Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0010360

Physical Location & Seq

Genomic Coordinates Forward (+)

56850808 .. 56855318

Gene Structure 4511 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0442800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2262 bp

ATGGCCGGCCAATTCTCCAGCTGCGTCGAGTACGGCCTCGGCCTCTCCAAGCGGATACTCTACGGCAAGGAGGCGGCTCCGGCTCCGTCGGCGATGTCGAGGTCGTCGTCCTGGTCGAGGCCGTCGACGGAGCAGGGGTACTTACCGGAGGCTCCGATGGTGTACGCGGTGGTGTCCGACCCGGAAATCGTGGACAATCCGGACATTCCGAGCTACCAGCCGTACGTCTACGGCCGGTGCGAGCCGCCGGCGTTGATACCTCTGCATATGCACGGCGTGGCTTTGGAGATTGAGAGCTATCTGGACACTGCGTTTGTGACCGTCACCGGAAATTGGCGCGTGCATTGTATTTCCACCGGAAAAAAGTGCGATTGCCGCGTGGCGGTGCCGATGGGCGAGAAGGGTTCACTTCTAGGTGTAGAGGTTGATGTCGCCGGAAGTTCGTATCGGACTCAACTGATCACCACAGAAGGCCAACCAGATAGTCGGAAAGTAGCCAAAGACGCGTACTTTCTGAAACGTCACATATACACCTTCAAAGTCCCACAGGTTGAAGGAGGCTCCTTCATTTCGCTGAAGATCAGATGGTCTCAGAAATTGTTATATCATGATGGAAAGTTCTGCCTCACTGTGCCTTTTAATTTTCCAGCATATGTTAATCCTGTTGGGAATAAAATTATGAAAGGGGAGAAGATTTCGTTGAGTGTGAATATGGGTGCTGAAGCAGAAGTTTTATGCCAAACTACAAGCCATCCTCTTAAGGTGGGAAGGCGCCAAAGCGGTAGATTGAGCTTCTCATATGAAGCACAGGTAGCAGCATGGTCAAGTGCAGACTTCAGCTTTTCATTTACCGTTAACACAAAGGATGTATATGGTGGTGTGTTCTTGCAATCTCCAACTCTTCGTGATTTTGATGACAGAGAGATGTTCTGCTTCTATTTGATCCCCAGGAATAGCCAGACTTGGAAGGTTTTCAAAAAGGAAGTTATATTTATCATTGATATAAGTGGAAGTATGGCGGGAGACCCTCTTGAGAATGCAAAGAGTGCAGTACTGGCATCGCTTTCTAATCTCAACCGGGAAGATACTTTCAACATAATAGCTTTCAATGGAGAGGTTCACGTATTCTCATCATCAATGGAGTTAGCAACAAATGAAGCATTACTGAAAGCTAAGAATTGGGTTAGCGCTGAACTTATTGCAGATGGTGGTACAAATATCTTACTTCCCCTAAGACAGGCTATGAAGTTGTTGGCCAAAACTGCTGATACAATTCCTTTCATTTTCCTCATTACTGATGGGGCTGTCGAAGATGAAAGAGAGATTTGCAATATGATGAAAGGATATCTGACAAGTGGGGGCGCAATATGTCCTCGAATATCTACTTTTGGCATAGGTTTATATTGTAATCATTACTTCCTGCAAATGCTAGCACAAATTGGCAGGGGCTATTATGATGCTGCTTACGATGGAGAGTCAATTGACTATAGAGTGCAAAGGCTATTCACAAGGGCATCATCAGTGACTCTTGCCAATATAACCGTGGACACTTTTGAACATCTCGATTCACTTGAGCTGTTTCCATCTAATATGCTGGATCTTTCATCTGGAAGTCCATTGATCATATCTGGCAGATATGAGGGAAGCTTTCCTCCCTCCATTAAAGTTAGCGGTACCTTGGCTGATATGAGCAACTTTGCCATAGACTTGAAAGTGCAAAGATCTAAGGATTTCCCACTTGATCGGGTGCTTGCGAAAAGGCATATTGACATGCGTACAGCTCATGCATGGTTGTTGGGAAGTAAAGAGCTTGAAGAGAAGGTCTCTAAAATGAGCAATCTAACCGGGGTCCCATCTGAGTACACTAGCATGACACTGAAGCAGACTGATAAAGGCAATAAAGCACTGGAATTAACTCGGACACAAGAGGTCTACAAAAAAGTTATTCAGCGGACCAAGTCGGAGTCAAATAGCCAGAAGGATATAATCCTTGGAAGCCTGGGTGTTGGCTTTGGTAACCTGGCTGCAACAGTCGAGAATAAAGCACCCGCTAGCGAAGAAGCAAAGCCTTCTGATGTTGCAGAAGTCTTGGTTAAGGCTGCTTCCACCTGCTGTACTAGACTACTTGATCGCATCTGTTGCATGTGTTTCATTAGGACTTGTACCCACGTTAATAACCAGTGCGCAATTTTTCTCACACAACTCTGCACTGCCCTTTGTTGTTGTGAGTGCTTAAATTGTTGCTTTGAACTATTTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000288 GO:0000290 GO:0000932 GO:0000956 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0012505 GO:0016043 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0019827 GO:0022607 GO:0022613 GO:0022618 GO:0032501 GO:0032502 GO:0032991 GO:0033962 GO:0034622 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0060255 GO:0065003 GO:0065007 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097159 GO:0098727 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

