Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0014528

Physical Location & Seq

Genomic Coordinates Forward (+)

73915315 .. 73916502

Gene Structure 1188 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG530100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1188 bp

ATGGTTTCCGGTTTTGCATGCATGAGTTTTAATGATTATTTACACGTGACTTTTTCTGAATGGCAGGTCTGCTCCACGTGGCGCGCCGTTTCCCGCTCGGACCTGCTCTGGCGCCGGCTCACTCGCCGGATTTGGGGCCGGACTCGCCTCCTCCAGGACACGTGGCGCGACGAGTACGTCTACTGGCATCGTACGGCTAGAAACTTCCGGACAAGGAGGTATGCGCACACGATACTCTACTTTGACCCGTCTGACGTGGACGATGCGGATGGACTGACTTGCCGGTGCCTGACTCTCTCCGACAACTACCTCGCCTGCGGCTTCGCGGACGGCGCAGTCCGACTCTTCGACCTCGCCACGCGCCTCCACGTCAGCACGTACCGGCCCCACCAGCGCGACAGGTTGGGCCGATTTTCCCGGGCCGTTACGGGGATCGTCATCAGCAATTCTCGGCTCACTTTCGCCACCCTGGACGGGGACATCCACGTGGCGGAGGTGCCCGGCCCGCCAATCACGCGGAGGGCCCACTTAGGCCAAGTGATGGACGACGGCGTGTTGGTGGACTTCACCGGCTGCGGGAGGTGGTGGGTGGGCCTGTACGCCGGCGTTCCGGGTCGGGCCATCCACATCTGGGACAGTAACACCGAAGAGCTCGTCTTCGTGGGCGGGGAGTTGACCGAGCCGGAAGCGGTGGTGGGCTGGCACATGCTGACCGAGATGAGCGGGTTCGTGGGCCGGGTCCGGGTCACGACCCAAGAAACCGCCGTGGCGTGCACGAGCGCGCGAGTCATCGTCTTCGATTTGCGGAACGGAGGAGAGGTGCTGGCGGAGGAGCAGTACAGAAGAGGAATCGTCGTGACGGCGACCGACGTCAGCGACGCGGCTTACGTTGTCGTCGGAAACAGGGGACTGGCTAGGGTGCGGCGGGCGGACACGTCGGAGGAGCTGTGCAGGTTCTCGGTGAGAGGCGCCGGGCAGATGGGGGCGATGGGTTGCATGAACGGCGGGTACGCGCTGATGTGCGCCGGCGGGGTGATTAGGGTTTGGGAGGTGGAGCGGGGCGAGGAGCTGTACACTTTCTGGGAGCACGTGGGGGCGGTCAACGCTTTTGTCTGCGACGGACGACATGTCGCGGCGTGGGGTAGTGATGCGACACTGCACCTGTGGGACTTTGGTGGTCAGGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006807 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009553 GO:0009554 GO:0009791 GO:0009889 GO:0009908 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019538 GO:0019953 GO:0022402 GO:0022414 GO:0030163 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0034293 GO:0040008 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043934 GO:0044238 GO:0044424 GO:0044464 GO:0044703 GO:0045927 GO:0046620 GO:0046622 GO:0048229 GO:0048236 GO:0048367 GO:0048518 GO:0048608 GO:0048638 GO:0048639 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051094 GO:0051171 GO:0051239 GO:0051240 GO:0051252 GO:0051321 GO:0051704 GO:0060255 GO:0061458 GO:0065007 GO:0071704 GO:0080090 GO:0090567 GO:0140110 GO:1901564 GO:1901565 GO:1901575 GO:1903046 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

395

Amino Acids

44.34

Weight (kDa)

6.19

Isoelectric Point (pI)

