Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0012714

Physical Location & Seq

Genomic Coordinates Reverse (-)

1132260 .. 1134665

Gene Structure 2406 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g00550.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2406 bp

ATGCAGCCAGTTCGTCCGCAAGGCCCTCATAGCCATGAAGAAGACTACGACCTCAAGGACACCAACCCTCAACTTGGTGAGAGGTGGCCAAATGGTGGAGCATATGGAGGACGAGGATGGATGAGTGGTGGTGAGAGATTTGCAAGCACTTATGACCTTGTTGAGCAGATGTTTTATCTCTATGTTCGAGTTGTGAAGGCCAAAGATCTCCCTCCCAGCTCTATTACCGCAAGCTGTGATCCTTATGTGGAAGTAAAGCTGGGGAACTACAAGGGAAGAACAAAGCATTTTGAGAGGAAAATGAATCCAGAGTGGAACCAGGTCTTTGCTTTCTCAAAAGACCGCATTCAGTCGTCTGTGCTAGAAGTTTTTGTGAAAGACAAAGAGATGATTGGAAGAGATGATTATCTTGGAAGAGTGGTTTTTGACTTGAATGAGATTCCCACCAGAGTTCCACCTGATAGTCCACTTGCTCCTCAGTGGTACAGACTTGAGCACCGCCGCGGAGAAGGCAAGGTTAGAGGTGAAATCATGGTTGCAGTTTGGATGGGAACACAGGCTGATGAAGCATTTCCAGATGCATGGCATTCAGACGCAGCAGCAGTCTATGGTGAAGGTGTTCACAATATCCGATCCAAGGTATACGTCTCACCAAAATTGTGGTACCTTAGAGTAAATGTGATTGAAGCTCAAGATGTGCTGCCTAATGACAGAAGCCACCTCCCAGAAGTTTTTGTGAAAGCTCAGGTTGGAAACCAGGTCCTCAGAACCAAGATATGCCCAACTCATACTGCTAATCCATTATGGAATGAAGATTTAGTCTTTGTGGCAGCTGAACCTTTTGAAGAGCAACTGATCATCACTGTTGAAGATCGAGTCCACCCTACGAAAGATGAGGTGCTGGGAAAGATGAGCATGCCCATTGACATGTTTGAGAAGCGGCTTGACCACAGGCCAGTTCATTCGCGTTGGTTCAACCTTGAGAAGTATGGCTTTGGTGTCTTGGAACCTGATAGGAGGAAAGAGCTCAAGTTTTCTAGTAGAATTCACCTGAGAGTCTGTCTTGAAGGTGGATACCATGTACTAGATGAATCAACCATGTACATAAGTGATCAAAGGCCAACTGCAAGACAGCTGTGGAAGCAGCCTGTTGGGATTTTGGAAGTGGGGATTCTAAGTGCACAAGGGTTTCTTCCAATGAAGATGAAGGACGGCCGAGGAAGTACAGATGCTTATTGTGTAGCTAAATATGGCCAGAAATGGGTTCGCACCAGAACAATTCTTGACACACTCAGTCCTAAATGGAATGAGCAGTACACATGGGAAGTTTATGATCCCTGCACCGTCATAACGTTGGGAGTTTTCGACAATTGCCACCTTGGTGGCGCTGAGAGACCAACACCAATGGCAGCCAGTGCAGCAAGAGATTCACGAATCGGCAAGGTACGCATTCGACTATCAACACTTGAAGCTCATCGAATGTATACACACTCATACCCTCTCCTCGTTCTGCAACCTAATGGAGTAAAGAAAATGGGAGACCTCCAACTAGCAATTCGGTTCACCACCCTGTCTCTAGCTAACATGATCTATGTTTATGGACACCCTTTGCTGCCAAAAATGCATTACTTGCATCCTTTCACAGTGAACCAAGTAGACAATTTACGATACCAAGCAATGAACATTGTAGCAGTGAGGCTTGGCAGAGCTGAACCCCCACTTAGAAAGGAGGTGGTAGAGTACATGCTAGATGTTGATTCACACATGTGGAGCATGAGAAGGAGCAAAGCCAACTTCTTTCGAATCATGTCACTACTTTCCAGCATGTTCTCCATGAGCAGATGGTTTGGTGATGTATGCAACTGGAAAAACTCCATGACAACAGTTCTCGTTCACATCCTTTTTCTGATACTGATTTGGTATCCAGAGTTGATACTTCCAACTCTTTTTGTCTACATGTTCCTCATTGGAATATGGAACTACAGATTCAGGCCTAGACATCCTCCTCATATGGATATCAAGCTTTCATGGGCTGAAGCAGTTCACCCGGATGAGCTTGACGAAGAATTTGACACATTTCCAAGCTCAAGACCGCATGACATTGTTCGAATGAGGTACGACAGGATTAGAAGCGTAGCAGGGAGGATACAGACTGTTGTGGGTGATATAGCAACACAAGGCGAAAGGTTTCAGTCTCTACTCAGCTGGAGAGACCCAAGAGCAACCAGCCTTTTCATAATATTCAGTCTTTGTGCAGCTGTGGTTCTTTATGCGACCCCCTTCCGAGTGGTTGCTTTGATTGCAGGATTGTATTACTTGAGGCACCCAAGGTTTCGTAGCAAGCTGCCTTCTGCACCAAGCAATTTCTTCAGGAGATTATCAGCTCGAGCAGACAGCTTATTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005783 GO:0005829 GO:0012505 GO:0016020 GO:0016021 GO:0031224 GO:0031974 GO:0031981 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046872 GO:0070013

