MD07G1005400.v1.1

Multiple C2 and transmembrane domain-containing protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Reverse (-)
551812 .. 554924
3113 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1005400.v1.1.491

Sequence Viewer

Length: 3093 bp
ATGAAGCTGGTAGTAGAAGTGGTAGATGCTCATGGTCTTATGCCCAAAGACGGCGAAGGATCTGCAAGTCCATTTGTAGAAGTCGATTTTGTGAACAAGCTTAGCCGAACCAAAACCATTCCGAAAAATCTCAATCCCATCTGGAACCAGAAACTTTTCTTTGATATTGACCAAACCAGAAACTTCCATCACCAAACCATTGAAGTCTCTGTGTTCAACGAGAGGAGATCGCCTATTCCTGGCCGAAACTTCCTTGGAAGAGTGAGAATTCCTTGCTCGAACATTGTCCAGAAAAGTGAGGAAGCTTACCAAAGATTCCCTCTTGAAAACAAGTGGTTTTTCTCAGCTGTCAAGGGCGAGATTGGCCTAAAAGTCTATATTTCTCTAGAATCTGAACCGAAAGCTCCTCCATATTCTCCACCACAACTACTAGAAGCCTCTCCTTCCAAGTCTCAACCCCAGCCACCTGAAAACCCAACTTCTAGTCCCTCTGCTCCTCCAAATACAGAGAACACAAAATCCAATAGGAAAGTATTGGCTGCTATTCCGAAAGAAAAAGAGTTCAAACAAAAACAAGCTGAAGTAAGATCAACTGAAACATCCCACCACATACACAAGCATCAAGTTCTGCAGCAACCAGGCATATCGGTAGCAACACAACCTCAAGGTTTCCCACCAACCATGCAGCCAGCTCACTCAGAAGCTCATCATATTCATAACCAGCAAGGCGACGATGAATTGAAGGACACCAGCCCGCAACTTGGCGAAAGGTGGCCAAATGGTGGAGCCTACGGAGGAAGAGGATGGATGAGTGGTGGCGAAAGATTTACAAGCACTTATGACCTTGTTGAGCAGATGTTTTATCTGTATGTTCGAGTTGTTAAAGCCAAAGACCTCCCTCCCAGCTCCATTACTGGAAGCTGTGATCCTTACGTGGAAGTAAAGTTGGGGAACTACAAGGGAAGAACAAAGCATTTCGAGAGGAAAATGAACCCAGAGTGGAACCAGGTGTTTGCTTTCTCAAAAGACCGAATCCAGTCATCGGTGGTGGAAGTTTTTATCAAAGATAAAGAGATGATTGGAAGAGATGATTATCTTGGAAGGGTGGTTTTTGACTTGAATGAGGTTCCGACCAGAGTTCCGCCTGACAGCCCGCTTGCTCCTCAGTGGTACAGGCTGGAGCACCGCCGCGGGGAAGGAATGGTTAGAGGTGAGATCATGCTTGCAGTCTGGATGGGAACACAGGCTGACGAAGCATTTCCAGATGCATGGCATTCGGATGCTGCAGGCGTCTATGGTGAGGGTGTGTTTAATATTCGATCCAAGGTATATGTATCACCAAAACTTTGGTACCTGAGGGTGAATGTGATTGCAGCTCAGGATGTGCTGCCTAACGACAGAAGCCGCCTCCCAGAAGTCTTTGTCAAAGCTCAGGTTGGAAACCAAGTGCTCAGAACCAAGATATGCCCAAGTCGGACTGCGAATCCACTGTGGAATGAAGATTTAGTCTTTGTTGCAGCTGAGCCTTTTGAGGAGCAGCTGGTTGTTACAGTTGAAGATCGAGTCCACCCTTCGAAAGATGAGGTGTTGGGGAAGATAAGCATGCCAATTGATGCGTTTGAGAAGCGGCTTGACCACAGGCCAGTTCTTTCGCGCTGGTTCAATCTCGAGAAGTATGGATTTGGTGTGTTGGAGCCTGACAGGAGGAAGGAGCTCAAGTTTTCAAGCAGGATACACCTGAGAGTTTGTCTTGAAGGCGGATATCACGTGCTAGATGAGTCAACAATGTACATAAGCGATCAGAGGCCAACGGCGAGGCAGCTATGGAAGCAGCCTGTTGGGATTTTGGAAGTTGGTATTCTTAGTGCACAAGGCCTTCTTCCAATGAAGATGAAGGACGGCCGAGGGAGCACAGATCCTTATTGTGTGGCTAAGTACGGCCAGAAATGGGTTCGCACCAGAACAATTCTCGACACATTGAGTCCTAAATGGAATGAGCAATACACATGGGAAGTGTATGATCCCTGCACAGTGATCACACTGGGAGTTTTTGACAACTGCCACCTTGGTGGAGGTGAGAAGCAAACATCAACTGCACGTAACGGAGCAAGAGATTCGCGAATTGGGAAGGTGCGTATTCGATTATCAACACTTGAAGCTCATCGGATGTATACGCGTTCGTATCCTCTCCTAGTTCTGCAGCCTAATGGAGTAAAGAAAATGGGCGAGCTTCAACTAGCTGTTCGATTTACCACCCTCTCTATAGCTAACTTGATATATGTTTACGGGCAACCCTTGTTGCCAAAAATGCATTACTTGCATCCTTTCACAGTGAACCAAGTCGATAATCTACGATACCAAGCAATGAACATCGTAGCGGTAAGACTTGGCAGAGCTGAACCGCCTCTGAGAAAAGAAGTGGTGGAGTACATGCTAGATGTTGATTCCCACATGTGGAGCATGAGGAGAAGCAAGGCCAACTTCTTTCGAATTATGTCATTGCTTTCTGGTATATTTTCCATGAACCGGTGGTTTGCTGATGTATGCAACTGGAAGAACTCCGTGACCACTGTTCTTGTTCACATTCTCTTTCTGATACTGATCTGGTATCCAGAGTTGATACTTCCAACTCTTTTTGTCTACATGTTCCTCATCGGAATGTGGAACTACAGGTTCAGGCCTAGACATCCTCCTCATATGGATACCAAGCTTTCATGGGCAGAGACAGTTCACCCAGACGAGCTCGATGAAGAGTTTGACACATTTCCGAGCTCTAGACCCCACGATATAGTTCGAATGAGGTACGACCGGATCAGAAGCGTAGCGGGAAGGATACAGACAGTTGTCGGTGACATAGCAACTCAAGGGGAGAGATTTCAGTCGCTACTCAGCTGGAGAGACCCAAGAGCAACCAGCATTTTCATACTGTTCTGTCTTTGTGCAGCTGTGGTGCTTTACGTGACTCCGTTCAGGGTGGTTTCTTTGGTTGCAGGGTTGTATTACTTGAGGCACCCCAGATTCCGGAGCAAGCTGCCTTCTGCACCCTGCAATTTCTTCAAGAGACTTCCCGCTCGGACCGACAGCTTACTATGA

Protein Analysis

1031

Amino Acids

118.22

Weight (kDa)

9.25

Isoelectric Point (pI)

50.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2 PF00168 2 - 105 2.1e-19 C2 domain
C2 PF00168 288 - 393 5e-22 C2 domain
C2 PF00168 450 - 556 1.7e-19 C2 domain
C2 PF00168 614 - 730 9.7e-21 C2 domain
PRT_C PF08372 875 - 1030 1.3e-81 Plant phosphoribosyltransferase C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012714)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1350
AccB1I GGYRCC 2 cut(s) 1350, 3009
AccB7I CCANNNNNTGG 1 cut(s) 782
AccBSI CCGCTC 1 cut(s) 3071
AccI GTMKAC 2 cut(s) 2171, 2640
AccII CGCG 4 cut(s) 1191, 1654, 2119, 2176
AccIII TCCGGA 1 cut(s) 3021
AclWI GGATC 6 cut(s) 67, 920, 1314, 1910, 2015, 2819
AcoI YGGCCR 4 cut(s) 241, 773, 1900, 1939
AcsI RAATTY 1 cut(s) 267
AcuI CTGAAG 1 cut(s) 600
AcvI CACGTG 1 cut(s) 1768
AcyI GRCGYC 1 cut(s) 1290
AfaI GTAC 6 cut(s) 1172, 1352, 1790, 1937, 2429, 2804
AflIII ACRYGT 3 cut(s) 2174, 2451, 2643
AgeI ACCGGT 1 cut(s) 2526
AjnI CCWGG 3 cut(s) 238, 637, 1005