40.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_TEP1_2nd	PF25047	342 - 395	4.3e-06	TEP-1 second beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014528)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G35770
fragaria_vesca	FvH4_6g40720 FvH4_6g40720 FvH4_6g40720
malus_domestica	MD09G1126000.v1.1 MD17G1116000.v1.1
prunus_persica	Prupe.3G198700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0156171
rosa_laevigata	RLG00000020892
rosa_multiflora	Rmu_sc0000260.1_g000014
rosa_roxburghii	Rroxscaffold_2G00093180
rosa_rugosa	Rorug02G0452100
rosa_samantha	Rh2AG518700 Rh2BG530100 Rh2CG503700 Rh2DG539100
rosa_wichuraiana	Rw2G042720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	176, 335
AatII	GACGTC	1 cut(s)	873
Acc16I	TGCGCA	1 cut(s)	225
Acc36I	ACCTGC	3 cut(s)	55, 111, 942
AccB1I	GGYRCC	4 cut(s)	111, 285, 496, 968
AccB7I	CCANNNNNTGG	1 cut(s)	541
AccBSI	CCGCTC	3 cut(s)	96, 723, 1057
AccI	GTMKAC	1 cut(s)	180
AccIII	TCCGGA	1 cut(s)	207
AclWI	GGATC	1 cut(s)	440
AcvI	CACGTG	5 cut(s)	46, 78, 162, 487, 1090
AcyI	GRCGYC	3 cut(s)	112, 870, 969
AfaI	GTAC	7 cut(s)	176, 193, 380, 599, 839, 1010, 1073
AflIII	ACRYGT	4 cut(s)	43, 159, 933, 1126
AhdI	GACNNNNNGTC	1 cut(s)	1127
AjiI	CACGTC	3 cut(s)	256, 370, 936
AjnI	CCWGG	2 cut(s)	153, 468
AluBI	AGCT	3 cut(s)	652, 946, 1069
AluI	AGCT	3 cut(s)	652, 946, 1069
Alw21I	GWGCWC	3 cut(s)	654, 776, 1089
Alw44I	GTGCAC	1 cut(s)	772
AlwI	GGATC	1 cut(s)	440
Ama87I	CYCGRG	1 cut(s)	417
Aor13HI	TCCGGA	1 cut(s)	207
ApaI	GGGCCC	1 cut(s)	526
ApaLI	GTGCAC	1 cut(s)	772
ApeKI	GCWGC	1 cut(s)	573
ArsI	GACNNNNNNTTYG	2 cut(s)	639, 671
AscI	GGCGCGCC	1 cut(s)	82
AsuC2I	CCSGG	7 cut(s)	418, 419, 501, 612, 737, 743, 973
AsuHPI	GGTGA	3 cut(s)	559, 973, 1045
AvaI	CYCGRG	1 cut(s)	417
AvaII	GGWCC	2 cut(s)	100, 739
BaeGI	GKGCMC	3 cut(s)	501, 526, 776
BanI	GGYRCC	4 cut(s)	111, 285, 496, 968
BanII	GRGCYC	2 cut(s)	526, 654
BauI	CACGAG	1 cut(s)	775
BbrPI	CACGTG	5 cut(s)	46, 78, 162, 487, 1090
BbsI	GAAGAC	2 cut(s)	649, 787
Bbv12I	GWGCWC	3 cut(s)	654, 776, 1089
BbvI	GCAGC	1 cut(s)	560