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 PRT_C

Protein Analysis

802

Amino Acids

92.62

Weight (kDa)

9.09

Isoelectric Point (pI)

49.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	59 - 164	1.7e-22	C2 domain
C2	PF00168	221 - 327	3e-19	C2 domain
C2	PF00168	385 - 501	1.8e-19	C2 domain
PRT_C	PF08372	646 - 801	3.9e-79	Plant phosphoribosyltransferase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012714)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48060
fragaria_vesca	FvH4_7g00550
malus_domestica	MD02G1316600.v1.1 MD07G1005400.v1.1 MD14G1009800.v1.1
prunus_persica	Prupe.2G007600_v2.0.a1
pyrus_communis	pycom02g26530 pycom07g00440
rosa_chinensis	RchiOBHm_Chr1g0314341
rosa_laevigata	RLG00000030765
rosa_multiflora	Rmu_sc0000343.1_g000010 Rmu_sc0002833.1_g000008
rosa_roxburghii	Rroxscaffold_4G00331940
rosa_rugosa	Rorug01G0001200
rosa_samantha	Rh1AG010300 Rh1BG003200 Rh1DG005700
rosa_wichuraiana	Rw1G000480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	663
AccB1I	GGYRCC	2 cut(s)	663, 2322
AccB7I	CCANNNNNTGG	1 cut(s)	95
AccI	GTMKAC	4 cut(s)	642, 1484, 1656, 1953
AccII	CGCG	2 cut(s)	504, 967
AciI	CCGC	8 cut(s)	17, 228, 343, 499, 502, 504, 940, 2093
AclI	AACGTT	1 cut(s)	1352
AclWI	GGATC	3 cut(s)	233, 627, 1328
AcoI	YGGCCR	3 cut(s)	86, 1213, 1252
AcsI	RAATTY	2 cut(s)	1044, 2066
AcuI	CTGAAG	2 cut(s)	2055, 2353
AfaI	GTAC	9 cut(s)	485, 665, 1083, 1103, 1225, 1316, 1446, 1742, 2117
AfiI	CCNNNNNNNGG	4 cut(s)	74, 95, 637, 1261
AflIII	ACRYGT	3 cut(s)	927, 1764, 1956
AgsI	TTSAA	7 cut(s)	433, 686, 845, 869, 976, 1067, 1469
AjnI	CCWGG	2 cut(s)	318, 756
AjuI	GAANNNNNNNTTGG	2 cut(s)	1539, 1571
AleI	CACNNNNGTG	2 cut(s)	1380, 1765
Alw21I	GWGCWC	3 cut(s)	498, 1029, 1183
Alw26I	GTCTC	6 cut(s)	652, 1387, 1533, 1578, 2199, 2205
Alw44I	GTGCAC	1 cut(s)	1179
AlwI	GGATC	3 cut(s)	233, 627, 1328
Ama87I	CYCGRG	1 cut(s)	2385
AoxI	GGCC	8 cut(s)	22, 86, 198, 953, 1118, 1213, 1252, 1991
ApaLI	GTGCAC	1 cut(s)	1179
ApoI	RAATTY	2 cut(s)	1044, 2066