No domains found.

Protein Analysis

753

Amino Acids

83.14

Weight (kDa)

6.49

Isoelectric Point (pI)

38.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VWA_3	PF13768	328 - 486	5e-14	von Willebrand factor type A domain
VWA_2	PF13519	329 - 434	3.1e-12	von Willebrand factor type A domain
VWA	PF00092	329 - 443	4.1e-09	von Willebrand factor type A domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010360)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22270 AT4G14990 AT4G14990
fragaria_vesca	FvH4_6g39760 FvH4_6g39760
malus_domestica	MD09G1137000.v1.1 MD17G1127200.v1.1
prunus_persica	Prupe.3G188000_v2.0.a1
pyrus_communis	pycom09g05810 pycom17g11950
rosa_chinensis	RchiOBHm_Chr2g0153871
rosa_laevigata	RLG00000020735
rosa_multiflora	Rmu_sc0003887.1_g000011
rosa_roxburghii	Rroxscaffold_2G00094690
rosa_rugosa	Rorug02G0442800 Rorug02G0442900
rosa_samantha	Rh2AG506600 Rh2BG516600 Rh2CG492300 Rh2DG528700
rosa_wichuraiana	Rw2G041580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2117
Acc16I	TGCGCA	1 cut(s)	2185
Acc36I	ACCTGC	1 cut(s)	2117
Acc65I	GGTACC	1 cut(s)	1673
AccB1I	GGYRCC	3 cut(s)	385, 771, 1673
AccI	GTMKAC	3 cut(s)	125, 228, 1932
AccII	CGCG	4 cut(s)	167, 339, 378, 506
AccIII	TCCGGA	1 cut(s)	199
AclWI	GGATC	2 cut(s)	937, 1605
AcoI	YGGCCR	4 cut(s)	3, 7, 232, 1254
AcuI	CTGAAG	4 cut(s)	596, 741, 820, 1898
AcyI	GRCGYC	1 cut(s)	772
AdeI	CACNNNGTG	1 cut(s)	277
AfeI	AGCGCT	1 cut(s)	1189
AfiI	CCNNNNNNNGG	4 cut(s)	117, 333, 382, 1237
AflII	CTTAAG	1 cut(s)	758
AflIII	ACRYGT	1 cut(s)	504
AgsI	TTSAA	9 cut(s)	538, 554, 976, 1093, 1108, 1556, 1711, 1814, 2249
AjnI	CCWGG	4 cut(s)	110, 947, 1998, 2019
Alw26I	GTCTC	3 cut(s)	594, 1017, 1828
AlwI	GGATC	2 cut(s)	937, 1605
Aor13HI	TCCGGA	1 cut(s)	199
Aor51HI	AGCGCT	1 cut(s)	1189
AoxI	GGCC	8 cut(s)	3, 7, 34, 40, 119, 232, 472, 1254
ApeKI	GCWGC	5 cut(s)	21, 815, 1460, 2024, 2099
ArsI	GACNNNNNNTTYG	2 cut(s)	296, 328
Asp700I	GAANNNNTTC	1 cut(s)	971
Asp718I	GGTACC	1 cut(s)	1673
AspLEI	GCGC	5 cut(s)	339, 774, 1190, 1364, 2186
AspS9I	GGNCC	2 cut(s)	1849, 1953
AsuC2I	CCSGG	3 cut(s)	182, 1079, 1846
AsuHPI	GGTGA	2 cut(s)	316, 454