BccI	CCATC	5 cut(s)	263, 535, 629, 973, 982
BceAI	ACGGC	8 cut(s)	71, 210, 346, 407, 565, 749, 876, 1018
BciT130I	CCWGG	2 cut(s)	155, 470
BcnI	CCSGG	7 cut(s)	418, 419, 501, 612, 737, 743, 973
BfaI	CTAG	2 cut(s)	198, 915
BfoI	RGCGCY	2 cut(s)	115, 972
BfuAI	ACCTGC	3 cut(s)	55, 111, 942
BisI	GCNGC	5 cut(s)	319, 574, 882, 923, 1134
BlsI	GCNGC	5 cut(s)	320, 575, 883, 924, 1135
Bme1390I	CCNGG	9 cut(s)	155, 418, 419, 470, 501, 612, 737, 743, 973
Bme18I	GGWCC	2 cut(s)	100, 739
BmeRI	GACNNNNNGTC	1 cut(s)	1127
BmeT110I	CYCGRG	1 cut(s)	417
BmgBI	CACGTC	3 cut(s)	256, 370, 936
BmiI	GGNNCC	8 cut(s)	113, 137, 287, 386, 498, 524, 740, 970
BmrFI	CCNGG	9 cut(s)	155, 418, 419, 470, 501, 612, 737, 743, 973
BmsI	GCATC	3 cut(s)	196, 253, 1138
BoxI	GACNNNNGTC	1 cut(s)	869
BpiI	GAAGAC	2 cut(s)	649, 787
BpmI	CTGGAG	1 cut(s)	137
BpuMI	CCSGG	7 cut(s)	418, 419, 501, 612, 737, 743, 973
BsaAI	YACGTR	6 cut(s)	46, 78, 162, 378, 487, 1090
BsaBI	GATNNNNATC	1 cut(s)	437
BsaHI	GRCGYC	3 cut(s)	112, 870, 969
BsaJI	CCNNGG	3 cut(s)	417, 468, 765
BsaWI	WCCGGW	2 cut(s)	8, 207
BsaXI	ACNNNNNCTCC	6 cut(s)	804, 821, 834, 851, 932, 962
Bse118I	RCCGGY	6 cut(s)	114, 282, 381, 569, 602, 1025
Bse1I	ACTGG	2 cut(s)	188, 915
Bse8I	GATNNNNATC	1 cut(s)	437
BseAI	TCCGGA	1 cut(s)	207
BseBI	CCWGG	2 cut(s)	155, 470
BseDI	CCNNGG	3 cut(s)	417, 468, 765
BseGI	GGATG	3 cut(s)	274, 480, 621
BseJI	GATNNNNATC	1 cut(s)	437
BseNI	ACTGG	2 cut(s)	188, 915
BsePI	GCGCGC	2 cut(s)	82, 780
BseRI	GAGGAG	5 cut(s)	140, 828, 845, 956, 1079
BseSI	GKGCMC	3 cut(s)	501, 526, 776
BseXI	GCAGC	1 cut(s)	560
BsgI	GTGCAG	2 cut(s)	970, 1142
Bsh1285I	CGRYCG	1 cut(s)	867
BshNI	GGYRCC	4 cut(s)	111, 285, 496, 968
BsiEI	CGRYCG	1 cut(s)	867
BsiHKAI	GWGCWC	3 cut(s)	654, 776, 1089
BsiHKCI	CYCGRG	1 cut(s)	417
BsiWI	CGTACG	1 cut(s)	191
BslFI	GGGAC	4 cut(s)	491, 647, 921, 1181
BsmFI	GGGAC	4 cut(s)	491, 647, 921, 1181
BsoBI	CYCGRG	1 cut(s)	417
Bsp120I	GGGCCC	1 cut(s)	522
Bsp1286I	GDGCHC	5 cut(s)	501, 526, 654, 776, 1089
Bsp13I	TCCGGA	1 cut(s)	207
Bsp1407I	TGTACA	1 cut(s)	1071
