Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0014528

Physical Location & Seq

Genomic Coordinates Forward (+)

32170184 .. 32176363

Gene Structure 6180 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g40720.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1395 bp

ATGTCTTCTTCATCATCATCATCATCTTCGCCATCATCTTCATCACCTTCCACATCTCAGAATGATAGAGGCAATGTGGCTGGTACTAGCACCGTACGACAAAGAAGGGGTAGTGATTTTGAAGGGCCATCATCTTCGAGACGACGTGCCGTCAGTGAGGTCTGGCCGGAGCCTTTCATTGAAGCACTCGCCGCCCAGATTGCCATTGACGCTTCTCGCAACATTGGCCGCCTCGCCGTCGCTGCTGCACTCGCCAATATCTTCCAGGTGTGTTCGACGTGGCGCGCCGTTTCCCGCTCAGAACTTCTATGGCGCCGGCTTTCTCGCCGGATTTGGGGGCGGACTCAACTTACTCAGGACACGTGGCGTGACGAGTATGTGTACTGGCATCGGACGGCTAGAAACTTCCGGATGGGGAGGTACACGCACACGAGGCTTTACTTTGACCCGTCTGACGTGGACGACCCGGACGGGTTGACCTGCCGGTGCCTGGCTCTCTCCGACACCCACCTCGCGTGCGGCTTTGCCGACGGAGCGGTCAGGCTCTTCAACCTCACCACGCGCCTCCACGTCAGCACGTACCGGCCCCACCACCGTGACCGTATGGGGAGATTTTCCCGGGCGGTTACGGGGATCGTGATCAGTGATTCTCGGCTCGTTTTCGCCACGCTGGACGGGGACATCCACGTGGCGGCTTTGCATGGTCCGGCAATCACGAGGAGGGCCCACCTGGGGGATTGGATGAACGACGGCGTTTTGGTGGACTTCACCGGCTGCGGGCGGTGGTGGGTGGGTCTCTACGCCGGAGTTCCGGGTCGTGCTATTCATATCTGGGACGCGAGCACCGAAGAGCTTCTTTTCGTGGACGGGTCGTTGACCGACCCGGAAGCGGTGGCGGGTTGGCACATGCTGAGGGAGTTGACCGGGTTTGTGGGCCGGGTCCGGGTCACGACCCAGGAGACCGCGGTGGCGTGCACGAGCGCGCGTGTCATCGTGTTCGACCTGCGGAACCAAGGAGTGGTCCTGGCGGACGACGAGTACCGAAGAGGGGTCGTGGTGACATCGGTCGACGTCAGCAACGGCCGTTACGTCGTCGTCGGGAACAGGGGCATGGCCAGGGTGCGGCGGGCGGACACGGCGCAGGAGATGTGCAGGTTCATGGTGCTCGGAGCCGGGCAGATGGGGGTGATGGGTTGCATGAACGGCGGGTACGCGCTGATGTGCGGCGGCGGAGCGGTTAGGGTCTGGGAGGTGGAGAGGGGCGAGTATCTGTACAATTTCACGGAGCCGGTGGGGGCGGTCAGCGCTTTTGTGTGTGACGAACGACATGTCGCAGCATGGGGGAGTGATACGACACTGCACCTGTGGGACTTTGGTGCAGGTGCAGCGGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006807 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009553 GO:0009554 GO:0009791 GO:0009889 GO:0009908 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019538 GO:0019953 GO:0022402 GO:0022414 GO:0030163 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0034293 GO:0040008 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043934 GO:0044238 GO:0044424 