AleI CACNNNNGTG 1 cut(s) 2067
AloI GAACNNNNNNTCC 2 cut(s) 503, 535
Alw21I GWGCWC 7 cut(s) 1185, 1452, 1716, 1870, 1913, 2745, 2774
Alw26I GTCTC 5 cut(s) 211, 456, 2717, 2892, 3055
Alw44I GTGCAC 1 cut(s) 1866
AlwI GGATC 6 cut(s) 67, 920, 1314, 1910, 2015, 2819
Ama87I CYCGRG 1 cut(s) 1667
Aor13HI TCCGGA 1 cut(s) 3021
ApaLI GTGCAC 1 cut(s) 1866
ApoI RAATTY 1 cut(s) 267
AsiGI ACCGGT 1 cut(s) 2526
Asp700I GAANNNNTTC 2 cut(s) 155, 1257
Asp718I GGTACC 1 cut(s) 1350
AspLEI GCGC 1 cut(s) 1656
AspS9I GGNCC 1 cut(s) 3075
AsuHPI GGTGA 8 cut(s) 182, 1223, 1310, 1329, 1372, 2087, 2723, 2861
AsuII TTCGAA 3 cut(s) 1574, 2488, 2794
AvaI CYCGRG 1 cut(s) 1667
AvaII GGWCC 1 cut(s) 3075
AxyI CCTNAGG 1 cut(s) 1355
BaeGI GKGCMC 1 cut(s) 1870
BaeI ACNNNNGTAYC 2 cut(s) 1334, 1367
BalI TGGCCA 1 cut(s) 775
BanI GGYRCC 2 cut(s) 1350, 3009
BanII GRGCYC 3 cut(s) 1716, 2745, 2774
BbrPI CACGTG 1 cut(s) 1768
Bbv12I GWGCWC 7 cut(s) 1185, 1452, 1716, 1870, 1913, 2745, 2774
BccI CCATC 4 cut(s) 146, 195, 798, 1228
BceAI ACGGC 4 cut(s) 67, 1827, 1915, 1954
BcgI CGANNNNNNTGC 6 cut(s) 44, 78, 1257, 1291, 2097, 2131
BciT130I CCWGG 3 cut(s) 240, 639, 1007
BciVI GTATCC 5 cut(s) 1725, 2193, 2619, 2695, 2826
BclI TGATCA 1 cut(s) 2034
BcoDI GTCTC 5 cut(s) 211, 456, 2717, 2892, 3055
BfaI CTAG 9 cut(s) 386, 431, 483, 1772, 2192, 2237, 2435, 2682, 2775
BfmI CTRYAG 5 cut(s) 629, 1284, 2198, 2262, 2668
BfuI GTATCC 5 cut(s) 1725, 2193, 2619, 2695, 2826
BlpI GCTNAGC 2 cut(s) 101, 1521
Bme1390I CCNGG 3 cut(s) 240, 639, 1007
Bme18I GGWCC 1 cut(s) 3075
BmeT110I CYCGRG 1 cut(s) 1667
BmgT120I GGNCC 1 cut(s) 3075
BmiI GGNNCC 7 cut(s) 146, 787, 1004, 1128, 1352, 1695, 3011
BmrFI CCNGG 3 cut(s) 240, 639, 1007
BmrI ACTGGG 1 cut(s) 2051
BmsI GCATC 6 cut(s) 16, 628, 1255, 1270, 1603, 2329
BmuI ACTGGG 1 cut(s) 2051
BoxI GACNNNNGTC 1 cut(s) 2843
BpmI CTGGAG 2 cut(s) 1199, 2914
Bpu10I CCTNAGC 2 cut(s) 1377, 1431
Bpu1102I GCTNAGC 2 cut(s) 101, 1521
Bpu14I TTCGAA 3 cut(s) 1574, 2488, 2794
BpuEI CTTGAG 4 cut(s) 648, 1700, 2847, 3025
BsaAI YACGTR 4 cut(s) 934, 1768, 2099, 2959
BsaBI GATNNNNATC 2 cut(s) 1092, 2600
BsaHI GRCGYC 1 cut(s) 1290
BsaI GGTCTC 1 cut(s) 2892
BsaJI CCNNGG 5 cut(s) 253, 1189, 1323, 1903, 2065