AsuNHI	GCTAGC	2 cut(s)	1429, 2051
AvaII	GGWCC	2 cut(s)	1849, 1953
BalI	TGGCCA	1 cut(s)	1256
BanI	GGYRCC	3 cut(s)	385, 771, 1673
BbvI	GCAGC	5 cut(s)	8, 827, 1447, 2011, 2086
BceAI	ACGGC	6 cut(s)	49, 79, 106, 205, 247, 289
BciT130I	CCWGG	4 cut(s)	112, 949, 2000, 2021
BciVI	GTATCC	1 cut(s)	48
BclI	TGATCA	2 cut(s)	459, 1620
BcnI	CCSGG	3 cut(s)	182, 1079, 1846
BcoDI	GTCTC	3 cut(s)	594, 1017, 1828
BfaI	CTAG	5 cut(s)	413, 1430, 1866, 2052, 2118
BfmI	CTRYAG	1 cut(s)	1486
BfoI	RGCGCY	2 cut(s)	775, 1191
BfrI	CTTAAG	1 cut(s)	758
BfuAI	ACCTGC	1 cut(s)	2117
BfuI	GTATCC	1 cut(s)	48
BglII	AGATCT	1 cut(s)	1721
BisI	GCNGC	8 cut(s)	22, 75, 245, 376, 816, 1461, 2025, 2100
BlsI	GCNGC	8 cut(s)	23, 76, 246, 377, 817, 1462, 2026, 2101
BmcAI	AGTACT	1 cut(s)	1053
Bme1390I	CCNGG	7 cut(s)	112, 182, 949, 1079, 1846, 2000, 2021
Bme18I	GGWCC	2 cut(s)	1849, 1953
BmgT120I	GGNCC	2 cut(s)	1849, 1953
BmiI	GGNNCC	9 cut(s)	78, 84, 153, 387, 562, 773, 1675, 1850, 1851
BmrFI	CCNGG	7 cut(s)	112, 182, 949, 1079, 1846, 2000, 2021
BmsI	GCATC	4 cut(s)	1067, 1447, 1523, 2142
BmtI	GCTAGC	2 cut(s)	1433, 2055
BplI	GAGNNNNNCTC	2 cut(s)	1808, 1840
BpuEI	CTTGAG	2 cut(s)	1052, 1592
BpuMI	CCSGG	3 cut(s)	182, 1079, 1846
BsaAI	YACGTR	1 cut(s)	1123
BsaHI	GRCGYC	1 cut(s)	772
BsaI	GGTCTC	3 cut(s)	594, 1017, 1828
BsaJI	CCNNGG	7 cut(s)	37, 947, 1542, 1677, 1845, 1990, 1999
BsaWI	WCCGGW	4 cut(s)	145, 199, 326, 356
BsaXI	ACNNNNNCTCC	2 cut(s)	122, 152
Bsc4I	CCNNNNNNNGG	4 cut(s)	117, 333, 382, 1237
Bse118I	RCCGGY	3 cut(s)	5, 234, 247
Bse1I	ACTGG	3 cut(s)	1059, 1911, 2179
BseAI	TCCGGA	1 cut(s)	199
BseBI	CCWGG	4 cut(s)	112, 949, 2000, 2021
BseDI	CCNNGG	7 cut(s)	37, 947, 1542, 1677, 1845, 1990, 1999
BseGI	GGATG	2 cut(s)	751, 871
BseLI	CCNNNNNNNGG	4 cut(s)	117, 333, 382, 1237
BseMII	CTCAG	2 cut(s)	605, 1848
BseNI	ACTGG	3 cut(s)	1059, 1911, 2179
BseX3I	CGGCCG	1 cut(s)	232
BseXI	GCAGC	5 cut(s)	8, 827, 1447, 2011, 2086
BsgI	GTGCAG	3 cut(s)	849, 1068, 2191
Bsh1236I	CGCG	4 cut(s)	167, 339, 378, 506
Bsh1285I	CGRYCG	1 cut(s)	235
BshFI	GGCC	8 cut(s)	5, 9, 36, 42, 121, 234, 474, 1256
BshNI	GGYRCC	3 cut(s)	385, 771, 1673
BsiEI	CGRYCG	1 cut(s)	235
BsiWI	CGTACG	1 cut(s)	222