GO:0044464 GO:0044703 GO:0045927 GO:0046620 GO:0046622 GO:0048229 GO:0048236 GO:0048367 GO:0048518 GO:0048608 GO:0048638 GO:0048639 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051094 GO:0051171 GO:0051239 GO:0051240 GO:0051252 GO:0051321 GO:0051704 GO:0060255 GO:0061458 GO:0065007 GO:0071704 GO:0080090 GO:0090567 GO:0140110 GO:1901564 GO:1901565 GO:1901575 GO:1903046 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

465

Amino Acids

51.17

Weight (kDa)

8.07

Isoelectric Point (pI)

43.88

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014528)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G35770
fragaria_vesca	FvH4_6g40720 FvH4_6g40720 FvH4_6g40720
malus_domestica	MD09G1126000.v1.1 MD17G1116000.v1.1
prunus_persica	Prupe.3G198700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0156171
rosa_laevigata	RLG00000020892
rosa_multiflora	Rmu_sc0000260.1_g000014
rosa_roxburghii	Rroxscaffold_2G00093180
rosa_rugosa	Rorug02G0452100
rosa_samantha	Rh2AG518700 Rh2BG530100 Rh2CG503700 Rh2DG539100
rosa_wichuraiana	Rw2G042720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1370
AasI	GACNNNNNNGTC	1 cut(s)	536
AatII	GACGTC	1 cut(s)	1074
Acc36I	ACCTGC	4 cut(s)	488, 1011, 1143, 1370
AccB1I	GGYRCC	2 cut(s)	312, 486
AccB7I	CCANNNNNTGG	1 cut(s)	1018
AccBSI	CCGCTC	3 cut(s)	297, 536, 1235
AccI	GTMKAC	1 cut(s)	1068
AccII	CGCG	8 cut(s)	285, 515, 562, 839, 965, 983, 985, 1214
AccIII	TCCGGA	1 cut(s)	408
AclWI	GGATC	1 cut(s)	641
AcoI	YGGCCR	4 cut(s)	164, 226, 1081, 1113
AcvI	CACGTG	2 cut(s)	363, 688
AcyI	GRCGYC	2 cut(s)	313, 1071
AfaI	GTAC	8 cut(s)	85, 96, 383, 422, 581, 1040, 1211, 1274
AfeI	AGCGCT	1 cut(s)	1306
AflIII	ACRYGT	2 cut(s)	360, 1327
AgsI	TTSAA	3 cut(s)	122, 182, 550
AhdI	GACNNNNNGTC	1 cut(s)	149
AjiI	CACGTC	4 cut(s)	146, 279, 457, 571
AjnI	CCWGG	6 cut(s)	264, 489, 729, 954, 1023, 1115
AleI	CACNNNNGTG	1 cut(s)	594
AluBI	AGCT	1 cut(s)	853
AluI	AGCT	1 cut(s)	853
Alw21I	GWGCWC	3 cut(s)	845, 977, 1167
Alw26I	GTCTC	3 cut(s)	133, 800, 953
Alw44I	GTGCAC	1 cut(s)	973
AlwI	GGATC	1 cut(s)	641
Ama87I	CYCGRG	1 cut(s)	618
Aor13HI	TCCGGA	1 cut(s)	408
