Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0012714

Physical Location & Seq

Genomic Coordinates Forward (+)

67031863 .. 67035096

Gene Structure 3234 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000030765

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3036 bp

ATGAAGCTGGTGGTAGAAGTTGTAGATGCTCATGATCTTATGCCCAAAGACGGAGAGGGGTCTGCTAGTCCATTTGTAGAAGTTGATTTTGTGAACCAGCTTAGCCGAACCAAAACTATTCCAAAGAACCTCAACCCCATTTGGAACCAGAAACTTGTCTTCGACATCCACCAAACTGAAAACTTCCATCACAAAACCATTGAAGTCTCTGTGTACAACGAGAGGAGAGTCCCTATTCCTGGCCGACATTTCCTTGGAAGTGTAAGAATTCCTTGCTCAAATACTGTTAAAAAAGGCAAGGAAGCTTATCAAAGATTCCAACTAGAGAAGAAGTGGTTTTTCTCATCTGTCAAGGGTGAGATTGGCCTAAAAATCTATATTTCACTAGAATCTGAACCAAAATCTCCTCTACCCCAAACACTAGAAGCCCCTCCTTCCAAGTCTCATCAACCACCAGACATACACAAAGTCCTGTCTCATACCAAAGTATTCGCTGCTGTTCCGAAAGCTGTTGCTACTGTTTCTTTGATTGGTACTTCCTCTGCTCCAGATCCAAAGAAGGAGACGAAGGAAGCAGTAACATTCCATCACCTACAAAAATATCAAGTGCAGAAAGCAGCAGGCATAACCATGCAGCCAGTTCGTCCACAAGCCCCTCATAGCTACGAAGAAGACTACGACCTCAAGGACACCAACCCTCAGCTTGGTGAGAGGTGGCCAAATGGTGGAGCATACGGAGGAAGAGGATGGATGAGTGGTGGTGAGAGATTTGCAAGCACTTATGACCTTGTTGAGCAGATGTTTTATCTCTATGTTCGAGTTGTGAAGGCCAAAGATCTCCCTCCCAGCGCCATTACCGCAAGTTGTGATCCTTATGTGGAAGTAAAGCTGGGAAACTATAAGGGAAGAACAAGGCACTTTGAGAGAAAAATGAATCCGGAGTGGAACCAGGTCTTTGCTTTCTCAAAAGACCGCATTCAGTCATCTGTACTAGAAGTTTTTGTCAAAGACAAAGAGATGATTGGAAGAGACGATTATCTTGGAAGAGTGGTTTTTGACTTGAATGAGATTCCCACCAGAGTTCCACCGGATAGCCCACTTGCTCCTCAATGGTACAGACTTGAGCACCGCCGTGGAGAAGGCAAGGTTAGAGGTGAAATCATGGTTGCAGTTTGGATGGGAACACAGGCTGATGAAGCATTCCCAGATGCATGGCATTCAGACGCTGCAACAGTCTACGGTGAAGGTGTTTACAATATCCGATCCAAGGTATACGTCTCACCAAAGCTGTGGTACCTTAGAGTGAATGTGATAGAAGCTCAAGATGTGCTGCCTAATGACAGAAGCCACCTCCCAGAAGTTTTCGTTAAAGCTCAGGTTGGAAACCAAGTCCTCAGAACCAAAATATGCCCAAGTAATACTGCTAATCCACTGTGGAATGAAGATTTAGTCTTTGTGGCAGCTGAACCTTTTGAAGAGCATCTGATTGTCACTGTTGAAGATCGAGTCCACCCTTCAAAAGATGAAGTGCTGGGAAAGATGAGCATGCCCATTGACATGTTTGAGAAGCGGCTTGACCACAGGCCAGTTCATTCGCGCTGGTTCAACCTTGAGAAGTATGGCTTTGGTATCTTGGAAGCTGATAGGAGGAAAGAACTCAAGTTTTCGAGTAGAATTCACCTGAGAGTCTGTCTTGAAGGTGGATACCATGTTCTAGATGAATCAACCATGTACATAAGTGATCAAAGGCCAACTGCAAGGCAGCTGTGGAAGCAGCCTGTTGGGATTTTGGAAGTGGGGATTCTAAGTGCACAAGGGCTTCTTCCAATGAAGATGAAGGATGGCCGAGGAAGTACAGATGCTTATTGTGTAGCTAAATATGGCCAGAAATGGGTTCGCACCAGAACAATTCTCGACACACTGAGTCCTAAATGGAATGAGCAATACACATGGGAAGTTTATGATCCCTGCACCGTGATAACGTTGGGAGTTTTCGACAATTGCCACCTTGGTGGCTCTGAGAAACCAACACCTATGGCAGCCAGTGCAGCAAGAGATTCACGAATTGGCAAGGTACGCATTCGACTGTCAACACTTGAAGCTCATCGAATGTATACACACTCATATCCACTCCTTGTTCTGCAACCTAATGGAGTAAAGAAAATGGGAGAACTCCAACTAGCAGTTCGGTTCACCACCCTATCTCTAGCTAACATGATCTATGTTTATGGACACCCTTTGCTGCCAAAAATGCATTACTTGCATCCTTTCACAGTGAACCAAGTAGACAACTTACGATACCAAGCAATGAACATTGTAGCAGTGAGGCTTGGCAGAGCTGAACCCCCGCTTAGAAAGGAGGTGGTAGAGTACATGTTAGATGTTGATTCACACATGTGGAGCATGAGAAGGAGCAAAGCCAACTTCTTTCGAATCATGTCACTGCTTTCCAGCATGTTCTCCATGAGCAGATGGTTTGGTGATGTATGCAATTGGAAAAACTCCATGACAACAGTCCTCGTTCACATTTTGTTTCTGATACTGATTTGGTACCCGGAGTTGATACTTCCAACTCTTTTTGTCTACATGTTCCTCATTGGAATGTGGAACTATAGATTCAGGCCTAGACATCCTCCTCATATGGATATCAAGCTTTCATGGGCTGAAGCAGTACACCCGGATGAGCTTGATGAAGAATTTGACACATTTCCGAGCTCAAGACCACACGATATTGTTCGAATGAGGTATGACAGGATTAGGAGTGTGGCAGGGAGGATACAGACCGTTGTGGGTGACATAGCAACACAAGGAGAAAGGTTTCAGTCTCTACTCAGCTGGAGAGACCCAAGAGCAACCAGCCTATTCATAATGTTCAGTCTTTGTGCAGCTGTGGTCCTTTATGTGACCCCCTTTAGAGTGGTTGCTTTGATTGCAGGATTGTATTACTTGAGGCACCCAAGGTTTCGCAGCAAGCTGCCTTCCGCACCAAGCAATTTCTTCAGGAGATTATCAGCTCGGGCAGACAGCTTACTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005783 GO:0005829 GO:0012505 GO:0016020 GO:0016021 GO:0031224 GO:0031974 GO:0031981 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046872 GO:0070013