BslFI	GGGAC	2 cut(s)	527, 1835
BslI	CCNNNNNNNGG	4 cut(s)	117, 333, 382, 1237
BsmAI	GTCTC	3 cut(s)	594, 1017, 1828
BsmFI	GGGAC	2 cut(s)	527, 1835
BsmI	GAATGC	1 cut(s)	1042
BsnI	GGCC	8 cut(s)	5, 9, 36, 42, 121, 234, 474, 1256
Bso31I	GGTCTC	3 cut(s)	594, 1017, 1828
Bsp13I	TCCGGA	1 cut(s)	199
Bsp143I	GATC	8 cut(s)	459, 579, 942, 1597, 1620, 1721, 1741, 2128
BspANI	GGCC	8 cut(s)	5, 9, 36, 42, 121, 234, 474, 1256
BspCNI	CTCAG	2 cut(s)	604, 1849
BspEI	TCCGGA	1 cut(s)	199
BspFNI	CGCG	4 cut(s)	167, 339, 378, 506
BspHI	TCATGA	1 cut(s)	607
BspLI	GGNNCC	9 cut(s)	78, 84, 153, 387, 562, 773, 1675, 1850, 1851
BspMI	ACCTGC	1 cut(s)	2117
BspOI	GCTAGC	2 cut(s)	1433, 2055
BspPI	GGATC	2 cut(s)	937, 1605
BspT107I	GGYRCC	3 cut(s)	385, 771, 1673
BspTI	CTTAAG	1 cut(s)	758
BspTNI	GGTCTC	3 cut(s)	594, 1017, 1828
BsrFI	RCCGGY	3 cut(s)	5, 234, 247
BsrI	ACTGG	3 cut(s)	1059, 1911, 2179
BssAI	RCCGGY	3 cut(s)	5, 234, 247
BssECI	CCNNGG	7 cut(s)	37, 947, 1542, 1677, 1845, 1990, 1999
BssMI	GATC	8 cut(s)	459, 579, 942, 1597, 1620, 1721, 1741, 2128
BssNI	GRCGYC	1 cut(s)	772
BssT1I	CCWWGG	2 cut(s)	1677, 1990
Bst2UI	CCWGG	4 cut(s)	112, 949, 2000, 2021
Bst4CI	ACNGT	5 cut(s)	322, 631, 853, 1543, 2032
Bst6I	CTCTTC	2 cut(s)	906, 1809
BstACI	GRCGYC	1 cut(s)	772
BstAFI	CTTAAG	1 cut(s)	758
BstAPI	GCANNNNNTGC	2 cut(s)	1046, 2139
BstBAI	YACGTR	1 cut(s)	1123
BstC8I	GCNNGC	7 cut(s)	7, 242, 249, 341, 1431, 1752, 2053
BstDEI	CTNAG	5 cut(s)	591, 1173, 1232, 1725, 1857
BstDSI	CCRYGG	1 cut(s)	1542
BstEII	GGTNACC	1 cut(s)	2015
BstENI	CCTNNNNNAGG	2 cut(s)	115, 1235
BstF5I	GGATG	2 cut(s)	751, 871
BstFNI	CGCG	4 cut(s)	167, 339, 378, 506
BstH2I	RGCGCY	2 cut(s)	775, 1191
BstHHI	GCGC	5 cut(s)	339, 774, 1190, 1364, 2186
BstKTI	GATC	8 cut(s)	462, 582, 945, 1600, 1623, 1724, 1744, 2131
BstMAI	GTCTC	3 cut(s)	594, 1017, 1828
BstMBI	GATC	8 cut(s)	459, 579, 942, 1597, 1620, 1721, 1741, 2128
BstMCI	CGRYCG	1 cut(s)	235
BstMWI	GCNNNNNNNGC	9 cut(s)	80, 89, 375, 503, 812, 1046, 1055, 1262, 2139
BstNI	CCWGG	4 cut(s)	112, 949, 2000, 2021
BstNSI	RCATGY	2 cut(s)	1774, 2146
BstPI	GGTNACC	1 cut(s)	2015
BstSCI	CCNGG	7 cut(s)	110, 180, 947, 1077, 1844, 1998, 2019
