 cut(s)	417, 772, 1327, 1438, 1777, 1990, 2238, 2365
BsaXI	ACNNNNNCTCC	2 cut(s)	2365, 2395
Bse118I	RCCGGY	1 cut(s)	719
Bse1I	ACTGG	6 cut(s)	386, 527, 661, 918, 1135, 1141
Bse21I	CCTNAGG	1 cut(s)	1734
Bse3DI	GCAATG	2 cut(s)	993, 1222
Bse8I	GATNNNNATC	2 cut(s)	223, 2301
BseBI	CCWGG	8 cut(s)	294, 419, 597, 774, 1247, 1440, 1779, 2239
BseCI	ATCGAT	2 cut(s)	234, 2335
BseDI	CCNNGG	8 cut(s)	417, 772, 1327, 1438, 1777, 1990, 2238, 2365
BseGI	GGATG	6 cut(s)	289, 1012, 1288, 1525, 1705, 2117
BseJI	GATNNNNATC	2 cut(s)	223, 2301
BseMI	GCAATG	2 cut(s)	993, 1222
BseMII	CTCAG	8 cut(s)	773, 935, 1010, 1458, 1612, 1692, 1860, 2150
BseNI	ACTGG	6 cut(s)	386, 527, 661, 918, 1135, 1141
BseRI	GAGGAG	1 cut(s)	582
BseSI	GKGCMC	1 cut(s)	361
BsgI	GTGCAG	2 cut(s)	660, 2232
Bsh1236I	CGCG	1 cut(s)	1279
Bsh1285I	CGRYCG	1 cut(s)	1283
BshVI	ATCGAT	2 cut(s)	234, 2335
BsiEI	CGRYCG	1 cut(s)	1283
BsiHKCI	CYCGRG	1 cut(s)	1326
BsiSI	CCGG	1 cut(s)	720
BslFI	GGGAC	2 cut(s)	44, 1303
BsmAI	GTCTC	4 cut(s)	999, 1121, 1535, 1865
BsmFI	GGGAC	2 cut(s)	44, 1303
BsmI	GAATGC	1 cut(s)	575
BsoBI	CYCGRG	1 cut(s)	1326
Bsp120I	GGGCCC	1 cut(s)	357
Bsp1286I	GDGCHC	1 cut(s)	361
Bsp1407I	TGTACA	1 cut(s)	495
Bsp1720I	GCTNAGC	1 cut(s)	921
Bsp19I	CCATGG	1 cut(s)	2365
Bsp68I	TCGCGA	1 cut(s)	1279
BspACI	CCGC	5 cut(s)	1609, 1682, 2101, 2308, 2376
BspCNI	CTCAG	8 cut(s)	772, 934, 1009, 1459, 1611, 1691, 1861, 2151
BspDI	ATCGAT	2 cut(s)	234, 2335
BspFNI	CGCG	1 cut(s)	1279
BspLI	GGNNCC	6 cut(s)	359, 658, 1139, 1488, 1692, 2014
BspMAI	CTGCAG	1 cut(s)	1864
BspMI	ACCTGC	1 cut(s)	783
BspPI	GGATC	7 cut(s)	226, 328, 1132, 1145, 1424, 1850, 1929
BspTI	CTTAAG	1 cut(s)	2059
BsrBI	CCGCTC	1 cut(s)	2376
BsrDI	GCAATG	2 cut(s)	993, 1222
BsrFI	RCCGGY	1 cut(s)	719
BsrGI	TGTACA	1 cut(s)	495
BsrI	ACTGG	6 cut(s)	386, 527, 661, 918, 1135, 1141
BssAI	RCCGGY	1 cut(s)	719
BssECI	CCNNGG	8 cut(s)	417, 772, 1327, 1438, 1777, 1990, 2238, 2365
BssT1I	CCWWGG	2 cut(s)	1990, 2365
Bst2UI	CCWGG	8 cut(s)	294, 419, 597, 774, 1247, 1440, 1779, 2239
Bst4CI	ACNGT	3 cut(s)	1813, 1897, 2053