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 PRT_C

Protein Analysis

1012

Amino Acids

116.23

Weight (kDa)

9.23

Isoelectric Point (pI)

45.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	2 - 106	3.7e-20	C2 domain
C2	PF00168	269 - 374	3e-22	C2 domain
C2	PF00168	431 - 537	8.1e-20	C2 domain
C2	PF00168	595 - 711	2.8e-20	C2 domain
PRT_C	PF08372	856 - 1011	2.6e-79	Plant phosphoribosyltransferase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012714)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48060
fragaria_vesca	FvH4_7g00550
malus_domestica	MD02G1316600.v1.1 MD07G1005400.v1.1 MD14G1009800.v1.1
prunus_persica	Prupe.2G007600_v2.0.a1
pyrus_communis	pycom02g26530 pycom07g00440
rosa_chinensis	RchiOBHm_Chr1g0314341
rosa_laevigata	RLG00000030765
rosa_multiflora	Rmu_sc0000343.1_g000010 Rmu_sc0002833.1_g000008
rosa_roxburghii	Rroxscaffold_4G00331940
rosa_rugosa	Rorug01G0001200
rosa_samantha	Rh1AG010300 Rh1BG003200 Rh1DG005700
rosa_wichuraiana	Rw1G000480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	2 cut(s)	1293, 2550
AccB1I	GGYRCC	3 cut(s)	1293, 2550, 2952
AccB7I	CCANNNNNTGG	1 cut(s)	725
AccI	GTMKAC	5 cut(s)	1236, 1272, 2114, 2286, 2583
AccII	CGCG	1 cut(s)	1597
AccIII	TCCGGA	1 cut(s)	937
AciI	CCGC	6 cut(s)	858, 973, 1129, 1570, 2348, 2982
AclI	AACGTT	1 cut(s)	1982
AclWI	GGATC	4 cut(s)	545, 863, 1257, 1958
AcoI	YGGCCR	4 cut(s)	241, 716, 1843, 1882
AcsI	RAATTY	3 cut(s)	267, 1674, 2696
AcuI	CTGAAG	2 cut(s)	2685, 2983
AfiI	CCNNNNNNNGG	6 cut(s)	50, 239, 704, 725, 1267, 1891
AflIII	ACRYGT	4 cut(s)	1557, 2373, 2394, 2586
AgsI	TTSAA	8 cut(s)	203, 1063, 1475, 1499, 1518, 1606, 1697, 2099
AjnI	CCWGG	2 cut(s)	238, 948
AjuI	GAANNNNNNNTTGG	2 cut(s)	2169, 2201
AleI	CACNNNNGTG	3 cut(s)	1131, 2010, 2395
AloI	GAACNNNNNNTCC	2 cut(s)	1695, 1727
Alw21I	GWGCWC	3 cut(s)	1128, 1813, 2717
Alw26I	GTCTC	8 cut(s)	211, 447, 480, 557, 1023, 1282, 2829, 2835
Alw44I	GTGCAC	1 cut(s)	1809
AlwI	GGATC	4 cut(s)	545, 863, 1257, 1958
AlwNI	CAGNNNCTG	1 cut(s)	1226
Ama87I	CYCGRG	1 cut(s)	3015
Aor13HI	TCCGGA	1 cut(s)	937
AoxI	GGCC	9 cut(s)	241, 364, 716, 828, 1583, 1748, 1843, 1882, 2621
ApaLI	GTGCAC	1 cut(s)	1809
ApoI	RAATTY	3 cut(s)	267, 1674, 2696
Asp700I	GAANNNNTTC	1 cut(s)	2817
Asp718I	GGTACC	2 cut(s)	1293, 2550
AspLEI	GCGC	2 cut(s)	851, 1599
AspS9I	GGNCC	1 cut(s)	2893
AsuC2I	CCSGG	2 cut(s)	2555, 2678
AsuII	TTCGAA	2 cut(s)	2431, 2737
AvaI	CYCGRG	1 cut(s)	3015