BsaWI WCCGGW 3 cut(s) 2526, 2808, 3021
BsaXI ACNNNNNCTCC 2 cut(s) 1703, 1733
Bse118I RCCGGY 1 cut(s) 2526
Bse1I ACTGG 5 cut(s) 919, 1036, 1643, 2046, 2555
Bse21I CCTNAGG 1 cut(s) 1355
Bse3DI GCAATG 2 cut(s) 2370, 2498
Bse8I GATNNNNATC 2 cut(s) 1092, 2600
BseAI TCCGGA 1 cut(s) 3021
BseBI CCWGG 3 cut(s) 240, 639, 1007
BseDI CCNNGG 5 cut(s) 253, 1189, 1323, 1903, 2065
BseGI GGATG 9 cut(s) 599, 809, 813, 1239, 1285, 1387, 2172, 2320, 2686
BseJI GATNNNNATC 2 cut(s) 1092, 2600
BseMI GCAATG 2 cut(s) 2370, 2498
BseNI ACTGG 5 cut(s) 919, 1036, 1643, 2046, 2555
BseRI GAGGAG 7 cut(s) 238, 396, 486, 1152, 1547, 2479, 2682
BseSI GKGCMC 1 cut(s) 1870
BseX3I CGGCCG 1 cut(s) 1900
BseYI CCCAGC 2 cut(s) 459, 902
BsgI GTGCAG 4 cut(s) 2011, 2079, 2961, 3024
Bsh1236I CGCG 4 cut(s) 1191, 1654, 2119, 2176
Bsh1285I CGRYCG 2 cut(s) 1903, 2809
BshNI GGYRCC 2 cut(s) 1350, 3009
BshTI ACCGGT 1 cut(s) 2526
BsiEI CGRYCG 2 cut(s) 1903, 2809
BsiHKAI GWGCWC 7 cut(s) 1185, 1452, 1716, 1870, 1913, 2745, 2774
BsiHKCI CYCGRG 1 cut(s) 1667
BsiSI CCGG 3 cut(s) 2527, 2809, 3022
BslFI GGGAC 1 cut(s) 471
BsmAI GTCTC 5 cut(s) 211, 456, 2717, 2892, 3055
BsmFI GGGAC 1 cut(s) 471
BsmI GAATGC 1 cut(s) 1273
Bso31I GGTCTC 1 cut(s) 2892
BsoBI CYCGRG 1 cut(s) 1667
Bsp119I TTCGAA 3 cut(s) 1574, 2488, 2794
Bsp1286I GDGCHC 7 cut(s) 1185, 1452, 1716, 1870, 1913, 2745, 2774
Bsp13I TCCGGA 1 cut(s) 3021
Bsp1407I TGTACA 1 cut(s) 1788
Bsp1720I GCTNAGC 2 cut(s) 101, 1521
Bsp68I TCGCGA 1 cut(s) 2119
BspEI TCCGGA 1 cut(s) 3021
BspFNI CGCG 4 cut(s) 1191, 1654, 2119, 2176
BspLI GGNNCC 7 cut(s) 146, 787, 1004, 1128, 1352, 1695, 3011
BspMAI CTGCAG 3 cut(s) 633, 1288, 2202
BspPI GGATC 6 cut(s) 67, 920, 1314, 1910, 2015, 2819
BspT104I TTCGAA 3 cut(s) 1574, 2488, 2794
BspT107I GGYRCC 2 cut(s) 1350, 3009
BspTNI GGTCTC 1 cut(s) 2892
BsrBI CCGCTC 1 cut(s) 3071
BsrDI GCAATG 2 cut(s) 2370, 2498
BsrFI RCCGGY 1 cut(s) 2526
BsrGI TGTACA 1 cut(s) 1788
BsrI ACTGG 5 cut(s) 919, 1036, 1643, 2046, 2555
BssAI RCCGGY 1 cut(s) 2526
BssECI CCNNGG 5 cut(s) 253, 1189, 1323, 1903, 2065
BssNAI GTATAC 1 cut(s) 2172
BssNI GRCGYC 1 cut(s) 1290
BssT1I CCWWGG 3 cut(s) 253, 1323, 2065
Bst1107I GTATAC 1 cut(s) 2172
Bst2UI CCWGG 3 cut(s) 240, 639, 1007