ArsI	GACNNNNNNTTYG	2 cut(s)	2051, 2083
Asp700I	GAANNNNTTC	4 cut(s)	570, 618, 2040, 2187
Asp718I	GGTACC	1 cut(s)	663
AspLEI	GCGC	1 cut(s)	1388
AspS9I	GGNCC	2 cut(s)	23, 760
AsuC2I	CCSGG	1 cut(s)	2048
AsuII	TTCGAA	2 cut(s)	1801, 2107
AvaI	CYCGRG	1 cut(s)	2385
AvaII	GGWCC	1 cut(s)	760
BaeGI	GKGCMC	1 cut(s)	1183
BalI	TGGCCA	2 cut(s)	88, 1254
BanI	GGYRCC	2 cut(s)	663, 2322
BanII	GRGCYC	1 cut(s)	1029
BbsI	GAAGAC	1 cut(s)	48
Bbv12I	GWGCWC	3 cut(s)	498, 1029, 1183
BccI	CCATC	3 cut(s)	111, 541, 1836
BceAI	ACGGC	1 cut(s)	1228
BcgI	CGANNNNNNTGC	1 cut(s)	27
BciT130I	CCWGG	2 cut(s)	320, 758
BciVI	GTATCC	3 cut(s)	1067, 1932, 2139
BclI	TGATCA	2 cut(s)	855, 1111
BcnI	CCSGG	1 cut(s)	2048
BcoDI	GTCTC	6 cut(s)	652, 1387, 1533, 1578, 2199, 2205
BfaI	CTAG	7 cut(s)	362, 1038, 1085, 1550, 1577, 1748, 1995
BfmI	CTRYAG	1 cut(s)	1981
BfoI	RGCGCY	1 cut(s)	1389
BfuI	GTATCC	3 cut(s)	1067, 1932, 2139
BglII	AGATCT	1 cut(s)	205
Bme1390I	CCNGG	3 cut(s)	320, 758, 2048
Bme18I	GGWCC	1 cut(s)	760
BmeT110I	CYCGRG	1 cut(s)	2385
BmgT120I	GGNCC	2 cut(s)	23, 760
BmiI	GGNNCC	4 cut(s)	317, 665, 1008, 2324
BmrFI	CCNGG	3 cut(s)	320, 758, 2048
BmsI	GCATC	3 cut(s)	568, 1219, 1642
BpiI	GAAGAC	1 cut(s)	48
BpmI	CTGGAG	1 cut(s)	2227
Bpu10I	CCTNAGC	1 cut(s)	744
Bpu14I	TTCGAA	2 cut(s)	1801, 2107
BpuEI	CTTGAG	7 cut(s)	38, 512, 675, 1001, 1013, 2071, 2338
BpuMI	CCSGG	1 cut(s)	2048
BsaBI	GATNNNNATC	1 cut(s)	405
BsaI	GGTCTC	3 cut(s)	1387, 1533, 2205
BsaJI	CCNNGG	5 cut(s)	502, 636, 1216, 1378, 2327
Bsc4I	CCNNNNNNNGG	4 cut(s)	74, 95, 637, 1261
Bse1I	ACTGG	4 cut(s)	8, 956, 1413, 1868
Bse3DI	GCAATG	1 cut(s)	1683
Bse8I	GATNNNNATC	1 cut(s)	405
BseBI	CCWGG	2 cut(s)	320, 758
BseDI	CCNNGG	5 cut(s)	502, 636, 1216, 1378, 2327
BseGI	GGATG	7 cut(s)	122, 126, 552, 1633, 1896, 1999, 2056
BseJI	GATNNNNATC	1 cut(s)	405
BseLI	CCNNNNNNNGG	4 cut(s)	74, 95, 637, 1261
BseMI	GCAATG	1 cut(s)	1683
BseMII	CTCAG	7 cut(s)	491, 758, 778, 1043, 1306, 1380, 2215
BseNI	ACTGG	4 cut(s)	8, 956, 1413, 1868