AvaII	GGWCC	1 cut(s)	2893
BaeGI	GKGCMC	1 cut(s)	1813
BalI	TGGCCA	2 cut(s)	718, 1884
BanI	GGYRCC	3 cut(s)	1293, 2550, 2952
BanII	GRGCYC	1 cut(s)	2717
BbsI	GAAGAC	2 cut(s)	151, 678
Bbv12I	GWGCWC	3 cut(s)	1128, 1813, 2717
BbvCI	CCTCAGC	1 cut(s)	699
BccI	CCATC	6 cut(s)	195, 594, 741, 1171, 1835, 2466
BceAI	ACGGC	1 cut(s)	1116
BcgI	CGANNNNNNTGC	2 cut(s)	623, 657
BciT130I	CCWGG	2 cut(s)	240, 950
BciVI	GTATCC	2 cut(s)	1697, 2769
BclI	TGATCA	1 cut(s)	1741
BcnI	CCSGG	2 cut(s)	2555, 2678
BcoDI	GTCTC	8 cut(s)	211, 447, 480, 557, 1023, 1282, 2829, 2835
BfaI	CTAG	9 cut(s)	66, 323, 386, 422, 992, 1715, 2180, 2207, 2625
BfmI	CTRYAG	1 cut(s)	2611
BfoI	RGCGCY	1 cut(s)	852
BfuI	GTATCC	2 cut(s)	1697, 2769
BglII	AGATCT	1 cut(s)	835
BlpI	GCTNAGC	1 cut(s)	101
Bme1390I	CCNGG	4 cut(s)	240, 950, 2555, 2678
Bme18I	GGWCC	1 cut(s)	2893
BmeT110I	CYCGRG	1 cut(s)	3015
BmgT120I	GGNCC	1 cut(s)	2893
BmiI	GGNNCC	5 cut(s)	146, 947, 1295, 2552, 2954
BmrFI	CCNGG	4 cut(s)	240, 950, 2555, 2678
BmsI	GCATC	5 cut(s)	16, 1198, 1489, 1849, 2272
BoxI	GACNNNNGTC	1 cut(s)	2513
BpiI	GAAGAC	2 cut(s)	151, 678
BpmI	CTGGAG	2 cut(s)	531, 2857
Bpu10I	CCTNAGC	2 cut(s)	699, 1374
Bpu1102I	GCTNAGC	1 cut(s)	101
Bpu14I	TTCGAA	2 cut(s)	2431, 2737
BpuEI	CTTGAG	7 cut(s)	668, 1142, 1305, 1631, 1643, 2701, 2968
BpuMI	CCSGG	2 cut(s)	2555, 2678
BsaI	GGTCTC	1 cut(s)	2835
BsaJI	CCNNGG	6 cut(s)	253, 1132, 1266, 1846, 2008, 2957
BsaWI	WCCGGW	2 cut(s)	937, 1087
Bsc4I	CCNNNNNNNGG	6 cut(s)	50, 239, 704, 725, 1267, 1891
Bse1I	ACTGG	3 cut(s)	638, 1586, 2043
Bse3DI	GCAATG	1 cut(s)	2313
BseAI	TCCGGA	1 cut(s)	937
BseBI	CCWGG	2 cut(s)	240, 950
BseDI	CCNNGG	6 cut(s)	253, 1132, 1266, 1846, 2008, 2957
BseGI	GGATG	8 cut(s)	165, 752, 756, 1182, 1846, 2263, 2629, 2686
BseLI	CCNNNNNNNGG	6 cut(s)	50, 239, 704, 725, 1267, 1891
BseMI	GCAATG	1 cut(s)	2313
BseMII	CTCAG	7 cut(s)	713, 1388, 1408, 1673, 1913, 2010, 2845
BseNI	ACTGG	3 cut(s)	638, 1586, 2043
BseRI	GAGGAG	4 cut(s)	238, 396, 1095, 2625
BseSI	GKGCMC	1 cut(s)	1813
BseYI	CCCAGC	3 cut(s)	845, 889, 1531
BsgI	GTGCAG	4 cut(s)	629, 1954, 2067, 2904
Bsh1236I	CGCG	1 cut(s)	1597
BshFI	GGCC	9 cut(s)	243, 366, 718, 830, 1585, 1750, 1845, 1884, 2623
BshNI	GGYRCC	3 cut(s)	1293, 2550, 2952
BsiHKAI	GWGCWC	3 cut(s)	1128, 1813, 2717
BsiHKCI	CYCGRG	1 cut(s)	3015
BsiSI	CCGG	4 cut(s)	938, 1088, 2555, 2678
BslFI	GGGAC	1 cut(s)	215
BslI	CCNNNNNNNGG	6 cut(s)	50, 239, 704, 725, 1267, 1891