Bst4CI ACNGT 8 cut(s) 1491, 1552, 2032, 2332, 2572, 2728, 2842, 2928
Bst6I CTCTTC 4 cut(s) 253, 793, 1078, 2745
BstACI GRCGYC 1 cut(s) 1290
BstAPI GCANNNNNTGC 1 cut(s) 2317
BstAUI TGTACA 1 cut(s) 1788
BstBAI YACGTR 4 cut(s) 934, 1768, 2099, 2959
BstBI TTCGAA 3 cut(s) 1574, 2488, 2794
BstC8I GCNNGC 9 cut(s) 690, 755, 1154, 1158, 1224, 1288, 1604, 2228, 3029
BstDSI CCRYGG 1 cut(s) 1189
BstF5I GGATG 9 cut(s) 599, 809, 813, 1239, 1285, 1387, 2172, 2320, 2686
BstFNI CGCG 4 cut(s) 1191, 1654, 2119, 2176
BstHHI GCGC 1 cut(s) 1656
BstMAI GTCTC 5 cut(s) 211, 456, 2717, 2892, 3055
BstMCI CGRYCG 2 cut(s) 1903, 2809
BstMWI GCNNNNNNNGC 6 cut(s) 363, 1253, 1828, 1908, 2308, 2317
BstNI CCWGG 3 cut(s) 240, 639, 1007
BstNSI RCATGY 4 cut(s) 1606, 2434, 2455, 2647
BstPAI GACNNNNGTC 1 cut(s) 2843
BstSCI CCNGG 3 cut(s) 238, 637, 1005
BstSFI CTRYAG 5 cut(s) 629, 1284, 2198, 2262, 2668
BstSLI GKGCMC 1 cut(s) 1870
BstUI CGCG 4 cut(s) 1191, 1654, 2119, 2176
BstX2I RGATCY 2 cut(s) 59, 1915
BstXI CCANNNNNNTGG 3 cut(s) 1269, 1347, 2069
BstYI RGATCY 2 cut(s) 59, 1915
BstZ17I GTATAC 1 cut(s) 2172
BstZI CGGCCG 1 cut(s) 1900
Bsu36I CCTNAGG 1 cut(s) 1355
BsuI GTATCC 5 cut(s) 1725, 2193, 2619, 2695, 2826
BtgI CCRYGG 1 cut(s) 1189
BtsCI GGATG 9 cut(s) 599, 809, 813, 1239, 1285, 1387, 2172, 2320, 2686
BtsIMutI CAGTG 6 cut(s) 1172, 1487, 2037, 2039, 2337, 2568
BtuMI TCGCGA 1 cut(s) 2119
Cac8I GCNNGC 9 cut(s) 690, 755, 1154, 1158, 1224, 1288, 1604, 2228, 3029
CfoI GCGC 1 cut(s) 1656
Cfr10I RCCGGY 1 cut(s) 2526
Cfr13I GGNCC 1 cut(s) 3075
Cfr42I CCGCGG 1 cut(s) 1192
CpoI CGGWCCG 1 cut(s) 3075
CseI GACGC 1 cut(s) 1279
CsiI ACCWGGT 1 cut(s) 1005
Csp6I GTAC 6 cut(s) 1171, 1351, 1789, 1936, 2428, 2803
CspAI ACCGGT 1 cut(s) 2526
CspCI CAANNNNNGTGG 2 cut(s) 2557, 2592
CspI CGGWCCG 1 cut(s) 3075
CviQI GTAC 6 cut(s) 1171, 1351, 1789, 1936, 2428, 2803
EaeI YGGCCR 4 cut(s) 241, 773, 1900, 1939
EagI CGGCCG 1 cut(s) 1900
Eam1104I CTCTTC 4 cut(s) 253, 793, 1078, 2745
EarI CTCTTC 4 cut(s) 253, 793, 1078, 2745
EciI GGCGGA 2 cut(s) 1131, 1773
Ecl136II GAGCTC 3 cut(s) 1714, 2743, 2772
EclXI CGGCCG 1 cut(s) 1900
Eco130I CCWWGG 3 cut(s) 253, 1323, 2065
Eco147I AGGCCT 2 cut(s) 1875, 2680
Eco24I GRGCYC 3 cut(s) 1716, 2745, 2774