BseRI	GAGGAG	3 cut(s)	465, 1493, 1995
BseSI	GKGCMC	1 cut(s)	1183
BseX3I	CGGCCG	1 cut(s)	1213
BseYI	CCCAGC	3 cut(s)	215, 259, 901
BsgI	GTGCAG	4 cut(s)	1324, 1437, 2274, 2337
Bsh1236I	CGCG	2 cut(s)	504, 967
Bsh1285I	CGRYCG	1 cut(s)	1216
BshFI	GGCC	8 cut(s)	24, 88, 200, 955, 1120, 1215, 1254, 1993
BshNI	GGYRCC	2 cut(s)	663, 2322
BsiEI	CGRYCG	1 cut(s)	1216
BsiHKAI	GWGCWC	3 cut(s)	498, 1029, 1183
BsiHKCI	CYCGRG	1 cut(s)	2385
BsiSI	CCGG	1 cut(s)	2048
BslI	CCNNNNNNNGG	4 cut(s)	74, 95, 637, 1261
BsmAI	GTCTC	6 cut(s)	652, 1387, 1533, 1578, 2199, 2205
BsmBI	CGTCTC	1 cut(s)	652
BsmI	GAATGC	3 cut(s)	345, 586, 1449
BsnI	GGCC	8 cut(s)	24, 88, 200, 955, 1120, 1215, 1254, 1993
Bso31I	GGTCTC	3 cut(s)	1387, 1533, 2205
BsoBI	CYCGRG	1 cut(s)	2385
Bsp119I	TTCGAA	2 cut(s)	1801, 2107
Bsp1286I	GDGCHC	3 cut(s)	498, 1029, 1183
Bsp1407I	TGTACA	1 cut(s)	1101
Bsp143I	GATC	8 cut(s)	205, 238, 632, 855, 871, 1111, 1333, 1587
BspACI	CCGC	8 cut(s)	17, 228, 343, 499, 502, 504, 940, 2093
BspANI	GGCC	8 cut(s)	24, 88, 200, 955, 1120, 1215, 1254, 1993
BspCNI	CTCAG	7 cut(s)	490, 757, 777, 1044, 1305, 1381, 2214
BspFNI	CGCG	2 cut(s)	504, 967
BspLI	GGNNCC	4 cut(s)	317, 665, 1008, 2324
BspPI	GGATC	3 cut(s)	233, 627, 1328
BspQI	GCTCTTC	1 cut(s)	840
BspT104I	TTCGAA	2 cut(s)	1801, 2107
BspT107I	GGYRCC	2 cut(s)	663, 2322
BspTNI	GGTCTC	3 cut(s)	1387, 1533, 2205
BsrDI	GCAATG	1 cut(s)	1683
BsrGI	TGTACA	1 cut(s)	1101
BsrI	ACTGG	4 cut(s)	8, 956, 1413, 1868
BssECI	CCNNGG	5 cut(s)	502, 636, 1216, 1378, 2327
BssMI	GATC	8 cut(s)	205, 238, 632, 855, 871, 1111, 1333, 1587
BssNAI	GTATAC	2 cut(s)	643, 1485
BssT1I	CCWWGG	3 cut(s)	636, 1378, 2327
Bst1107I	GTATAC	2 cut(s)	643, 1485
Bst2UI	CCWGG	2 cut(s)	320, 758
Bst4CI	ACNGT	5 cut(s)	865, 1345, 1645, 1885, 2155
Bst6I	CTCTTC	3 cut(s)	391, 409, 840
BstAPI	GCANNNNNTGC	2 cut(s)	1415, 1630
BstAUI	TGTACA	1 cut(s)	1101
BstBI	TTCGAA	2 cut(s)	1801, 2107
BstC8I	GCNNGC	4 cut(s)	145, 232, 917, 2342
BstDSI	CCRYGG	1 cut(s)	502
BstF5I	GGATG	7 cut(s)	122, 126, 552, 1633, 1896, 1999, 2056