Bst6I	CTCTTC	4 cut(s)	195, 1164, 1734, 1778
BstAFI	CTTAAG	1 cut(s)	2059
BstAPI	GCANNNNNTGC	3 cut(s)	946, 1618, 1937
BstAUI	TGTACA	1 cut(s)	495
BstBAI	YACGTR	2 cut(s)	1403, 1718
BstC8I	GCNNGC	9 cut(s)	1200, 1273, 1277, 1497, 1745, 1787, 1791, 2115, 2277
BstDSI	CCRYGG	1 cut(s)	2365
BstEII	GGTNACC	1 cut(s)	811
BstENI	CCTNNNNNAGG	1 cut(s)	2111
BstF5I	GGATG	6 cut(s)	289, 1012, 1288, 1525, 1705, 2117
BstFNI	CGCG	1 cut(s)	1279
BstHHI	GCGC	1 cut(s)	1743
BstMAI	GTCTC	4 cut(s)	999, 1121, 1535, 1865
BstMCI	CGRYCG	1 cut(s)	1283
BstNI	CCWGG	8 cut(s)	294, 419, 597, 774, 1247, 1440, 1779, 2239
BstNSI	RCATGY	3 cut(s)	757, 1202, 1908
BstPI	GGTNACC	1 cut(s)	811
BstSCI	CCNGG	8 cut(s)	292, 417, 595, 772, 1245, 1438, 1777, 2237
BstSFI	CTRYAG	3 cut(s)	1860, 2086, 2175
BstSLI	GKGCMC	1 cut(s)	361
BstSNI	TACGTA	2 cut(s)	1403, 1718
BstUI	CGCG	1 cut(s)	1279
BstV2I	GAAGAC	3 cut(s)	150, 429, 2276
BstX2I	RGATCY	5 cut(s)	8, 218, 320, 1137, 1921
BstXI	CCANNNNNNTGG	1 cut(s)	1586
BstYI	RGATCY	5 cut(s)	8, 218, 320, 1137, 1921
Bsu15I	ATCGAT	2 cut(s)	234, 2335
Bsu36I	CCTNAGG	1 cut(s)	1734
BsuTUI	ATCGAT	2 cut(s)	234, 2335
BtgI	CCRYGG	1 cut(s)	2365
BtgZI	GCGATG	1 cut(s)	1623
BtsCI	GGATG	6 cut(s)	289, 1012, 1288, 1525, 1705, 2117
BtsIMutI	CAGTG	1 cut(s)	2406
BtuMI	TCGCGA	1 cut(s)	1279
BveI	ACCTGC	1 cut(s)	783
Cac8I	GCNNGC	9 cut(s)	1200, 1273, 1277, 1497, 1745, 1787, 1791, 2115, 2277
CaiI	CAGNNNCTG	2 cut(s)	350, 1868
CfoI	GCGC	1 cut(s)	1743
Cfr10I	RCCGGY	1 cut(s)	719
Cfr13I	GGNCC	6 cut(s)	164, 281, 357, 358, 973, 2013
ClaI	ATCGAT	2 cut(s)	234, 2335
CseI	GACGC	2 cut(s)	63, 1379
Csp6I	GTAC	9 cut(s)	18, 181, 249, 496, 560, 1008, 1341, 2054, 2180
CviAII	CATG	8 cut(s)	754, 818, 1040, 1159, 1199, 1492, 1905, 2366
CviQI	GTAC	9 cut(s)	18, 181, 249, 496, 560, 1008, 1341, 2054, 2180
EaeI	YGGCCR	1 cut(s)	717
Eam1104I	CTCTTC	4 cut(s)	195, 1164, 1734, 1778
EarI	CTCTTC	4 cut(s)	195, 1164, 1734, 1778
Eco105I	TACGTA	2 cut(s)	1403, 1718
Eco130I	CCWWGG	2 cut(s)	1990, 2365
Eco147I	AGGCCT	2 cut(s)	1408, 1463
Eco24I	GRGCYC	1 cut(s)	361