Eco31I GGTCTC 1 cut(s) 2892
Eco32I GATATC 1 cut(s) 1763
Eco47I GGWCC 1 cut(s) 3075
Eco52I CGGCCG 1 cut(s) 1900
Eco53kI GAGCTC 3 cut(s) 1714, 2743, 2772
Eco57I CTGAAG 1 cut(s) 600
Eco72I CACGTG 1 cut(s) 1768
Eco81I CCTNAGG 1 cut(s) 1355
Eco88I CYCGRG 1 cut(s) 1667
EcoICRI GAGCTC 3 cut(s) 1714, 2743, 2772
EcoRI GAATTC 1 cut(s) 267
EcoRII CCWGG 3 cut(s) 238, 637, 1005
EcoRV GATATC 1 cut(s) 1763
EcoT14I CCWWGG 3 cut(s) 253, 1323, 2065
EcoT22I ATGCAT 2 cut(s) 1270, 2313
EcoT38I GRGCYC 3 cut(s) 1716, 2745, 2774
ErhI CCWWGG 3 cut(s) 253, 1323, 2065
FalI AAGNNNNNCTT 4 cut(s) 1863, 1895, 2465, 2497
FaqI GGGAC 1 cut(s) 471
FauI CCCGC 5 cut(s) 762, 1161, 1184, 2818, 3076
FauNDI CATATG 1 cut(s) 2697
FbaI TGATCA 1 cut(s) 2034
FblI GTMKAC 2 cut(s) 2171, 2640
FokI GGATG 9 cut(s) 586, 816, 820, 1246, 1292, 1394, 2179, 2307, 2673
FriOI GRGCYC 3 cut(s) 1716, 2745, 2774
FspBI CTAG 9 cut(s) 386, 431, 483, 1772, 2192, 2237, 2435, 2682, 2775
GlaI GCGC 1 cut(s) 1655
GsaI CCCAGC 2 cut(s) 463, 906
GsuI CTGGAG 2 cut(s) 1199, 2914
HapII CCGG 3 cut(s) 2527, 2809, 3022
HgaI GACGC 1 cut(s) 1279
HhaI GCGC 1 cut(s) 1656
Hin1I GRCGYC 1 cut(s) 1290
Hin6I GCGC 1 cut(s) 1654
HinP1I GCGC 1 cut(s) 1654
HincII GTYRAC 1 cut(s) 1782
HindII GTYRAC 1 cut(s) 1782
HindIII AAGCTT 3 cut(s) 98, 303, 2708
HpaII CCGG 3 cut(s) 2527, 2809, 3022
HphI GGTGA 8 cut(s) 182, 1223, 1310, 1329, 1372, 2087, 2723, 2861
Hpy99I CGWCG 1 cut(s) 734
HpyCH4III ACNGT 8 cut(s) 1491, 1552, 2032, 2332, 2572, 2728, 2842, 2928
HpyCH4IV ACGT 4 cut(s) 933, 1767, 2098, 2958
HpyF10VI GCNNNNNNNGC 6 cut(s) 363, 1253, 1828, 1908, 2308, 2317
HpySE526I ACGT 4 cut(s) 933, 1767, 2098, 2958
Hsp92I GRCGYC 1 cut(s) 1290
HspAI GCGC 1 cut(s) 1654
Kpn2I TCCGGA 1 cut(s) 3021
KpnI GGTACC 1 cut(s) 1354
Ksp22I TGATCA 1 cut(s) 2034
KspI CCGCGG 1 cut(s) 1192
LweI GCATC 6 cut(s) 16, 628, 1255, 1270, 1603, 2329
MabI ACCWGGT 1 cut(s) 1005
MaeI CTAG 9 cut(s) 386, 431, 483, 1772, 2192, 2237, 2435, 2682, 2775
MaeII ACGT 4 cut(s) 933, 1767, 2098, 2958
MaeIII GTNAC 5 cut(s) 1546, 2099, 2563, 2849, 2959
MbiI CCGCTC 1 cut(s) 3071
MfeI CAATTG 1 cut(s) 1608
MflI RGATCY 2 cut(s) 59, 1915
MhlI GDGCHC 7 cut(s) 1185, 1452, 1716, 1870, 1913, 2745, 2774
