Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0010360

Physical Location & Seq

Genomic Coordinates Forward (+)

72482663 .. 72489288

Gene Structure 6626 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG516600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2178 bp

ATGCTTTTATTTAACGGCAAGTTCTCATCAGGTTCATCTGCTACTGATTGGGCCCAAGATGGAGATTTTGGTAACTGGTTGGACCAGCAGATGTTTGATACAGACAATTCTCTGGACGGAAAAAGATGGTCATCACAGCCACAATCGTCCGCTCGTTATCCAGAATCAAAACCTTTGCAGAGAACATCCTCATACCCTGAGCAGCCACCTGTCCTACAGCACTACTCCAGTGAACCAATTATAGTACCCAAATCAGCATATACCTCATTCCCTCCCCCTGGAAATAGGTCCCAGGGGGGATCACCACAGCATCTGAGTCTTTCTACTCTATCTGGTGCTTCTCAGTCGCCTTTTTCTTCATCAAATCTTTCTTCTTTATCTAACTCTAATCTTCATCTGGCTGGTGGTTTACCTCATGGGTTGCATTATGGAGCGAACATGCCTCAGTTCACCAACCCCGCCCTTTCATTCAATAGCAGGTCACAAAATCATTGGGTCAACCATGCTGGAGTACTGCATGGGGATCATTCCAACCTCTTAAACAATATATTGCAGCAACAGCTACCTCATCAAAATGGACTTTTGTCCCCACAGTTATTGTCAGCTCAGCAGCAGCTACAACAGCAGAGATTGCACCGTCCAGTTCCGCCATCTTTGGCCCATTTTGCAGCAATGCAGTCCCAACTATATAATACCCATCCTTCTCCCTCACACAAGCCAATGCATGGATTGCCTGACATAAGAGAGCATAGACCTAAACATCGAGGCAAACACAATCGGTTTTCTCAAGGCTCTGATGCTGGTAGTCAGAAAAGTGATAGTGGGTGGATCCAGTTCCGATCTAAGCATATGACTTCCGAAGAGATAGAGAGTATTCTCAAAATGCAGCATGCTGCAACACATAGCAATGACCCCTACATAGATGATTATTACCACCAGGCAAGTCTTTCCAAAAAAGCCACTGGATCGAGGTCAAAACAGCCTTTCTGCCCATCTCATCTGAGAGAGTTCTCTTCCAGAGGTCGTAATAGTAGTGATCAGCATTCTCATTCTTCTGTTGATGCTCTCGGGAGGATTCCTCTGTCTTCTATCCGTAGACCACGTCCCCTCCTTGAAGTCGATCCCCCTCCTGGTGAGGGGAATTCTGAACATGCCTCTGAGAAGCCTTTGGAACAGGAACCAATGCTTGCTGCTAGAATAACCATTGAAGATGGCCTTTGTCTCCTTCTGGATGTTGATGATATTGATCGACTTATACAATGCGGTCAGCCCCAAGACGGTGGAGTTCAACTTAGGCGAAGGCGGCAAATGCTGCTGGAAGGGTTGGCAGCGTCACTTCAGCTTGTGGATCCACTTGGGAAAGGCAGCCATGCAGTTGGGTTGTCTTCAAAGGATGACCTCGTGTTCCTAAGGTTGGTGGCTCTTCCTAAAGGCCGAAAGCTCCTTTCTAGGTTTATCCAGCTTCTTTTCCCTGGTAGTGAGCTAGCCCGTATTGTGTGCATGACTGTATTCCGTCATTTAAGATTTTTGTTTGGAGGTCTCCCATCTGATCCTGCAGCTGCTGATACAACTACCAGTCTTGCAAAGACGGTTTCTGCATGTATTAATGGTATGGATCTTCGTGCTCTAAGTGCTTGTCTTGTTGCGGTCGTTTGTTCATCAGAGCAGCCACCTCTTCGTCCCCTTGGAAGCCCTGCTGGTGATGGGGCCGCTATTATATTGAAATCTGTTCTTGAAAGGGCAACTGAACTCTTAACTGACCCTCATGCTGTTGGGAACTGTAGTGTTTCTAATCGTGCCCTCTGGCAGGCTTCCTTCGATGAATTCTTTGGTCTTCTTACCAAGTACTGTCTGACTAAATATGAAACTATTGTGCAATCAATATTTACACAGTCCCAGCAAAGCACAGAAGTTATTGGTGCAGAGGCCACCAAAGCAATACACCGGGAAATGCCTGTGGAGCTTCTACGTGCCAGTCTTCCTCATACGAATGAGCACCAAAGGAAGCTTTTGTCAGATTTTGCTCATCGATCCATGCCCATTTCTGGTCTTAATGCCCATGGTGGCAGTGGTCAAATGAACTCGGAATCGGGGAATGTGAATCTGCTTTACAGTGGAGGGGGTGCTCATCTCTGGGGAGTGCAAGGGTACTGCATCCCCATCGAAGTAATTTTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000288 GO:0000290 GO:0000932 GO:0000956 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0012505 GO:0016043 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0019827 GO:0022607 GO:0022613 GO:0022618 GO:0032501 GO:0032502 GO:0032991 GO:0033962 GO:0034622 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0060255 GO:0065003 GO:0065007 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097159 GO:0098727 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