Aor51HI	AGCGCT	1 cut(s)	1306
AoxI	GGCC	8 cut(s)	125, 164, 226, 584, 723, 934, 1081, 1113
ApaI	GGGCCC	1 cut(s)	727
ApaLI	GTGCAC	1 cut(s)	973
ApeKI	GCWGC	5 cut(s)	242, 245, 774, 1334, 1385
ArsI	GACNNNNNNTTYG	2 cut(s)	1314, 1346
AscI	GGCGCGCC	1 cut(s)	283
Asp700I	GAANNNNTTC	1 cut(s)	852
AspLEI	GCGC	9 cut(s)	285, 287, 315, 564, 983, 985, 1141, 1216, 1307
AspS9I	GGNCC	8 cut(s)	125, 585, 704, 723, 724, 934, 940, 1021
AsuC2I	CCSGG	9 cut(s)	467, 619, 620, 813, 884, 925, 938, 944, 1174
AsuHPI	GGTGA	5 cut(s)	36, 547, 760, 1069, 1198
AvaI	CYCGRG	1 cut(s)	618
AvaII	GGWCC	3 cut(s)	704, 940, 1021
BaeGI	GKGCMC	2 cut(s)	727, 977
BalI	TGGCCA	1 cut(s)	1115
BanI	GGYRCC	2 cut(s)	312, 486
BanII	GRGCYC	1 cut(s)	727
BauI	CACGAG	3 cut(s)	430, 715, 976
BbrPI	CACGTG	2 cut(s)	363, 688
Bbv12I	GWGCWC	3 cut(s)	845, 977, 1167
BbvCI	CCTCAGC	1 cut(s)	911
BbvI	GCAGC	4 cut(s)	229, 232, 761, 1346
BccI	CCATC	5 cut(s)	40, 136, 406, 1174, 1183
BceAI	ACGGC	9 cut(s)	134, 221, 272, 411, 766, 1068, 1096, 1152, 1219
BciT130I	CCWGG	6 cut(s)	266, 491, 731, 956, 1025, 1117
BclI	TGATCA	1 cut(s)	639
BcnI	CCSGG	9 cut(s)	467, 619, 620, 813, 884, 925, 938, 944, 1174
BcoDI	GTCTC	3 cut(s)	133, 800, 953
BfaI	CTAG	2 cut(s)	87, 399
BfoI	RGCGCY	2 cut(s)	316, 1308
BfuAI	ACCTGC	4 cut(s)	488, 1011, 1143, 1370
Bme18I	GGWCC	3 cut(s)	704, 940, 1021
BmeRI	GACNNNNNGTC	1 cut(s)	149
BmeT110I	CYCGRG	1 cut(s)	618
BmgBI	CACGTC	4 cut(s)	146, 279, 457, 571
BmgT120I	GGNCC	8 cut(s)	125, 585, 704, 723, 724, 934, 940, 1021
BmiI	GGNNCC	9 cut(s)	171, 314, 488, 587, 725, 941, 1010, 1171, 1287
BmsI	GCATC	1 cut(s)	397
BoxI	GACNNNNGTC	1 cut(s)	1064
Bpu10I	CCTNAGC	1 cut(s)	911
BpuMI	CCSGG	9 cut(s)	467, 619, 620, 813, 884, 925, 938, 944, 1174
BsaAI	YACGTR	3 cut(s)	363, 579, 688
BsaBI	GATNNNNATC	1 cut(s)	638
BsaHI	GRCGYC	2 cut(s)	313, 1071
BsaI	GGTCTC	2 cut(s)	800, 953
BsaJI	CCNNGG	6 cut(s)	618, 730, 954, 963, 1012, 1116
BsaWI	WCCGGW	1 cut(s)	408
Bse118I	RCCGGY	5 cut(s)	315, 483, 582, 770, 1288
Bse1I	ACTGG	1 cut(s)	389
Bse3DI	GCAATG	1 cut(s)	79
Bse8I	GATNNNNATC	1 cut(s)	638
BseAI	TCCGGA	1 cut(s)	408
BseBI	CCWGG	6 cut(s)	266, 491, 731, 956, 1025, 1117