BstSFI	CTRYAG	1 cut(s)	1486
BstUI	CGCG	4 cut(s)	167, 339, 378, 506
BstV1I	GCAGC	5 cut(s)	8, 827, 1447, 2011, 2086
BstX2I	RGATCY	2 cut(s)	1597, 1721
BstYI	RGATCY	2 cut(s)	1597, 1721
BstZI	CGGCCG	1 cut(s)	232
BsuI	GTATCC	1 cut(s)	48
BsuRI	GGCC	8 cut(s)	5, 9, 36, 42, 121, 234, 474, 1256
BtgI	CCRYGG	1 cut(s)	1542
BtgZI	GCGATG	2 cut(s)	107, 1044
BtsCI	GGATG	2 cut(s)	751, 871
BtsI	GCAGTG	2 cut(s)	306, 2208
BtsIMutI	CAGTG	7 cut(s)	306, 627, 1527, 1874, 1904, 2186, 2208
BveI	ACCTGC	1 cut(s)	2117
Cac8I	GCNNGC	7 cut(s)	7, 242, 249, 341, 1431, 1752, 2053
CciI	TCATGA	1 cut(s)	607
CfoI	GCGC	5 cut(s)	339, 774, 1190, 1364, 2186
Cfr10I	RCCGGY	3 cut(s)	5, 234, 247
Cfr13I	GGNCC	2 cut(s)	1849, 1953
CseI	GACGC	2 cut(s)	13, 512
CviAII	CATG	7 cut(s)	608, 819, 1771, 1784, 1788, 1870, 2143
DdeI	CTNAG	5 cut(s)	591, 1173, 1232, 1725, 1857
DinI	GGCGCC	1 cut(s)	773
DpnI	GATC	8 cut(s)	461, 581, 944, 1599, 1622, 1723, 1743, 2130
DpnII	GATC	8 cut(s)	459, 579, 942, 1597, 1620, 1721, 1741, 2128
DraIII	CACNNNGTG	1 cut(s)	277
EaeI	YGGCCR	4 cut(s)	3, 7, 232, 1254
EagI	CGGCCG	1 cut(s)	232
Eam1104I	CTCTTC	2 cut(s)	906, 1809
EarI	CTCTTC	2 cut(s)	906, 1809
EclXI	CGGCCG	1 cut(s)	232
Eco130I	CCWWGG	2 cut(s)	1677, 1990
Eco31I	GGTCTC	3 cut(s)	594, 1017, 1828
Eco32I	GATATC	1 cut(s)	1346
Eco47I	GGWCC	2 cut(s)	1849, 1953
Eco47III	AGCGCT	1 cut(s)	1189
Eco52I	CGGCCG	1 cut(s)	232
Eco57I	CTGAAG	4 cut(s)	596, 741, 820, 1898
Eco91I	GGTNACC	1 cut(s)	2015
EcoNI	CCTNNNNNAGG	2 cut(s)	115, 1235
EcoO109I	RGGNCCY	1 cut(s)	1849
EcoO65I	GGTNACC	1 cut(s)	2015
EcoRII	CCWGG	4 cut(s)	110, 947, 1998, 2019
EcoRV	GATATC	1 cut(s)	1346
EcoT14I	CCWWGG	2 cut(s)	1677, 1990
EcoT22I	ATGCAT	1 cut(s)	1789
EgeI	GGCGCC	1 cut(s)	773
EheI	GGCGCC	1 cut(s)	773
ErhI	CCWWGG	2 cut(s)	1677, 1990
FaeI	CATG	7 cut(s)	611, 822, 1774, 1787, 1791, 1873, 2146
FaqI	GGGAC	2 cut(s)	527, 1835
FatI	CATG	7 cut(s)	607, 818, 1770, 1783, 1787, 1869, 2142
FauI	CCCGC	2 cut(s)	1012, 2056
FauNDI	CATATG	3 cut(s)	267, 652, 799
FbaI	TGATCA	2 cut(s)	459, 1620
FblI	GTMKAC	3 cut(s)	125, 228, 1932
Fnu4HI	GCNGC	8 cut(s)	22, 75, 245, 376, 816, 1461, 2025, 2100
FokI	GGATG	2 cut(s)	738, 878