Bsp143I	GATC	1 cut(s)	432
BspEI	TCCGGA	1 cut(s)	207
BspLI	GGNNCC	8 cut(s)	113, 137, 287, 386, 498, 524, 740, 970
BspMI	ACCTGC	3 cut(s)	55, 111, 942
BspPI	GGATC	1 cut(s)	440
BspQI	GCTCTTC	1 cut(s)	642
BspT107I	GGYRCC	4 cut(s)	111, 285, 496, 968
BsrBI	CCGCTC	3 cut(s)	96, 723, 1057
BsrFI	RCCGGY	6 cut(s)	114, 282, 381, 569, 602, 1025
BsrGI	TGTACA	1 cut(s)	1071
BsrI	ACTGG	2 cut(s)	188, 915
BssAI	RCCGGY	6 cut(s)	114, 282, 381, 569, 602, 1025
BssECI	CCNNGG	3 cut(s)	417, 468, 765
BssHII	GCGCGC	2 cut(s)	82, 780
BssMI	GATC	1 cut(s)	432
BssNI	GRCGYC	3 cut(s)	112, 870, 969
BssSI	CACGAG	1 cut(s)	775
Bst2BI	CACGAG	1 cut(s)	775
Bst2UI	CCWGG	2 cut(s)	155, 470
Bst4CI	ACNGT	1 cut(s)	638
Bst6I	CTCTTC	3 cut(s)	350, 642, 838
BstACI	GRCGYC	3 cut(s)	112, 870, 969
BstAUI	TGTACA	1 cut(s)	1071
BstBAI	YACGTR	6 cut(s)	46, 78, 162, 378, 487, 1090
BstDEI	CTNAG	1 cut(s)	529
BstDSI	CCRYGG	1 cut(s)	765
BstENI	CCTNNNNNAGG	1 cut(s)	152
BstF5I	GGATG	3 cut(s)	274, 480, 621
BstH2I	RGCGCY	2 cut(s)	115, 972
BstKTI	GATC	1 cut(s)	435
BstMBI	GATC	1 cut(s)	432
BstMCI	CGRYCG	1 cut(s)	867
BstMWI	GCNNNNNNNGC	7 cut(s)	144, 332, 391, 505, 514, 1002, 1103
BstNI	CCWGG	2 cut(s)	155, 470
BstNSI	RCATGY	3 cut(s)	21, 709, 1130
BstPAI	GACNNNNGTC	1 cut(s)	869
BstSCI	CCNGG	9 cut(s)	153, 416, 417, 468, 499, 610, 735, 741, 971
BstSLI	GKGCMC	3 cut(s)	501, 526, 776
BstV1I	GCAGC	1 cut(s)	560
BstV2I	GAAGAC	2 cut(s)	649, 787
BtgI	CCRYGG	1 cut(s)	765
BtgZI	GCGATG	1 cut(s)	1001
BtrI	CACGTC	3 cut(s)	256, 370, 936
BtsCI	GGATG	3 cut(s)	274, 480, 621
BtsI	GCAGTG	1 cut(s)	1154
BtsIMutI	CAGTG	1 cut(s)	1154
BveI	ACCTGC	3 cut(s)	55, 111, 942
Cfr10I	RCCGGY	6 cut(s)	114, 282, 381, 569, 602, 1025
Cfr9I	CCCGGG	1 cut(s)	417
CseI	GACGC	1 cut(s)	887
Csp6I	GTAC	7 cut(s)	175, 192, 379, 598, 838, 1009, 1072
CviAII	CATG	5 cut(s)	18, 22, 706, 997, 1127
CviQI	GTAC	7 cut(s)	175, 192, 379, 598, 838, 1009, 1072
DdeI	CTNAG	1 cut(s)	529
DinI	GGCGCC	2 cut(s)	113, 970
DpnI	GATC	1 cut(s)	434
DpnII	GATC	1 cut(s)	432
DrdI	GACNNNNNNGTC	2 cut(s)	176, 335
DriI	GACNNNNNGTC	1 cut(s)	1127