BseDI	CCNNGG	6 cut(s)	618, 730, 954, 963, 1012, 1116
BseGI	GGATG	3 cut(s)	417, 681, 747
BseJI	GATNNNNATC	1 cut(s)	638
BseMI	GCAATG	1 cut(s)	79
BseMII	CTCAG	4 cut(s)	71, 312, 368, 902
BseNI	ACTGG	1 cut(s)	389
BsePI	GCGCGC	2 cut(s)	283, 981
BseRI	GAGGAG	1 cut(s)	733
BseSI	GKGCMC	2 cut(s)	727, 977
BseX3I	CGGCCG	1 cut(s)	1081
BseXI	GCAGC	4 cut(s)	229, 232, 761, 1346
BsgI	GTGCAG	3 cut(s)	231, 1171, 1343
Bsh1236I	CGCG	8 cut(s)	285, 515, 562, 839, 965, 983, 985, 1214
Bsh1285I	CGRYCG	2 cut(s)	1068, 1084
BshFI	GGCC	8 cut(s)	127, 166, 228, 586, 725, 936, 1083, 1115
BshNI	GGYRCC	2 cut(s)	312, 486
BsiEI	CGRYCG	2 cut(s)	1068, 1084
BsiHKAI	GWGCWC	3 cut(s)	845, 977, 1167
BsiHKCI	CYCGRG	1 cut(s)	618
BsiWI	CGTACG	1 cut(s)	94
BslFI	GGGAC	3 cut(s)	692, 848, 1382
BsmAI	GTCTC	3 cut(s)	133, 800, 953
BsmBI	CGTCTC	1 cut(s)	133
BsmFI	GGGAC	3 cut(s)	692, 848, 1382
BsnI	GGCC	8 cut(s)	127, 166, 228, 586, 725, 936, 1083, 1115
Bso31I	GGTCTC	2 cut(s)	800, 953
BsoBI	CYCGRG	1 cut(s)	618
Bsp120I	GGGCCC	1 cut(s)	723
Bsp1286I	GDGCHC	4 cut(s)	727, 845, 977, 1167
Bsp13I	TCCGGA	1 cut(s)	408
Bsp1407I	TGTACA	1 cut(s)	1272
Bsp143I	GATC	2 cut(s)	633, 639
BspANI	GGCC	8 cut(s)	127, 166, 228, 586, 725, 936, 1083, 1115
BspCNI	CTCAG	4 cut(s)	70, 311, 367, 903
BspEI	TCCGGA	1 cut(s)	408
BspFNI	CGCG	8 cut(s)	285, 515, 562, 839, 965, 983, 985, 1214
BspLI	GGNNCC	9 cut(s)	171, 314, 488, 587, 725, 941, 1010, 1171, 1287
BspMI	ACCTGC	4 cut(s)	488, 1011, 1143, 1370
BspPI	GGATC	1 cut(s)	641
BspQI	GCTCTTC	2 cut(s)	551, 843
BspT107I	GGYRCC	2 cut(s)	312, 486
BspTNI	GGTCTC	2 cut(s)	800, 953
BsrBI	CCGCTC	3 cut(s)	297, 536, 1235
BsrDI	GCAATG	1 cut(s)	79
BsrFI	RCCGGY	5 cut(s)	315, 483, 582, 770, 1288
BsrGI	TGTACA	1 cut(s)	1272
BsrI	ACTGG	1 cut(s)	389
BssAI	RCCGGY	5 cut(s)	315, 483, 582, 770, 1288
BssECI	CCNNGG	6 cut(s)	618, 730, 954, 963, 1012, 1116
BssHII	GCGCGC	2 cut(s)	283, 981
BssMI	GATC	2 cut(s)	633, 639
BssNI	GRCGYC	2 cut(s)	313, 1071
BssSI	CACGAG	3 cut(s)	430, 715, 976
BssT1I	CCWWGG	1 cut(s)	1012
Bst2BI	CACGAG	3 cut(s)	430, 715, 976
Bst2UI	CCWGG	6 cut(s)	266, 491, 731, 956, 1025, 1117
Bst4CI	ACNGT	3 cut(s)	94, 596, 602