FseI	GGCCGGCC	1 cut(s)	9
Fsp4HI	GCNGC	8 cut(s)	22, 75, 245, 376, 816, 1461, 2025, 2100
FspBI	CTAG	5 cut(s)	413, 1430, 1866, 2052, 2118
FspI	TGCGCA	1 cut(s)	2185
GlaI	GCGC	5 cut(s)	338, 773, 1189, 1363, 2185
GluI	GCNGC	8 cut(s)	22, 75, 245, 376, 816, 1461, 2025, 2100
HaeII	RGCGCY	2 cut(s)	775, 1191
HaeIII	GGCC	8 cut(s)	5, 9, 36, 42, 121, 234, 474, 1256
HgaI	GACGC	2 cut(s)	13, 512
HhaI	GCGC	5 cut(s)	339, 774, 1190, 1364, 2186
Hin1I	GRCGYC	1 cut(s)	772
Hin1II	CATG	7 cut(s)	611, 822, 1774, 1787, 1791, 1873, 2146
Hin6I	GCGC	5 cut(s)	337, 772, 1188, 1362, 2184
HinP1I	GCGC	5 cut(s)	337, 772, 1188, 1362, 2184
HincII	GTYRAC	2 cut(s)	126, 856
HindII	GTYRAC	2 cut(s)	126, 856
HindIII	AAGCTT	1 cut(s)	1645
HinfI	GANTC	5 cut(s)	451, 1475, 1525, 1565, 1964
HpaI	GTTAAC	1 cut(s)	856
HphI	GGTGA	2 cut(s)	316, 454
Hpy188III	TCNNGA	9 cut(s)	200, 302, 608, 905, 1031, 1562, 1608, 2035, 2259
Hpy99I	CGWCG	5 cut(s)	29, 91, 109, 127, 130
HpyCH4III	ACNGT	5 cut(s)	322, 631, 853, 1543, 2032
HpyCH4IV	ACGT	4 cut(s)	225, 520, 1122, 2169
HpyF10VI	GCNNNNNNNGC	9 cut(s)	80, 89, 375, 503, 812, 1046, 1055, 1262, 2139
HpyF3I	CTNAG	5 cut(s)	591, 1173, 1232, 1725, 1857
HpySE526I	ACGT	4 cut(s)	225, 520, 1122, 2169
Hsp92I	GRCGYC	1 cut(s)	772
Hsp92II	CATG	7 cut(s)	611, 822, 1774, 1787, 1791, 1873, 2146
HspAI	GCGC	5 cut(s)	337, 772, 1188, 1362, 2184
KasI	GGCGCC	1 cut(s)	771
KflI	GGGWCCC	1 cut(s)	1849
Kpn2I	TCCGGA	1 cut(s)	199
KpnI	GGTACC	1 cut(s)	1677
KroI	GCCGGC	2 cut(s)	5, 247
KroNI	GCCGGC	2 cut(s)	7, 249
Ksp22I	TGATCA	2 cut(s)	459, 1620
KspAI	GTTAAC	1 cut(s)	856
Kzo9I	GATC	8 cut(s)	459, 579, 942, 1597, 1620, 1721, 1741, 2128
LmnI	GCTCC	5 cut(s)	82, 88, 130, 157, 566
Lsp1109I	GCAGC	5 cut(s)	8, 827, 1447, 2011, 2086
LweI	GCATC	4 cut(s)	1067, 1447, 1523, 2142
MaeI	CTAG	5 cut(s)	413, 1430, 1866, 2052, 2118
MaeII	ACGT	4 cut(s)	225, 520, 1122, 2169
MaeIII	GTNAC	5 cut(s)	316, 322, 521, 1522, 2015
MalI	GATC	8 cut(s)	461, 581, 944, 1599, 1622, 1723, 1743, 2130
MboI	GATC	8 cut(s)	459, 579, 942, 1597, 1620, 1721, 1741, 2128
MboII	GAAGA	7 cut(s)	589, 703, 893, 1094, 1322, 1826, 2069
MfeI	CAATTG	1 cut(s)	1479
MflI	RGATCY	2 cut(s)	1597, 1721