DseDI	GACNNNNNNGTC	2 cut(s)	176, 335
Eam1104I	CTCTTC	3 cut(s)	350, 642, 838
Eam1105I	GACNNNNNGTC	1 cut(s)	1127
EarI	CTCTTC	3 cut(s)	350, 642, 838
EciI	GGCGGA	3 cut(s)	506, 842, 944
Ecl136II	GAGCTC	1 cut(s)	652
Eco24I	GRGCYC	2 cut(s)	526, 654
Eco47I	GGWCC	2 cut(s)	100, 739
Eco53kI	GAGCTC	1 cut(s)	652
Eco72I	CACGTG	5 cut(s)	46, 78, 162, 487, 1090
Eco88I	CYCGRG	1 cut(s)	417
EcoICRI	GAGCTC	1 cut(s)	652
EcoNI	CCTNNNNNAGG	1 cut(s)	152
EcoO109I	RGGNCCY	1 cut(s)	522
EcoRII	CCWGG	2 cut(s)	153, 468
EcoT22I	ATGCAT	1 cut(s)	23
EcoT38I	GRGCYC	2 cut(s)	526, 654
EgeI	GGCGCC	2 cut(s)	113, 970
EheI	GGCGCC	2 cut(s)	113, 970
FaeI	CATG	5 cut(s)	21, 25, 709, 1000, 1130
FaiI	YATR	6 cut(s)	19, 23, 222, 707, 998, 1128
FaqI	GGGAC	4 cut(s)	491, 647, 921, 1181
FatI	CATG	5 cut(s)	17, 21, 705, 996, 1126
FauI	CCCGC	9 cut(s)	101, 513, 569, 659, 716, 918, 998, 1022, 1050
FblI	GTMKAC	1 cut(s)	180
Fnu4HI	GCNGC	5 cut(s)	319, 574, 882, 923, 1134
FokI	GGATG	3 cut(s)	281, 467, 608
FriOI	GRGCYC	2 cut(s)	526, 654
Fsp4HI	GCNGC	5 cut(s)	319, 574, 882, 923, 1134
FspAI	RTGCGCAY	1 cut(s)	225
FspBI	CTAG	2 cut(s)	198, 915
FspI	TGCGCA	1 cut(s)	225
GluI	GCNGC	5 cut(s)	319, 574, 882, 923, 1134
GsuI	CTGGAG	1 cut(s)	137
HaeII	RGCGCY	2 cut(s)	115, 972
HgaI	GACGC	1 cut(s)	887
Hin1I	GRCGYC	3 cut(s)	112, 870, 969
Hin1II	CATG	5 cut(s)	21, 25, 709, 1000, 1130
HincII	GTYRAC	2 cut(s)	675, 1102
HindII	GTYRAC	2 cut(s)	675, 1102
HinfI	GANTC	5 cut(s)	142, 292, 342, 786, 849
HphI	GGTGA	3 cut(s)	559, 973, 1045
Hpy166II	GTNNAC	7 cut(s)	181, 259, 562, 675, 774, 1074, 1102
Hpy188I	TCNGA	7 cut(s)	58, 100, 253, 301, 341, 899, 940
Hpy188III	TCNNGA	4 cut(s)	208, 748, 856, 1181
Hpy8I	GTNNAC	7 cut(s)	181, 259, 562, 675, 774, 1074, 1102
Hpy99I	CGWCG	8 cut(s)	173, 551, 857, 872, 881, 899, 940, 1121
HpyCH4III	ACNGT	1 cut(s)	638
HpyCH4V	TGCA	6 cut(s)	17, 21, 774, 951, 996, 1159
HpyF10VI	GCNNNNNNNGC	7 cut(s)	144, 332, 391, 505, 514, 1002, 1103
HpyF3I	CTNAG	1 cut(s)	529
Hsp92I	GRCGYC	3 cut(s)	112, 870, 969
Hsp92II	CATG	5 cut(s)	21, 25, 709, 1000, 1130
KasI	GGCGCC	2 cut(s)	111, 968