Bst6I	CTCTTC	3 cut(s)	551, 843, 1039
BstACI	GRCGYC	2 cut(s)	313, 1071
BstAUI	TGTACA	1 cut(s)	1272
BstBAI	YACGTR	3 cut(s)	363, 579, 688
BstC8I	GCNNGC	8 cut(s)	285, 317, 517, 779, 841, 973, 983, 1128
BstDEI	CTNAG	4 cut(s)	57, 298, 354, 911
BstDSI	CCRYGG	1 cut(s)	963
BstF5I	GGATG	3 cut(s)	417, 681, 747
BstFNI	CGCG	8 cut(s)	285, 515, 562, 839, 965, 983, 985, 1214
BstH2I	RGCGCY	2 cut(s)	316, 1308
BstHHI	GCGC	9 cut(s)	285, 287, 315, 564, 983, 985, 1141, 1216, 1307
BstKTI	GATC	2 cut(s)	636, 642
BstMAI	GTCTC	3 cut(s)	133, 800, 953
BstMBI	GATC	2 cut(s)	633, 639
BstMCI	CGRYCG	2 cut(s)	1068, 1084
BstNI	CCWGG	6 cut(s)	266, 491, 731, 956, 1025, 1117
BstNSI	RCATGY	2 cut(s)	910, 1331
BstPAI	GACNNNNGTC	1 cut(s)	1064
BstSLI	GKGCMC	2 cut(s)	727, 977
BstUI	CGCG	8 cut(s)	285, 515, 562, 839, 965, 983, 985, 1214
BstV1I	GCAGC	4 cut(s)	229, 232, 761, 1346
BstZI	CGGCCG	1 cut(s)	1081
BsuRI	GGCC	8 cut(s)	127, 166, 228, 586, 725, 936, 1083, 1115
BtgI	CCRYGG	1 cut(s)	963
BtrI	CACGTC	4 cut(s)	146, 279, 457, 571
BtsCI	GGATG	3 cut(s)	417, 681, 747
BtsI	GCAGTG	1 cut(s)	1355
BtsIMutI	CAGTG	3 cut(s)	160, 649, 1355
BveI	ACCTGC	4 cut(s)	488, 1011, 1143, 1370
Cac8I	GCNNGC	8 cut(s)	285, 317, 517, 779, 841, 973, 983, 1128
CfoI	GCGC	9 cut(s)	285, 287, 315, 564, 983, 985, 1141, 1216, 1307
Cfr10I	RCCGGY	5 cut(s)	315, 483, 582, 770, 1288
Cfr13I	GGNCC	8 cut(s)	125, 585, 704, 723, 724, 934, 940, 1021
Cfr42I	CCGCGG	1 cut(s)	966
Cfr9I	CCCGGG	1 cut(s)	618
CseI	GACGC	2 cut(s)	218, 845
Csp6I	GTAC	8 cut(s)	84, 95, 382, 421, 580, 1039, 1210, 1273
CviAII	CATG	7 cut(s)	701, 907, 1111, 1159, 1198, 1328, 1338
CviQI	GTAC	8 cut(s)	84, 95, 382, 421, 580, 1039, 1210, 1273
DdeI	CTNAG	4 cut(s)	57, 298, 354, 911
DinI	GGCGCC	1 cut(s)	314
DpnI	GATC	2 cut(s)	635, 641
DpnII	GATC	2 cut(s)	633, 639
DrdI	GACNNNNNNGTC	1 cut(s)	536
DriI	GACNNNNNGTC	1 cut(s)	149
DseDI	GACNNNNNNGTC	1 cut(s)	536
EaeI	YGGCCR	4 cut(s)	164, 226, 1081, 1113
EagI	CGGCCG	1 cut(s)	1081
Eam1104I	CTCTTC	3 cut(s)	551, 843, 1039
Eam1105I	GACNNNNNGTC	1 cut(s)	149
EarI	CTCTTC	3 cut(s)	551, 843, 1039
EciI	GGCGGA	4 cut(s)	355, 1043, 1145, 1245
EclXI	CGGCCG	1 cut(s)	1081