BsmAI	GTCTC	8 cut(s)	211, 447, 480, 557, 1023, 1282, 2829, 2835
BsmBI	CGTCTC	3 cut(s)	557, 1023, 1282
BsmFI	GGGAC	1 cut(s)	215
BsmI	GAATGC	4 cut(s)	975, 1199, 1216, 2079
BsnI	GGCC	9 cut(s)	243, 366, 718, 830, 1585, 1750, 1845, 1884, 2623
Bso31I	GGTCTC	1 cut(s)	2835
BsoBI	CYCGRG	1 cut(s)	3015
Bsp119I	TTCGAA	2 cut(s)	2431, 2737
Bsp1286I	GDGCHC	3 cut(s)	1128, 1813, 2717
Bsp13I	TCCGGA	1 cut(s)	937
Bsp1407I	TGTACA	2 cut(s)	213, 1731
Bsp143I	GATC	9 cut(s)	34, 550, 835, 868, 1262, 1501, 1741, 1963, 2217
Bsp1720I	GCTNAGC	1 cut(s)	101
BspACI	CCGC	6 cut(s)	858, 973, 1129, 1570, 2348, 2982
BspANI	GGCC	9 cut(s)	243, 366, 718, 830, 1585, 1750, 1845, 1884, 2623
BspCNI	CTCAG	7 cut(s)	712, 1387, 1407, 1674, 1914, 2011, 2844
BspEI	TCCGGA	1 cut(s)	937
BspFNI	CGCG	1 cut(s)	1597
BspHI	TCATGA	1 cut(s)	31
BspLI	GGNNCC	5 cut(s)	146, 947, 1295, 2552, 2954
BspPI	GGATC	4 cut(s)	545, 863, 1257, 1958
BspQI	GCTCTTC	1 cut(s)	1470
BspT104I	TTCGAA	2 cut(s)	2431, 2737
BspT107I	GGYRCC	3 cut(s)	1293, 2550, 2952
BspTNI	GGTCTC	1 cut(s)	2835
BsrDI	GCAATG	1 cut(s)	2313
BsrGI	TGTACA	2 cut(s)	213, 1731
BsrI	ACTGG	3 cut(s)	638, 1586, 2043
BssECI	CCNNGG	6 cut(s)	253, 1132, 1266, 1846, 2008, 2957
BssMI	GATC	9 cut(s)	34, 550, 835, 868, 1262, 1501, 1741, 1963, 2217
BssNAI	GTATAC	2 cut(s)	1273, 2115
BssT1I	CCWWGG	4 cut(s)	253, 1266, 2008, 2957
Bst1107I	GTATAC	2 cut(s)	1273, 2115
Bst2UI	CCWGG	2 cut(s)	240, 950
Bst6I	CTCTTC	4 cut(s)	736, 1021, 1039, 1470
BstAPI	GCANNNNNTGC	2 cut(s)	2045, 2260
BstAUI	TGTACA	2 cut(s)	213, 1731
BstBI	TTCGAA	2 cut(s)	2431, 2737
BstC8I	GCNNGC	4 cut(s)	622, 775, 1547, 2972
BstDSI	CCRYGG	1 cut(s)	1132
BstF5I	GGATG	8 cut(s)	165, 752, 756, 1182, 1846, 2263, 2629, 2686
BstFNI	CGCG	1 cut(s)	1597
BstH2I	RGCGCY	1 cut(s)	852
BstHHI	GCGC	2 cut(s)	851, 1599
BstKTI	GATC	9 cut(s)	37, 553, 838, 871, 1265, 1504, 1744, 1966, 2220
BstMAI	GTCTC	8 cut(s)	211, 447, 480, 557, 1023, 1282, 2829, 2835
BstMBI	GATC	9 cut(s)	34, 550, 835, 868, 1262, 1501, 1741, 1963, 2217
BstMWI	GCNNNNNNNGC	9 cut(s)	857, 1196, 1771, 2045, 2048, 2076, 2251, 2260, 2930
BstNI	CCWGG	2 cut(s)	240, 950
BstNSI	RCATGY	6 cut(s)	1549, 1561, 2377, 2398, 2458, 2590
BstPAI	GACNNNNGTC	1 cut(s)	2513
BstSCI	CCNGG	4 cut(s)	238, 948, 2553, 2676
BstSFI	CTRYAG	1 cut(s)	2611
BstSLI	GKGCMC	1 cut(s)	1813
BstUI	CGCG	1 cut(s)	1597
BstV2I	GAAGAC	2 cut(s)	151, 678
BstX2I	RGATCY	2 cut(s)	550, 835
BstXI	CCANNNNNNTGG	3 cut(s)	1212, 1290, 2012
BstYI	RGATCY	2 cut(s)	550, 835