MlsI TGGCCA 1 cut(s) 775
MluCI AATT 7 cut(s) 267, 737, 1608, 1965, 2121, 2490, 3049
MluI ACGCGT 1 cut(s) 2174
MluNI TGGCCA 1 cut(s) 775
MlyI GAGTC 4 cut(s) 1572, 1787, 1990, 2956
MmeI TCCRAC 5 cut(s) 1154, 1417, 1454, 1671, 2651
Mox20I TGGCCA 1 cut(s) 775
Mph1103I ATGCAT 2 cut(s) 1270, 2313
MroI TCCGGA 1 cut(s) 3021
MroXI GAANNNNTTC 2 cut(s) 155, 1257
MscI TGGCCA 1 cut(s) 775
MseI TTAA 2 cut(s) 882, 1311
MslI CAYNNNNRTG 3 cut(s) 1278, 2067, 2657
Msp20I TGGCCA 1 cut(s) 775
MspA1I CMGCKG 6 cut(s) 347, 1191, 1520, 1540, 2892, 2945
MspI CCGG 3 cut(s) 2527, 2809, 3022
MspR9I CCNGG 3 cut(s) 240, 639, 1007
MunI CAATTG 1 cut(s) 1608
Mva1269I GAATGC 1 cut(s) 1273
MvaI CCWGG 3 cut(s) 240, 639, 1007
MvnI CGCG 4 cut(s) 1191, 1654, 2119, 2176
MwoI GCNNNNNNNGC 6 cut(s) 363, 1253, 1828, 1908, 2308, 2317
NdeI CATATG 1 cut(s) 2697
NlaIV GGNNCC 7 cut(s) 146, 787, 1004, 1128, 1352, 1695, 3011
NmeAIII GCCGAG 1 cut(s) 1928
NmuCI GTSAC 3 cut(s) 2563, 2849, 2959
NruI TCGCGA 1 cut(s) 2119
NsiI ATGCAT 2 cut(s) 1270, 2313
NspI RCATGY 4 cut(s) 1606, 2434, 2455, 2647
NspV TTCGAA 3 cut(s) 1574, 2488, 2794
OliI CACNNNNGTG 1 cut(s) 2067
PaeI GCATGC 1 cut(s) 1606
PaeR7I CTCGAG 1 cut(s) 1667
PceI AGGCCT 2 cut(s) 1875, 2680
PciI ACATGT 2 cut(s) 2451, 2643
PctI GAATGC 1 cut(s) 1273
PdmI GAANNNNTTC 2 cut(s) 155, 1257
PfeI GAWTC 7 cut(s) 315, 389, 1032, 1483, 2114, 2444, 3018
PflMI CCANNNNNTGG 1 cut(s) 782
PinAI ACCGGT 1 cut(s) 2526
PleI GAGTC 4 cut(s) 1571, 1786, 1989, 2956
PmaCI CACGTG 1 cut(s) 1768
PmlI CACGTG 1 cut(s) 1768
PpsI GAGTC 4 cut(s) 1571, 1786, 1989, 2956
Ppu21I YACGTR 4 cut(s) 934, 1768, 2099, 2959
PscI ACATGT 2 cut(s) 2451, 2643
PshAI GACNNNNGTC 1 cut(s) 2843
Psp124BI GAGCTC 3 cut(s) 1716, 2745, 2774
Psp6I CCWGG 3 cut(s) 238, 637, 1005
PspCI CACGTG 1 cut(s) 1768
PspFI CCCAGC 2 cut(s) 459, 902
PspGI CCWGG 3 cut(s) 238, 637, 1005
PspN4I GGNNCC 7 cut(s) 146, 787, 1004, 1128, 1352, 1695, 3011
PspPI GGNCC 1 cut(s) 3075
PstI CTGCAG 3 cut(s) 633, 1288, 2202
PsuI RGATCY 2 cut(s) 59, 1915
PvuII CAGCTG 5 cut(s) 347, 1520, 1540, 2892, 2945
RruI TCGCGA 1 cut(s) 2119
RsaI GTAC 6 cut(s) 1172, 1352, 1790, 1937, 2429, 2804
RsaNI GTAC 6 cut(s) 1171, 1351, 1789, 1936, 2428, 2803
RseI CAYNNNNRTG 3 cut(s) 1278, 2067, 2657