MlsI	TGGCCA	1 cut(s)	1256
MluI	ACGCGT	1 cut(s)	504
MluNI	TGGCCA	1 cut(s)	1256
Mly113I	GGCGCC	1 cut(s)	772
MlyI	GAGTC	4 cut(s)	445, 1484, 1519, 1973
MmeI	TCCRAC	4 cut(s)	201, 467, 920, 1941
Mox20I	TGGCCA	1 cut(s)	1256
Mph1103I	ATGCAT	1 cut(s)	1789
MreI	CGCCGGCG	1 cut(s)	247
MroI	TCCGGA	1 cut(s)	199
MroNI	GCCGGC	2 cut(s)	5, 247
MroXI	GAANNNNTTC	1 cut(s)	971
MscI	TGGCCA	1 cut(s)	1256
MseI	TTAA	9 cut(s)	639, 657, 759, 855, 1662, 1913, 2094, 2172, 2234
MslI	CAYNNNNRTG	1 cut(s)	1868
Msp20I	TGGCCA	1 cut(s)	1256
MspA1I	CMGCKG	2 cut(s)	21, 1951
MspCI	CTTAAG	1 cut(s)	758
MspR9I	CCNGG	7 cut(s)	112, 182, 949, 1079, 1846, 2000, 2021
MunI	CAATTG	1 cut(s)	1479
Mva1269I	GAATGC	1 cut(s)	1042
MvaI	CCWGG	4 cut(s)	112, 949, 2000, 2021
MvnI	CGCG	4 cut(s)	167, 339, 378, 506
MwoI	GCNNNNNNNGC	9 cut(s)	80, 89, 375, 503, 812, 1046, 1055, 1262, 2139
NaeI	GCCGGC	2 cut(s)	7, 249
NarI	GGCGCC	1 cut(s)	772
NciI	CCSGG	3 cut(s)	182, 1079, 1846
NdeI	CATATG	3 cut(s)	267, 652, 799
NdeII	GATC	8 cut(s)	459, 579, 942, 1597, 1620, 1721, 1741, 2128
NgoMIV	GCCGGC	2 cut(s)	5, 247
NheI	GCTAGC	2 cut(s)	1429, 2051
NlaIII	CATG	7 cut(s)	611, 822, 1774, 1787, 1791, 1873, 2146
NlaIV	GGNNCC	9 cut(s)	78, 84, 153, 387, 562, 773, 1675, 1850, 1851
NmeAIII	GCCGAG	1 cut(s)	18
NmuCI	GTSAC	4 cut(s)	316, 322, 521, 1522
NsbI	TGCGCA	1 cut(s)	2185
NsiI	ATGCAT	1 cut(s)	1789
NspI	RCATGY	2 cut(s)	1774, 2146
PagI	TCATGA	1 cut(s)	607
PaqCI	CACCTGC	1 cut(s)	2117
PcsI	WCGNNNNNNNCGW	5 cut(s)	95, 104, 113, 122, 237
PctI	GAATGC	1 cut(s)	1042
PdiI	GCCGGC	2 cut(s)	7, 249
PdmI	GAANNNNTTC	1 cut(s)	971
PfeI	GAWTC	1 cut(s)	1565
Pfl23II	CGTACG	1 cut(s)	222
PflFI	GACNNNGTC	1 cut(s)	1957
PkrI	GCNGC	8 cut(s)	23, 76, 246, 377, 817, 1462, 2026, 2101
PleI	GAGTC	4 cut(s)	445, 1483, 1519, 1972
PluTI	GGCGCC	1 cut(s)	775
PpsI	GAGTC	4 cut(s)	445, 1483, 1519, 1972
Ppu21I	YACGTR	1 cut(s)	1123
PpuMI	RGGWCCY	1 cut(s)	1849
Psp5II	RGGWCCY	1 cut(s)	1849
Psp6I	CCWGG	4 cut(s)	110, 947, 1998, 2019
PspEI	GGTNACC	1 cut(s)	2015
PspGI	CCWGG	4 cut(s)	110, 947, 1998, 2019
PspLI	CGTACG	1 cut(s)	222
PspN4I	GGNNCC	9 cut(s)	78, 84, 153, 387, 562, 773, 1675, 1850, 1851
PspPI	GGNCC	2 cut(s)	1849, 1953