Kpn2I	TCCGGA	1 cut(s)	207
KroI	GCCGGC	3 cut(s)	114, 602, 1025
KroNI	GCCGGC	3 cut(s)	116, 604, 1027
Kzo9I	GATC	1 cut(s)	432
LguI	GCTCTTC	1 cut(s)	642
LmnI	GCTCC	6 cut(s)	77, 832, 943, 1054, 1066, 1084
Lsp1109I	GCAGC	1 cut(s)	560
LweI	GCATC	3 cut(s)	196, 253, 1138
MaeI	CTAG	2 cut(s)	198, 915
MaeIII	GTNAC	5 cut(s)	46, 424, 638, 745, 856
MalI	GATC	1 cut(s)	434
MbiI	CCGCTC	3 cut(s)	96, 723, 1057
MboI	GATC	1 cut(s)	432
MboII	GAAGA	5 cut(s)	337, 649, 659, 787, 855
MhlI	GDGCHC	5 cut(s)	501, 526, 654, 776, 1089
MluCI	AATT	1 cut(s)	445
Mly113I	GGCGCC	2 cut(s)	112, 969
MlyI	GAGTC	4 cut(s)	136, 286, 336, 795
MmeI	TCCRAC	4 cut(s)	324, 364, 877, 918
Mph1103I	ATGCAT	1 cut(s)	23
MreI	CGCCGGCG	2 cut(s)	602, 1025
MroI	TCCGGA	1 cut(s)	207
MroNI	GCCGGC	3 cut(s)	114, 602, 1025
MseI	TTAA	1 cut(s)	30
MslI	CAYNNNNRTG	1 cut(s)	485
MspR9I	CCNGG	9 cut(s)	155, 418, 419, 470, 501, 612, 737, 743, 973
MvaI	CCWGG	2 cut(s)	155, 470
MwoI	GCNNNNNNNGC	7 cut(s)	144, 332, 391, 505, 514, 1002, 1103
NaeI	GCCGGC	3 cut(s)	116, 604, 1027
NarI	GGCGCC	2 cut(s)	112, 969
NciI	CCSGG	7 cut(s)	418, 419, 501, 612, 737, 743, 973
NdeII	GATC	1 cut(s)	432
NgoMIV	GCCGGC	3 cut(s)	114, 602, 1025
NlaIII	CATG	5 cut(s)	21, 25, 709, 1000, 1130
NlaIV	GGNNCC	8 cut(s)	113, 137, 287, 386, 498, 524, 740, 970
NmeAIII	GCCGAG	1 cut(s)	430
NmuCI	GTSAC	3 cut(s)	46, 745, 856
NsbI	TGCGCA	1 cut(s)	225
NsiI	ATGCAT	1 cut(s)	23
NspI	RCATGY	3 cut(s)	21, 709, 1130
PaeI	GCATGC	1 cut(s)	21
PalAI	GGCGCGCC	1 cut(s)	82
PauI	GCGCGC	2 cut(s)	82, 780
PciI	ACATGT	1 cut(s)	1126
PciSI	GCTCTTC	1 cut(s)	642
PcsI	WCGNNNNNNNCGW	1 cut(s)	885
PdiI	GCCGGC	3 cut(s)	116, 604, 1027
PfeI	GAWTC	1 cut(s)	849
Pfl23II	CGTACG	1 cut(s)	191
PflMI	CCANNNNNTGG	1 cut(s)	541
PfoI	TCCNGGA	1 cut(s)	153
PkrI	GCNGC	5 cut(s)	320, 575, 883, 924, 1135
PleI	GAGTC	4 cut(s)	136, 286, 336, 794
PluTI	GGCGCC	2 cut(s)	115, 972
PmaCI	CACGTG	5 cut(s)	46, 78, 162, 487, 1090
PmlI	CACGTG	5 cut(s)	46, 78, 162, 487, 1090
PpsI	GAGTC	4 cut(s)	136, 286, 336, 794
Ppu21I	YACGTR	6 cut(s)	46, 78, 162, 378, 487, 1090