No domains found.

Protein Analysis

725

Amino Acids

79.31

Weight (kDa)

8.04

Isoelectric Point (pI)

61.37

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010360)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22270 AT4G14990 AT4G14990
fragaria_vesca	FvH4_6g39760 FvH4_6g39760
malus_domestica	MD09G1137000.v1.1 MD17G1127200.v1.1
prunus_persica	Prupe.3G188000_v2.0.a1
pyrus_communis	pycom09g05810 pycom17g11950
rosa_chinensis	RchiOBHm_Chr2g0153871
rosa_laevigata	RLG00000020735
rosa_multiflora	Rmu_sc0003887.1_g000011
rosa_roxburghii	Rroxscaffold_2G00094690
rosa_rugosa	Rorug02G0442800 Rorug02G0442900
rosa_samantha	Rh2AG506600 Rh2BG516600 Rh2CG492300 Rh2DG528700
rosa_wichuraiana	Rw2G041580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2176
Acc36I	ACCTGC	1 cut(s)	468
AccB7I	CCANNNNNTGG	1 cut(s)	725
AccBSI	CCGCTC	1 cut(s)	152
AccI	GTMKAC	1 cut(s)	1096
AciI	CCGC	7 cut(s)	150, 459, 647, 1263, 1303, 1646, 1710
AcsI	RAATTY	2 cut(s)	1141, 1823
AcuI	CTGAAG	1 cut(s)	1322
AfaI	GTAC	4 cut(s)	246, 513, 1847, 2150
AfiI	CCNNNNNNNGG	8 cut(s)	278, 725, 1130, 1136, 1277, 1414, 1807, 2045
AgsI	TTSAA	7 cut(s)	472, 1115, 1208, 1289, 1389, 1723, 1736
AjiI	CACGTC	1 cut(s)	1103
AjnI	CCWGG	5 cut(s)	277, 291, 936, 1129, 1471
Alw21I	GWGCWC	3 cut(s)	1627, 1998, 2128
Alw26I	GTCTC	2 cut(s)	1226, 1544
AlwNI	CAGNNNCTG	2 cut(s)	313, 1562
Ama87I	CYCGRG	1 cut(s)	1067
AoxI	GGCC	6 cut(s)	51, 657, 1213, 1432, 1707, 1926
ApaI	GGGCCC	1 cut(s)	55
ApoI	RAATTY	2 cut(s)	1141, 1823
AseI	ATTAAT	1 cut(s)	1605
AspS9I	GGNCC	6 cut(s)	51, 52, 82, 288, 658, 1707
AsuC2I	CCSGG	1 cut(s)	1946
AsuHPI	GGTGA	4 cut(s)	294, 442, 1145, 1712
AsuNHI	GCTAGC	1 cut(s)	1483
AvaI	CYCGRG	1 cut(s)	1067
AvaII	GGWCC	2 cut(s)	82, 288
AxyI	CCTNAGG	1 cut(s)	1409
BaeGI	GKGCMC	2 cut(s)	55, 1801
BamHI	GGATCC	2 cut(s)	828, 1348
BanII	GRGCYC	1 cut(s)	55
BauI	CACGAG	1 cut(s)	1400
BbsI	GAAGAC	4 cut(s)	1077, 1377, 1826, 1970
Bbv12I	GWGCWC	3 cut(s)	1627, 1998, 2128
BccI	CCATC	9 cut(s)	53, 120, 658, 705, 1000, 1205, 1552, 1697, 2168
BceAI	ACGGC	1 cut(s)	31