Rsr2I CGGWCCG 1 cut(s) 3075
RsrII CGGWCCG 1 cut(s) 3075
SacI GAGCTC 3 cut(s) 1716, 2745, 2774
SacII CCGCGG 1 cut(s) 1192
SaqAI TTAA 2 cut(s) 882, 1311
Sau96I GGNCC 1 cut(s) 3075
SchI GAGTC 4 cut(s) 1572, 1787, 1990, 2956
ScrFI CCNGG 3 cut(s) 240, 639, 1007
SduI GDGCHC 7 cut(s) 1185, 1452, 1716, 1870, 1913, 2745, 2774
SexAI ACCWGGT 1 cut(s) 1005
SfaNI GCATC 6 cut(s) 16, 628, 1255, 1270, 1603, 2329
SfcI CTRYAG 5 cut(s) 629, 1284, 2198, 2262, 2668
Sfr274I CTCGAG 1 cut(s) 1667
Sfr303I CCGCGG 1 cut(s) 1192
SfuI TTCGAA 3 cut(s) 1574, 2488, 2794
SgrBI CCGCGG 1 cut(s) 1192
SinI GGWCC 1 cut(s) 3075
SlaI CTCGAG 1 cut(s) 1667
SmiMI CAYNNNNRTG 3 cut(s) 1278, 2067, 2657
SmlI CTYRAG 5 cut(s) 663, 1667, 1715, 2862, 3004
SmoI CTYRAG 5 cut(s) 663, 1667, 1715, 2862, 3004
SphI GCATGC 1 cut(s) 1606
Sse9I AATT 7 cut(s) 267, 737, 1608, 1965, 2121, 2490, 3049
SseBI AGGCCT 2 cut(s) 1875, 2680
SspI AATATT 1 cut(s) 1315
SspMI CTAG 9 cut(s) 386, 431, 483, 1772, 2192, 2237, 2435, 2682, 2775
SstI GAGCTC 3 cut(s) 1716, 2745, 2774
StuI AGGCCT 2 cut(s) 1875, 2680
StyD4I CCNGG 3 cut(s) 238, 637, 1005
StyI CCWWGG 3 cut(s) 253, 1323, 2065
TaaI ACNGT 8 cut(s) 1491, 1552, 2032, 2332, 2572, 2728, 2842, 2928
TaiI ACGT 4 cut(s) 936, 1770, 2101, 2961
TaqII GACCGA 2 cut(s) 1044, 3092
TasI AATT 7 cut(s) 267, 737, 1608, 1965, 2121, 2490, 3049
TatI WGTACW 2 cut(s) 1788, 2427
TauI GCSGC 3 cut(s) 1191, 1407, 1630
TfiI GAWTC 7 cut(s) 315, 389, 1032, 1483, 2114, 2444, 3018
Tru1I TTAA 2 cut(s) 882, 1311
Tru9I TTAA 2 cut(s) 882, 1311
TscAI CASTG 6 cut(s) 1172, 1494, 2037, 2046, 2337, 2575
TseFI GTSAC 3 cut(s) 2563, 2849, 2959
Tsp45I GTSAC 3 cut(s) 2563, 2849, 2959
TspGWI ACGGA 4 cut(s) 807, 2118, 2551, 2955
TspRI CASTG 6 cut(s) 1172, 1494, 2037, 2046, 2337, 2575
Van91I CCANNNNNTGG 1 cut(s) 782
VneI GTGCAC 1 cut(s) 1866
VpaK11BI GGWCC 1 cut(s) 3075
XapI RAATTY 1 cut(s) 267
XbaI TCTAGA 2 cut(s) 385, 2774
XceI RCATGY 4 cut(s) 1606, 2434, 2455, 2647
XhoI CTCGAG 1 cut(s) 1667
XmiI GTMKAC 2 cut(s) 2171, 2640
XmnI GAANNNNTTC 2 cut(s) 155, 1257
XspI CTAG 9 cut(s) 386, 431, 483, 1772, 2192, 2237, 2435, 2682, 2775
Zsp2I ATGCAT 2 cut(s) 1270, 2313
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.