BstFNI	CGCG	2 cut(s)	504, 967
BstH2I	RGCGCY	1 cut(s)	1389
BstHHI	GCGC	1 cut(s)	1388
BstKTI	GATC	8 cut(s)	208, 241, 635, 858, 874, 1114, 1336, 1590
BstMAI	GTCTC	6 cut(s)	652, 1387, 1533, 1578, 2199, 2205
BstMBI	GATC	8 cut(s)	205, 238, 632, 855, 871, 1111, 1333, 1587
BstMCI	CGRYCG	1 cut(s)	1216
BstNI	CCWGG	2 cut(s)	320, 758
BstNSI	RCATGY	6 cut(s)	919, 931, 1747, 1768, 1828, 1960
BstSCI	CCNGG	3 cut(s)	318, 756, 2046
BstSFI	CTRYAG	1 cut(s)	1981
BstSLI	GKGCMC	1 cut(s)	1183
BstUI	CGCG	2 cut(s)	504, 967
BstV2I	GAAGAC	1 cut(s)	48
BstX2I	RGATCY	1 cut(s)	205
BstXI	CCANNNNNNTGG	3 cut(s)	582, 660, 1382
BstYI	RGATCY	1 cut(s)	205
BstZ17I	GTATAC	2 cut(s)	643, 1485
BstZI	CGGCCG	1 cut(s)	1213
BsuI	GTATCC	3 cut(s)	1067, 1932, 2139
BsuRI	GGCC	8 cut(s)	24, 88, 200, 955, 1120, 1215, 1254, 1993
BtgI	CCRYGG	1 cut(s)	502
BtsCI	GGATG	7 cut(s)	122, 126, 552, 1633, 1896, 1999, 2056
BtsI	GCAGTG	1 cut(s)	1698
BtsIMutI	CAGTG	5 cut(s)	485, 861, 1420, 1650, 1698
Cac8I	GCNNGC	4 cut(s)	145, 232, 917, 2342
CfoI	GCGC	1 cut(s)	1388
Cfr13I	GGNCC	2 cut(s)	23, 760
Cfr42I	CCGCGG	1 cut(s)	505
CseI	GACGC	1 cut(s)	602
CsiI	ACCWGGT	2 cut(s)	318, 756
Csp6I	GTAC	9 cut(s)	484, 664, 1082, 1102, 1224, 1315, 1445, 1741, 2116
CviQI	GTAC	9 cut(s)	484, 664, 1082, 1102, 1224, 1315, 1445, 1741, 2116
DpnI	GATC	8 cut(s)	207, 240, 634, 857, 873, 1113, 1335, 1589
DpnII	GATC	8 cut(s)	205, 238, 632, 855, 871, 1111, 1333, 1587
EaeI	YGGCCR	3 cut(s)	86, 1213, 1252
EagI	CGGCCG	1 cut(s)	1213
Eam1104I	CTCTTC	3 cut(s)	391, 409, 840
EarI	CTCTTC	3 cut(s)	391, 409, 840
Ecl136II	GAGCTC	1 cut(s)	1027
EclXI	CGGCCG	1 cut(s)	1213
Eco130I	CCWWGG	3 cut(s)	636, 1378, 2327
Eco147I	AGGCCT	1 cut(s)	1993
Eco24I	GRGCYC	1 cut(s)	1029
Eco31I	GGTCTC	3 cut(s)	1387, 1533, 2205
Eco32I	GATATC	1 cut(s)	2017
Eco47I	GGWCC	1 cut(s)	760
Eco52I	CGGCCG	1 cut(s)	1213
Eco53kI	GAGCTC	1 cut(s)	1027
Eco57I	CTGAAG	2 cut(s)	2055, 2353
Eco88I	CYCGRG	1 cut(s)	2385
EcoICRI	GAGCTC	1 cut(s)	1027
EcoO109I	RGGNCCY	2 cut(s)	23, 760