BcgI	CGANNNNNNTGC	2 cut(s)	2143, 2177
BciT130I	CCWGG	5 cut(s)	279, 293, 938, 1131, 1473
BclI	TGATCA	1 cut(s)	1036
BcnI	CCSGG	1 cut(s)	1946
BcoDI	GTCTC	2 cut(s)	1226, 1544
BfaI	CTAG	3 cut(s)	1194, 1449, 1484
BfmI	CTRYAG	3 cut(s)	215, 1554, 1780
BfuAI	ACCTGC	1 cut(s)	468
BlpI	GCTNAGC	1 cut(s)	606
BmcAI	AGTACT	2 cut(s)	513, 1847
Bme1390I	CCNGG	6 cut(s)	279, 293, 938, 1131, 1473, 1946
Bme18I	GGWCC	2 cut(s)	82, 288
BmeT110I	CYCGRG	1 cut(s)	1067
BmgBI	CACGTC	1 cut(s)	1103
BmgT120I	GGNCC	6 cut(s)	51, 52, 82, 288, 658, 1707
BmiI	GGNNCC	6 cut(s)	53, 290, 830, 1179, 1350, 1708
BmrFI	CCNGG	6 cut(s)	279, 293, 938, 1131, 1473, 1946
BmsI	GCATC	4 cut(s)	319, 787, 1051, 2163
BmtI	GCTAGC	1 cut(s)	1487
BoxI	GACNNNNGTC	1 cut(s)	583
BpiI	GAAGAC	4 cut(s)	1077, 1377, 1826, 1970
BplI	GAGNNNNNCTC	2 cut(s)	1063, 1095
BpmI	CTGGAG	2 cut(s)	211, 528
Bpu10I	CCTNAGC	1 cut(s)	198
Bpu1102I	GCTNAGC	1 cut(s)	606
BpuEI	CTTGAG	1 cut(s)	771
BpuMI	CCSGG	1 cut(s)	1946
Bsa29I	ATCGAT	1 cut(s)	2029
BsaAI	YACGTR	1 cut(s)	1970
BsaBI	GATNNNNATC	2 cut(s)	130, 1245
BsaI	GGTCTC	1 cut(s)	1544
BsaJI	CCNNGG	6 cut(s)	277, 291, 292, 1471, 1684, 2059
BsaXI	ACNNNNNCTCC	2 cut(s)	1092, 1122
Bsc4I	CCNNNNNNNGG	8 cut(s)	278, 725, 1130, 1136, 1277, 1414, 1807, 2045
Bse1I	ACTGG	7 cut(s)	80, 228, 641, 832, 967, 1575, 1974
Bse21I	CCTNAGG	1 cut(s)	1409
Bse3DI	GCAATG	2 cut(s)	678, 913
Bse8I	GATNNNNATC	2 cut(s)	130, 1245
BseBI	CCWGG	5 cut(s)	279, 293, 938, 1131, 1473
BseCI	ATCGAT	1 cut(s)	2029
BseDI	CCNNGG	6 cut(s)	277, 291, 292, 1471, 1684, 2059
BseGI	GGATG	5 cut(s)	185, 697, 1237, 1399, 2154
BseJI	GATNNNNATC	2 cut(s)	130, 1245
BseLI	CCNNNNNNNGG	8 cut(s)	278, 725, 1130, 1136, 1277, 1414, 1807, 2045
BseMI	GCAATG	2 cut(s)	678, 913
BseMII	CTCAG	7 cut(s)	189, 305, 356, 458, 620, 992, 1149
BseNI	ACTGG	7 cut(s)	80, 228, 641, 832, 967, 1575, 1974
BseSI	GKGCMC	2 cut(s)	55, 1801
BseYI	CCCAGC	1 cut(s)	1896
BsgI	GTGCAG	1 cut(s)	1941
Bsh1285I	CGRYCG	1 cut(s)	1650
BshFI	GGCC	6 cut(s)	53, 659, 1215, 1434, 1709, 1928
BshVI	ATCGAT	1 cut(s)	2029
BsiEI	CGRYCG	1 cut(s)	1650