Eco130I	CCWWGG	1 cut(s)	1012
Eco24I	GRGCYC	1 cut(s)	727
Eco31I	GGTCTC	2 cut(s)	800, 953
Eco47I	GGWCC	3 cut(s)	704, 940, 1021
Eco47III	AGCGCT	1 cut(s)	1306
Eco52I	CGGCCG	1 cut(s)	1081
Eco72I	CACGTG	2 cut(s)	363, 688
Eco88I	CYCGRG	1 cut(s)	618
EcoO109I	RGGNCCY	1 cut(s)	723
EcoRII	CCWGG	6 cut(s)	264, 489, 729, 954, 1023, 1115
EcoT14I	CCWWGG	1 cut(s)	1012
EcoT38I	GRGCYC	1 cut(s)	727
EgeI	GGCGCC	1 cut(s)	314
EheI	GGCGCC	1 cut(s)	314
ErhI	CCWWGG	1 cut(s)	1012
Esp3I	CGTCTC	1 cut(s)	133
FaeI	CATG	7 cut(s)	704, 910, 1114, 1162, 1201, 1331, 1341
FalI	AAGNNNNNCTT	2 cut(s)	840, 872
FaqI	GGGAC	3 cut(s)	692, 848, 1382
FatI	CATG	7 cut(s)	700, 906, 1110, 1158, 1197, 1327, 1337
FauI	CCCGC	5 cut(s)	302, 770, 889, 1119, 1199
FbaI	TGATCA	1 cut(s)	639
FblI	GTMKAC	1 cut(s)	1068
FokI	GGATG	3 cut(s)	424, 668, 754
FriOI	GRGCYC	1 cut(s)	727
FspBI	CTAG	2 cut(s)	87, 399
GlaI	GCGC	9 cut(s)	284, 286, 314, 563, 982, 984, 1140, 1215, 1306
HaeII	RGCGCY	2 cut(s)	316, 1308
HaeIII	GGCC	8 cut(s)	127, 166, 228, 586, 725, 936, 1083, 1115
HgaI	GACGC	2 cut(s)	218, 845
HhaI	GCGC	9 cut(s)	285, 287, 315, 564, 983, 985, 1141, 1216, 1307
Hin1I	GRCGYC	2 cut(s)	313, 1071
Hin1II	CATG	7 cut(s)	704, 910, 1114, 1162, 1201, 1331, 1341
Hin6I	GCGC	9 cut(s)	283, 285, 313, 562, 981, 983, 1139, 1214, 1305
HinP1I	GCGC	9 cut(s)	283, 285, 313, 562, 981, 983, 1139, 1214, 1305
HincII	GTYRAC	4 cut(s)	477, 876, 921, 1069
HindII	GTYRAC	4 cut(s)	477, 876, 921, 1069
HinfI	GANTC	2 cut(s)	343, 647
HphI	GGTGA	5 cut(s)	36, 547, 760, 1069, 1198
Hpy188I	TCNGA	6 cut(s)	60, 301, 393, 454, 502, 1169
Hpy188III	TCNNGA	7 cut(s)	138, 356, 409, 637, 715, 949, 1099
HpyAV	CCTTC	3 cut(s)	57, 99, 116
HpyCH4III	ACNGT	3 cut(s)	94, 596, 602
HpyCH4IV	ACGT	9 cut(s)	145, 278, 362, 456, 570, 578, 687, 1071, 1089
HpyCH4V	TGCA	8 cut(s)	248, 700, 975, 1152, 1197, 1360, 1379, 1385
HpyF3I	CTNAG	4 cut(s)	57, 298, 354, 911
HpySE526I	ACGT	9 cut(s)	145, 278, 362, 456, 570, 578, 687, 1071, 1089
Hsp92I	GRCGYC	2 cut(s)	313, 1071
Hsp92II	CATG	7 cut(s)	704, 910, 1114, 1162, 1201, 1331, 1341
HspAI	GCGC	9 cut(s)	283, 285, 313, 562, 981, 983, 1139, 1214, 1305