EcoRI	GAATTC	1 cut(s)	1044
EcoRII	CCWGG	2 cut(s)	318, 756
EcoRV	GATATC	1 cut(s)	2017
EcoT14I	CCWWGG	3 cut(s)	636, 1378, 2327
EcoT22I	ATGCAT	2 cut(s)	583, 1626
EcoT38I	GRGCYC	1 cut(s)	1029
ErhI	CCWWGG	3 cut(s)	636, 1378, 2327
Esp3I	CGTCTC	1 cut(s)	652
FalI	AAGNNNNNCTT	4 cut(s)	977, 1009, 1176, 1208
FauNDI	CATATG	2 cut(s)	103, 2010
FbaI	TGATCA	2 cut(s)	855, 1111
FblI	GTMKAC	4 cut(s)	642, 1484, 1656, 1953
FokI	GGATG	7 cut(s)	129, 133, 559, 1620, 1883, 1986, 2063
FriOI	GRGCYC	1 cut(s)	1029
FspBI	CTAG	7 cut(s)	362, 1038, 1085, 1550, 1577, 1748, 1995
GlaI	GCGC	1 cut(s)	1387
GsaI	CCCAGC	3 cut(s)	219, 263, 905
GsuI	CTGGAG	1 cut(s)	2227
HaeII	RGCGCY	1 cut(s)	1389
HaeIII	GGCC	8 cut(s)	24, 88, 200, 955, 1120, 1215, 1254, 1993
HapII	CCGG	1 cut(s)	2048
HgaI	GACGC	1 cut(s)	602
HhaI	GCGC	1 cut(s)	1388
Hin6I	GCGC	1 cut(s)	1386
HinP1I	GCGC	1 cut(s)	1386
HindIII	AAGCTT	1 cut(s)	2021
HpaII	CCGG	1 cut(s)	2048
Hpy188I	TCNGA	5 cut(s)	592, 632, 767, 1908, 2285
Hpy188III	TCNNGA	9 cut(s)	308, 575, 692, 1064, 1283, 1431, 1925, 2088, 2371
HpyAV	CCTTC	8 cut(s)	190, 503, 608, 1061, 1201, 1773, 2290, 2358
HpyCH4III	ACNGT	5 cut(s)	865, 1345, 1645, 1885, 2155
HpyCH4IV	ACGT	2 cut(s)	645, 1352
HpySE526I	ACGT	2 cut(s)	645, 1352
HspAI	GCGC	1 cut(s)	1386
KpnI	GGTACC	1 cut(s)	667
Ksp22I	TGATCA	2 cut(s)	855, 1111
KspI	CCGCGG	1 cut(s)	505
Kzo9I	GATC	8 cut(s)	205, 238, 632, 855, 871, 1111, 1333, 1587
LguI	GCTCTTC	1 cut(s)	840
LmnI	GCTCC	4 cut(s)	98, 478, 1770, 1782
LweI	GCATC	3 cut(s)	568, 1219, 1642
MabI	ACCWGGT	2 cut(s)	318, 756
MaeI	CTAG	7 cut(s)	362, 1038, 1085, 1550, 1577, 1748, 1995
MaeII	ACGT	2 cut(s)	645, 1352
MaeIII	GTNAC	1 cut(s)	1809
MalI	GATC	8 cut(s)	207, 240, 634, 857, 873, 1113, 1335, 1589
MboI	GATC	8 cut(s)	205, 238, 632, 855, 871, 1111, 1333, 1587
MfeI	CAATTG	1 cut(s)	1369
MflI	RGATCY	1 cut(s)	205
MhlI	GDGCHC	3 cut(s)	498, 1029, 1183
MlsI	TGGCCA	2 cut(s)	88, 1254
MluCI	AATT	8 cut(s)	656, 1044, 1278, 1369, 1554, 1660, 2066, 2362
MluNI	TGGCCA	2 cut(s)	88, 1254
MlyI	GAGTC	2 cut(s)	885, 1065