BsiHKAI	GWGCWC	3 cut(s)	1627, 1998, 2128
BsiHKCI	CYCGRG	1 cut(s)	1067
BsiSI	CCGG	1 cut(s)	1945
BslFI	GGGAC	6 cut(s)	274, 571, 664, 1089, 1665, 1879
BslI	CCNNNNNNNGG	8 cut(s)	278, 725, 1130, 1136, 1277, 1414, 1807, 2045
BsmAI	GTCTC	2 cut(s)	1226, 1544
BsmFI	GGGAC	6 cut(s)	274, 571, 664, 1089, 1665, 1879
BsmI	GAATGC	1 cut(s)	1042
BsnI	GGCC	6 cut(s)	53, 659, 1215, 1434, 1709, 1928
Bso31I	GGTCTC	1 cut(s)	1544
BsoBI	CYCGRG	1 cut(s)	1067
Bsp120I	GGGCCC	1 cut(s)	51
Bsp1286I	GDGCHC	5 cut(s)	55, 1627, 1801, 1998, 2128
Bsp1720I	GCTNAGC	1 cut(s)	606
Bsp19I	CCATGG	1 cut(s)	2059
BspACI	CCGC	7 cut(s)	150, 459, 647, 1263, 1303, 1646, 1710
BspANI	GGCC	6 cut(s)	53, 659, 1215, 1434, 1709, 1928
BspCNI	CTCAG	7 cut(s)	190, 306, 355, 457, 619, 993, 1150
BspDI	ATCGAT	1 cut(s)	2029
BspLI	GGNNCC	6 cut(s)	53, 290, 830, 1179, 1350, 1708
BspMAI	CTGCAG	1 cut(s)	1558
BspMI	ACCTGC	1 cut(s)	468
BspOI	GCTAGC	1 cut(s)	1487
BspQI	GCTCTTC	1 cut(s)	1428
BspTNI	GGTCTC	1 cut(s)	1544
BsrBI	CCGCTC	1 cut(s)	152
BsrDI	GCAATG	2 cut(s)	678, 913
BsrI	ACTGG	7 cut(s)	80, 228, 641, 832, 967, 1575, 1974
BssECI	CCNNGG	6 cut(s)	277, 291, 292, 1471, 1684, 2059
BssSI	CACGAG	1 cut(s)	1400
BssT1I	CCWWGG	2 cut(s)	1684, 2059
Bst2BI	CACGAG	1 cut(s)	1400
Bst2UI	CCWGG	5 cut(s)	279, 293, 938, 1131, 1473
Bst4CI	ACNGT	9 cut(s)	594, 638, 1280, 1507, 1591, 1781, 1850, 1893, 2114
Bst6I	CTCTTC	4 cut(s)	855, 1018, 1428, 1680
BstAPI	GCANNNNNTGC	3 cut(s)	631, 730, 1312
BstBAI	YACGTR	1 cut(s)	1970
BstC8I	GCNNGC	4 cut(s)	891, 1188, 1485, 1809
BstDSI	CCRYGG	1 cut(s)	2059
BstENI	CCTNNNNNAGG	1 cut(s)	1805
BstF5I	GGATG	5 cut(s)	185, 697, 1237, 1399, 2154
BstMAI	GTCTC	2 cut(s)	1226, 1544
BstMCI	CGRYCG	1 cut(s)	1650
BstNI	CCWGG	5 cut(s)	279, 293, 938, 1131, 1473
BstNSI	RCATGY	4 cut(s)	442, 893, 1154, 1602
BstPAI	GACNNNNGTC	1 cut(s)	583
BstSCI	CCNGG	6 cut(s)	277, 291, 936, 1129, 1471, 1944
BstSFI	CTRYAG	3 cut(s)	215, 1554, 1780
BstSLI	GKGCMC	2 cut(s)	55, 1801
BstV2I	GAAGAC	4 cut(s)	1077, 1377, 1826, 1970
BstX2I	RGATCY	3 cut(s)	828, 1348, 1615
BstXI	CCANNNNNNTGG	2 cut(s)	1280, 1376