KasI	GGCGCC	1 cut(s)	312
Kpn2I	TCCGGA	1 cut(s)	408
KroI	GCCGGC	1 cut(s)	315
KroNI	GCCGGC	1 cut(s)	317
Ksp22I	TGATCA	1 cut(s)	639
KspI	CCGCGG	1 cut(s)	966
Kzo9I	GATC	2 cut(s)	633, 639
LguI	GCTCTTC	2 cut(s)	551, 843
LmnI	GCTCC	5 cut(s)	169, 533, 1169, 1232, 1285
Lsp1109I	GCAGC	4 cut(s)	229, 232, 761, 1346
LweI	GCATC	1 cut(s)	397
MaeI	CTAG	2 cut(s)	87, 399
MaeII	ACGT	9 cut(s)	145, 278, 362, 456, 570, 578, 687, 1071, 1089
MaeIII	GTNAC	7 cut(s)	368, 596, 625, 946, 1057, 1085, 1316
MalI	GATC	2 cut(s)	635, 641
MbiI	CCGCTC	3 cut(s)	297, 536, 1235
MboI	GATC	2 cut(s)	633, 639
MboII	GAAGA	7 cut(s)	18, 30, 126, 253, 538, 860, 1056
MhlI	GDGCHC	4 cut(s)	727, 845, 977, 1167
MlsI	TGGCCA	1 cut(s)	1115
MluCI	AATT	1 cut(s)	1276
MluNI	TGGCCA	1 cut(s)	1115
Mly113I	GGCGCC	1 cut(s)	313
MlyI	GAGTC	1 cut(s)	337
MmeI	TCCRAC	1 cut(s)	525
Mox20I	TGGCCA	1 cut(s)	1115
MroI	TCCGGA	1 cut(s)	408
MroNI	GCCGGC	1 cut(s)	315
MroXI	GAANNNNTTC	1 cut(s)	852
MscI	TGGCCA	1 cut(s)	1115
MslI	CAYNNNNRTG	2 cut(s)	594, 686
Msp20I	TGGCCA	1 cut(s)	1115
MspA1I	CMGCKG	2 cut(s)	965, 1388
MvaI	CCWGG	6 cut(s)	266, 491, 731, 956, 1025, 1117
MvnI	CGCG	8 cut(s)	285, 515, 562, 839, 965, 983, 985, 1214
NaeI	GCCGGC	1 cut(s)	317
NarI	GGCGCC	1 cut(s)	313
NciI	CCSGG	9 cut(s)	467, 619, 620, 813, 884, 925, 938, 944, 1174
NdeII	GATC	2 cut(s)	633, 639
NgoMIV	GCCGGC	1 cut(s)	315
NlaIII	CATG	7 cut(s)	704, 910, 1114, 1162, 1201, 1331, 1341
NlaIV	GGNNCC	9 cut(s)	171, 314, 488, 587, 725, 941, 1010, 1171, 1287
NmeAIII	GCCGAG	1 cut(s)	631
NmuCI	GTSAC	5 cut(s)	368, 596, 946, 1057, 1316
NspI	RCATGY	2 cut(s)	910, 1331
OliI	CACNNNNGTG	1 cut(s)	594
PalAI	GGCGCGCC	1 cut(s)	283
PaqCI	CACCTGC	1 cut(s)	1370
PauI	GCGCGC	2 cut(s)	283, 981
PciI	ACATGT	1 cut(s)	1327
PciSI	GCTCTTC	2 cut(s)	551, 843
PcsI	WCGNNNNNNNCGW	2 cut(s)	843, 1086
PdiI	GCCGGC	1 cut(s)	317
PdmI	GAANNNNTTC	1 cut(s)	852
PfeI	GAWTC	1 cut(s)	647
Pfl23II	CGTACG	1 cut(s)	94
PflMI	CCANNNNNTGG	1 cut(s)	1018
PleI	GAGTC	1 cut(s)	337
PluTI	GGCGCC	1 cut(s)	316
PmaCI	CACGTG	2 cut(s)	363, 688
PmlI	CACGTG	2 cut(s)	363, 688
PpsI	GAGTC	1 cut(s)	337
Ppu21I	YACGTR	3 cut(s)	363, 579, 688
PscI	ACATGT	1 cut(s)	1327