MmeI	TCCRAC	3 cut(s)	730, 1570, 1964
Mox20I	TGGCCA	2 cut(s)	88, 1254
Mph1103I	ATGCAT	2 cut(s)	583, 1626
MroXI	GAANNNNTTC	4 cut(s)	570, 618, 2040, 2187
MscI	TGGCCA	2 cut(s)	88, 1254
MslI	CAYNNNNRTG	5 cut(s)	33, 926, 1380, 1765, 2049
Msp20I	TGGCCA	2 cut(s)	88, 1254
MspA1I	CMGCKG	5 cut(s)	504, 833, 1135, 2205, 2258
MspI	CCGG	1 cut(s)	2048
MspR9I	CCNGG	3 cut(s)	320, 758, 2048
MunI	CAATTG	1 cut(s)	1369
Mva1269I	GAATGC	3 cut(s)	345, 586, 1449
MvaI	CCWGG	2 cut(s)	320, 758
MvnI	CGCG	2 cut(s)	504, 967
NciI	CCSGG	1 cut(s)	2048
NdeI	CATATG	2 cut(s)	103, 2010
NdeII	GATC	8 cut(s)	205, 238, 632, 855, 871, 1111, 1333, 1587
NlaIV	GGNNCC	4 cut(s)	317, 665, 1008, 2324
NmeAIII	GCCGAG	1 cut(s)	1241
NmuCI	GTSAC	1 cut(s)	1809
NsiI	ATGCAT	2 cut(s)	583, 1626
NspI	RCATGY	6 cut(s)	919, 931, 1747, 1768, 1828, 1960
NspV	TTCGAA	2 cut(s)	1801, 2107
OliI	CACNNNNGTG	2 cut(s)	1380, 1765
PaeI	GCATGC	1 cut(s)	919
PaeR7I	CTCGAG	1 cut(s)	2385
PceI	AGGCCT	1 cut(s)	1993
PciI	ACATGT	3 cut(s)	927, 1764, 1956
PciSI	GCTCTTC	1 cut(s)	840
PctI	GAATGC	3 cut(s)	345, 586, 1449
PdmI	GAANNNNTTC	4 cut(s)	570, 618, 2040, 2187
PfeI	GAWTC	9 cut(s)	304, 439, 1091, 1171, 1427, 1434, 1757, 1803, 1986
PflMI	CCANNNNNTGG	1 cut(s)	95
PleI	GAGTC	2 cut(s)	884, 1064
PpsI	GAGTC	2 cut(s)	884, 1064
PpuMI	RGGWCCY	1 cut(s)	760
PscI	ACATGT	3 cut(s)	927, 1764, 1956
Psp124BI	GAGCTC	1 cut(s)	1029
Psp1406I	AACGTT	1 cut(s)	1352
Psp5II	RGGWCCY	1 cut(s)	760
Psp6I	CCWGG	2 cut(s)	318, 756
PspFI	CCCAGC	3 cut(s)	215, 259, 901
PspGI	CCWGG	2 cut(s)	318, 756
PspN4I	GGNNCC	4 cut(s)	317, 665, 1008, 2324
PspPI	GGNCC	2 cut(s)	23, 760
PspPPI	RGGWCCY	1 cut(s)	760
PspXI	VCTCGAGB	1 cut(s)	2385
PsuI	RGATCY	1 cut(s)	205
PvuII	CAGCTG	4 cut(s)	833, 1135, 2205, 2258
RsaI	GTAC	9 cut(s)	485, 665, 1083, 1103, 1225, 1316, 1446, 1742, 2117
RsaNI	GTAC	9 cut(s)	484, 664, 1082, 1102, 1224, 1315, 1445, 1741, 2116
RseI	CAYNNNNRTG	5 cut(s)	33, 926, 1380, 1765, 2049
SacI	GAGCTC	1 cut(s)	1029
SacII	CCGCGG	1 cut(s)	505
SapI	GCTCTTC	1 cut(s)	840