BstYI	RGATCY	3 cut(s)	828, 1348, 1615
Bsu15I	ATCGAT	1 cut(s)	2029
Bsu36I	CCTNAGG	1 cut(s)	1409
BsuRI	GGCC	6 cut(s)	53, 659, 1215, 1434, 1709, 1928
BsuTUI	ATCGAT	1 cut(s)	2029
BtgI	CCRYGG	1 cut(s)	2059
BtrI	CACGTC	1 cut(s)	1103
BtsCI	GGATG	5 cut(s)	185, 697, 1237, 1399, 2154
BtsI	GCAGTG	1 cut(s)	2074
BtsIMutI	CAGTG	4 cut(s)	235, 960, 2074, 2119
BveI	ACCTGC	1 cut(s)	468
Cac8I	GCNNGC	4 cut(s)	891, 1188, 1485, 1809
CaiI	CAGNNNCTG	2 cut(s)	313, 1562
Cfr13I	GGNCC	6 cut(s)	51, 52, 82, 288, 658, 1707
ClaI	ATCGAT	1 cut(s)	2029
CseI	GACGC	1 cut(s)	1320
Csp6I	GTAC	4 cut(s)	245, 512, 1846, 2149
CspCI	CAANNNNNGTGG	2 cut(s)	579, 614
CviQI	GTAC	4 cut(s)	245, 512, 1846, 2149
Eam1104I	CTCTTC	4 cut(s)	855, 1018, 1428, 1680
EarI	CTCTTC	4 cut(s)	855, 1018, 1428, 1680
EciI	GGCGGA	1 cut(s)	636
Eco130I	CCWWGG	2 cut(s)	1684, 2059
Eco24I	GRGCYC	1 cut(s)	55
Eco31I	GGTCTC	1 cut(s)	1544
Eco47I	GGWCC	2 cut(s)	82, 288
Eco57I	CTGAAG	1 cut(s)	1322
Eco81I	CCTNAGG	1 cut(s)	1409
Eco88I	CYCGRG	1 cut(s)	1067
EcoNI	CCTNNNNNAGG	1 cut(s)	1805
EcoO109I	RGGNCCY	1 cut(s)	288
EcoRI	GAATTC	2 cut(s)	1141, 1823
EcoRII	CCWGG	5 cut(s)	277, 291, 936, 1129, 1471
EcoT14I	CCWWGG	2 cut(s)	1684, 2059
EcoT22I	ATGCAT	1 cut(s)	726
EcoT38I	GRGCYC	1 cut(s)	55
ErhI	CCWWGG	2 cut(s)	1684, 2059
FalI	AAGNNNNNCTT	2 cut(s)	1200, 1232
FaqI	GGGAC	6 cut(s)	274, 571, 664, 1089, 1665, 1879
FauI	CCCGC	1 cut(s)	466
FauNDI	CATATG	1 cut(s)	849
FbaI	TGATCA	1 cut(s)	1036
FblI	GTMKAC	1 cut(s)	1096
FokI	GGATG	5 cut(s)	172, 684, 1244, 1406, 2141
FriOI	GRGCYC	1 cut(s)	55
FspBI	CTAG	3 cut(s)	1194, 1449, 1484
GsaI	CCCAGC	1 cut(s)	1900
GsuI	CTGGAG	2 cut(s)	211, 528
HaeIII	GGCC	6 cut(s)	53, 659, 1215, 1434, 1709, 1928
HapII	CCGG	1 cut(s)	1945
HgaI	GACGC	1 cut(s)	1320
HincII	GTYRAC	1 cut(s)	499
HindII	GTYRAC	1 cut(s)	499
HindIII	AAGCTT	1 cut(s)	2006
HinfI	GANTC	5 cut(s)	164, 316, 1075, 2087, 2101
HpaII	CCGG	1 cut(s)	1945
HphI	GGTGA	4 cut(s)	294, 442, 1145, 1712
Hpy166II	GTNNAC	5 cut(s)	233, 410, 450, 499, 1097
Hpy188III	TCNNGA	6 cut(s)	113, 161, 1017, 1069, 1229, 1733
Hpy8I	GTNNAC	5 cut(s)	233, 410, 450, 499, 1097