PspPPI	RGGWCCY	1 cut(s)	1849
PsuI	RGATCY	2 cut(s)	1597, 1721
PsyI	GACNNNGTC	1 cut(s)	1957
PvuII	CAGCTG	1 cut(s)	21
RigI	GGCCGGCC	1 cut(s)	9
RseI	CAYNNNNRTG	1 cut(s)	1868
SalI	GTCGAC	1 cut(s)	124
SaqAI	TTAA	9 cut(s)	639, 657, 759, 855, 1662, 1913, 2094, 2172, 2234
SatI	GCNGC	8 cut(s)	22, 75, 245, 376, 816, 1461, 2025, 2100
Sau3AI	GATC	8 cut(s)	459, 579, 942, 1597, 1620, 1721, 1741, 2128
Sau96I	GGNCC	2 cut(s)	1849, 1953
ScaI	AGTACT	1 cut(s)	1053
SchI	GAGTC	4 cut(s)	445, 1484, 1519, 1973
ScrFI	CCNGG	7 cut(s)	112, 182, 949, 1079, 1846, 2000, 2021
SfaNI	GCATC	4 cut(s)	1067, 1447, 1523, 2142
SfcI	CTRYAG	1 cut(s)	1486
SfoI	GGCGCC	1 cut(s)	773
SgrAI	CRCCGGYG	1 cut(s)	247
SgrDI	CGTCGACG	1 cut(s)	124
SinI	GGWCC	2 cut(s)	1849, 1953
SmiMI	CAYNNNNRTG	1 cut(s)	1868
SmlI	CTYRAG	3 cut(s)	758, 1031, 1571
SmoI	CTYRAG	3 cut(s)	758, 1031, 1571
SspDI	GGCGCC	1 cut(s)	771
SspMI	CTAG	5 cut(s)	413, 1430, 1866, 2052, 2118
StyD4I	CCNGG	7 cut(s)	110, 180, 947, 1077, 1844, 1998, 2019
StyI	CCWWGG	2 cut(s)	1677, 1990
TaaI	ACNGT	5 cut(s)	322, 631, 853, 1543, 2032
TaiI	ACGT	4 cut(s)	228, 523, 1125, 2172
TaqI	TCGA	8 cut(s)	27, 98, 116, 125, 1308, 1375, 1563, 2034
TatI	WGTACW	3 cut(s)	1051, 1860, 2114
TauI	GCSGC	3 cut(s)	77, 247, 378
TfiI	GAWTC	1 cut(s)	1565
Tru1I	TTAA	9 cut(s)	639, 657, 759, 855, 1662, 1913, 2094, 2172, 2234
Tru9I	TTAA	9 cut(s)	639, 657, 759, 855, 1662, 1913, 2094, 2172, 2234
TscAI	CASTG	7 cut(s)	313, 634, 1527, 1881, 1911, 2186, 2215
TseFI	GTSAC	4 cut(s)	316, 322, 521, 1522
TseI	GCWGC	5 cut(s)	21, 815, 1460, 2024, 2099
Tsp45I	GTSAC	4 cut(s)	316, 322, 521, 1522
TspGWI	ACGGA	2 cut(s)	75, 143
TspRI	CASTG	7 cut(s)	313, 634, 1527, 1881, 1911, 2186, 2215
Tth111I	GACNNNGTC	1 cut(s)	1957
Vha464I	CTTAAG	1 cut(s)	758
VpaK11BI	GGWCC	2 cut(s)	1849, 1953
XagI	CCTNNNNNAGG	2 cut(s)	115, 1235
XceI	RCATGY	2 cut(s)	1774, 2146
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1540
XmiI	GTMKAC	3 cut(s)	125, 228, 1932
XmnI	GAANNNNTTC	1 cut(s)	971
XspI	CTAG	5 cut(s)	413, 1430, 1866, 2052, 2118
ZrmI	AGTACT	1 cut(s)	1053
Zsp2I	ATGCAT	1 cut(s)	1789

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.