Sau3AI	GATC	8 cut(s)	205, 238, 632, 855, 871, 1111, 1333, 1587
Sau96I	GGNCC	2 cut(s)	23, 760
SchI	GAGTC	2 cut(s)	885, 1065
ScrFI	CCNGG	3 cut(s)	320, 758, 2048
SduI	GDGCHC	3 cut(s)	498, 1029, 1183
SexAI	ACCWGGT	2 cut(s)	318, 756
SfaNI	GCATC	3 cut(s)	568, 1219, 1642
SfcI	CTRYAG	1 cut(s)	1981
Sfr274I	CTCGAG	1 cut(s)	2385
Sfr303I	CCGCGG	1 cut(s)	505
SfuI	TTCGAA	2 cut(s)	1801, 2107
SgrBI	CCGCGG	1 cut(s)	505
SinI	GGWCC	1 cut(s)	760
SlaI	CTCGAG	1 cut(s)	2385
SmiMI	CAYNNNNRTG	5 cut(s)	33, 926, 1380, 1765, 2049
SmlI	CTYRAG	8 cut(s)	53, 491, 690, 980, 1028, 2086, 2317, 2385
SmoI	CTYRAG	8 cut(s)	53, 491, 690, 980, 1028, 2086, 2317, 2385
SphI	GCATGC	1 cut(s)	919
Sse9I	AATT	8 cut(s)	656, 1044, 1278, 1369, 1554, 1660, 2066, 2362
SseBI	AGGCCT	1 cut(s)	1993
SsiI	CCGC	8 cut(s)	17, 228, 343, 499, 502, 504, 940, 2093
SspI	AATATT	1 cut(s)	2241
SspMI	CTAG	7 cut(s)	362, 1038, 1085, 1550, 1577, 1748, 1995
SstI	GAGCTC	1 cut(s)	1029
StuI	AGGCCT	1 cut(s)	1993
StyD4I	CCNGG	3 cut(s)	318, 756, 2046
StyI	CCWWGG	3 cut(s)	636, 1378, 2327
TaaI	ACNGT	5 cut(s)	865, 1345, 1645, 1885, 2155
TaiI	ACGT	2 cut(s)	648, 1355
TaqI	TCGA	8 cut(s)	187, 874, 1365, 1453, 1477, 1801, 2107, 2386
TasI	AATT	8 cut(s)	656, 1044, 1278, 1369, 1554, 1660, 2066, 2362
TatI	WGTACW	5 cut(s)	1081, 1101, 1223, 1314, 1740
TauI	GCSGC	2 cut(s)	504, 943
TfiI	GAWTC	9 cut(s)	304, 439, 1091, 1171, 1427, 1434, 1757, 1803, 1986
TscAI	CASTG	5 cut(s)	485, 868, 1420, 1650, 1698
TseFI	GTSAC	1 cut(s)	1809
Tsp45I	GTSAC	1 cut(s)	1809
TspRI	CASTG	5 cut(s)	485, 868, 1420, 1650, 1698
Van91I	CCANNNNNTGG	1 cut(s)	95
VneI	GTGCAC	1 cut(s)	1179
VpaK11BI	GGWCC	1 cut(s)	760
XapI	RAATTY	2 cut(s)	1044, 2066
XceI	RCATGY	6 cut(s)	919, 931, 1747, 1768, 1828, 1960
XhoI	CTCGAG	1 cut(s)	2385
XmiI	GTMKAC	4 cut(s)	642, 1484, 1656, 1953
XmnI	GAANNNNTTC	4 cut(s)	570, 618, 2040, 2187
XspI	CTAG	7 cut(s)	362, 1038, 1085, 1550, 1577, 1748, 1995
Zsp2I	ATGCAT	2 cut(s)	583, 1626

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.