Eco47I	GGWCC	1 cut(s)	281
Eco57I	CTGAAG	2 cut(s)	1188, 1628
Eco81I	CCTNAGG	1 cut(s)	1734
Eco88I	CYCGRG	1 cut(s)	1326
Eco91I	GGTNACC	1 cut(s)	811
EcoNI	CCTNNNNNAGG	1 cut(s)	2111
EcoO65I	GGTNACC	1 cut(s)	811
EcoRI	GAATTC	1 cut(s)	1383
EcoRII	CCWGG	8 cut(s)	292, 417, 595, 772, 1245, 1438, 1777, 2237
EcoT14I	CCWWGG	2 cut(s)	1990, 2365
EcoT22I	ATGCAT	2 cut(s)	1041, 1910
EcoT38I	GRGCYC	1 cut(s)	361
ErhI	CCWWGG	2 cut(s)	1990, 2365
FaeI	CATG	8 cut(s)	757, 821, 1043, 1162, 1202, 1495, 1908, 2369
FalI	AAGNNNNNCTT	4 cut(s)	192, 224, 879, 911
FaqI	GGGAC	2 cut(s)	44, 1303
FatI	CATG	8 cut(s)	753, 817, 1039, 1158, 1198, 1491, 1904, 2365
FauI	CCCGC	1 cut(s)	1675
FauNDI	CATATG	2 cut(s)	396, 714
FbaI	TGATCA	1 cut(s)	1345
FblI	GTMKAC	2 cut(s)	1653, 1846
FokI	GGATG	6 cut(s)	276, 999, 1275, 1532, 1712, 2104
FriOI	GRGCYC	1 cut(s)	361
FspBI	CTAG	5 cut(s)	546, 1503, 1622, 1755, 2280
GlaI	GCGC	1 cut(s)	1742
GsuI	CTGGAG	3 cut(s)	843, 1499, 2025
HapII	CCGG	1 cut(s)	720
HgaI	GACGC	2 cut(s)	63, 1379
HhaI	GCGC	1 cut(s)	1743
Hin1II	CATG	8 cut(s)	757, 821, 1043, 1162, 1202, 1495, 1908, 2369
Hin6I	GCGC	1 cut(s)	1741
HinP1I	GCGC	1 cut(s)	1741
HincII	GTYRAC	2 cut(s)	1369, 1654
HindII	GTYRAC	2 cut(s)	1369, 1654
HindIII	AAGCTT	1 cut(s)	2312
HinfI	GANTC	5 cut(s)	473, 634, 1316, 2200, 2396
HpaII	CCGG	1 cut(s)	720
HphI	GGTGA	3 cut(s)	612, 1460, 2137
Hpy166II	GTNNAC	6 cut(s)	109, 620, 725, 1369, 1654, 1847
Hpy188III	TCNNGA	8 cut(s)	318, 887, 1278, 1326, 1478, 1538, 2039, 2252
Hpy8I	GTNNAC	6 cut(s)	109, 620, 725, 1369, 1654, 1847
Hpy99I	CGWCG	1 cut(s)	1055
HpyAV	CCTTC	7 cut(s)	416, 462, 788, 1026, 1544, 1599, 1619
HpyCH4III	ACNGT	3 cut(s)	1813, 1897, 2053
HpyCH4IV	ACGT	4 cut(s)	1053, 1087, 1402, 1717
HpySE526I	ACGT	4 cut(s)	1053, 1087, 1402, 1717
Hsp92II	CATG	8 cut(s)	757, 821, 1043, 1162, 1202, 1495, 1908, 2369
HspAI	GCGC	1 cut(s)	1741
Ksp22I	TGATCA	1 cut(s)	1345
LmnI	GCTCC	6 cut(s)	882, 1480, 1696, 1752, 2266, 2373
LweI	GCATC	6 cut(s)	61, 544, 1096, 1646, 2126, 2311
MaeI	CTAG	5 cut(s)	546, 1503, 1622, 1755, 2280