HpyAV	CCTTC	5 cut(s)	711, 1235, 1293, 1313, 1825
HpyCH4III	ACNGT	9 cut(s)	594, 638, 1280, 1507, 1591, 1781, 1850, 1893, 2114
HpyCH4IV	ACGT	2 cut(s)	1102, 1969
HpySE526I	ACGT	2 cut(s)	1102, 1969
Ksp22I	TGATCA	1 cut(s)	1036
LguI	GCTCTTC	1 cut(s)	1428
LmnI	GCTCC	3 cut(s)	431, 1446, 1960
LweI	GCATC	4 cut(s)	319, 787, 1051, 2163
MaeI	CTAG	3 cut(s)	1194, 1449, 1484
MaeII	ACGT	2 cut(s)	1102, 1969
MaeIII	GTNAC	3 cut(s)	71, 480, 1332
MbiI	CCGCTC	1 cut(s)	152
MflI	RGATCY	3 cut(s)	828, 1348, 1615
MhlI	GDGCHC	5 cut(s)	55, 1627, 1801, 1998, 2128
MluCI	AATT	5 cut(s)	106, 237, 1141, 1823, 2169
MlyI	GAGTC	1 cut(s)	325
MmeI	TCCRAC	2 cut(s)	60, 555
Mph1103I	ATGCAT	1 cut(s)	726
MseI	TTAA	6 cut(s)	12, 539, 1520, 1605, 1754, 2052
MslI	CAYNNNNRTG	3 cut(s)	573, 906, 1989
MspA1I	CMGCKG	1 cut(s)	1559
MspI	CCGG	1 cut(s)	1945
MspR9I	CCNGG	6 cut(s)	279, 293, 938, 1131, 1473, 1946
Mva1269I	GAATGC	1 cut(s)	1042
MvaI	CCWGG	5 cut(s)	279, 293, 938, 1131, 1473
NciI	CCSGG	1 cut(s)	1946
NcoI	CCATGG	1 cut(s)	2059
NdeI	CATATG	1 cut(s)	849
NheI	GCTAGC	1 cut(s)	1483
NlaIV	GGNNCC	6 cut(s)	53, 290, 830, 1179, 1350, 1708
NmuCI	GTSAC	2 cut(s)	480, 1332
NsiI	ATGCAT	1 cut(s)	726
NspI	RCATGY	4 cut(s)	442, 893, 1154, 1602
PaeI	GCATGC	1 cut(s)	893
PasI	CCCWGGG	1 cut(s)	292
PciSI	GCTCTTC	1 cut(s)	1428
PctI	GAATGC	1 cut(s)	1042
PfeI	GAWTC	4 cut(s)	164, 1075, 2087, 2101
PflFI	GACNNNGTC	1 cut(s)	1101
PflMI	CCANNNNNTGG	1 cut(s)	725
PleI	GAGTC	1 cut(s)	324
PpsI	GAGTC	1 cut(s)	324
Ppu21I	YACGTR	1 cut(s)	1970
PpuMI	RGGWCCY	1 cut(s)	288
PshAI	GACNNNNGTC	1 cut(s)	583
PshBI	ATTAAT	1 cut(s)	1605
PsiI	TTATAA	1 cut(s)	2176
Psp5II	RGGWCCY	1 cut(s)	288
Psp6I	CCWGG	5 cut(s)	277, 291, 936, 1129, 1471
PspFI	CCCAGC	1 cut(s)	1896
PspGI	CCWGG	5 cut(s)	277, 291, 936, 1129, 1471
PspN4I	GGNNCC	6 cut(s)	53, 290, 830, 1179, 1350, 1708
PspOMI	GGGCCC	1 cut(s)	51
PspPI	GGNCC	6 cut(s)	51, 52, 82, 288, 658, 1707
PspPPI	RGGWCCY	1 cut(s)	288
PstI	CTGCAG	1 cut(s)	1558
PstNI	CAGNNNCTG	2 cut(s)	313, 1562
PsuI	RGATCY	3 cut(s)	828, 1348, 1615
PsyI	GACNNNGTC	1 cut(s)	1101