BstZ17I	GTATAC	2 cut(s)	1273, 2115
BsuI	GTATCC	2 cut(s)	1697, 2769
BsuRI	GGCC	9 cut(s)	243, 366, 718, 830, 1585, 1750, 1845, 1884, 2623
BtgI	CCRYGG	1 cut(s)	1132
BtsCI	GGATG	8 cut(s)	165, 752, 756, 1182, 1846, 2263, 2629, 2686
BtsI	GCAGTG	2 cut(s)	2328, 2441
BtsIMutI	CAGTG	7 cut(s)	1430, 1491, 1919, 2050, 2280, 2328, 2441
Cac8I	GCNNGC	4 cut(s)	622, 775, 1547, 2972
CaiI	CAGNNNCTG	1 cut(s)	1226
CciI	TCATGA	1 cut(s)	31
CfoI	GCGC	2 cut(s)	851, 1599
Cfr13I	GGNCC	1 cut(s)	2893
CseI	GACGC	1 cut(s)	1232
CsiI	ACCWGGT	1 cut(s)	948
DpnI	GATC	9 cut(s)	36, 552, 837, 870, 1264, 1503, 1743, 1965, 2219
DpnII	GATC	9 cut(s)	34, 550, 835, 868, 1262, 1501, 1741, 1963, 2217
EaeI	YGGCCR	4 cut(s)	241, 716, 1843, 1882
Eam1104I	CTCTTC	4 cut(s)	736, 1021, 1039, 1470
EarI	CTCTTC	4 cut(s)	736, 1021, 1039, 1470
Ecl136II	GAGCTC	1 cut(s)	2715
Eco130I	CCWWGG	4 cut(s)	253, 1266, 2008, 2957
Eco147I	AGGCCT	1 cut(s)	2623
Eco24I	GRGCYC	1 cut(s)	2717
Eco31I	GGTCTC	1 cut(s)	2835
Eco32I	GATATC	1 cut(s)	2647
Eco47I	GGWCC	1 cut(s)	2893
Eco53kI	GAGCTC	1 cut(s)	2715
Eco57I	CTGAAG	2 cut(s)	2685, 2983
Eco88I	CYCGRG	1 cut(s)	3015
EcoICRI	GAGCTC	1 cut(s)	2715
EcoRI	GAATTC	2 cut(s)	267, 1674
EcoRII	CCWGG	2 cut(s)	238, 948
EcoRV	GATATC	1 cut(s)	2647
EcoT14I	CCWWGG	4 cut(s)	253, 1266, 2008, 2957
EcoT22I	ATGCAT	2 cut(s)	1213, 2256
EcoT38I	GRGCYC	1 cut(s)	2717
ErhI	CCWWGG	4 cut(s)	253, 1266, 2008, 2957
Esp3I	CGTCTC	3 cut(s)	557, 1023, 1282
FalI	AAGNNNNNCTT	6 cut(s)	256, 288, 1607, 1639, 1806, 1838
FaqI	GGGAC	1 cut(s)	215
FauI	CCCGC	1 cut(s)	2355
FauNDI	CATATG	1 cut(s)	2640
FbaI	TGATCA	1 cut(s)	1741
FblI	GTMKAC	5 cut(s)	1236, 1272, 2114, 2286, 2583
FokI	GGATG	8 cut(s)	152, 759, 763, 1189, 1853, 2250, 2616, 2693
FriOI	GRGCYC	1 cut(s)	2717
FspBI	CTAG	9 cut(s)	66, 323, 386, 422, 992, 1715, 2180, 2207, 2625
GlaI	GCGC	2 cut(s)	850, 1598
GsaI	CCCAGC	3 cut(s)	849, 893, 1535
GsuI	CTGGAG	2 cut(s)	531, 2857
HaeII	RGCGCY	1 cut(s)	852
HaeIII	GGCC	9 cut(s)	243, 366, 718, 830, 1585, 1750, 1845, 1884, 2623
HapII	CCGG	4 cut(s)	938, 1088, 2555, 2678
HgaI	GACGC	1 cut(s)	1232
HhaI	GCGC	2 cut(s)	851, 1599
Hin6I	GCGC	2 cut(s)	849, 1597
HinP1I	GCGC	2 cut(s)	849, 1597
HincII	GTYRAC	1 cut(s)	2091
HindII	GTYRAC	1 cut(s)	2091
HindIII	AAGCTT	2 cut(s)	303, 2651
HpaII	CCGG	4 cut(s)	938, 1088, 2555, 2678
Hpy188I	TCNGA	9 cut(s)	394, 504, 1222, 1262, 1397, 1485, 2020, 2538, 2712
HpyCH4IV	ACGT	2 cut(s)	1275, 1982