MaeII	ACGT	4 cut(s)	1053, 1087, 1402, 1717
MaeIII	GTNAC	5 cut(s)	75, 274, 795, 811, 1448
MbiI	CCGCTC	1 cut(s)	2376
MfeI	CAATTG	1 cut(s)	555
MflI	RGATCY	5 cut(s)	8, 218, 320, 1137, 1921
MhlI	GDGCHC	1 cut(s)	361
MluCI	AATT	7 cut(s)	86, 411, 555, 908, 1383, 1506, 2129
MlyI	GAGTC	2 cut(s)	1325, 2209
MmeI	TCCRAC	1 cut(s)	1074
Mph1103I	ATGCAT	2 cut(s)	1041, 1910
MroXI	GAANNNNTTC	1 cut(s)	505
MseI	TTAA	6 cut(s)	263, 1188, 1826, 1934, 2060, 2358
MslI	CAYNNNNRTG	3 cut(s)	888, 1215, 2295
MspA1I	CMGCKG	5 cut(s)	631, 1271, 1682, 1865, 2308
MspCI	CTTAAG	1 cut(s)	2059
MspI	CCGG	1 cut(s)	720
MspR9I	CCNGG	8 cut(s)	294, 419, 597, 774, 1247, 1440, 1779, 2239
MunI	CAATTG	1 cut(s)	555
Mva1269I	GAATGC	1 cut(s)	575
MvaI	CCWGG	8 cut(s)	294, 419, 597, 774, 1247, 1440, 1779, 2239
MvnI	CGCG	1 cut(s)	1279
NcoI	CCATGG	1 cut(s)	2365
NdeI	CATATG	2 cut(s)	396, 714
NlaIII	CATG	8 cut(s)	757, 821, 1043, 1162, 1202, 1495, 1908, 2369
NlaIV	GGNNCC	6 cut(s)	359, 658, 1139, 1488, 1692, 2014
NmuCI	GTSAC	3 cut(s)	75, 795, 1448
NruI	TCGCGA	1 cut(s)	1279
NsiI	ATGCAT	2 cut(s)	1041, 1910
NspI	RCATGY	3 cut(s)	757, 1202, 1908
PaeI	GCATGC	1 cut(s)	1202
PceI	AGGCCT	2 cut(s)	1408, 1463
PctI	GAATGC	1 cut(s)	575
PdmI	GAANNNNTTC	1 cut(s)	505
PfeI	GAWTC	3 cut(s)	473, 634, 2396
PfoI	TCCNGGA	2 cut(s)	292, 595
Ple19I	CGATCG	1 cut(s)	1283
PleI	GAGTC	2 cut(s)	1324, 2208
PpsI	GAGTC	2 cut(s)	1324, 2208
Ppu21I	YACGTR	2 cut(s)	1403, 1718
Psp1406I	AACGTT	1 cut(s)	1087
Psp6I	CCWGG	8 cut(s)	292, 417, 595, 772, 1245, 1438, 1777, 2237
PspEI	GGTNACC	1 cut(s)	811
PspGI	CCWGG	8 cut(s)	292, 417, 595, 772, 1245, 1438, 1777, 2237
PspN4I	GGNNCC	6 cut(s)	359, 658, 1139, 1488, 1692, 2014
PspOMI	GGGCCC	1 cut(s)	357
PspPI	GGNCC	6 cut(s)	164, 281, 357, 358, 973, 2013
PstI	CTGCAG	1 cut(s)	1864
PstNI	CAGNNNCTG	2 cut(s)	350, 1868
PsuI	RGATCY	5 cut(s)	8, 218, 320, 1137, 1921
PvuI	CGATCG	1 cut(s)	1283
PvuII	CAGCTG	3 cut(s)	631, 1271, 1865
RruI	TCGCGA	1 cut(s)	1279
RsaI	GTAC	9 cut(s)	19, 182, 250, 497, 561, 1009, 1342, 2055, 2181
RsaNI	GTAC	9 cut(s)	18, 181, 249, 496, 560, 1008, 1341, 2054, 2180