PshAI	GACNNNNGTC	1 cut(s)	1064
Psp6I	CCWGG	6 cut(s)	264, 489, 729, 954, 1023, 1115
PspCI	CACGTG	2 cut(s)	363, 688
PspGI	CCWGG	6 cut(s)	264, 489, 729, 954, 1023, 1115
PspLI	CGTACG	1 cut(s)	94
PspN4I	GGNNCC	9 cut(s)	171, 314, 488, 587, 725, 941, 1010, 1171, 1287
PspOMI	GGGCCC	1 cut(s)	723
PspPI	GGNCC	8 cut(s)	125, 585, 704, 723, 724, 934, 940, 1021
PsrI	GAACNNNNNNTAC	2 cut(s)	1193, 1225
PteI	GCGCGC	2 cut(s)	283, 981
RsaI	GTAC	8 cut(s)	85, 96, 383, 422, 581, 1040, 1211, 1274
RsaNI	GTAC	8 cut(s)	84, 95, 382, 421, 580, 1039, 1210, 1273
RseI	CAYNNNNRTG	2 cut(s)	594, 686
SacII	CCGCGG	1 cut(s)	966
SalI	GTCGAC	1 cut(s)	1067
SapI	GCTCTTC	2 cut(s)	551, 843
Sau3AI	GATC	2 cut(s)	633, 639
Sau96I	GGNCC	8 cut(s)	125, 585, 704, 723, 724, 934, 940, 1021
SchI	GAGTC	1 cut(s)	337
SduI	GDGCHC	4 cut(s)	727, 845, 977, 1167
SfaNI	GCATC	1 cut(s)	397
SfoI	GGCGCC	1 cut(s)	314
Sfr303I	CCGCGG	1 cut(s)	966
SgrBI	CCGCGG	1 cut(s)	966
SgsI	GGCGCGCC	1 cut(s)	283
SinI	GGWCC	3 cut(s)	704, 940, 1021
SmaI	CCCGGG	1 cut(s)	620
SmiMI	CAYNNNNRTG	2 cut(s)	594, 686
Sse9I	AATT	1 cut(s)	1276
SspDI	GGCGCC	1 cut(s)	312
SspMI	CTAG	2 cut(s)	87, 399
StyI	CCWWGG	1 cut(s)	1012
TaaI	ACNGT	3 cut(s)	94, 596, 602
TaiI	ACGT	9 cut(s)	148, 281, 365, 459, 573, 581, 690, 1074, 1092
TaqI	TCGA	4 cut(s)	137, 275, 999, 1068
TaqII	GACCGA	2 cut(s)	893, 1054
TasI	AATT	1 cut(s)	1276
TatI	WGTACW	2 cut(s)	381, 1272
TauI	GCSGC	7 cut(s)	194, 231, 522, 695, 1126, 1227, 1230
TfiI	GAWTC	1 cut(s)	647
TscAI	CASTG	3 cut(s)	160, 649, 1362
TseFI	GTSAC	5 cut(s)	368, 596, 946, 1057, 1316
TseI	GCWGC	5 cut(s)	242, 245, 774, 1334, 1385
Tsp45I	GTSAC	5 cut(s)	368, 596, 946, 1057, 1316
TspDTI	ATGAA	6 cut(s)	30, 166, 758, 815, 1147, 1214
TspGWI	ACGGA	2 cut(s)	546, 1298
TspMI	CCCGGG	1 cut(s)	618
TspRI	CASTG	3 cut(s)	160, 649, 1362
Van91I	CCANNNNNTGG	1 cut(s)	1018
VneI	GTGCAC	1 cut(s)	973
VpaK11BI	GGWCC	3 cut(s)	704, 940, 1021
XceI	RCATGY	2 cut(s)	910, 1331
XmaI	CCCGGG	1 cut(s)	618
XmiI	GTMKAC	1 cut(s)	1068
XmnI	GAANNNNTTC	1 cut(s)	852
XspI	CTAG	2 cut(s)	87, 399
ZraI	GACGTC	1 cut(s)	1072

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.