HpyF10VI	GCNNNNNNNGC	9 cut(s)	857, 1196, 1771, 2045, 2048, 2076, 2251, 2260, 2930
HpySE526I	ACGT	2 cut(s)	1275, 1982
HspAI	GCGC	2 cut(s)	849, 1597
Kpn2I	TCCGGA	1 cut(s)	937
KpnI	GGTACC	2 cut(s)	1297, 2554
Ksp22I	TGATCA	1 cut(s)	1741
Kzo9I	GATC	9 cut(s)	34, 550, 835, 868, 1262, 1501, 1741, 1963, 2217
LguI	GCTCTTC	1 cut(s)	1470
LmnI	GCTCC	5 cut(s)	550, 728, 1108, 2400, 2412
LweI	GCATC	5 cut(s)	16, 1198, 1489, 1849, 2272
MabI	ACCWGGT	1 cut(s)	948
MaeI	CTAG	9 cut(s)	66, 323, 386, 422, 992, 1715, 2180, 2207, 2625
MaeII	ACGT	2 cut(s)	1275, 1982
MaeIII	GTNAC	5 cut(s)	577, 1489, 2439, 2792, 2902
MalI	GATC	9 cut(s)	36, 552, 837, 870, 1264, 1503, 1743, 1965, 2219
MboI	GATC	9 cut(s)	34, 550, 835, 868, 1262, 1501, 1741, 1963, 2217
MfeI	CAATTG	2 cut(s)	1999, 2491
MflI	RGATCY	2 cut(s)	550, 835
MhlI	GDGCHC	3 cut(s)	1128, 1813, 2717
MlsI	TGGCCA	2 cut(s)	718, 1884
MluCI	AATT	8 cut(s)	267, 1674, 1908, 1999, 2064, 2491, 2696, 2992
MluNI	TGGCCA	2 cut(s)	718, 1884
MlyI	GAGTC	4 cut(s)	237, 1515, 1695, 1933
MmeI	TCCRAC	4 cut(s)	343, 1360, 2200, 2594
Mox20I	TGGCCA	2 cut(s)	718, 1884
Mph1103I	ATGCAT	2 cut(s)	1213, 2256
MroI	TCCGGA	1 cut(s)	937
MroXI	GAANNNNTTC	1 cut(s)	2817
MscI	TGGCCA	2 cut(s)	718, 1884
MseI	TTAA	2 cut(s)	288, 1368
MslI	CAYNNNNRTG	7 cut(s)	629, 1131, 1556, 2010, 2395, 2600, 2679
Msp20I	TGGCCA	2 cut(s)	718, 1884
MspA1I	CMGCKG	4 cut(s)	1463, 1765, 2835, 2888
MspI	CCGG	4 cut(s)	938, 1088, 2555, 2678
MspR9I	CCNGG	4 cut(s)	240, 950, 2555, 2678
MunI	CAATTG	2 cut(s)	1999, 2491
Mva1269I	GAATGC	4 cut(s)	975, 1199, 1216, 2079
MvaI	CCWGG	2 cut(s)	240, 950
MvnI	CGCG	1 cut(s)	1597
MwoI	GCNNNNNNNGC	9 cut(s)	857, 1196, 1771, 2045, 2048, 2076, 2251, 2260, 2930
NciI	CCSGG	2 cut(s)	2555, 2678
NdeI	CATATG	1 cut(s)	2640
NdeII	GATC	9 cut(s)	34, 550, 835, 868, 1262, 1501, 1741, 1963, 2217
NlaIV	GGNNCC	5 cut(s)	146, 947, 1295, 2552, 2954
NmeAIII	GCCGAG	1 cut(s)	1871
NmuCI	GTSAC	4 cut(s)	1489, 2439, 2792, 2902
NsiI	ATGCAT	2 cut(s)	1213, 2256
NspI	RCATGY	6 cut(s)	1549, 1561, 2377, 2398, 2458, 2590
NspV	TTCGAA	2 cut(s)	2431, 2737
OliI	CACNNNNGTG	3 cut(s)	1131, 2010, 2395
PaeI	GCATGC	1 cut(s)	1549
PagI	TCATGA	1 cut(s)	31
PceI	AGGCCT	1 cut(s)	2623
PciI	ACATGT	4 cut(s)	1557, 2373, 2394, 2586
PciSI	GCTCTTC	1 cut(s)	1470
PctI	GAATGC	4 cut(s)	975, 1199, 1216, 2079
PdmI	GAANNNNTTC	1 cut(s)	2817
PflMI	CCANNNNNTGG	1 cut(s)	725
PleI	GAGTC	4 cut(s)	236, 1514, 1694, 1932
PpsI	GAGTC	4 cut(s)	236, 1514, 1694, 1932