PvuII	CAGCTG	1 cut(s)	1559
RsaI	GTAC	4 cut(s)	246, 513, 1847, 2150
RsaNI	GTAC	4 cut(s)	245, 512, 1846, 2149
RseI	CAYNNNNRTG	3 cut(s)	573, 906, 1989
SapI	GCTCTTC	1 cut(s)	1428
SaqAI	TTAA	6 cut(s)	12, 539, 1520, 1605, 1754, 2052
Sau96I	GGNCC	6 cut(s)	51, 52, 82, 288, 658, 1707
ScaI	AGTACT	2 cut(s)	513, 1847
SchI	GAGTC	1 cut(s)	325
ScrFI	CCNGG	6 cut(s)	279, 293, 938, 1131, 1473, 1946
SduI	GDGCHC	5 cut(s)	55, 1627, 1801, 1998, 2128
SfaNI	GCATC	4 cut(s)	319, 787, 1051, 2163
SfcI	CTRYAG	3 cut(s)	215, 1554, 1780
SinI	GGWCC	2 cut(s)	82, 288
SmiMI	CAYNNNNRTG	3 cut(s)	573, 906, 1989
SmlI	CTYRAG	1 cut(s)	786
SmoI	CTYRAG	1 cut(s)	786
SphI	GCATGC	1 cut(s)	893
Sse9I	AATT	5 cut(s)	106, 237, 1141, 1823, 2169
SsiI	CCGC	7 cut(s)	150, 459, 647, 1263, 1303, 1646, 1710
SspI	AATATT	1 cut(s)	1884
SspMI	CTAG	3 cut(s)	1194, 1449, 1484
StyD4I	CCNGG	6 cut(s)	277, 291, 936, 1129, 1471, 1944
StyI	CCWWGG	2 cut(s)	1684, 2059
TaaI	ACNGT	9 cut(s)	594, 638, 1280, 1507, 1591, 1781, 1850, 1893, 2114
TaiI	ACGT	2 cut(s)	1105, 1972
TaqI	TCGA	7 cut(s)	763, 968, 1119, 1249, 1818, 2029, 2163
TasI	AATT	5 cut(s)	106, 237, 1141, 1823, 2169
TatI	WGTACW	2 cut(s)	511, 1845
TauI	GCSGC	2 cut(s)	1306, 1712
TfiI	GAWTC	4 cut(s)	164, 1075, 2087, 2101
Tru1I	TTAA	6 cut(s)	12, 539, 1520, 1605, 1754, 2052
Tru9I	TTAA	6 cut(s)	12, 539, 1520, 1605, 1754, 2052
TscAI	CASTG	4 cut(s)	235, 967, 2074, 2119
TseFI	GTSAC	2 cut(s)	480, 1332
Tsp45I	GTSAC	2 cut(s)	480, 1332
TspDTI	ATGAA	8 cut(s)	24, 348, 383, 456, 1647, 1836, 1878, 2093
TspGWI	ACGGA	3 cut(s)	132, 1082, 1502
TspRI	CASTG	4 cut(s)	235, 967, 2074, 2119
Tth111I	GACNNNGTC	1 cut(s)	1101
Van91I	CCANNNNNTGG	1 cut(s)	725
VpaK11BI	GGWCC	2 cut(s)	82, 288
VspI	ATTAAT	1 cut(s)	1605
XagI	CCTNNNNNAGG	1 cut(s)	1805
XapI	RAATTY	2 cut(s)	1141, 1823
XceI	RCATGY	4 cut(s)	442, 893, 1154, 1602
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2066
XmiI	GTMKAC	1 cut(s)	1096
XspI	CTAG	3 cut(s)	1194, 1449, 1484
ZrmI	AGTACT	2 cut(s)	513, 1847
Zsp2I	ATGCAT	1 cut(s)	726

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.