RseI	CAYNNNNRTG	3 cut(s)	888, 1215, 2295
SalI	GTCGAC	1 cut(s)	1652
SaqAI	TTAA	6 cut(s)	263, 1188, 1826, 1934, 2060, 2358
Sau96I	GGNCC	6 cut(s)	164, 281, 357, 358, 973, 2013
ScaI	AGTACT	2 cut(s)	250, 1342
SchI	GAGTC	2 cut(s)	1325, 2209
ScrFI	CCNGG	8 cut(s)	294, 419, 597, 774, 1247, 1440, 1779, 2239
SduI	GDGCHC	1 cut(s)	361
SfaNI	GCATC	6 cut(s)	61, 544, 1096, 1646, 2126, 2311
SfcI	CTRYAG	3 cut(s)	1860, 2086, 2175
SinI	GGWCC	1 cut(s)	281
SmiMI	CAYNNNNRTG	3 cut(s)	888, 1215, 2295
SmlI	CTYRAG	2 cut(s)	1095, 2059
SmoI	CTYRAG	2 cut(s)	1095, 2059
SnaBI	TACGTA	2 cut(s)	1403, 1718
SphI	GCATGC	1 cut(s)	1202
Sse9I	AATT	7 cut(s)	86, 411, 555, 908, 1383, 1506, 2129
SseBI	AGGCCT	2 cut(s)	1408, 1463
SsiI	CCGC	5 cut(s)	1609, 1682, 2101, 2308, 2376
SspI	AATATT	1 cut(s)	2190
SspMI	CTAG	5 cut(s)	546, 1503, 1622, 1755, 2280
StuI	AGGCCT	2 cut(s)	1408, 1463
StyD4I	CCNGG	8 cut(s)	292, 417, 595, 772, 1245, 1438, 1777, 2237
StyI	CCWWGG	2 cut(s)	1990, 2365
TaaI	ACNGT	3 cut(s)	1813, 1897, 2053
TaiI	ACGT	4 cut(s)	1056, 1090, 1405, 1720
TaqI	TCGA	6 cut(s)	234, 1283, 1558, 1653, 1984, 2335
TaqII	GACCGA	1 cut(s)	1084
TasI	AATT	7 cut(s)	86, 411, 555, 908, 1383, 1506, 2129
TatI	WGTACW	6 cut(s)	248, 495, 559, 1340, 2053, 2179
TauI	GCSGC	1 cut(s)	1612
TfiI	GAWTC	3 cut(s)	473, 634, 2396
Tru1I	TTAA	6 cut(s)	263, 1188, 1826, 1934, 2060, 2358
Tru9I	TTAA	6 cut(s)	263, 1188, 1826, 1934, 2060, 2358
TscAI	CASTG	1 cut(s)	2406
TseFI	GTSAC	3 cut(s)	75, 795, 1448
Tsp45I	GTSAC	3 cut(s)	75, 795, 1448
TspDTI	ATGAA	9 cut(s)	99, 330, 498, 701, 1011, 1953, 2142, 2184, 2402
TspGWI	ACGGA	2 cut(s)	381, 1808
TspRI	CASTG	1 cut(s)	2406
Vha464I	CTTAAG	1 cut(s)	2059
VpaK11BI	GGWCC	1 cut(s)	281
XagI	CCTNNNNNAGG	1 cut(s)	2111
XapI	RAATTY	4 cut(s)	86, 411, 1383, 2129
XceI	RCATGY	3 cut(s)	757, 1202, 1908
XmiI	GTMKAC	2 cut(s)	1653, 1846
XmnI	GAANNNNTTC	1 cut(s)	505
XspI	CTAG	5 cut(s)	546, 1503, 1622, 1755, 2280
ZrmI	AGTACT	2 cut(s)	250, 1342
Zsp2I	ATGCAT	2 cut(s)	1041, 1910

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.