PscI	ACATGT	4 cut(s)	1557, 2373, 2394, 2586
PshAI	GACNNNNGTC	1 cut(s)	2513
Psp124BI	GAGCTC	1 cut(s)	2717
Psp1406I	AACGTT	1 cut(s)	1982
Psp6I	CCWGG	2 cut(s)	238, 948
PspFI	CCCAGC	3 cut(s)	845, 889, 1531
PspGI	CCWGG	2 cut(s)	238, 948
PspN4I	GGNNCC	5 cut(s)	146, 947, 1295, 2552, 2954
PspPI	GGNCC	1 cut(s)	2893
PstNI	CAGNNNCTG	1 cut(s)	1226
PsuI	RGATCY	2 cut(s)	550, 835
PvuII	CAGCTG	4 cut(s)	1463, 1765, 2835, 2888
RseI	CAYNNNNRTG	7 cut(s)	629, 1131, 1556, 2010, 2395, 2600, 2679
SacI	GAGCTC	1 cut(s)	2717
SapI	GCTCTTC	1 cut(s)	1470
SaqAI	TTAA	2 cut(s)	288, 1368
Sau3AI	GATC	9 cut(s)	34, 550, 835, 868, 1262, 1501, 1741, 1963, 2217
Sau96I	GGNCC	1 cut(s)	2893
SchI	GAGTC	4 cut(s)	237, 1515, 1695, 1933
ScrFI	CCNGG	4 cut(s)	240, 950, 2555, 2678
SduI	GDGCHC	3 cut(s)	1128, 1813, 2717
SexAI	ACCWGGT	1 cut(s)	948
SfaNI	GCATC	5 cut(s)	16, 1198, 1489, 1849, 2272
SfcI	CTRYAG	1 cut(s)	2611
SfuI	TTCGAA	2 cut(s)	2431, 2737
SinI	GGWCC	1 cut(s)	2893
SmiMI	CAYNNNNRTG	7 cut(s)	629, 1131, 1556, 2010, 2395, 2600, 2679
SmlI	CTYRAG	7 cut(s)	683, 1121, 1320, 1610, 1658, 2716, 2947
SmoI	CTYRAG	7 cut(s)	683, 1121, 1320, 1610, 1658, 2716, 2947
SphI	GCATGC	1 cut(s)	1549
Sse9I	AATT	8 cut(s)	267, 1674, 1908, 1999, 2064, 2491, 2696, 2992
SseBI	AGGCCT	1 cut(s)	2623
SsiI	CCGC	6 cut(s)	858, 973, 1129, 1570, 2348, 2982
SspMI	CTAG	9 cut(s)	66, 323, 386, 422, 992, 1715, 2180, 2207, 2625
SstI	GAGCTC	1 cut(s)	2717
StuI	AGGCCT	1 cut(s)	2623
StyD4I	CCNGG	4 cut(s)	238, 948, 2553, 2676
StyI	CCWWGG	4 cut(s)	253, 1266, 2008, 2957
TaiI	ACGT	2 cut(s)	1278, 1985
TasI	AATT	8 cut(s)	267, 1674, 1908, 1999, 2064, 2491, 2696, 2992
TatI	WGTACW	6 cut(s)	213, 988, 1731, 1853, 2370, 2671
TauI	GCSGC	1 cut(s)	1573
Tru1I	TTAA	2 cut(s)	288, 1368
Tru9I	TTAA	2 cut(s)	288, 1368
TscAI	CASTG	7 cut(s)	1437, 1498, 1926, 2050, 2280, 2328, 2448
TseFI	GTSAC	4 cut(s)	1489, 2439, 2792, 2902
Tsp45I	GTSAC	4 cut(s)	1489, 2439, 2792, 2902
TspGWI	ACGGA	2 cut(s)	66, 750
TspRI	CASTG	7 cut(s)	1437, 1498, 1926, 2050, 2280, 2328, 2448
Van91I	CCANNNNNTGG	1 cut(s)	725
VneI	GTGCAC	1 cut(s)	1809
VpaK11BI	GGWCC	1 cut(s)	2893
XapI	RAATTY	3 cut(s)	267, 1674, 2696
XbaI	TCTAGA	1 cut(s)	1714
XceI	RCATGY	6 cut(s)	1549, 1561, 2377, 2398, 2458, 2590
XmiI	GTMKAC	5 cut(s)	1236, 1272, 2114, 2286, 2583
XmnI	GAANNNNTTC	1 cut(s)	2817
XspI	CTAG	9 cut(s)	66, 323, 386, 422, 992, 1715, 2180, 2207, 2625
Zsp2I	ATGCAT	2 cut(s)	1213, 2256

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.