PscI	ACATGT	1 cut(s)	1126
PshAI	GACNNNNGTC	1 cut(s)	869
Psp124BI	GAGCTC	1 cut(s)	654
Psp6I	CCWGG	2 cut(s)	153, 468
PspCI	CACGTG	5 cut(s)	46, 78, 162, 487, 1090
PspGI	CCWGG	2 cut(s)	153, 468
PspLI	CGTACG	1 cut(s)	191
PspN4I	GGNNCC	8 cut(s)	113, 137, 287, 386, 498, 524, 740, 970
PspOMI	GGGCCC	1 cut(s)	522
PsrI	GAACNNNNNNTAC	2 cut(s)	992, 1024
PteI	GCGCGC	2 cut(s)	82, 780
RsaI	GTAC	7 cut(s)	176, 193, 380, 599, 839, 1010, 1073
RsaNI	GTAC	7 cut(s)	175, 192, 379, 598, 838, 1009, 1072
RseI	CAYNNNNRTG	1 cut(s)	485
SacI	GAGCTC	1 cut(s)	654
SapI	GCTCTTC	1 cut(s)	642
SaqAI	TTAA	1 cut(s)	30
SatI	GCNGC	5 cut(s)	319, 574, 882, 923, 1134
Sau3AI	GATC	1 cut(s)	432
SchI	GAGTC	4 cut(s)	136, 286, 336, 795
ScrFI	CCNGG	9 cut(s)	155, 418, 419, 470, 501, 612, 737, 743, 973
SduI	GDGCHC	5 cut(s)	501, 526, 654, 776, 1089
SfaNI	GCATC	3 cut(s)	196, 253, 1138
SfoI	GGCGCC	2 cut(s)	113, 970
SgrAI	CRCCGGYG	2 cut(s)	602, 1025
SgsI	GGCGCGCC	1 cut(s)	82
SinI	GGWCC	2 cut(s)	100, 739
SmaI	CCCGGG	1 cut(s)	419
SmiMI	CAYNNNNRTG	1 cut(s)	485
SphI	GCATGC	1 cut(s)	21
Sse9I	AATT	1 cut(s)	445
SspDI	GGCGCC	2 cut(s)	111, 968
SspMI	CTAG	2 cut(s)	198, 915
SstI	GAGCTC	1 cut(s)	654
StyD4I	CCNGG	9 cut(s)	153, 416, 417, 468, 499, 610, 735, 741, 971
TaaI	ACNGT	1 cut(s)	638
TaqI	TCGA	2 cut(s)	348, 798
TaqII	GACCGA	3 cut(s)	692, 728, 881
TasI	AATT	1 cut(s)	445
TatI	WGTACW	2 cut(s)	837, 1071
TauI	GCSGC	4 cut(s)	321, 884, 925, 1136
TfiI	GAWTC	1 cut(s)	849
Tru1I	TTAA	1 cut(s)	30
Tru9I	TTAA	1 cut(s)	30
TscAI	CASTG	1 cut(s)	1161
TseFI	GTSAC	3 cut(s)	46, 745, 856
TseI	GCWGC	1 cut(s)	573
Tsp45I	GTSAC	3 cut(s)	46, 745, 856
TspDTI	ATGAA	1 cut(s)	1013
TspGWI	ACGGA	2 cut(s)	825, 1134
TspMI	CCCGGG	1 cut(s)	417
TspRI	CASTG	1 cut(s)	1161
Van91I	CCANNNNNTGG	1 cut(s)	541
VneI	GTGCAC	1 cut(s)	772
VpaK11BI	GGWCC	2 cut(s)	100, 739
XagI	CCTNNNNNAGG	1 cut(s)	152
XceI	RCATGY	3 cut(s)	21, 709, 1130
XmaI	CCCGGG	1 cut(s)	417
XmiI	GTMKAC	1 cut(s)	180
XspI	CTAG	2 cut(s)	198, 915
ZraI	GACGTC	1 cut(s)	871
Zsp2I	ATGCAT	1 cut(s)	23

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.